HEADER NUCLEAR PROTEIN 21-MAR-20 7BP2 TITLE STRUCTURAL MECHANISM DIRECTING NUCLEOSOME REORGANIZATION BY NAP1- TITLE 2 RELATED PROTEIN 1 (NRP1) COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE H2A.6; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: HTA1,PROTEIN RESISTANT TO AGROBACTERIUM TRANSFORMATION 5; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: HISTONE H2B.1; COMPND 8 CHAIN: B, D; COMPND 9 SYNONYM: HTB1; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: RAT5, H2A-1, AT5G54640, MRB17.14; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 11 ORGANISM_COMMON: MOUSE-EAR CRESS; SOURCE 12 ORGANISM_TAXID: 3702; SOURCE 13 GENE: AT1G07790, F24B9.10; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS COMPLEX, HISTONE, PLANT PROTEIN, NUCLEAR PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Q.LUO,W.BAIHUI REVDAT 5 29-NOV-23 7BP2 1 REMARK REVDAT 4 16-DEC-20 7BP2 1 JRNL REVDAT 3 02-DEC-20 7BP2 1 JRNL REVDAT 2 25-NOV-20 7BP2 1 JRNL REVDAT 1 11-NOV-20 7BP2 0 JRNL AUTH Q.LUO,B.WANG,Z.WU,W.JIANG,Y.WANG,K.DU,N.ZHOU,L.ZHENG,J.GAN, JRNL AUTH 2 W.H.SHEN,J.MA,A.DONG JRNL TITL NAP1-RELATED PROTEIN 1 (NRP1) HAS MULTIPLE INTERACTION MODES JRNL TITL 2 FOR CHAPERONING HISTONES H2A-H2B. JRNL REF PROC.NATL.ACAD.SCI.USA V. 117 30391 2020 JRNL REFN ESSN 1091-6490 JRNL PMID 33199628 JRNL DOI 10.1073/PNAS.2011089117 REMARK 2 REMARK 2 RESOLUTION. 1.58 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0253 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.58 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.45 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 60749 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.156 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.186 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 3127 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.58 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.62 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4409 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.1860 REMARK 3 BIN FREE R VALUE SET COUNT : 221 REMARK 3 BIN FREE R VALUE : 0.2090 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2722 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 74 REMARK 3 SOLVENT ATOMS : 392 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.96 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.32000 REMARK 3 B22 (A**2) : -0.32000 REMARK 3 B33 (A**2) : 0.65000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.013 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.015 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.035 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.936 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2820 ; 0.018 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 2797 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3794 ; 1.295 ; 1.643 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6463 ; 1.274 ; 1.582 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 348 ; 5.884 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 129 ;35.334 ;20.853 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 521 ;14.200 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;20.096 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 374 ; 0.091 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3016 ; 0.020 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 566 ; 0.013 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 2 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.514 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : K, H, -L REMARK 3 TWIN FRACTION : 0.486 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7BP2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-MAR-20. REMARK 100 THE DEPOSITION ID IS D_1300016231. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JAN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97853 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 64079 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.580 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 8.700 REMARK 200 R MERGE (I) : 0.04900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.58 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 0.29900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: 1AOI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M SODIUM SULPHATE 0.1M BIS TRIS REMARK 280 PROPANE PH 7.5 20% W/V PEG 3350, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 32.22900 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 64.45800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -110.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -105.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 12 REMARK 465 LYS A 13 REMARK 465 ALA A 14 REMARK 465 ILE A 102 REMARK 465 ALA A 103 REMARK 465 ASN A 104 REMARK 465 LYS B 27 REMARK 465 LYS B 28 REMARK 465 ARG B 29 REMARK 465 SER B 30 REMARK 465 LYS B 31 REMARK 465 LYS B 32 REMARK 465 ASN B 33 REMARK 465 SER B 124 REMARK 465 LYS C 12 REMARK 465 LYS C 13 REMARK 465 ALA C 14 REMARK 465 ILE C 102 REMARK 465 ALA C 103 REMARK 465 ASN C 104 REMARK 465 LYS D 27 REMARK 465 LYS D 28 REMARK 465 ARG D 29 REMARK 465 SER D 30 REMARK 465 LYS D 31 REMARK 465 LYS D 32 REMARK 465 ASN D 33 REMARK 465 VAL D 34 REMARK 465 GLU D 35 REMARK 465 SER D 124 REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH D 405 DISTANCE = 6.03 ANGSTROMS REMARK 525 HOH D 406 DISTANCE = 6.43 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 D 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 D 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 D 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL D 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL D 205 DBREF 7BP2 A 12 104 UNP Q9LD28 H2A6_ARATH 14 106 DBREF 7BP2 B 27 124 UNP Q9LQQ4 H2B1_ARATH 51 148 DBREF 7BP2 C 12 104 UNP Q9LD28 H2A6_ARATH 14 106 DBREF 7BP2 D 27 124 UNP Q9LQQ4 H2B1_ARATH 51 148 SEQRES 1 A 93 LYS LYS ALA THR SER ARG SER SER LYS ALA GLY LEU GLN SEQRES 2 A 93 PHE PRO VAL GLY ARG ILE ALA ARG PHE LEU LYS ALA GLY SEQRES 3 A 93 LYS TYR ALA GLU ARG VAL GLY ALA GLY ALA PRO VAL TYR SEQRES 4 A 93 LEU ALA ALA VAL LEU GLU TYR LEU ALA ALA GLU VAL LEU SEQRES 5 A 93 GLU LEU ALA GLY ASN ALA ALA ARG ASP ASN LYS LYS THR SEQRES 6 A 93 ARG ILE VAL PRO ARG HIS ILE GLN LEU ALA VAL ARG ASN SEQRES 7 A 93 ASP GLU GLU LEU SER LYS LEU LEU GLY ASP VAL THR ILE SEQRES 8 A 93 ALA ASN SEQRES 1 B 98 LYS LYS ARG SER LYS LYS ASN VAL GLU THR TYR LYS ILE SEQRES 2 B 98 TYR ILE PHE LYS VAL LEU LYS GLN VAL HIS PRO ASP ILE SEQRES 3 B 98 GLY ILE SER SER LYS ALA MET GLY ILE MET ASN SER PHE SEQRES 4 B 98 ILE ASN ASP ILE PHE GLU LYS LEU ALA GLN GLU SER SER SEQRES 5 B 98 LYS LEU ALA ARG TYR ASN LYS LYS PRO THR ILE THR SER SEQRES 6 B 98 ARG GLU ILE GLN THR ALA VAL ARG LEU VAL LEU PRO GLY SEQRES 7 B 98 GLU LEU ALA LYS HIS ALA VAL SER GLU GLY THR LYS ALA SEQRES 8 B 98 VAL THR LYS PHE THR SER SER SEQRES 1 C 93 LYS LYS ALA THR SER ARG SER SER LYS ALA GLY LEU GLN SEQRES 2 C 93 PHE PRO VAL GLY ARG ILE ALA ARG PHE LEU LYS ALA GLY SEQRES 3 C 93 LYS TYR ALA GLU ARG VAL GLY ALA GLY ALA PRO VAL TYR SEQRES 4 C 93 LEU ALA ALA VAL LEU GLU TYR LEU ALA ALA GLU VAL LEU SEQRES 5 C 93 GLU LEU ALA GLY ASN ALA ALA ARG ASP ASN LYS LYS THR SEQRES 6 C 93 ARG ILE VAL PRO ARG HIS ILE GLN LEU ALA VAL ARG ASN SEQRES 7 C 93 ASP GLU GLU LEU SER LYS LEU LEU GLY ASP VAL THR ILE SEQRES 8 C 93 ALA ASN SEQRES 1 D 98 LYS LYS ARG SER LYS LYS ASN VAL GLU THR TYR LYS ILE SEQRES 2 D 98 TYR ILE PHE LYS VAL LEU LYS GLN VAL HIS PRO ASP ILE SEQRES 3 D 98 GLY ILE SER SER LYS ALA MET GLY ILE MET ASN SER PHE SEQRES 4 D 98 ILE ASN ASP ILE PHE GLU LYS LEU ALA GLN GLU SER SER SEQRES 5 D 98 LYS LEU ALA ARG TYR ASN LYS LYS PRO THR ILE THR SER SEQRES 6 D 98 ARG GLU ILE GLN THR ALA VAL ARG LEU VAL LEU PRO GLY SEQRES 7 D 98 GLU LEU ALA LYS HIS ALA VAL SER GLU GLY THR LYS ALA SEQRES 8 D 98 VAL THR LYS PHE THR SER SER HET SO4 A 201 5 HET SO4 A 202 5 HET GOL A 203 6 HET SO4 B 201 5 HET SO4 B 202 5 HET SO4 B 203 5 HET GOL B 204 6 HET SO4 C 201 5 HET SO4 C 202 5 HET SO4 D 201 5 HET SO4 D 202 5 HET SO4 D 203 5 HET GOL D 204 6 HET GOL D 205 6 HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 SO4 10(O4 S 2-) FORMUL 7 GOL 4(C3 H8 O3) FORMUL 19 HOH *392(H2 O) HELIX 1 AA1 SER A 16 GLY A 22 1 7 HELIX 2 AA2 PRO A 26 GLY A 37 1 12 HELIX 3 AA3 ALA A 45 ASN A 73 1 29 HELIX 4 AA4 VAL A 79 ASN A 89 1 11 HELIX 5 AA5 ASP A 90 GLY A 98 1 9 HELIX 6 AA6 TYR B 37 HIS B 49 1 13 HELIX 7 AA7 SER B 55 ASN B 84 1 30 HELIX 8 AA8 THR B 90 LEU B 102 1 13 HELIX 9 AA9 PRO B 103 SER B 123 1 21 HELIX 10 AB1 SER C 16 ALA C 21 1 6 HELIX 11 AB2 PRO C 26 GLY C 37 1 12 HELIX 12 AB3 ALA C 45 ASN C 73 1 29 HELIX 13 AB4 VAL C 79 ASN C 89 1 11 HELIX 14 AB5 ASP C 90 GLY C 98 1 9 HELIX 15 AB6 TYR D 37 HIS D 49 1 13 HELIX 16 AB7 SER D 55 ASN D 84 1 30 HELIX 17 AB8 THR D 90 LEU D 102 1 13 HELIX 18 AB9 PRO D 103 SER D 123 1 21 SHEET 1 AA1 2 ARG A 42 VAL A 43 0 SHEET 2 AA1 2 THR B 88 ILE B 89 1 O ILE B 89 N ARG A 42 SHEET 1 AA2 2 ARG A 77 ILE A 78 0 SHEET 2 AA2 2 GLY B 53 ILE B 54 1 O GLY B 53 N ILE A 78 SHEET 1 AA3 2 ARG C 42 VAL C 43 0 SHEET 2 AA3 2 THR D 88 ILE D 89 1 O ILE D 89 N ARG C 42 SHEET 1 AA4 2 ARG C 77 ILE C 78 0 SHEET 2 AA4 2 GLY D 53 ILE D 54 1 O GLY D 53 N ILE C 78 SITE 1 AC1 4 SER A 16 ARG A 17 HOH A 301 HOH A 340 SITE 1 AC2 4 ARG A 77 HOH A 311 HOH A 317 HOH A 339 SITE 1 AC3 7 GLU A 56 ALA A 60 HOH A 302 HOH A 338 SITE 2 AC3 7 GLN B 47 GLU B 113 LYS D 85 SITE 1 AC4 7 GLY A 44 GLY A 46 ALA A 47 THR B 90 SITE 2 AC4 7 SER B 91 HOH B 353 HOH B 356 SITE 1 AC5 4 THR B 36 HOH B 302 HOH B 328 HOH B 351 SITE 1 AC6 5 ARG A 77 SER B 55 SER B 56 HOH B 311 SITE 2 AC6 5 HOH B 312 SITE 1 AC7 6 ILE B 54 HOH B 304 HOH B 307 HOH B 338 SITE 2 AC7 6 HOH B 340 HOH B 349 SITE 1 AC8 4 SER C 16 ARG C 17 HOH C 317 HOH C 336 SITE 1 AC9 8 GLY C 44 ALA C 45 GLY C 46 ALA C 47 SITE 2 AC9 8 HOH C 329 HOH C 346 THR D 90 SER D 91 SITE 1 AD1 6 LYS C 95 THR D 36 GLY D 104 SO4 D 202 SITE 2 AD1 6 HOH D 304 HOH D 319 SITE 1 AD2 4 LYS D 38 SO4 D 201 HOH D 304 HOH D 323 SITE 1 AD3 7 ARG A 71 ARG D 92 GLN D 95 ARG D 99 SITE 2 AD3 7 HOH D 305 HOH D 348 HOH D 355 SITE 1 AD4 9 PHE D 42 ILE D 54 ARG D 99 GOL D 205 SITE 2 AD4 9 HOH D 301 HOH D 308 HOH D 312 HOH D 334 SITE 3 AD4 9 HOH D 347 SITE 1 AD5 8 SER D 56 GLY D 104 LYS D 108 GOL D 204 SITE 2 AD5 8 HOH D 301 HOH D 302 HOH D 334 HOH D 346 CRYST1 65.712 65.712 96.687 90.00 90.00 120.00 P 31 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015218 0.008786 0.000000 0.00000 SCALE2 0.000000 0.017572 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010343 0.00000