HEADER MEMBRANE PROTEIN 29-MAR-20 7BRI TITLE ATRIAL NATRIURETIC PEPTIDE RECEPTOR COMPLEXED WITH DENDROASPIS TITLE 2 NATRIURETIC PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATRIAL NATRIURETIC PEPTIDE RECEPTOR 1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ATRIAL NATRIURETIC PEPTIDE RECEPTOR TYPE A,NPR-A,GUANYLATE COMPND 5 CYCLASE A,GC-A; COMPND 6 EC: 4.6.1.2; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: NATRIURETIC PEPTIDE DNP; COMPND 10 CHAIN: L; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: NPR1; SOURCE 6 EXPRESSION_SYSTEM: RATTUS NORVEGICUS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10116; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: DENDROASPIS ANGUSTICEPS; SOURCE 11 ORGANISM_COMMON: EASTERN GREEN MAMBA; SOURCE 12 ORGANISM_TAXID: 8618 KEYWDS RECEPTOR-HORMONE COMPLEX, NATRIURETIC PEPTIDE, NATRIURETIC PEPTIDE KEYWDS 2 RECEPTOR, GUANYLYL-CYCLASE-COUPLED RECEPTOR, SIGNAL TRANSMISSION, KEYWDS 3 ROTATION MECHANISM, SIGNALING PROTEIN, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.OGAWA REVDAT 2 29-NOV-23 7BRI 1 REMARK REVDAT 1 31-MAR-21 7BRI 0 JRNL AUTH H.OGAWA JRNL TITL STRUCTURAL INSIGHT INTO HORMONE-RECOGNITION AND JRNL TITL 2 TRANSMEMBRANE SIGNALING BY THE ATRIAL NATRIURETIC PEPTIDE JRNL TITL 3 RECEPTOR JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2_3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.71 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.100 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 3 NUMBER OF REFLECTIONS : 51983 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.880 REMARK 3 FREE R VALUE TEST SET COUNT : 1496 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.7110 - 5.4396 0.90 4342 113 0.1731 0.1852 REMARK 3 2 5.4396 - 4.3214 0.90 4299 112 0.1512 0.1746 REMARK 3 3 4.3214 - 3.7763 0.92 4380 134 0.1666 0.2231 REMARK 3 4 3.7763 - 3.4315 0.94 4420 153 0.1896 0.2511 REMARK 3 5 3.4315 - 3.1858 0.98 4653 138 0.2083 0.2449 REMARK 3 6 3.1858 - 2.9981 0.99 4728 117 0.2256 0.2733 REMARK 3 7 2.9981 - 2.8481 1.00 4758 118 0.2424 0.2869 REMARK 3 8 2.8481 - 2.7242 1.00 4747 149 0.2561 0.3312 REMARK 3 9 2.7242 - 2.6194 1.00 4705 142 0.2752 0.3267 REMARK 3 10 2.6194 - 2.5290 1.00 4737 158 0.2801 0.2948 REMARK 3 11 2.5290 - 2.4500 1.00 4718 162 0.2903 0.3122 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.390 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 7690 REMARK 3 ANGLE : 0.829 10486 REMARK 3 CHIRALITY : 0.047 1168 REMARK 3 PLANARITY : 0.006 1356 REMARK 3 DIHEDRAL : 13.188 4562 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.2629 11.4854 -9.1798 REMARK 3 T TENSOR REMARK 3 T11: 0.5466 T22: 0.3409 REMARK 3 T33: 0.6572 T12: -0.0993 REMARK 3 T13: 0.0459 T23: 0.2940 REMARK 3 L TENSOR REMARK 3 L11: 0.9931 L22: 2.7826 REMARK 3 L33: 1.4339 L12: 1.1135 REMARK 3 L13: -0.7510 L23: -0.4878 REMARK 3 S TENSOR REMARK 3 S11: 0.0290 S12: -0.0268 S13: -0.1269 REMARK 3 S21: 0.0019 S22: -0.2327 S23: -0.7627 REMARK 3 S31: -0.2130 S32: 0.5230 S33: 0.1928 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 116 THROUGH 287 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.4353 11.1759 -14.5759 REMARK 3 T TENSOR REMARK 3 T11: 0.5197 T22: 0.2830 REMARK 3 T33: 0.6060 T12: 0.0550 REMARK 3 T13: -0.0020 T23: 0.1560 REMARK 3 L TENSOR REMARK 3 L11: 2.2648 L22: 3.3743 REMARK 3 L33: 1.8020 L12: 1.3666 REMARK 3 L13: 0.6523 L23: 0.3231 REMARK 3 S TENSOR REMARK 3 S11: -0.1256 S12: 0.3567 S13: 0.7587 REMARK 3 S21: -0.2213 S22: -0.0355 S23: 0.7747 REMARK 3 S31: -0.3132 S32: -0.2168 S33: 0.0230 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 288 THROUGH 426 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.0777 23.5280 -14.7706 REMARK 3 T TENSOR REMARK 3 T11: 0.8023 T22: 0.2965 REMARK 3 T33: 0.7193 T12: -0.0706 REMARK 3 T13: 0.0078 T23: 0.2744 REMARK 3 L TENSOR REMARK 3 L11: 1.0464 L22: 2.6616 REMARK 3 L33: 1.0776 L12: 0.4973 REMARK 3 L13: -0.3366 L23: 0.2202 REMARK 3 S TENSOR REMARK 3 S11: 0.0459 S12: 0.1833 S13: 0.3805 REMARK 3 S21: -0.1413 S22: -0.0389 S23: 0.4769 REMARK 3 S31: -0.5674 S32: -0.0894 S33: -0.1631 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.2630 -11.4376 9.8968 REMARK 3 T TENSOR REMARK 3 T11: 0.5757 T22: 0.3441 REMARK 3 T33: 0.6540 T12: 0.1041 REMARK 3 T13: -0.0508 T23: 0.2967 REMARK 3 L TENSOR REMARK 3 L11: 0.9938 L22: 2.6061 REMARK 3 L33: 1.3685 L12: -0.9531 REMARK 3 L13: 0.7493 L23: -0.4692 REMARK 3 S TENSOR REMARK 3 S11: 0.0144 S12: 0.0031 S13: 0.0680 REMARK 3 S21: 0.0115 S22: -0.2330 S23: -0.7209 REMARK 3 S31: 0.2400 S32: 0.5330 S33: 0.1851 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 116 THROUGH 287 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.4181 -11.1127 15.2530 REMARK 3 T TENSOR REMARK 3 T11: 0.5154 T22: 0.2871 REMARK 3 T33: 0.6068 T12: -0.0458 REMARK 3 T13: -0.0089 T23: 0.1633 REMARK 3 L TENSOR REMARK 3 L11: 2.1676 L22: 3.4224 REMARK 3 L33: 1.7703 L12: -1.3922 REMARK 3 L13: -0.5868 L23: 0.4153 REMARK 3 S TENSOR REMARK 3 S11: -0.1443 S12: -0.3600 S13: -0.7932 REMARK 3 S21: 0.1779 S22: -0.0280 S23: 0.8102 REMARK 3 S31: 0.3411 S32: -0.2494 S33: 0.0410 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 288 THROUGH 426 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.0601 -23.4764 15.4536 REMARK 3 T TENSOR REMARK 3 T11: 0.8075 T22: 0.3024 REMARK 3 T33: 0.7162 T12: 0.0856 REMARK 3 T13: -0.0129 T23: 0.2767 REMARK 3 L TENSOR REMARK 3 L11: 0.9620 L22: 2.6243 REMARK 3 L33: 1.1051 L12: -0.3045 REMARK 3 L13: 0.2860 L23: 0.1340 REMARK 3 S TENSOR REMARK 3 S11: 0.0317 S12: -0.1524 S13: -0.3126 REMARK 3 S21: 0.1236 S22: -0.0159 S23: 0.5160 REMARK 3 S31: 0.6061 S32: -0.0784 S33: -0.2000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 1 THROUGH 5 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.3981 0.0288 0.3464 REMARK 3 T TENSOR REMARK 3 T11: 0.5111 T22: 0.3885 REMARK 3 T33: 0.2567 T12: 0.0062 REMARK 3 T13: -0.0156 T23: 0.0726 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.0018 REMARK 3 L33: 0.0028 L12: -0.0005 REMARK 3 L13: 0.0007 L23: -0.0019 REMARK 3 S TENSOR REMARK 3 S11: 0.0369 S12: 0.0003 S13: -0.0016 REMARK 3 S21: 0.0013 S22: 0.0175 S23: 0.0055 REMARK 3 S31: 0.0001 S32: -0.0050 S33: 0.0000 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 6 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.8999 0.0217 0.3658 REMARK 3 T TENSOR REMARK 3 T11: 0.3616 T22: 0.1279 REMARK 3 T33: 0.2639 T12: -0.0105 REMARK 3 T13: 0.0059 T23: 0.0884 REMARK 3 L TENSOR REMARK 3 L11: 0.0001 L22: 0.0167 REMARK 3 L33: 0.0025 L12: 0.0007 REMARK 3 L13: 0.0002 L23: 0.0065 REMARK 3 S TENSOR REMARK 3 S11: 0.0040 S12: 0.0003 S13: -0.0022 REMARK 3 S21: -0.0019 S22: -0.0131 S23: -0.0091 REMARK 3 S31: 0.0017 S32: 0.0033 S33: -0.0306 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 26 THROUGH 29 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.9079 0.0134 0.4073 REMARK 3 T TENSOR REMARK 3 T11: 0.3557 T22: 0.3205 REMARK 3 T33: 0.1850 T12: -0.0019 REMARK 3 T13: -0.0014 T23: 0.0831 REMARK 3 L TENSOR REMARK 3 L11: -0.0001 L22: 0.0008 REMARK 3 L33: 0.0011 L12: 0.0001 REMARK 3 L13: -0.0001 L23: -0.0010 REMARK 3 S TENSOR REMARK 3 S11: 0.0129 S12: 0.0028 S13: 0.0031 REMARK 3 S21: 0.0029 S22: 0.0130 S23: -0.0117 REMARK 3 S31: -0.0019 S32: 0.0072 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7BRI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 31-MAR-20. REMARK 100 THE DEPOSITION ID IS D_1300016349. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-DEC-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.3 - 6.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 716.1 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 716.1 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51990 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 200 DATA REDUNDANCY : 22.10 REMARK 200 R MERGE (I) : 0.05300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 30.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.52 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.25500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP 11.2.08 REMARK 200 STARTING MODEL: 1DP4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM MALONATE, MES, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 300K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 87.48900 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 174.97800 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 131.23350 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 218.72250 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 43.74450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, L, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 427 REMARK 465 GLU A 428 REMARK 465 ASP A 429 REMARK 465 PRO A 430 REMARK 465 ALA A 431 REMARK 465 CYS A 432 REMARK 465 ASN A 433 REMARK 465 GLN A 434 REMARK 465 ASP A 435 REMARK 465 ASN B 427 REMARK 465 GLU B 428 REMARK 465 ASP B 429 REMARK 465 PRO B 430 REMARK 465 ALA B 431 REMARK 465 CYS B 432 REMARK 465 ASN B 433 REMARK 465 GLN B 434 REMARK 465 ASP B 435 REMARK 465 ARG L 30 REMARK 465 PRO L 31 REMARK 465 ASN L 32 REMARK 465 ALA L 33 REMARK 465 PRO L 34 REMARK 465 SER L 35 REMARK 465 THR L 36 REMARK 465 SER L 37 REMARK 465 ALA L 38 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 157 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 157 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O4 NAG D 2 O5 MAN D 3 2.10 REMARK 500 OD1 ASP B 156 O HOH B 601 2.13 REMARK 500 O3 MAN D 3 C2 MAN D 4 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 41 68.07 37.36 REMARK 500 SER A 77 65.69 38.25 REMARK 500 LEU A 122 17.95 59.03 REMARK 500 ARG A 143 32.25 -89.58 REMARK 500 LEU A 144 -10.27 -161.60 REMARK 500 HIS A 148 -77.93 -123.76 REMARK 500 ARG A 157 -150.95 -161.14 REMARK 500 ASP A 160 -157.24 -100.16 REMARK 500 ASP A 160 -158.25 -90.53 REMARK 500 ASP A 235 -14.44 -142.55 REMARK 500 LYS A 249 -148.24 -83.12 REMARK 500 PRO A 256 -149.90 -100.67 REMARK 500 ARG A 262 -9.96 -147.77 REMARK 500 GLU A 406 16.77 58.91 REMARK 500 CYS A 423 -155.55 -87.83 REMARK 500 THR B 12 -37.46 -130.94 REMARK 500 LEU B 41 68.46 39.50 REMARK 500 ARG B 143 31.26 -85.46 REMARK 500 LEU B 144 -10.57 -161.98 REMARK 500 HIS B 148 -75.21 -121.23 REMARK 500 ASP B 160 -159.63 -97.82 REMARK 500 ASP B 235 -15.07 -146.78 REMARK 500 LYS B 249 -151.41 -89.45 REMARK 500 PRO B 256 -150.58 -100.56 REMARK 500 LYS L 11 170.26 55.08 REMARK 500 LYS L 11 170.89 56.36 REMARK 500 ASN L 20 46.80 38.87 REMARK 500 ASN L 20 45.80 38.88 REMARK 500 LEU L 21 -73.47 -45.44 REMARK 500 LEU L 21 -72.32 -44.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1DP4 RELATED DB: PDB REMARK 900 RELATED ID: 1T34 RELATED DB: PDB DBREF 7BRI A 1 435 UNP P18910 ANPRA_RAT 29 463 DBREF 7BRI B 1 435 UNP P18910 ANPRA_RAT 29 463 DBREF 7BRI L 1 38 UNP P28374 VNP_DENAN 1 38 SEQRES 1 A 435 SER ASP LEU THR VAL ALA VAL VAL LEU PRO LEU THR ASN SEQRES 2 A 435 THR SER TYR PRO TRP SER TRP ALA ARG VAL GLY PRO ALA SEQRES 3 A 435 VAL GLU LEU ALA LEU ALA ARG VAL LYS ALA ARG PRO ASP SEQRES 4 A 435 LEU LEU PRO GLY TRP THR VAL ARG MET VAL LEU GLY SER SEQRES 5 A 435 SER GLU ASN ALA ALA GLY VAL CYS SER ASP THR ALA ALA SEQRES 6 A 435 PRO LEU ALA ALA VAL ASP LEU LYS TRP GLU HIS SER PRO SEQRES 7 A 435 ALA VAL PHE LEU GLY PRO GLY CYS VAL TYR SER ALA ALA SEQRES 8 A 435 PRO VAL GLY ARG PHE THR ALA HIS TRP ARG VAL PRO LEU SEQRES 9 A 435 LEU THR ALA GLY ALA PRO ALA LEU GLY ILE GLY VAL LYS SEQRES 10 A 435 ASP GLU TYR ALA LEU THR THR ARG THR GLY PRO SER HIS SEQRES 11 A 435 VAL LYS LEU GLY ASP PHE VAL THR ALA LEU HIS ARG ARG SEQRES 12 A 435 LEU GLY TRP GLU HIS GLN ALA LEU VAL LEU TYR ALA ASP SEQRES 13 A 435 ARG LEU GLY ASP ASP ARG PRO CYS PHE PHE ILE VAL GLU SEQRES 14 A 435 GLY LEU TYR MET ARG VAL ARG GLU ARG LEU ASN ILE THR SEQRES 15 A 435 VAL ASN HIS GLN GLU PHE VAL GLU GLY ASP PRO ASP HIS SEQRES 16 A 435 TYR PRO LYS LEU LEU ARG ALA VAL ARG ARG LYS GLY ARG SEQRES 17 A 435 VAL ILE TYR ILE CYS SER SER PRO ASP ALA PHE ARG ASN SEQRES 18 A 435 LEU MET LEU LEU ALA LEU ASN ALA GLY LEU THR GLY GLU SEQRES 19 A 435 ASP TYR VAL PHE PHE HIS LEU ASP VAL PHE GLY GLN SER SEQRES 20 A 435 LEU LYS SER ALA GLN GLY LEU VAL PRO GLN LYS PRO TRP SEQRES 21 A 435 GLU ARG GLY ASP GLY GLN ASP ARG SER ALA ARG GLN ALA SEQRES 22 A 435 PHE GLN ALA ALA LYS ILE ILE THR TYR LYS GLU PRO ASP SEQRES 23 A 435 ASN PRO GLU TYR LEU GLU PHE LEU LYS GLN LEU LYS LEU SEQRES 24 A 435 LEU ALA ASP LYS LYS PHE ASN PHE THR VAL GLU ASP GLY SEQRES 25 A 435 LEU LYS ASN ILE ILE PRO ALA SER PHE HIS ASP GLY LEU SEQRES 26 A 435 LEU LEU TYR VAL GLN ALA VAL THR GLU THR LEU ALA GLN SEQRES 27 A 435 GLY GLY THR VAL THR ASP GLY GLU ASN ILE THR GLN ARG SEQRES 28 A 435 MET TRP ASN ARG SER PHE GLN GLY VAL THR GLY TYR LEU SEQRES 29 A 435 LYS ILE ASP ARG ASN GLY ASP ARG ASP THR ASP PHE SER SEQRES 30 A 435 LEU TRP ASP MET ASP PRO GLU THR GLY ALA PHE ARG VAL SEQRES 31 A 435 VAL LEU ASN TYR ASN GLY THR SER GLN GLU LEU MET ALA SEQRES 32 A 435 VAL SER GLU HIS LYS LEU TYR TRP PRO LEU GLY TYR PRO SEQRES 33 A 435 PRO PRO ASP VAL PRO LYS CYS GLY PHE ASP ASN GLU ASP SEQRES 34 A 435 PRO ALA CYS ASN GLN ASP SEQRES 1 B 435 SER ASP LEU THR VAL ALA VAL VAL LEU PRO LEU THR ASN SEQRES 2 B 435 THR SER TYR PRO TRP SER TRP ALA ARG VAL GLY PRO ALA SEQRES 3 B 435 VAL GLU LEU ALA LEU ALA ARG VAL LYS ALA ARG PRO ASP SEQRES 4 B 435 LEU LEU PRO GLY TRP THR VAL ARG MET VAL LEU GLY SER SEQRES 5 B 435 SER GLU ASN ALA ALA GLY VAL CYS SER ASP THR ALA ALA SEQRES 6 B 435 PRO LEU ALA ALA VAL ASP LEU LYS TRP GLU HIS SER PRO SEQRES 7 B 435 ALA VAL PHE LEU GLY PRO GLY CYS VAL TYR SER ALA ALA SEQRES 8 B 435 PRO VAL GLY ARG PHE THR ALA HIS TRP ARG VAL PRO LEU SEQRES 9 B 435 LEU THR ALA GLY ALA PRO ALA LEU GLY ILE GLY VAL LYS SEQRES 10 B 435 ASP GLU TYR ALA LEU THR THR ARG THR GLY PRO SER HIS SEQRES 11 B 435 VAL LYS LEU GLY ASP PHE VAL THR ALA LEU HIS ARG ARG SEQRES 12 B 435 LEU GLY TRP GLU HIS GLN ALA LEU VAL LEU TYR ALA ASP SEQRES 13 B 435 ARG LEU GLY ASP ASP ARG PRO CYS PHE PHE ILE VAL GLU SEQRES 14 B 435 GLY LEU TYR MET ARG VAL ARG GLU ARG LEU ASN ILE THR SEQRES 15 B 435 VAL ASN HIS GLN GLU PHE VAL GLU GLY ASP PRO ASP HIS SEQRES 16 B 435 TYR PRO LYS LEU LEU ARG ALA VAL ARG ARG LYS GLY ARG SEQRES 17 B 435 VAL ILE TYR ILE CYS SER SER PRO ASP ALA PHE ARG ASN SEQRES 18 B 435 LEU MET LEU LEU ALA LEU ASN ALA GLY LEU THR GLY GLU SEQRES 19 B 435 ASP TYR VAL PHE PHE HIS LEU ASP VAL PHE GLY GLN SER SEQRES 20 B 435 LEU LYS SER ALA GLN GLY LEU VAL PRO GLN LYS PRO TRP SEQRES 21 B 435 GLU ARG GLY ASP GLY GLN ASP ARG SER ALA ARG GLN ALA SEQRES 22 B 435 PHE GLN ALA ALA LYS ILE ILE THR TYR LYS GLU PRO ASP SEQRES 23 B 435 ASN PRO GLU TYR LEU GLU PHE LEU LYS GLN LEU LYS LEU SEQRES 24 B 435 LEU ALA ASP LYS LYS PHE ASN PHE THR VAL GLU ASP GLY SEQRES 25 B 435 LEU LYS ASN ILE ILE PRO ALA SER PHE HIS ASP GLY LEU SEQRES 26 B 435 LEU LEU TYR VAL GLN ALA VAL THR GLU THR LEU ALA GLN SEQRES 27 B 435 GLY GLY THR VAL THR ASP GLY GLU ASN ILE THR GLN ARG SEQRES 28 B 435 MET TRP ASN ARG SER PHE GLN GLY VAL THR GLY TYR LEU SEQRES 29 B 435 LYS ILE ASP ARG ASN GLY ASP ARG ASP THR ASP PHE SER SEQRES 30 B 435 LEU TRP ASP MET ASP PRO GLU THR GLY ALA PHE ARG VAL SEQRES 31 B 435 VAL LEU ASN TYR ASN GLY THR SER GLN GLU LEU MET ALA SEQRES 32 B 435 VAL SER GLU HIS LYS LEU TYR TRP PRO LEU GLY TYR PRO SEQRES 33 B 435 PRO PRO ASP VAL PRO LYS CYS GLY PHE ASP ASN GLU ASP SEQRES 34 B 435 PRO ALA CYS ASN GLN ASP SEQRES 1 L 38 GLU VAL LYS TYR ASP PRO CYS PHE GLY HIS LYS ILE ASP SEQRES 2 L 38 ARG ILE ASN HIS VAL SER ASN LEU GLY CYS PRO SER LEU SEQRES 3 L 38 ARG ASP PRO ARG PRO ASN ALA PRO SER THR SER ALA HET NAG C 1 14 HET NAG C 2 14 HET MAN C 3 11 HET NAG D 1 14 HET NAG D 2 14 HET MAN D 3 11 HET MAN D 4 11 HET NAG E 1 14 HET NAG E 2 14 HET MAN E 3 11 HET NAG F 1 14 HET NAG F 2 14 HET MAN F 3 11 HET MAN F 4 11 HET CL A 508 1 HET CL B 508 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM CL CHLORIDE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 4 NAG 8(C8 H15 N O6) FORMUL 4 MAN 6(C6 H12 O6) FORMUL 8 CL 2(CL 1-) FORMUL 10 HOH *140(H2 O) HELIX 1 AA1 SER A 19 ARG A 37 1 19 HELIX 2 AA2 THR A 63 SER A 77 1 15 HELIX 3 AA3 CYS A 86 ARG A 101 1 16 HELIX 4 AA4 ALA A 111 VAL A 116 5 6 HELIX 5 AA5 SER A 129 ARG A 143 1 15 HELIX 6 AA6 ARG A 162 LEU A 179 1 18 HELIX 7 AA7 ASP A 194 GLY A 207 1 14 HELIX 8 AA8 SER A 215 ALA A 229 1 15 HELIX 9 AA9 GLN A 266 GLN A 275 1 10 HELIX 10 AB1 ASN A 287 PHE A 305 1 19 HELIX 11 AB2 GLY A 312 LYS A 314 5 3 HELIX 12 AB3 ASN A 315 GLN A 338 1 24 HELIX 13 AB4 ASP A 344 TRP A 353 1 10 HELIX 14 AB5 SER B 19 ARG B 37 1 19 HELIX 15 AB6 THR B 63 SER B 77 1 15 HELIX 16 AB7 CYS B 86 ARG B 101 1 16 HELIX 17 AB8 LEU B 112 VAL B 116 5 5 HELIX 18 AB9 SER B 129 ARG B 143 1 15 HELIX 19 AC1 ARG B 162 LEU B 179 1 18 HELIX 20 AC2 ASP B 194 GLY B 207 1 14 HELIX 21 AC3 SER B 215 ALA B 229 1 15 HELIX 22 AC4 GLN B 266 PHE B 274 1 9 HELIX 23 AC5 ASN B 287 PHE B 305 1 19 HELIX 24 AC6 GLY B 312 LYS B 314 5 3 HELIX 25 AC7 ASN B 315 GLN B 338 1 24 HELIX 26 AC8 ASP B 344 TRP B 353 1 10 HELIX 27 AC9 ASP L 13 VAL L 18 5 6 SHEET 1 AA1 5 THR A 45 SER A 52 0 SHEET 2 AA1 5 ASP A 2 LEU A 9 1 N VAL A 5 O ARG A 47 SHEET 3 AA1 5 VAL A 80 LEU A 82 1 O VAL A 80 N ALA A 6 SHEET 4 AA1 5 LEU A 104 THR A 106 1 O LEU A 105 N PHE A 81 SHEET 5 AA1 5 THR A 123 ARG A 125 1 O THR A 124 N LEU A 104 SHEET 1 AA2 8 THR A 182 PHE A 188 0 SHEET 2 AA2 8 GLN A 149 ALA A 155 1 N ALA A 150 O ASN A 184 SHEET 3 AA2 8 VAL A 209 CYS A 213 1 O TYR A 211 N LEU A 151 SHEET 4 AA2 8 VAL A 237 LEU A 241 1 O PHE A 239 N ILE A 210 SHEET 5 AA2 8 ALA A 277 TYR A 282 1 O LYS A 278 N PHE A 238 SHEET 6 AA2 8 PHE A 376 MET A 381 -1 O TRP A 379 N ILE A 279 SHEET 7 AA2 8 PHE A 388 ASN A 395 -1 O TYR A 394 N PHE A 376 SHEET 8 AA2 8 GLU A 400 ALA A 403 -1 O GLU A 400 N ASN A 395 SHEET 1 AA3 2 ARG A 355 GLY A 359 0 SHEET 2 AA3 2 GLY A 362 ILE A 366 -1 O GLY A 362 N GLY A 359 SHEET 1 AA4 5 THR B 45 SER B 52 0 SHEET 2 AA4 5 ASP B 2 LEU B 9 1 N VAL B 5 O ARG B 47 SHEET 3 AA4 5 VAL B 80 LEU B 82 1 O LEU B 82 N ALA B 6 SHEET 4 AA4 5 LEU B 104 THR B 106 1 O LEU B 105 N PHE B 81 SHEET 5 AA4 5 THR B 123 ARG B 125 1 O THR B 124 N LEU B 104 SHEET 1 AA5 8 THR B 182 PHE B 188 0 SHEET 2 AA5 8 GLN B 149 ALA B 155 1 N ALA B 150 O ASN B 184 SHEET 3 AA5 8 VAL B 209 CYS B 213 1 O TYR B 211 N LEU B 151 SHEET 4 AA5 8 VAL B 237 LEU B 241 1 O PHE B 239 N ILE B 212 SHEET 5 AA5 8 ALA B 277 TYR B 282 1 O LYS B 278 N PHE B 238 SHEET 6 AA5 8 PHE B 376 MET B 381 -1 O TRP B 379 N ILE B 279 SHEET 7 AA5 8 PHE B 388 ASN B 395 -1 O TYR B 394 N PHE B 376 SHEET 8 AA5 8 GLU B 400 ALA B 403 -1 O GLU B 400 N ASN B 395 SHEET 1 AA6 2 ARG B 355 GLY B 359 0 SHEET 2 AA6 2 GLY B 362 ILE B 366 -1 O GLY B 362 N GLY B 359 SSBOND 1 CYS A 60 CYS A 86 1555 1555 2.04 SSBOND 2 CYS A 164 CYS A 213 1555 1555 2.06 SSBOND 3 CYS B 60 CYS B 86 1555 1555 2.04 SSBOND 4 CYS B 164 CYS B 213 1555 1555 2.05 SSBOND 5 CYS L 7 CYS L 23 1555 1555 2.03 LINK ND2 ASN A 13 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN A 395 C1 NAG D 1 1555 1555 1.43 LINK ND2 ASN B 13 C1 NAG E 1 1555 1555 1.44 LINK ND2 ASN B 395 C1 NAG F 1 1555 1555 1.43 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.38 LINK O4 NAG C 2 C1 MAN C 3 1555 1555 1.38 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.38 LINK O4 NAG D 2 C1 MAN D 3 1555 1555 1.38 LINK O3 MAN D 3 C1 MAN D 4 1555 1555 1.37 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.38 LINK O4 NAG E 2 C1 MAN E 3 1555 1555 1.38 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.38 LINK O4 NAG F 2 C1 MAN F 3 1555 1555 1.38 LINK O3 MAN F 3 C1 MAN F 4 1555 1555 1.37 CISPEP 1 GLY A 83 PRO A 84 0 0.49 CISPEP 2 VAL A 255 PRO A 256 0 1.35 CISPEP 3 GLY B 83 PRO B 84 0 2.21 CISPEP 4 VAL B 255 PRO B 256 0 2.14 CRYST1 99.597 99.597 262.467 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010040 0.005797 0.000000 0.00000 SCALE2 0.000000 0.011594 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003810 0.00000