HEADER MEMBRANE PROTEIN 29-MAR-20 7BRJ TITLE ATRIAL NATRIURETIC PEPTIDE RECEPTOR COMPLEXED WITH DELETION MUTANT OF TITLE 2 HUMAN ATRIAL NATRIURETIC PEPTIDE[7-28] COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATRIAL NATRIURETIC PEPTIDE RECEPTOR 1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ATRIAL NATRIURETIC PEPTIDE RECEPTOR TYPE A,NPR-A,GUANYLATE COMPND 5 CYCLASE A,GC-A; COMPND 6 EC: 4.6.1.2; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: URODILATIN; COMPND 10 CHAIN: L; COMPND 11 SYNONYM: URO,CDD 95-126,CDD-ANP (95-126),PRO ATRIAL NATRIURETIC COMPND 12 PEPTIDE 95-126,PROANP 95-126; COMPND 13 ENGINEERED: YES; COMPND 14 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: NPR1; SOURCE 6 EXPRESSION_SYSTEM: RATTUS NORVEGICUS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10116; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS RECEPTOR-HORMONE COMPLEX, NATRIURETIC PEPTIDE, NATRIURETIC PEPTIDE KEYWDS 2 RECEPTOR, GUANYLYL-CYCLASE-COUPLED RECEPTOR, SIGNAL TRANSMISSION, KEYWDS 3 ROTATION MECHANISM, SIGNALING PROTEIN, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.OGAWA REVDAT 3 13-NOV-24 7BRJ 1 REMARK REVDAT 2 29-NOV-23 7BRJ 1 REMARK REVDAT 1 31-MAR-21 7BRJ 0 JRNL AUTH H.OGAWA JRNL TITL STRUCTURAL INSIGHT INTO HORMONE-RECOGNITION AND JRNL TITL 2 TRANSMEMBRANE SIGNALING BY THE ATRIAL NATRIURETIC PEPTIDE JRNL TITL 3 RECEPTOR JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2_3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.26 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.430 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 39898 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.060 REMARK 3 FREE R VALUE TEST SET COUNT : 1219 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.2580 - 5.6126 0.98 4262 151 0.1778 0.2087 REMARK 3 2 5.6126 - 4.4564 1.00 4319 153 0.1579 0.1992 REMARK 3 3 4.4564 - 3.8935 0.99 4311 134 0.1553 0.2167 REMARK 3 4 3.8935 - 3.5377 0.99 4283 115 0.1737 0.2435 REMARK 3 5 3.5377 - 3.2842 0.99 4327 113 0.2130 0.2297 REMARK 3 6 3.2842 - 3.0906 1.00 4260 152 0.2414 0.2613 REMARK 3 7 3.0906 - 2.9359 1.00 4281 132 0.2629 0.2922 REMARK 3 8 2.9359 - 2.8081 1.00 4363 127 0.2865 0.3236 REMARK 3 9 2.8081 - 2.7000 1.00 4273 142 0.3157 0.3775 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.400 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.140 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 7470 REMARK 3 ANGLE : 0.779 10170 REMARK 3 CHIRALITY : 0.046 1126 REMARK 3 PLANARITY : 0.005 1312 REMARK 3 DIHEDRAL : 13.265 4418 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.8713 12.0046 -12.5883 REMARK 3 T TENSOR REMARK 3 T11: 0.8808 T22: 0.6551 REMARK 3 T33: 0.9184 T12: -0.1897 REMARK 3 T13: 0.0935 T23: 0.2974 REMARK 3 L TENSOR REMARK 3 L11: 2.5680 L22: 3.9699 REMARK 3 L33: 2.4235 L12: -0.4934 REMARK 3 L13: -0.5103 L23: -1.8465 REMARK 3 S TENSOR REMARK 3 S11: -0.2276 S12: 0.1290 S13: -0.2318 REMARK 3 S21: -0.2815 S22: -0.2108 S23: -1.2859 REMARK 3 S31: -0.2360 S32: 0.8721 S33: 0.4247 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 77 THROUGH 178 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.8223 12.7060 -4.3203 REMARK 3 T TENSOR REMARK 3 T11: 0.8249 T22: 0.2723 REMARK 3 T33: 0.4465 T12: -0.0040 REMARK 3 T13: -0.0011 T23: 0.1198 REMARK 3 L TENSOR REMARK 3 L11: 8.0347 L22: 3.3480 REMARK 3 L33: 2.2958 L12: 1.7180 REMARK 3 L13: 0.3246 L23: -0.4678 REMARK 3 S TENSOR REMARK 3 S11: 0.0325 S12: -0.3934 S13: 0.4021 REMARK 3 S21: 0.3694 S22: -0.1662 S23: -0.0299 REMARK 3 S31: -0.5767 S32: -0.0475 S33: 0.1021 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 179 THROUGH 266 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.3803 8.2050 -19.0265 REMARK 3 T TENSOR REMARK 3 T11: 0.7452 T22: 0.5555 REMARK 3 T33: 0.6979 T12: 0.0549 REMARK 3 T13: -0.1377 T23: 0.2325 REMARK 3 L TENSOR REMARK 3 L11: 5.0901 L22: 5.4611 REMARK 3 L33: 5.5529 L12: 2.7533 REMARK 3 L13: -0.5501 L23: 0.9158 REMARK 3 S TENSOR REMARK 3 S11: -0.4887 S12: 0.8354 S13: 1.0637 REMARK 3 S21: -0.8782 S22: 0.4377 S23: 0.8863 REMARK 3 S31: -0.3225 S32: -0.7528 S33: -0.1444 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 267 THROUGH 426 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.3017 22.6458 -15.9579 REMARK 3 T TENSOR REMARK 3 T11: 1.1171 T22: 0.4761 REMARK 3 T33: 0.8118 T12: 0.0007 REMARK 3 T13: -0.0301 T23: 0.2766 REMARK 3 L TENSOR REMARK 3 L11: 3.3698 L22: 4.3604 REMARK 3 L33: 1.9804 L12: 2.4355 REMARK 3 L13: -0.7155 L23: -0.8365 REMARK 3 S TENSOR REMARK 3 S11: -0.1944 S12: 0.4377 S13: 0.7577 REMARK 3 S21: -0.3380 S22: 0.1560 S23: 0.4631 REMARK 3 S31: -0.8482 S32: -0.1500 S33: 0.0631 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.8742 -11.9996 12.9472 REMARK 3 T TENSOR REMARK 3 T11: 0.8311 T22: 0.6374 REMARK 3 T33: 0.9382 T12: 0.1782 REMARK 3 T13: -0.1000 T23: 0.3135 REMARK 3 L TENSOR REMARK 3 L11: 3.6239 L22: 5.9890 REMARK 3 L33: 2.4649 L12: -1.6870 REMARK 3 L13: 0.5325 L23: -2.0699 REMARK 3 S TENSOR REMARK 3 S11: -0.1178 S12: -0.1102 S13: 0.6056 REMARK 3 S21: 0.3161 S22: -0.3423 S23: -1.5529 REMARK 3 S31: 0.1669 S32: 0.8864 S33: 0.3780 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 77 THROUGH 178 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.8335 -12.7142 4.6700 REMARK 3 T TENSOR REMARK 3 T11: 0.8568 T22: 0.2678 REMARK 3 T33: 0.4619 T12: 0.0087 REMARK 3 T13: 0.0054 T23: 0.1444 REMARK 3 L TENSOR REMARK 3 L11: 7.3705 L22: 4.1931 REMARK 3 L33: 2.6469 L12: -1.6824 REMARK 3 L13: -0.4863 L23: -0.3967 REMARK 3 S TENSOR REMARK 3 S11: 0.0593 S12: 0.2608 S13: -0.1768 REMARK 3 S21: -0.4599 S22: -0.1537 S23: 0.0117 REMARK 3 S31: 0.5888 S32: -0.0793 S33: 0.1347 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 179 THROUGH 266 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.3861 -8.2144 19.3783 REMARK 3 T TENSOR REMARK 3 T11: 0.7624 T22: 0.5256 REMARK 3 T33: 0.6506 T12: -0.0573 REMARK 3 T13: 0.1463 T23: 0.2174 REMARK 3 L TENSOR REMARK 3 L11: 4.7766 L22: 6.0103 REMARK 3 L33: 5.5271 L12: -2.5409 REMARK 3 L13: 0.3419 L23: 0.7876 REMARK 3 S TENSOR REMARK 3 S11: -0.5395 S12: -0.8375 S13: -1.1078 REMARK 3 S21: 0.8487 S22: 0.4615 S23: 0.9665 REMARK 3 S31: 0.3512 S32: -0.7406 S33: -0.1001 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 267 THROUGH 426 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.3053 -22.6581 16.3082 REMARK 3 T TENSOR REMARK 3 T11: 1.1161 T22: 0.4480 REMARK 3 T33: 0.7774 T12: 0.0127 REMARK 3 T13: 0.0456 T23: 0.2712 REMARK 3 L TENSOR REMARK 3 L11: 3.7391 L22: 4.7339 REMARK 3 L33: 1.9003 L12: -1.8238 REMARK 3 L13: 0.7159 L23: -1.0591 REMARK 3 S TENSOR REMARK 3 S11: -0.1951 S12: -0.4264 S13: -0.6961 REMARK 3 S21: 0.3691 S22: 0.1660 S23: 0.4427 REMARK 3 S31: 0.8248 S32: -0.1568 S33: 0.0660 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 7 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.1204 -1.5686 0.1545 REMARK 3 T TENSOR REMARK 3 T11: 1.2173 T22: 0.5987 REMARK 3 T33: 0.3279 T12: 0.0081 REMARK 3 T13: -0.0480 T23: 0.1548 REMARK 3 L TENSOR REMARK 3 L11: 0.8871 L22: 8.0943 REMARK 3 L33: 3.2225 L12: -2.6562 REMARK 3 L13: -1.6935 L23: 4.7905 REMARK 3 S TENSOR REMARK 3 S11: 0.3158 S12: 0.2971 S13: 0.1165 REMARK 3 S21: -0.9702 S22: 0.2669 S23: -1.2765 REMARK 3 S31: -0.7032 S32: 0.2895 S33: 0.6742 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 17 THROUGH 28 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.6395 4.3318 4.2982 REMARK 3 T TENSOR REMARK 3 T11: 1.8317 T22: 0.8616 REMARK 3 T33: -0.3152 T12: 0.0662 REMARK 3 T13: 0.5842 T23: 0.3100 REMARK 3 L TENSOR REMARK 3 L11: 0.1131 L22: 0.6826 REMARK 3 L33: 0.3544 L12: 0.1701 REMARK 3 L13: 0.1312 L23: 0.4568 REMARK 3 S TENSOR REMARK 3 S11: 0.0588 S12: -0.5036 S13: 0.0440 REMARK 3 S21: 0.0373 S22: -0.3988 S23: 0.0058 REMARK 3 S31: 0.4447 S32: -1.1030 S33: -0.3040 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7BRJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 31-MAR-20. REMARK 100 THE DEPOSITION ID IS D_1300016350. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-AUG-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.3 - 6.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 716.1 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 716.1 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39908 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 10.90 REMARK 200 R MERGE (I) : 0.03100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.78 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.30700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP 11.2.08 REMARK 200 STARTING MODEL: 1DP4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM MALONATE, MES, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 300K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 86.79900 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 173.59800 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 130.19850 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 216.99750 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 43.39950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, L, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 427 REMARK 465 GLU A 428 REMARK 465 ASP A 429 REMARK 465 PRO A 430 REMARK 465 ALA A 431 REMARK 465 CYS A 432 REMARK 465 ASN A 433 REMARK 465 GLN A 434 REMARK 465 ASP A 435 REMARK 465 ASN B 427 REMARK 465 GLU B 428 REMARK 465 ASP B 429 REMARK 465 PRO B 430 REMARK 465 ALA B 431 REMARK 465 CYS B 432 REMARK 465 ASN B 433 REMARK 465 GLN B 434 REMARK 465 ASP B 435 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 120 58.79 -90.44 REMARK 500 TYR A 120 58.79 -92.56 REMARK 500 HIS A 148 -62.16 -129.32 REMARK 500 ARG A 205 -21.36 -146.90 REMARK 500 ASP A 235 -34.70 -133.87 REMARK 500 ASP A 242 72.85 -111.30 REMARK 500 ARG A 262 -17.57 -143.38 REMARK 500 LYS A 303 -70.64 -80.27 REMARK 500 ASN A 306 27.93 49.83 REMARK 500 GLU A 406 19.77 59.42 REMARK 500 LYS A 422 -87.08 -53.33 REMARK 500 CYS A 423 59.55 -102.59 REMARK 500 LEU B 41 66.13 39.47 REMARK 500 TYR B 120 55.96 -92.58 REMARK 500 LEU B 122 19.89 55.55 REMARK 500 HIS B 148 -62.70 -131.40 REMARK 500 ARG B 204 31.61 -89.32 REMARK 500 ARG B 205 -25.60 -147.41 REMARK 500 ASP B 242 72.62 -117.34 REMARK 500 ARG B 262 -14.94 -140.46 REMARK 500 LYS B 303 -70.08 -80.17 REMARK 500 LYS B 422 -85.74 -53.26 REMARK 500 CYS B 423 59.13 -103.62 REMARK 500 ARG L 11 -178.41 55.09 REMARK 500 ARG L 11 -178.41 55.13 REMARK 500 SER L 19 -2.67 -154.61 REMARK 500 LEU L 21 -22.36 88.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1DP4 RELATED DB: PDB REMARK 900 RELATED ID: 1T34 RELATED DB: PDB DBREF 7BRJ A 1 435 UNP P18910 ANPRA_RAT 29 463 DBREF 7BRJ B 1 435 UNP P18910 ANPRA_RAT 29 463 DBREF 7BRJ L 3 28 UNP P01160 ANF_HUMAN 124 151 SEQADV 7BRJ L UNP P01160 SER 124 DELETION SEQADV 7BRJ L UNP P01160 LEU 125 DELETION SEQADV 7BRJ L UNP P01160 ARG 126 DELETION SEQADV 7BRJ L UNP P01160 ARG 127 DELETION SEQADV 7BRJ L UNP P01160 SER 128 DELETION SEQADV 7BRJ L UNP P01160 SER 129 DELETION SEQRES 1 A 435 SER ASP LEU THR VAL ALA VAL VAL LEU PRO LEU THR ASN SEQRES 2 A 435 THR SER TYR PRO TRP SER TRP ALA ARG VAL GLY PRO ALA SEQRES 3 A 435 VAL GLU LEU ALA LEU ALA ARG VAL LYS ALA ARG PRO ASP SEQRES 4 A 435 LEU LEU PRO GLY TRP THR VAL ARG MET VAL LEU GLY SER SEQRES 5 A 435 SER GLU ASN ALA ALA GLY VAL CYS SER ASP THR ALA ALA SEQRES 6 A 435 PRO LEU ALA ALA VAL ASP LEU LYS TRP GLU HIS SER PRO SEQRES 7 A 435 ALA VAL PHE LEU GLY PRO GLY CYS VAL TYR SER ALA ALA SEQRES 8 A 435 PRO VAL GLY ARG PHE THR ALA HIS TRP ARG VAL PRO LEU SEQRES 9 A 435 LEU THR ALA GLY ALA PRO ALA LEU GLY ILE GLY VAL LYS SEQRES 10 A 435 ASP GLU TYR ALA LEU THR THR ARG THR GLY PRO SER HIS SEQRES 11 A 435 VAL LYS LEU GLY ASP PHE VAL THR ALA LEU HIS ARG ARG SEQRES 12 A 435 LEU GLY TRP GLU HIS GLN ALA LEU VAL LEU TYR ALA ASP SEQRES 13 A 435 ARG LEU GLY ASP ASP ARG PRO CYS PHE PHE ILE VAL GLU SEQRES 14 A 435 GLY LEU TYR MET ARG VAL ARG GLU ARG LEU ASN ILE THR SEQRES 15 A 435 VAL ASN HIS GLN GLU PHE VAL GLU GLY ASP PRO ASP HIS SEQRES 16 A 435 TYR PRO LYS LEU LEU ARG ALA VAL ARG ARG LYS GLY ARG SEQRES 17 A 435 VAL ILE TYR ILE CYS SER SER PRO ASP ALA PHE ARG ASN SEQRES 18 A 435 LEU MET LEU LEU ALA LEU ASN ALA GLY LEU THR GLY GLU SEQRES 19 A 435 ASP TYR VAL PHE PHE HIS LEU ASP VAL PHE GLY GLN SER SEQRES 20 A 435 LEU LYS SER ALA GLN GLY LEU VAL PRO GLN LYS PRO TRP SEQRES 21 A 435 GLU ARG GLY ASP GLY GLN ASP ARG SER ALA ARG GLN ALA SEQRES 22 A 435 PHE GLN ALA ALA LYS ILE ILE THR TYR LYS GLU PRO ASP SEQRES 23 A 435 ASN PRO GLU TYR LEU GLU PHE LEU LYS GLN LEU LYS LEU SEQRES 24 A 435 LEU ALA ASP LYS LYS PHE ASN PHE THR VAL GLU ASP GLY SEQRES 25 A 435 LEU LYS ASN ILE ILE PRO ALA SER PHE HIS ASP GLY LEU SEQRES 26 A 435 LEU LEU TYR VAL GLN ALA VAL THR GLU THR LEU ALA GLN SEQRES 27 A 435 GLY GLY THR VAL THR ASP GLY GLU ASN ILE THR GLN ARG SEQRES 28 A 435 MET TRP ASN ARG SER PHE GLN GLY VAL THR GLY TYR LEU SEQRES 29 A 435 LYS ILE ASP ARG ASN GLY ASP ARG ASP THR ASP PHE SER SEQRES 30 A 435 LEU TRP ASP MET ASP PRO GLU THR GLY ALA PHE ARG VAL SEQRES 31 A 435 VAL LEU ASN TYR ASN GLY THR SER GLN GLU LEU MET ALA SEQRES 32 A 435 VAL SER GLU HIS LYS LEU TYR TRP PRO LEU GLY TYR PRO SEQRES 33 A 435 PRO PRO ASP VAL PRO LYS CYS GLY PHE ASP ASN GLU ASP SEQRES 34 A 435 PRO ALA CYS ASN GLN ASP SEQRES 1 B 435 SER ASP LEU THR VAL ALA VAL VAL LEU PRO LEU THR ASN SEQRES 2 B 435 THR SER TYR PRO TRP SER TRP ALA ARG VAL GLY PRO ALA SEQRES 3 B 435 VAL GLU LEU ALA LEU ALA ARG VAL LYS ALA ARG PRO ASP SEQRES 4 B 435 LEU LEU PRO GLY TRP THR VAL ARG MET VAL LEU GLY SER SEQRES 5 B 435 SER GLU ASN ALA ALA GLY VAL CYS SER ASP THR ALA ALA SEQRES 6 B 435 PRO LEU ALA ALA VAL ASP LEU LYS TRP GLU HIS SER PRO SEQRES 7 B 435 ALA VAL PHE LEU GLY PRO GLY CYS VAL TYR SER ALA ALA SEQRES 8 B 435 PRO VAL GLY ARG PHE THR ALA HIS TRP ARG VAL PRO LEU SEQRES 9 B 435 LEU THR ALA GLY ALA PRO ALA LEU GLY ILE GLY VAL LYS SEQRES 10 B 435 ASP GLU TYR ALA LEU THR THR ARG THR GLY PRO SER HIS SEQRES 11 B 435 VAL LYS LEU GLY ASP PHE VAL THR ALA LEU HIS ARG ARG SEQRES 12 B 435 LEU GLY TRP GLU HIS GLN ALA LEU VAL LEU TYR ALA ASP SEQRES 13 B 435 ARG LEU GLY ASP ASP ARG PRO CYS PHE PHE ILE VAL GLU SEQRES 14 B 435 GLY LEU TYR MET ARG VAL ARG GLU ARG LEU ASN ILE THR SEQRES 15 B 435 VAL ASN HIS GLN GLU PHE VAL GLU GLY ASP PRO ASP HIS SEQRES 16 B 435 TYR PRO LYS LEU LEU ARG ALA VAL ARG ARG LYS GLY ARG SEQRES 17 B 435 VAL ILE TYR ILE CYS SER SER PRO ASP ALA PHE ARG ASN SEQRES 18 B 435 LEU MET LEU LEU ALA LEU ASN ALA GLY LEU THR GLY GLU SEQRES 19 B 435 ASP TYR VAL PHE PHE HIS LEU ASP VAL PHE GLY GLN SER SEQRES 20 B 435 LEU LYS SER ALA GLN GLY LEU VAL PRO GLN LYS PRO TRP SEQRES 21 B 435 GLU ARG GLY ASP GLY GLN ASP ARG SER ALA ARG GLN ALA SEQRES 22 B 435 PHE GLN ALA ALA LYS ILE ILE THR TYR LYS GLU PRO ASP SEQRES 23 B 435 ASN PRO GLU TYR LEU GLU PHE LEU LYS GLN LEU LYS LEU SEQRES 24 B 435 LEU ALA ASP LYS LYS PHE ASN PHE THR VAL GLU ASP GLY SEQRES 25 B 435 LEU LYS ASN ILE ILE PRO ALA SER PHE HIS ASP GLY LEU SEQRES 26 B 435 LEU LEU TYR VAL GLN ALA VAL THR GLU THR LEU ALA GLN SEQRES 27 B 435 GLY GLY THR VAL THR ASP GLY GLU ASN ILE THR GLN ARG SEQRES 28 B 435 MET TRP ASN ARG SER PHE GLN GLY VAL THR GLY TYR LEU SEQRES 29 B 435 LYS ILE ASP ARG ASN GLY ASP ARG ASP THR ASP PHE SER SEQRES 30 B 435 LEU TRP ASP MET ASP PRO GLU THR GLY ALA PHE ARG VAL SEQRES 31 B 435 VAL LEU ASN TYR ASN GLY THR SER GLN GLU LEU MET ALA SEQRES 32 B 435 VAL SER GLU HIS LYS LEU TYR TRP PRO LEU GLY TYR PRO SEQRES 33 B 435 PRO PRO ASP VAL PRO LYS CYS GLY PHE ASP ASN GLU ASP SEQRES 34 B 435 PRO ALA CYS ASN GLN ASP SEQRES 1 L 22 CYS PHE GLY GLY ARG MET ASP ARG ILE GLY ALA GLN SER SEQRES 2 L 22 GLY LEU GLY CYS ASN SER PHE ARG TYR HET NAG C 1 14 HET NAG C 2 14 HET MAN C 3 11 HET NAG D 1 14 HET NAG D 2 14 HET MAN D 3 11 HET MAN D 4 11 HET NAG E 1 14 HET NAG E 2 14 HET MAN E 3 11 HET NAG F 1 14 HET NAG F 2 14 HET MAN F 3 11 HET MAN F 4 11 HET CL A 501 1 HET CL B 501 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM CL CHLORIDE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 4 NAG 8(C8 H15 N O6) FORMUL 4 MAN 6(C6 H12 O6) FORMUL 8 CL 2(CL 1-) FORMUL 10 HOH *144(H2 O) HELIX 1 AA1 SER A 19 ARG A 37 1 19 HELIX 2 AA2 THR A 63 SER A 77 1 15 HELIX 3 AA3 CYS A 86 ARG A 101 1 16 HELIX 4 AA4 ALA A 111 VAL A 116 5 6 HELIX 5 AA5 SER A 129 ARG A 143 1 15 HELIX 6 AA6 ARG A 162 LEU A 179 1 18 HELIX 7 AA7 ASP A 194 GLY A 207 1 14 HELIX 8 AA8 SER A 215 ALA A 229 1 15 HELIX 9 AA9 GLN A 266 PHE A 274 1 9 HELIX 10 AB1 ASN A 287 PHE A 305 1 19 HELIX 11 AB2 GLY A 312 LYS A 314 5 3 HELIX 12 AB3 ASN A 315 GLN A 338 1 24 HELIX 13 AB4 ASP A 344 TRP A 353 1 10 HELIX 14 AB5 SER B 19 ARG B 37 1 19 HELIX 15 AB6 THR B 63 SER B 77 1 15 HELIX 16 AB7 CYS B 86 ARG B 101 1 16 HELIX 17 AB8 ALA B 111 VAL B 116 5 6 HELIX 18 AB9 SER B 129 ARG B 143 1 15 HELIX 19 AC1 ARG B 162 LEU B 179 1 18 HELIX 20 AC2 ASP B 194 GLY B 207 1 14 HELIX 21 AC3 SER B 215 ALA B 229 1 15 HELIX 22 AC4 GLN B 266 PHE B 274 1 9 HELIX 23 AC5 ASN B 287 PHE B 305 1 19 HELIX 24 AC6 GLY B 312 LYS B 314 5 3 HELIX 25 AC7 ASN B 315 GLN B 338 1 24 HELIX 26 AC8 ASP B 344 TRP B 353 1 10 HELIX 27 AC9 ASP L 13 ALA L 17 5 5 SHEET 1 AA1 5 ARG A 47 SER A 52 0 SHEET 2 AA1 5 THR A 4 LEU A 9 1 N VAL A 5 O ARG A 47 SHEET 3 AA1 5 VAL A 80 LEU A 82 1 O VAL A 80 N ALA A 6 SHEET 4 AA1 5 LEU A 104 THR A 106 1 O LEU A 105 N PHE A 81 SHEET 5 AA1 5 THR A 123 ARG A 125 1 O THR A 124 N LEU A 104 SHEET 1 AA2 8 THR A 182 PHE A 188 0 SHEET 2 AA2 8 GLN A 149 ALA A 155 1 N ALA A 150 O ASN A 184 SHEET 3 AA2 8 VAL A 209 CYS A 213 1 O TYR A 211 N LEU A 153 SHEET 4 AA2 8 VAL A 237 LEU A 241 1 O PHE A 239 N ILE A 210 SHEET 5 AA2 8 ALA A 277 TYR A 282 1 O ILE A 280 N HIS A 240 SHEET 6 AA2 8 PHE A 376 MET A 381 -1 O TRP A 379 N ILE A 279 SHEET 7 AA2 8 PHE A 388 ASN A 395 -1 O TYR A 394 N PHE A 376 SHEET 8 AA2 8 GLU A 400 ALA A 403 -1 O MET A 402 N ASN A 393 SHEET 1 AA3 2 ARG A 355 GLY A 359 0 SHEET 2 AA3 2 GLY A 362 ILE A 366 -1 O GLY A 362 N GLY A 359 SHEET 1 AA4 5 ARG B 47 SER B 52 0 SHEET 2 AA4 5 THR B 4 LEU B 9 1 N VAL B 5 O ARG B 47 SHEET 3 AA4 5 VAL B 80 LEU B 82 1 O LEU B 82 N VAL B 8 SHEET 4 AA4 5 LEU B 104 THR B 106 1 O LEU B 105 N PHE B 81 SHEET 5 AA4 5 THR B 123 ARG B 125 1 O THR B 124 N LEU B 104 SHEET 1 AA5 8 THR B 182 PHE B 188 0 SHEET 2 AA5 8 GLN B 149 ALA B 155 1 N ALA B 150 O ASN B 184 SHEET 3 AA5 8 VAL B 209 CYS B 213 1 O TYR B 211 N LEU B 153 SHEET 4 AA5 8 VAL B 237 LEU B 241 1 O PHE B 239 N ILE B 210 SHEET 5 AA5 8 ALA B 277 TYR B 282 1 O LYS B 278 N PHE B 238 SHEET 6 AA5 8 PHE B 376 MET B 381 -1 O TRP B 379 N ILE B 279 SHEET 7 AA5 8 PHE B 388 ASN B 395 -1 O ARG B 389 N ASP B 380 SHEET 8 AA5 8 GLU B 400 ALA B 403 -1 O MET B 402 N ASN B 393 SHEET 1 AA6 2 ARG B 355 GLY B 359 0 SHEET 2 AA6 2 GLY B 362 ILE B 366 -1 O GLY B 362 N GLY B 359 SSBOND 1 CYS A 60 CYS A 86 1555 1555 2.04 SSBOND 2 CYS A 164 CYS A 213 1555 1555 2.05 SSBOND 3 CYS B 60 CYS B 86 1555 1555 2.04 SSBOND 4 CYS B 164 CYS B 213 1555 1555 2.05 SSBOND 5 CYS L 7 CYS L 23 1555 1555 2.04 LINK ND2 ASN A 13 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN A 395 C1 NAG D 1 1555 1555 1.44 LINK ND2 ASN B 13 C1 NAG E 1 1555 1555 1.44 LINK ND2 ASN B 395 C1 NAG F 1 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.37 LINK O4 NAG C 2 C1 MAN C 3 1555 1555 1.38 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.37 LINK O4 NAG D 2 C1 MAN D 3 1555 1555 1.38 LINK O3 MAN D 3 C1 MAN D 4 1555 1555 1.37 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.37 LINK O4 NAG E 2 C1 MAN E 3 1555 1555 1.38 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.38 LINK O4 NAG F 2 C1 MAN F 3 1555 1555 1.37 LINK O3 MAN F 3 C1 MAN F 4 1555 1555 1.37 CISPEP 1 GLY A 83 PRO A 84 0 1.75 CISPEP 2 VAL A 255 PRO A 256 0 1.59 CISPEP 3 GLY B 83 PRO B 84 0 3.57 CISPEP 4 VAL B 255 PRO B 256 0 1.02 CRYST1 99.793 99.793 260.397 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010021 0.005785 0.000000 0.00000 SCALE2 0.000000 0.011571 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003840 0.00000