HEADER MEMBRANE PROTEIN 29-MAR-20 7BRK TITLE ATRIAL NATRIURETIC PEPTIDE RECEPTOR COMPLEXED WITH DELETION MUTANT OF TITLE 2 HUMAN ATRIAL NATRIURETIC PEPTIDE[5-27] COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATRIAL NATRIURETIC PEPTIDE RECEPTOR 1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ATRIAL NATRIURETIC PEPTIDE RECEPTOR TYPE A,NPR-A,GUANYLATE COMPND 5 CYCLASE A,GC-A; COMPND 6 EC: 4.6.1.2; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: NATRIURETIC PEPTIDES A; COMPND 10 CHAIN: L; COMPND 11 SYNONYM: CDD-ANF,CARDIODILATIN,CDD,CARDIODILATIN-RELATED PEPTIDE,CDP, COMPND 12 PREPRONATRIODILATIN; COMPND 13 ENGINEERED: YES; COMPND 14 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: NPR1; SOURCE 6 EXPRESSION_SYSTEM: RATTUS NORVEGICUS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10116; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS RECEPTOR-HORMONE COMPLEX, NATRIURETIC PEPTIDE, NATRIURETIC PEPTIDE KEYWDS 2 RECEPTOR, GUANYLYL-CYCLASE-COUPLED RECEPTOR, SIGNAL TRANSMISSION, KEYWDS 3 ROTATION MECHANISM, SIGNALING PROTEIN, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.OGAWA REVDAT 2 29-NOV-23 7BRK 1 REMARK REVDAT 1 31-MAR-21 7BRK 0 JRNL AUTH H.OGAWA JRNL TITL STRUCTURAL INSIGHT INTO HORMONE-RECOGNITION AND JRNL TITL 2 TRANSMEMBRANE SIGNALING BY THE ATRIAL NATRIURETIC PEPTIDE JRNL TITL 3 RECEPTOR JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2_3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.11 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.100 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.4 REMARK 3 NUMBER OF REFLECTIONS : 30550 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.970 REMARK 3 FREE R VALUE TEST SET COUNT : 906 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.1060 - 5.1764 0.79 4315 143 0.1682 0.2458 REMARK 3 2 5.1764 - 4.1097 0.78 4269 136 0.1520 0.1934 REMARK 3 3 4.1097 - 3.5905 0.90 4894 168 0.1477 0.1957 REMARK 3 4 3.5905 - 3.2624 0.96 5283 159 0.1803 0.2296 REMARK 3 5 3.2624 - 3.0286 0.99 5398 149 0.2253 0.2722 REMARK 3 6 3.0286 - 2.8501 1.00 5485 151 0.2703 0.3158 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.370 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.760 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 7468 REMARK 3 ANGLE : 0.800 10166 REMARK 3 CHIRALITY : 0.045 1128 REMARK 3 PLANARITY : 0.005 1312 REMARK 3 DIHEDRAL : 13.033 4422 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.5093 12.0748 -12.6999 REMARK 3 T TENSOR REMARK 3 T11: 0.8333 T22: 0.6277 REMARK 3 T33: 0.7800 T12: -0.1937 REMARK 3 T13: 0.0726 T23: 0.2287 REMARK 3 L TENSOR REMARK 3 L11: 1.9530 L22: 4.9258 REMARK 3 L33: 1.6903 L12: -0.1482 REMARK 3 L13: -0.5814 L23: -0.7442 REMARK 3 S TENSOR REMARK 3 S11: -0.1161 S12: 0.3408 S13: -0.1201 REMARK 3 S21: -0.3646 S22: 0.0241 S23: -1.0155 REMARK 3 S31: -0.1805 S32: 0.6805 S33: 0.0580 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 77 THROUGH 178 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.4474 12.7769 -4.4470 REMARK 3 T TENSOR REMARK 3 T11: 0.7942 T22: 0.2592 REMARK 3 T33: 0.4825 T12: -0.0553 REMARK 3 T13: 0.0463 T23: 0.1157 REMARK 3 L TENSOR REMARK 3 L11: 8.2313 L22: 3.6634 REMARK 3 L33: 2.7201 L12: 0.7005 REMARK 3 L13: 1.2244 L23: -0.5627 REMARK 3 S TENSOR REMARK 3 S11: -0.0196 S12: -0.3761 S13: 0.4671 REMARK 3 S21: 0.5553 S22: -0.1468 S23: 0.3090 REMARK 3 S31: -0.3686 S32: -0.0288 S33: 0.1056 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 179 THROUGH 266 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.9814 8.3871 -19.1527 REMARK 3 T TENSOR REMARK 3 T11: 0.7207 T22: 0.4775 REMARK 3 T33: 0.8468 T12: -0.0441 REMARK 3 T13: -0.1306 T23: 0.1989 REMARK 3 L TENSOR REMARK 3 L11: 5.6701 L22: 5.4372 REMARK 3 L33: 4.9743 L12: 1.0900 REMARK 3 L13: 0.5290 L23: 0.6989 REMARK 3 S TENSOR REMARK 3 S11: -0.7499 S12: 0.5077 S13: 1.2190 REMARK 3 S21: -0.7860 S22: 0.5670 S23: 1.2690 REMARK 3 S31: -0.1421 S32: -0.3278 S33: 0.0706 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 267 THROUGH 426 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.9257 22.7856 -16.0232 REMARK 3 T TENSOR REMARK 3 T11: 1.0032 T22: 0.4650 REMARK 3 T33: 0.8122 T12: -0.0540 REMARK 3 T13: -0.0198 T23: 0.2551 REMARK 3 L TENSOR REMARK 3 L11: 3.1271 L22: 4.4616 REMARK 3 L33: 1.9295 L12: 1.4970 REMARK 3 L13: -0.2372 L23: -0.5102 REMARK 3 S TENSOR REMARK 3 S11: -0.2408 S12: 0.4780 S13: 0.7473 REMARK 3 S21: -0.3498 S22: 0.2267 S23: 0.7029 REMARK 3 S31: -0.5988 S32: -0.1577 S33: 0.0235 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 142 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.2910 -12.8664 8.2043 REMARK 3 T TENSOR REMARK 3 T11: 0.7619 T22: 0.4068 REMARK 3 T33: 0.5622 T12: 0.1321 REMARK 3 T13: 0.0271 T23: 0.1741 REMARK 3 L TENSOR REMARK 3 L11: 3.1325 L22: 4.7088 REMARK 3 L33: 2.3833 L12: -0.5157 REMARK 3 L13: -0.1580 L23: -0.2193 REMARK 3 S TENSOR REMARK 3 S11: -0.0586 S12: 0.0332 S13: 0.0616 REMARK 3 S21: 0.0265 S22: -0.1760 S23: -0.6458 REMARK 3 S31: 0.2982 S32: 0.5734 S33: 0.2653 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 143 THROUGH 266 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.6817 -9.2467 15.4075 REMARK 3 T TENSOR REMARK 3 T11: 0.6234 T22: 0.4162 REMARK 3 T33: 0.7316 T12: 0.0039 REMARK 3 T13: 0.0227 T23: 0.1575 REMARK 3 L TENSOR REMARK 3 L11: 4.6706 L22: 5.9786 REMARK 3 L33: 4.6929 L12: -2.2636 REMARK 3 L13: -1.4844 L23: 0.6645 REMARK 3 S TENSOR REMARK 3 S11: -0.3232 S12: -0.4676 S13: -0.7188 REMARK 3 S21: 0.3748 S22: 0.2571 S23: 1.1613 REMARK 3 S31: 0.2661 S32: -0.2498 S33: 0.0576 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 267 THROUGH 426 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.9237 -22.8011 16.0343 REMARK 3 T TENSOR REMARK 3 T11: 1.0656 T22: 0.4521 REMARK 3 T33: 0.8402 T12: 0.0808 REMARK 3 T13: 0.0539 T23: 0.2599 REMARK 3 L TENSOR REMARK 3 L11: 2.9192 L22: 4.0650 REMARK 3 L33: 2.1176 L12: -1.0932 REMARK 3 L13: 0.1081 L23: -0.5409 REMARK 3 S TENSOR REMARK 3 S11: -0.2253 S12: -0.4390 S13: -0.7701 REMARK 3 S21: 0.4345 S22: 0.2279 S23: 0.6374 REMARK 3 S31: 0.6213 S32: -0.0631 S33: 0.0297 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 5 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.3501 -0.0139 0.0007 REMARK 3 T TENSOR REMARK 3 T11: 1.4533 T22: 0.3856 REMARK 3 T33: 0.2960 T12: 0.0064 REMARK 3 T13: -0.0061 T23: 0.6580 REMARK 3 L TENSOR REMARK 3 L11: 0.0093 L22: 0.0260 REMARK 3 L33: -0.0040 L12: -0.0083 REMARK 3 L13: 0.0036 L23: -0.0085 REMARK 3 S TENSOR REMARK 3 S11: 0.0030 S12: 0.0122 S13: 0.0464 REMARK 3 S21: 0.0107 S22: -0.0815 S23: 0.0761 REMARK 3 S31: -0.0416 S32: 0.1435 S33: 0.0601 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 17 THROUGH 27 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.0183 -0.0084 -0.0020 REMARK 3 T TENSOR REMARK 3 T11: 0.7318 T22: 0.1968 REMARK 3 T33: 0.1021 T12: 0.0516 REMARK 3 T13: 0.0672 T23: 0.7957 REMARK 3 L TENSOR REMARK 3 L11: -0.0070 L22: -0.0066 REMARK 3 L33: -0.0076 L12: -0.0025 REMARK 3 L13: 0.0013 L23: -0.0022 REMARK 3 S TENSOR REMARK 3 S11: 0.0082 S12: -0.0235 S13: 0.0083 REMARK 3 S21: 0.0054 S22: -0.0285 S23: 0.0228 REMARK 3 S31: -0.0016 S32: -0.0261 S33: 0.0077 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7BRK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 31-MAR-20. REMARK 100 THE DEPOSITION ID IS D_1300016351. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-AUG-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.3 - 6.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 716.1 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 716.1 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30557 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.850 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.2 REMARK 200 DATA REDUNDANCY : 15.40 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.93 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.24300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP 11.2.08 REMARK 200 STARTING MODEL: 1DP4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM MALONATE, MES, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 300K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 86.55533 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 173.11067 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 129.83300 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 216.38833 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 43.27767 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, L, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 427 REMARK 465 GLU A 428 REMARK 465 ASP A 429 REMARK 465 PRO A 430 REMARK 465 ALA A 431 REMARK 465 CYS A 432 REMARK 465 ASN A 433 REMARK 465 GLN A 434 REMARK 465 ASP A 435 REMARK 465 ASN B 427 REMARK 465 GLU B 428 REMARK 465 ASP B 429 REMARK 465 PRO B 430 REMARK 465 ALA B 431 REMARK 465 CYS B 432 REMARK 465 ASN B 433 REMARK 465 GLN B 434 REMARK 465 ASP B 435 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 22 O HOH A 602 2.13 REMARK 500 NH1 ARG B 22 O HOH B 602 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 10 99.73 -68.41 REMARK 500 LEU A 41 69.00 36.40 REMARK 500 THR A 63 -53.35 -121.26 REMARK 500 HIS A 148 -63.97 -133.57 REMARK 500 ARG A 204 36.98 -98.59 REMARK 500 ARG A 205 -28.56 -154.25 REMARK 500 ASP A 242 71.90 -114.13 REMARK 500 LYS A 422 -81.49 -58.74 REMARK 500 CYS A 423 61.90 -110.83 REMARK 500 LEU B 41 69.78 39.26 REMARK 500 THR B 63 -51.38 -123.74 REMARK 500 GLU B 147 36.90 -140.71 REMARK 500 HIS B 148 -67.78 -136.75 REMARK 500 ARG B 204 33.86 -96.22 REMARK 500 ARG B 205 -27.54 -151.92 REMARK 500 ASP B 235 -33.12 -130.72 REMARK 500 ASP B 242 69.85 -111.70 REMARK 500 PRO B 421 -169.81 -71.66 REMARK 500 LYS B 422 -83.88 -58.49 REMARK 500 CYS B 423 61.93 -105.96 REMARK 500 ARG L 11 176.04 60.26 REMARK 500 ARG L 11 176.41 58.97 REMARK 500 SER L 19 -9.82 -156.91 REMARK 500 SER L 19 -8.62 -155.84 REMARK 500 LEU L 21 -16.51 83.25 REMARK 500 LEU L 21 -17.33 83.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1DP4 RELATED DB: PDB REMARK 900 RELATED ID: 1T34 RELATED DB: PDB DBREF 7BRK A 1 435 UNP P18910 ANPRA_RAT 29 463 DBREF 7BRK B 1 435 UNP P18910 ANPRA_RAT 29 463 DBREF 7BRK L 1 23 UNP P01160 ANF_HUMAN 124 151 SEQADV 7BRK L UNP P01160 SER 124 DELETION SEQADV 7BRK L UNP P01160 LEU 125 DELETION SEQADV 7BRK L UNP P01160 ARG 126 DELETION SEQADV 7BRK L UNP P01160 ARG 127 DELETION SEQADV 7BRK L UNP P01160 TYR 151 DELETION SEQRES 1 A 435 SER ASP LEU THR VAL ALA VAL VAL LEU PRO LEU THR ASN SEQRES 2 A 435 THR SER TYR PRO TRP SER TRP ALA ARG VAL GLY PRO ALA SEQRES 3 A 435 VAL GLU LEU ALA LEU ALA ARG VAL LYS ALA ARG PRO ASP SEQRES 4 A 435 LEU LEU PRO GLY TRP THR VAL ARG MET VAL LEU GLY SER SEQRES 5 A 435 SER GLU ASN ALA ALA GLY VAL CYS SER ASP THR ALA ALA SEQRES 6 A 435 PRO LEU ALA ALA VAL ASP LEU LYS TRP GLU HIS SER PRO SEQRES 7 A 435 ALA VAL PHE LEU GLY PRO GLY CYS VAL TYR SER ALA ALA SEQRES 8 A 435 PRO VAL GLY ARG PHE THR ALA HIS TRP ARG VAL PRO LEU SEQRES 9 A 435 LEU THR ALA GLY ALA PRO ALA LEU GLY ILE GLY VAL LYS SEQRES 10 A 435 ASP GLU TYR ALA LEU THR THR ARG THR GLY PRO SER HIS SEQRES 11 A 435 VAL LYS LEU GLY ASP PHE VAL THR ALA LEU HIS ARG ARG SEQRES 12 A 435 LEU GLY TRP GLU HIS GLN ALA LEU VAL LEU TYR ALA ASP SEQRES 13 A 435 ARG LEU GLY ASP ASP ARG PRO CYS PHE PHE ILE VAL GLU SEQRES 14 A 435 GLY LEU TYR MET ARG VAL ARG GLU ARG LEU ASN ILE THR SEQRES 15 A 435 VAL ASN HIS GLN GLU PHE VAL GLU GLY ASP PRO ASP HIS SEQRES 16 A 435 TYR PRO LYS LEU LEU ARG ALA VAL ARG ARG LYS GLY ARG SEQRES 17 A 435 VAL ILE TYR ILE CYS SER SER PRO ASP ALA PHE ARG ASN SEQRES 18 A 435 LEU MET LEU LEU ALA LEU ASN ALA GLY LEU THR GLY GLU SEQRES 19 A 435 ASP TYR VAL PHE PHE HIS LEU ASP VAL PHE GLY GLN SER SEQRES 20 A 435 LEU LYS SER ALA GLN GLY LEU VAL PRO GLN LYS PRO TRP SEQRES 21 A 435 GLU ARG GLY ASP GLY GLN ASP ARG SER ALA ARG GLN ALA SEQRES 22 A 435 PHE GLN ALA ALA LYS ILE ILE THR TYR LYS GLU PRO ASP SEQRES 23 A 435 ASN PRO GLU TYR LEU GLU PHE LEU LYS GLN LEU LYS LEU SEQRES 24 A 435 LEU ALA ASP LYS LYS PHE ASN PHE THR VAL GLU ASP GLY SEQRES 25 A 435 LEU LYS ASN ILE ILE PRO ALA SER PHE HIS ASP GLY LEU SEQRES 26 A 435 LEU LEU TYR VAL GLN ALA VAL THR GLU THR LEU ALA GLN SEQRES 27 A 435 GLY GLY THR VAL THR ASP GLY GLU ASN ILE THR GLN ARG SEQRES 28 A 435 MET TRP ASN ARG SER PHE GLN GLY VAL THR GLY TYR LEU SEQRES 29 A 435 LYS ILE ASP ARG ASN GLY ASP ARG ASP THR ASP PHE SER SEQRES 30 A 435 LEU TRP ASP MET ASP PRO GLU THR GLY ALA PHE ARG VAL SEQRES 31 A 435 VAL LEU ASN TYR ASN GLY THR SER GLN GLU LEU MET ALA SEQRES 32 A 435 VAL SER GLU HIS LYS LEU TYR TRP PRO LEU GLY TYR PRO SEQRES 33 A 435 PRO PRO ASP VAL PRO LYS CYS GLY PHE ASP ASN GLU ASP SEQRES 34 A 435 PRO ALA CYS ASN GLN ASP SEQRES 1 B 435 SER ASP LEU THR VAL ALA VAL VAL LEU PRO LEU THR ASN SEQRES 2 B 435 THR SER TYR PRO TRP SER TRP ALA ARG VAL GLY PRO ALA SEQRES 3 B 435 VAL GLU LEU ALA LEU ALA ARG VAL LYS ALA ARG PRO ASP SEQRES 4 B 435 LEU LEU PRO GLY TRP THR VAL ARG MET VAL LEU GLY SER SEQRES 5 B 435 SER GLU ASN ALA ALA GLY VAL CYS SER ASP THR ALA ALA SEQRES 6 B 435 PRO LEU ALA ALA VAL ASP LEU LYS TRP GLU HIS SER PRO SEQRES 7 B 435 ALA VAL PHE LEU GLY PRO GLY CYS VAL TYR SER ALA ALA SEQRES 8 B 435 PRO VAL GLY ARG PHE THR ALA HIS TRP ARG VAL PRO LEU SEQRES 9 B 435 LEU THR ALA GLY ALA PRO ALA LEU GLY ILE GLY VAL LYS SEQRES 10 B 435 ASP GLU TYR ALA LEU THR THR ARG THR GLY PRO SER HIS SEQRES 11 B 435 VAL LYS LEU GLY ASP PHE VAL THR ALA LEU HIS ARG ARG SEQRES 12 B 435 LEU GLY TRP GLU HIS GLN ALA LEU VAL LEU TYR ALA ASP SEQRES 13 B 435 ARG LEU GLY ASP ASP ARG PRO CYS PHE PHE ILE VAL GLU SEQRES 14 B 435 GLY LEU TYR MET ARG VAL ARG GLU ARG LEU ASN ILE THR SEQRES 15 B 435 VAL ASN HIS GLN GLU PHE VAL GLU GLY ASP PRO ASP HIS SEQRES 16 B 435 TYR PRO LYS LEU LEU ARG ALA VAL ARG ARG LYS GLY ARG SEQRES 17 B 435 VAL ILE TYR ILE CYS SER SER PRO ASP ALA PHE ARG ASN SEQRES 18 B 435 LEU MET LEU LEU ALA LEU ASN ALA GLY LEU THR GLY GLU SEQRES 19 B 435 ASP TYR VAL PHE PHE HIS LEU ASP VAL PHE GLY GLN SER SEQRES 20 B 435 LEU LYS SER ALA GLN GLY LEU VAL PRO GLN LYS PRO TRP SEQRES 21 B 435 GLU ARG GLY ASP GLY GLN ASP ARG SER ALA ARG GLN ALA SEQRES 22 B 435 PHE GLN ALA ALA LYS ILE ILE THR TYR LYS GLU PRO ASP SEQRES 23 B 435 ASN PRO GLU TYR LEU GLU PHE LEU LYS GLN LEU LYS LEU SEQRES 24 B 435 LEU ALA ASP LYS LYS PHE ASN PHE THR VAL GLU ASP GLY SEQRES 25 B 435 LEU LYS ASN ILE ILE PRO ALA SER PHE HIS ASP GLY LEU SEQRES 26 B 435 LEU LEU TYR VAL GLN ALA VAL THR GLU THR LEU ALA GLN SEQRES 27 B 435 GLY GLY THR VAL THR ASP GLY GLU ASN ILE THR GLN ARG SEQRES 28 B 435 MET TRP ASN ARG SER PHE GLN GLY VAL THR GLY TYR LEU SEQRES 29 B 435 LYS ILE ASP ARG ASN GLY ASP ARG ASP THR ASP PHE SER SEQRES 30 B 435 LEU TRP ASP MET ASP PRO GLU THR GLY ALA PHE ARG VAL SEQRES 31 B 435 VAL LEU ASN TYR ASN GLY THR SER GLN GLU LEU MET ALA SEQRES 32 B 435 VAL SER GLU HIS LYS LEU TYR TRP PRO LEU GLY TYR PRO SEQRES 33 B 435 PRO PRO ASP VAL PRO LYS CYS GLY PHE ASP ASN GLU ASP SEQRES 34 B 435 PRO ALA CYS ASN GLN ASP SEQRES 1 L 23 SER SER CYS PHE GLY GLY ARG MET ASP ARG ILE GLY ALA SEQRES 2 L 23 GLN SER GLY LEU GLY CYS ASN SER PHE ARG HET NAG C 1 14 HET NAG C 2 14 HET MAN C 3 11 HET NAG D 1 14 HET NAG D 2 14 HET MAN D 3 11 HET MAN D 4 11 HET NAG E 1 14 HET NAG E 2 14 HET MAN E 3 11 HET NAG F 1 14 HET NAG F 2 14 HET MAN F 3 11 HET MAN F 4 11 HET CL A 508 1 HET CL B 508 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM CL CHLORIDE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 4 NAG 8(C8 H15 N O6) FORMUL 4 MAN 6(C6 H12 O6) FORMUL 8 CL 2(CL 1-) FORMUL 10 HOH *110(H2 O) HELIX 1 AA1 SER A 19 ARG A 37 1 19 HELIX 2 AA2 THR A 63 SER A 77 1 15 HELIX 3 AA3 CYS A 86 ARG A 101 1 16 HELIX 4 AA4 ALA A 111 VAL A 116 5 6 HELIX 5 AA5 SER A 129 GLY A 145 1 17 HELIX 6 AA6 ARG A 162 ASN A 180 1 19 HELIX 7 AA7 ASP A 194 GLY A 207 1 14 HELIX 8 AA8 SER A 215 ALA A 229 1 15 HELIX 9 AA9 GLN A 266 PHE A 274 1 9 HELIX 10 AB1 ASN A 287 PHE A 305 1 19 HELIX 11 AB2 GLY A 312 LYS A 314 5 3 HELIX 12 AB3 ASN A 315 GLN A 338 1 24 HELIX 13 AB4 ASP A 344 TRP A 353 1 10 HELIX 14 AB5 SER B 19 ARG B 37 1 19 HELIX 15 AB6 THR B 63 SER B 77 1 15 HELIX 16 AB7 CYS B 86 ARG B 101 1 16 HELIX 17 AB8 ALA B 111 VAL B 116 5 6 HELIX 18 AB9 SER B 129 GLY B 145 1 17 HELIX 19 AC1 ARG B 162 LEU B 179 1 18 HELIX 20 AC2 ASP B 194 GLY B 207 1 14 HELIX 21 AC3 SER B 215 ALA B 229 1 15 HELIX 22 AC4 GLN B 266 PHE B 274 1 9 HELIX 23 AC5 ASN B 287 LYS B 304 1 18 HELIX 24 AC6 GLY B 312 LYS B 314 5 3 HELIX 25 AC7 ASN B 315 GLN B 338 1 24 HELIX 26 AC8 ASP B 344 TRP B 353 1 10 HELIX 27 AC9 ASP L 13 ALA L 17 5 5 SHEET 1 AA1 5 ARG A 47 SER A 52 0 SHEET 2 AA1 5 THR A 4 LEU A 9 1 N VAL A 5 O ARG A 47 SHEET 3 AA1 5 VAL A 80 LEU A 82 1 O VAL A 80 N ALA A 6 SHEET 4 AA1 5 LEU A 104 THR A 106 1 O LEU A 105 N PHE A 81 SHEET 5 AA1 5 THR A 123 ARG A 125 1 O THR A 124 N LEU A 104 SHEET 1 AA2 8 THR A 182 PHE A 188 0 SHEET 2 AA2 8 GLN A 149 ALA A 155 1 N ALA A 150 O THR A 182 SHEET 3 AA2 8 VAL A 209 CYS A 213 1 O TYR A 211 N LEU A 153 SHEET 4 AA2 8 VAL A 237 LEU A 241 1 O PHE A 239 N ILE A 210 SHEET 5 AA2 8 ALA A 277 TYR A 282 1 O LYS A 278 N HIS A 240 SHEET 6 AA2 8 PHE A 376 MET A 381 -1 O SER A 377 N THR A 281 SHEET 7 AA2 8 PHE A 388 ASN A 395 -1 O TYR A 394 N PHE A 376 SHEET 8 AA2 8 GLU A 400 ALA A 403 -1 O MET A 402 N ASN A 393 SHEET 1 AA3 2 ARG A 355 GLY A 359 0 SHEET 2 AA3 2 GLY A 362 ILE A 366 -1 O ILE A 366 N ARG A 355 SHEET 1 AA4 5 ARG B 47 SER B 52 0 SHEET 2 AA4 5 THR B 4 LEU B 9 1 N VAL B 5 O ARG B 47 SHEET 3 AA4 5 VAL B 80 LEU B 82 1 O VAL B 80 N ALA B 6 SHEET 4 AA4 5 LEU B 104 THR B 106 1 O LEU B 105 N PHE B 81 SHEET 5 AA4 5 THR B 123 ARG B 125 1 O THR B 124 N LEU B 104 SHEET 1 AA5 8 THR B 182 PHE B 188 0 SHEET 2 AA5 8 GLN B 149 ALA B 155 1 N VAL B 152 O ASN B 184 SHEET 3 AA5 8 VAL B 209 CYS B 213 1 O TYR B 211 N LEU B 153 SHEET 4 AA5 8 VAL B 237 LEU B 241 1 O PHE B 239 N ILE B 210 SHEET 5 AA5 8 ALA B 277 TYR B 282 1 O LYS B 278 N PHE B 238 SHEET 6 AA5 8 PHE B 376 MET B 381 -1 O TRP B 379 N ILE B 279 SHEET 7 AA5 8 PHE B 388 ASN B 395 -1 O TYR B 394 N PHE B 376 SHEET 8 AA5 8 GLU B 400 ALA B 403 -1 O MET B 402 N ASN B 393 SHEET 1 AA6 2 ARG B 355 GLY B 359 0 SHEET 2 AA6 2 GLY B 362 ILE B 366 -1 O LEU B 364 N PHE B 357 SSBOND 1 CYS A 60 CYS A 86 1555 1555 2.04 SSBOND 2 CYS A 164 CYS A 213 1555 1555 2.04 SSBOND 3 CYS B 60 CYS B 86 1555 1555 2.04 SSBOND 4 CYS B 164 CYS B 213 1555 1555 2.05 SSBOND 5 CYS L 7 CYS L 23 1555 1555 2.03 LINK ND2 ASN A 13 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN A 395 C1 NAG D 1 1555 1555 1.44 LINK ND2 ASN B 13 C1 NAG E 1 1555 1555 1.44 LINK ND2 ASN B 395 C1 NAG F 1 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.37 LINK O4 NAG C 2 C1 MAN C 3 1555 1555 1.38 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.38 LINK O4 NAG D 2 C1 MAN D 3 1555 1555 1.38 LINK O3 MAN D 3 C1 MAN D 4 1555 1555 1.37 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.38 LINK O4 NAG E 2 C1 MAN E 3 1555 1555 1.38 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.38 LINK O4 NAG F 2 C1 MAN F 3 1555 1555 1.38 LINK O3 MAN F 3 C1 MAN F 4 1555 1555 1.37 CISPEP 1 GLY A 83 PRO A 84 0 1.23 CISPEP 2 VAL A 255 PRO A 256 0 1.46 CISPEP 3 GLY B 83 PRO B 84 0 3.16 CISPEP 4 VAL B 255 PRO B 256 0 1.16 CRYST1 99.419 99.419 259.666 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010058 0.005807 0.000000 0.00000 SCALE2 0.000000 0.011614 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003851 0.00000