HEADER VIRAL PROTEIN/IMMUNE SYSTEM 30-MAR-20 7BSC TITLE COMPLEX STRUCTURE OF 1G5.3 FAB BOUND TO DENV2 NS1C COMPND MOL_ID: 1; COMPND 2 MOLECULE: NON-STRUCTURAL PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: NS1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: 1G5.3 FAB HEAVY CHAIN; COMPND 8 CHAIN: H; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: 1G5.3 FAB LIGHT CHAIN; COMPND 12 CHAIN: L; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DENGUE VIRUS 2; SOURCE 3 ORGANISM_TAXID: 11060; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_TAXID: 9606; SOURCE 10 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 12 MOL_ID: 3; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS DENGUE VIRUS, NS1, ANTIBODY, VIRAL PROTEIN, VIRAL PROTEIN-IMMUNE KEYWDS 2 SYSTEM COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR H.SONG,J.QI,F.G.GAO REVDAT 3 29-NOV-23 7BSC 1 REMARK REVDAT 2 20-JAN-21 7BSC 1 JRNL REVDAT 1 23-DEC-20 7BSC 0 JRNL AUTH N.MODHIRAN,H.SONG,L.LIU,C.BLETCHLY,L.BRILLAULT,A.A.AMARILLA, JRNL AUTH 2 X.XU,J.QI,Y.CHAI,S.T.M.CHEUNG,R.TRAVES,Y.X.SETOH,S.BIBBY, JRNL AUTH 3 C.A.P.SCOTT,M.E.FRENEY,N.D.NEWTON,A.A.KHROMYKH,K.J.CHAPPELL, JRNL AUTH 4 D.A.MULLER,K.J.STACEY,M.J.LANDSBERG,Y.SHI,G.F.GAO,P.R.YOUNG, JRNL AUTH 5 D.WATTERSON JRNL TITL A BROADLY PROTECTIVE ANTIBODY THAT TARGETS THE FLAVIVIRUS JRNL TITL 2 NS1 PROTEIN. JRNL REF SCIENCE V. 371 190 2021 JRNL REFN ESSN 1095-9203 JRNL PMID 33414219 JRNL DOI 10.1126/SCIENCE.ABB9425 REMARK 2 REMARK 2 RESOLUTION. 2.31 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.31 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.32 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 3 NUMBER OF REFLECTIONS : 39329 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 1978 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.3200 - 5.5600 0.99 2988 161 0.2061 0.2231 REMARK 3 2 5.5600 - 4.4100 0.99 2826 146 0.1576 0.1944 REMARK 3 3 4.4100 - 3.8500 0.99 2778 146 0.1723 0.2019 REMARK 3 4 3.8500 - 3.5000 0.99 2734 168 0.1960 0.2166 REMARK 3 5 3.5000 - 3.2500 0.98 2731 139 0.2070 0.2494 REMARK 3 6 3.2500 - 3.0600 0.96 2701 139 0.2155 0.2476 REMARK 3 7 3.0600 - 2.9100 0.96 2630 136 0.2226 0.2419 REMARK 3 8 2.9100 - 2.7800 0.96 2604 138 0.2306 0.2593 REMARK 3 9 2.7800 - 2.6700 0.96 2644 140 0.2381 0.2654 REMARK 3 10 2.6700 - 2.5800 0.94 2570 144 0.2425 0.2844 REMARK 3 11 2.5800 - 2.5000 0.95 2598 138 0.2366 0.3280 REMARK 3 12 2.5000 - 2.4300 0.93 2540 121 0.2387 0.2490 REMARK 3 13 2.4300 - 2.3600 0.94 2563 140 0.2332 0.2641 REMARK 3 14 2.3600 - 2.3100 0.90 2444 122 0.2372 0.2848 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.201 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.818 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.11 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 4840 REMARK 3 ANGLE : 0.683 6585 REMARK 3 CHIRALITY : 0.276 727 REMARK 3 PLANARITY : 0.004 839 REMARK 3 DIHEDRAL : 22.115 1768 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 4.9308 -34.4314 -20.2247 REMARK 3 T TENSOR REMARK 3 T11: 0.1801 T22: 0.1938 REMARK 3 T33: 0.1364 T12: -0.0043 REMARK 3 T13: 0.0012 T23: 0.0089 REMARK 3 L TENSOR REMARK 3 L11: 0.4199 L22: 0.4632 REMARK 3 L33: 1.6263 L12: 0.0754 REMARK 3 L13: -0.3804 L23: 0.0918 REMARK 3 S TENSOR REMARK 3 S11: 0.0210 S12: -0.1059 S13: -0.0251 REMARK 3 S21: 0.1026 S22: 0.0197 S23: -0.0016 REMARK 3 S31: 0.0179 S32: 0.1246 S33: -0.0358 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN H REMARK 3 ORIGIN FOR THE GROUP (A): 11.9800 -13.7933 -64.5421 REMARK 3 T TENSOR REMARK 3 T11: 0.1586 T22: 0.1272 REMARK 3 T33: 0.2033 T12: -0.0054 REMARK 3 T13: 0.0133 T23: -0.0174 REMARK 3 L TENSOR REMARK 3 L11: 0.3369 L22: 0.2836 REMARK 3 L33: 0.7154 L12: -0.0598 REMARK 3 L13: 0.1428 L23: -0.2153 REMARK 3 S TENSOR REMARK 3 S11: 0.0477 S12: 0.0235 S13: 0.0084 REMARK 3 S21: 0.0319 S22: -0.0108 S23: 0.0480 REMARK 3 S31: -0.1037 S32: 0.0579 S33: -0.0327 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN L REMARK 3 ORIGIN FOR THE GROUP (A): 25.0312 -24.5469 -70.9047 REMARK 3 T TENSOR REMARK 3 T11: 0.1599 T22: 0.1736 REMARK 3 T33: 0.2223 T12: 0.0192 REMARK 3 T13: -0.0020 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 0.2379 L22: 0.1639 REMARK 3 L33: 1.0460 L12: 0.1004 REMARK 3 L13: -0.2636 L23: -0.1636 REMARK 3 S TENSOR REMARK 3 S11: 0.0143 S12: -0.0110 S13: 0.0438 REMARK 3 S21: -0.0228 S22: -0.0173 S23: -0.0128 REMARK 3 S31: 0.0288 S32: 0.0900 S33: 0.0076 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7BSC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-APR-20. REMARK 100 THE DEPOSITION ID IS D_1300016373. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-MAR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97774 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39747 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 12.70 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4O6B REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M DL-MALIC ACID PH 7.0, 12% W/V REMARK 280 POLYETHYLENE GLYCOL 3350, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,-Y,-Z+1/2 REMARK 290 4555 -X+1/2,-Y,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 20.93050 REMARK 290 SMTRY2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 132.37700 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 20.93050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 132.37700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 172 REMARK 465 GLU A 173 REMARK 465 LYS A 174 REMARK 465 GLN A 175 REMARK 465 SER H 153 REMARK 465 SER H 154 REMARK 465 LYS H 155 REMARK 465 SER H 156 REMARK 465 THR H 157 REMARK 465 SER H 158 REMARK 465 SER H 241 REMARK 465 CYS H 242 REMARK 465 GLY L 235 REMARK 465 GLU L 236 REMARK 465 CYS L 237 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 519 O HOH H 359 1.82 REMARK 500 O HOH H 354 O HOH H 465 1.84 REMARK 500 NE2 GLN L 222 O HOH L 301 1.89 REMARK 500 O HOH A 529 O HOH A 532 1.92 REMARK 500 OE2 GLU H 108 O HOH H 301 1.93 REMARK 500 OE2 GLU L 184 O HOH L 302 1.97 REMARK 500 O HOH H 343 O HOH H 418 1.98 REMARK 500 O HOH L 466 O HOH L 477 1.98 REMARK 500 O HOH H 487 O HOH H 489 1.99 REMARK 500 O HOH H 467 O HOH L 427 1.99 REMARK 500 O TYR H 79 O HOH H 302 1.99 REMARK 500 O HOH A 499 O HOH A 525 1.99 REMARK 500 O HOH H 481 O HOH H 487 2.00 REMARK 500 O HOH A 496 O HOH A 514 2.01 REMARK 500 O HOH H 460 O HOH H 467 2.04 REMARK 500 O HOH A 411 O HOH L 357 2.05 REMARK 500 N THR L 152 O HOH L 303 2.05 REMARK 500 O HOH A 401 O HOH A 455 2.06 REMARK 500 OG1 THR L 203 O HOH L 304 2.07 REMARK 500 NZ LYS L 62 O HOH L 305 2.09 REMARK 500 OE1 GLU A 340 O HOH A 401 2.09 REMARK 500 O LEU H 215 O HOH H 303 2.10 REMARK 500 O HOH L 320 O HOH L 462 2.10 REMARK 500 O HOH H 446 O HOH L 318 2.10 REMARK 500 NH2 ARG A 294 OE2 GLU A 334 2.12 REMARK 500 OE1 GLN H 131 O HOH H 304 2.13 REMARK 500 O PRO H 228 O HOH H 305 2.13 REMARK 500 O HOH A 491 O HOH A 497 2.13 REMARK 500 O CYS A 316 O HOH A 402 2.14 REMARK 500 O HOH H 315 O HOH H 411 2.14 REMARK 500 O GLY H 200 O HOH H 306 2.15 REMARK 500 NZ LYS H 236 O HOH H 307 2.17 REMARK 500 OG SER A 315 O HOH A 403 2.19 REMARK 500 O HOH H 408 O HOH H 474 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 515 O HOH H 459 3444 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 222 CB SER A 222 OG 0.095 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 208 -5.65 73.74 REMARK 500 ASN A 255 31.68 -98.18 REMARK 500 ASN H 63 -0.92 77.20 REMARK 500 TYR H 121 54.72 -91.38 REMARK 500 ALA L 74 -4.31 74.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS A 189 ASP A 190 -142.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH H 498 DISTANCE = 5.82 ANGSTROMS REMARK 525 HOH H 499 DISTANCE = 5.82 ANGSTROMS DBREF 7BSC A 172 352 UNP Q6TFL7 Q6TFL7_9FLAV 172 352 DBREF 7BSC H 20 242 PDB 7BSC 7BSC 20 242 DBREF 7BSC L 20 237 PDB 7BSC 7BSC 20 237 SEQRES 1 A 181 LYS GLU LYS GLN ASP VAL PHE CYS ASP SER LYS LEU MET SEQRES 2 A 181 SER ALA ALA ILE LYS ASP ASN ARG ALA VAL HIS ALA ASP SEQRES 3 A 181 MET GLY TYR TRP ILE GLU SER ALA LEU ASN ASP THR TRP SEQRES 4 A 181 LYS ILE GLU LYS ALA SER PHE ILE GLU VAL LYS SER CYS SEQRES 5 A 181 HIS TRP PRO LYS SER HIS THR LEU TRP SER ASN GLY VAL SEQRES 6 A 181 LEU GLU SER GLU MET ILE ILE PRO LYS ASN PHE ALA GLY SEQRES 7 A 181 PRO VAL SER GLN HIS ASN TYR ARG PRO GLY TYR HIS THR SEQRES 8 A 181 GLN THR ALA GLY PRO TRP HIS LEU GLY SER LEU GLU MET SEQRES 9 A 181 ASP PHE ASP PHE CYS GLU GLY THR THR VAL VAL VAL THR SEQRES 10 A 181 GLU ASP CYS GLY ASN ARG GLY PRO SER LEU ARG THR THR SEQRES 11 A 181 THR ALA SER GLY LYS LEU ILE THR GLU TRP CYS CYS ARG SEQRES 12 A 181 SER CYS THR LEU PRO PRO LEU ARG TYR ARG GLY GLU ASP SEQRES 13 A 181 GLY CYS TRP TYR GLY MET GLU ILE ARG PRO LEU LYS GLU SEQRES 14 A 181 LYS GLU GLU ASN LEU VAL ASN SER LEU VAL THR ALA SEQRES 1 H 223 GLU VAL LYS LEU GLN GLU SER GLY PRO GLY LEU VAL ARG SEQRES 2 H 223 PRO SER GLN SER LEU SER LEU THR CYS SER VAL THR GLY SEQRES 3 H 223 TYR SER ILE THR SER GLY TYR TYR TRP ASN TRP ILE ARG SEQRES 4 H 223 GLN PHE PRO GLY ASN LYS LEU GLU TRP MET GLY TYR ILE SEQRES 5 H 223 SER TYR ASP GLY ARG SER ASN TYR ASN PRO SER LEU LYS SEQRES 6 H 223 ASN ARG ILE SER ILE THR ARG ASP THR SER LYS ASN GLN SEQRES 7 H 223 PHE PHE LEU LYS LEU ASN PHE VAL THR THR GLU ASP THR SEQRES 8 H 223 ALA THR TYR TYR CYS ALA SER PHE TYR TYR TYR THR SER SEQRES 9 H 223 ARG PRO LEU VAL TYR TRP GLY GLN GLY THR LEU LEU THR SEQRES 10 H 223 VAL SER SER ALA SER THR LYS GLY PRO SER VAL PHE PRO SEQRES 11 H 223 LEU ALA PRO SER SER LYS SER THR SER GLY GLY THR ALA SEQRES 12 H 223 ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO SEQRES 13 H 223 VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SER GLY SEQRES 14 H 223 VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU SEQRES 15 H 223 TYR SER LEU SER SER VAL VAL THR VAL PRO SER SER SER SEQRES 16 H 223 LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS SEQRES 17 H 223 PRO SER ASN THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SEQRES 18 H 223 SER CYS SEQRES 1 L 218 GLU ILE VAL LEU THR GLN SER PRO ALA SER LEU ALA VAL SEQRES 2 L 218 SER LEU GLY GLN ARG ALA THR ILE SER CYS ARG ALA SER SEQRES 3 L 218 GLU SER VAL GLU TYR SER GLY THR SER LEU MET HIS TRP SEQRES 4 L 218 TYR GLN GLN LYS PRO GLY GLN PRO PRO LYS LEU LEU ILE SEQRES 5 L 218 TYR ALA ALA SER ASN VAL GLU SER GLY VAL PRO ALA ARG SEQRES 6 L 218 PHE SER GLY SER GLY SER GLY THR ASP PHE SER LEU ASN SEQRES 7 L 218 ILE HIS PRO VAL GLU GLU ASP ASP ILE ALA MET TYR PHE SEQRES 8 L 218 CYS GLN GLN SER ARG LYS VAL PRO TYR THR PHE GLY GLY SEQRES 9 L 218 GLY THR LYS LEU GLU LEU LYS ARG THR VAL ALA ALA PRO SEQRES 10 L 218 SER VAL PHE ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SEQRES 11 L 218 SER GLY THR ALA SER VAL VAL CYS LEU LEU ASN ASN PHE SEQRES 12 L 218 TYR PRO ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN SEQRES 13 L 218 ALA LEU GLN SER GLY ASN SER GLN GLU SER VAL THR GLU SEQRES 14 L 218 GLN ASP SER LYS ASP SER THR TYR SER LEU SER SER THR SEQRES 15 L 218 LEU THR LEU SER LYS ALA ASP TYR GLU LYS HIS LYS VAL SEQRES 16 L 218 TYR ALA CYS GLU VAL THR HIS GLN GLY LEU SER SER PRO SEQRES 17 L 218 VAL THR LYS SER PHE ASN ARG GLY GLU CYS FORMUL 4 HOH *530(H2 O) HELIX 1 AA1 PRO A 226 THR A 230 5 5 HELIX 2 AA2 LEU A 237 MET A 241 5 5 HELIX 3 AA3 PRO A 244 ALA A 248 5 5 HELIX 4 AA4 SER A 252 TYR A 256 5 5 HELIX 5 AA5 PRO A 267 GLY A 271 5 5 HELIX 6 AA6 ASN A 344 LEU A 349 5 6 HELIX 7 AA7 PRO H 81 LYS H 84 5 4 HELIX 8 AA8 THR H 106 THR H 110 5 5 HELIX 9 AA9 SER H 182 ALA H 184 5 3 HELIX 10 AB1 SER H 213 GLY H 216 5 4 HELIX 11 AB2 LYS H 227 ASN H 230 5 4 HELIX 12 AB3 GLU L 102 ILE L 106 5 5 HELIX 13 AB4 SER L 144 GLY L 151 1 8 HELIX 14 AB5 LYS L 206 LYS L 211 1 6 SHEET 1 AA1 7 SER A 185 LYS A 189 0 SHEET 2 AA1 7 ARG A 192 ALA A 196 -1 O ARG A 192 N LYS A 189 SHEET 3 AA1 7 TYR A 200 LEU A 206 -1 O ILE A 202 N HIS A 195 SHEET 4 AA1 7 TRP A 210 PHE A 217 -1 O LYS A 214 N GLU A 203 SHEET 5 AA1 7 LEU A 273 PHE A 277 -1 O MET A 275 N ALA A 215 SHEET 6 AA1 7 LEU A 321 GLY A 325 -1 O ARG A 322 N ASP A 276 SHEET 7 AA1 7 GLY A 328 TYR A 331 -1 O GLY A 328 N GLY A 325 SHEET 1 AA2 3 THR A 284 VAL A 287 0 SHEET 2 AA2 3 GLU A 310 CYS A 313 1 O TRP A 311 N VAL A 286 SHEET 3 AA2 3 ILE A 335 PRO A 337 -1 O ARG A 336 N CYS A 312 SHEET 1 AA3 4 LYS H 22 SER H 26 0 SHEET 2 AA3 4 LEU H 37 THR H 44 -1 O SER H 42 N GLN H 24 SHEET 3 AA3 4 GLN H 97 LEU H 102 -1 O LEU H 100 N LEU H 39 SHEET 4 AA3 4 ILE H 87 ASP H 92 -1 N ASP H 92 O GLN H 97 SHEET 1 AA4 6 LEU H 30 VAL H 31 0 SHEET 2 AA4 6 THR H 133 VAL H 137 1 O THR H 136 N VAL H 31 SHEET 3 AA4 6 ALA H 111 TYR H 119 -1 N TYR H 113 O THR H 133 SHEET 4 AA4 6 TYR H 52 GLN H 59 -1 N ILE H 57 O TYR H 114 SHEET 5 AA4 6 LEU H 65 ILE H 71 -1 O ILE H 71 N TRP H 54 SHEET 6 AA4 6 SER H 77 TYR H 79 -1 O ASN H 78 N TYR H 70 SHEET 1 AA5 4 LEU H 30 VAL H 31 0 SHEET 2 AA5 4 THR H 133 VAL H 137 1 O THR H 136 N VAL H 31 SHEET 3 AA5 4 ALA H 111 TYR H 119 -1 N TYR H 113 O THR H 133 SHEET 4 AA5 4 TYR H 128 TRP H 129 -1 O TYR H 128 N SER H 117 SHEET 1 AA6 4 SER H 146 LEU H 150 0 SHEET 2 AA6 4 THR H 161 TYR H 171 -1 O LEU H 167 N PHE H 148 SHEET 3 AA6 4 TYR H 202 PRO H 211 -1 O TYR H 202 N TYR H 171 SHEET 4 AA6 4 VAL H 189 THR H 191 -1 N HIS H 190 O VAL H 207 SHEET 1 AA7 4 SER H 146 LEU H 150 0 SHEET 2 AA7 4 THR H 161 TYR H 171 -1 O LEU H 167 N PHE H 148 SHEET 3 AA7 4 TYR H 202 PRO H 211 -1 O TYR H 202 N TYR H 171 SHEET 4 AA7 4 VAL H 195 LEU H 196 -1 N VAL H 195 O SER H 203 SHEET 1 AA8 3 THR H 177 TRP H 180 0 SHEET 2 AA8 3 ILE H 221 HIS H 226 -1 O ASN H 223 N SER H 179 SHEET 3 AA8 3 THR H 231 LYS H 236 -1 O LYS H 235 N CYS H 222 SHEET 1 AA9 4 LEU L 23 SER L 26 0 SHEET 2 AA9 4 ALA L 38 ALA L 44 -1 O ARG L 43 N THR L 24 SHEET 3 AA9 4 ASP L 93 ILE L 98 -1 O ILE L 98 N ALA L 38 SHEET 4 AA9 4 PHE L 85 SER L 90 -1 N SER L 86 O ASN L 97 SHEET 1 AB1 6 SER L 29 VAL L 32 0 SHEET 2 AB1 6 THR L 125 LEU L 129 1 O LYS L 126 N LEU L 30 SHEET 3 AB1 6 MET L 108 GLN L 113 -1 N TYR L 109 O THR L 125 SHEET 4 AB1 6 MET L 56 GLN L 61 -1 N TYR L 59 O PHE L 110 SHEET 5 AB1 6 LYS L 68 TYR L 72 -1 O LYS L 68 N GLN L 60 SHEET 6 AB1 6 ASN L 76 VAL L 77 -1 O ASN L 76 N TYR L 72 SHEET 1 AB2 4 SER L 29 VAL L 32 0 SHEET 2 AB2 4 THR L 125 LEU L 129 1 O LYS L 126 N LEU L 30 SHEET 3 AB2 4 MET L 108 GLN L 113 -1 N TYR L 109 O THR L 125 SHEET 4 AB2 4 THR L 120 PHE L 121 -1 O THR L 120 N GLN L 113 SHEET 1 AB3 2 GLU L 49 TYR L 50 0 SHEET 2 AB3 2 THR L 53 SER L 54 -1 O THR L 53 N TYR L 50 SHEET 1 AB4 4 SER L 137 PHE L 141 0 SHEET 2 AB4 4 THR L 152 PHE L 162 -1 O LEU L 158 N PHE L 139 SHEET 3 AB4 4 TYR L 196 SER L 205 -1 O TYR L 196 N PHE L 162 SHEET 4 AB4 4 SER L 182 VAL L 186 -1 N SER L 185 O SER L 199 SHEET 1 AB5 4 ALA L 176 LEU L 177 0 SHEET 2 AB5 4 LYS L 168 VAL L 173 -1 N VAL L 173 O ALA L 176 SHEET 3 AB5 4 VAL L 214 THR L 220 -1 O THR L 220 N LYS L 168 SHEET 4 AB5 4 VAL L 228 ASN L 233 -1 O VAL L 228 N VAL L 219 SSBOND 1 CYS A 179 CYS A 223 1555 1555 2.04 SSBOND 2 CYS A 280 CYS A 329 1555 1555 2.03 SSBOND 3 CYS A 291 CYS A 312 1555 1555 2.03 SSBOND 4 CYS A 313 CYS A 316 1555 1555 2.03 SSBOND 5 CYS H 41 CYS H 115 1555 1555 2.04 SSBOND 6 CYS H 166 CYS H 222 1555 1555 2.04 SSBOND 7 CYS L 42 CYS L 111 1555 1555 2.04 SSBOND 8 CYS L 157 CYS L 217 1555 1555 2.03 CISPEP 1 LEU A 318 PRO A 319 0 -1.68 CISPEP 2 PHE H 172 PRO H 173 0 -7.51 CISPEP 3 GLU H 174 PRO H 175 0 -1.24 CISPEP 4 SER L 26 PRO L 27 0 -6.51 CISPEP 5 HIS L 99 PRO L 100 0 -4.34 CISPEP 6 VAL L 117 PRO L 118 0 4.61 CISPEP 7 TYR L 163 PRO L 164 0 4.83 CRYST1 41.861 80.980 264.754 90.00 90.00 90.00 P 21 2 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023889 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012349 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003777 0.00000