HEADER OXIDOREDUCTASE 03-APR-20 7BU3 TITLE STRUCTURE OF ALCOHOL DEHYDROGENASE YJGB IN COMPLEX WITH NADP FROM TITLE 2 ESCHERICHIA COLI COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALCOHOL DEHYDROGENASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ALDEHYDE REDUCTASE AHR,NADPH-DEPENDENT ALDEHYDE REDUCTASE COMPND 5 AHR; COMPND 6 EC: 1.1.1.2; COMPND 7 ENGINEERED: YES; COMPND 8 OTHER_DETAILS: SF FILE CONTAINS FRIEDEL PAIRS.; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: ALCOHOL DEHYDROGENASE; COMPND 11 CHAIN: B; COMPND 12 SYNONYM: ALDEHYDE REDUCTASE AHR,ALDEHYDE REDUCTASE,NADPH-DEPENDENT, COMPND 13 ZN-CONTAINING,BROAD SPECIFICITY,NADPH-DEPENDENT ALDEHYDE REDUCTASE COMPND 14 AHR,OXIDOREDUCTASE,YJGB,ZINC-BINDING DEHYDROGENASE FAMILY PROTEIN; COMPND 15 EC: 1.1.1.2; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: AHR, AWG90_000500, B9M99_17975, B9T59_09540, C6B13_12130, SOURCE 5 CDC27_23140, D2188_25420, D3P01_20900, D9G11_20970, D9I87_13335, SOURCE 6 DND16_13855, DNQ45_13310, DU321_18055, E0L12_15935, ECONIH1_25310, SOURCE 7 ELV08_20515, EQ830_17095, EXX23_18790, EXX53_16635, FNJ83_00500, SOURCE 8 FV293_01340, MS6198_49940; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 13 ORGANISM_TAXID: 562; SOURCE 14 GENE: YJGB, AHR, A9P13_23120, A9X72_22295, AC789_1C46870, SOURCE 15 AM446_24685, AM464_15880, AUQ13_10955, AWP75_26740, BE963_12920, SOURCE 16 BON76_03580, BON87_21450, BVCMS2454_04261, BVCMSKKP061_04826, SOURCE 17 BVCMSKSP011_04570, BVCMSKSP024_01161, BVCMSKSP045_03147, SOURCE 18 BVCMSKSP067_02166, BVCMSNSP047_01920, CRX46_16815, D9J60_11645, SOURCE 19 DJ503_08680, DS732_03420, DU309_23350, EC3234A_79C00790, SOURCE 20 ERS085365_04790, ERS085374_04180, ERS085416_04717, ERS139211_04850, SOURCE 21 EYY27_20520, FNJ69_20595, NCTC8959_04532, NCTC9050_02355, SOURCE 22 NCTC9077_05531, NCTC9117_05474, PGD_03453, SAMEA3472056_04737, SOURCE 23 WR15_06500, YDC107_2991; SOURCE 24 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 25 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ALCOHOL DEHYDROGENASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR G.T.NGUYEN,Y.-G.KIM,J.-W.AHN,J.H.CHANG REVDAT 3 29-NOV-23 7BU3 1 REMARK REVDAT 2 16-DEC-20 7BU3 1 JRNL REVDAT 1 13-MAY-20 7BU3 0 JRNL AUTH G.T.NGUYEN,Y.G.KIM,J.W.AHN,J.H.CHANG JRNL TITL STRUCTURAL BASIS FOR BROAD SUBSTRATE SELECTIVITY OF ALCOHOL JRNL TITL 2 DEHYDROGENASE YJGB FROM ESCHERICHIA COLI . JRNL REF MOLECULES V. 25 2020 JRNL REFN ESSN 1420-3049 JRNL PMID 32455802 JRNL DOI 10.3390/MOLECULES25102404 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.18_3845: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.55 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 99594 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.840 REMARK 3 FREE R VALUE TEST SET COUNT : 3829 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.5500 - 5.9800 1.00 3550 141 0.1498 0.1830 REMARK 3 2 5.9800 - 4.7600 1.00 3540 139 0.1512 0.1858 REMARK 3 3 4.7600 - 4.1600 1.00 3590 144 0.1200 0.1361 REMARK 3 4 4.1600 - 3.7800 1.00 3524 142 0.1335 0.1500 REMARK 3 5 3.7800 - 3.5100 1.00 3544 144 0.1421 0.1830 REMARK 3 6 3.5100 - 3.3000 1.00 3548 138 0.1445 0.1757 REMARK 3 7 3.3000 - 3.1400 1.00 3546 140 0.1529 0.1984 REMARK 3 8 3.1400 - 3.0000 1.00 3558 140 0.1563 0.1623 REMARK 3 9 3.0000 - 2.8800 1.00 3549 141 0.1627 0.2338 REMARK 3 10 2.8800 - 2.7800 1.00 3540 145 0.1639 0.2233 REMARK 3 11 2.7800 - 2.7000 1.00 3570 137 0.1718 0.1984 REMARK 3 12 2.7000 - 2.6200 1.00 3519 142 0.1657 0.2541 REMARK 3 13 2.6200 - 2.5500 1.00 3542 141 0.1786 0.2267 REMARK 3 14 2.5500 - 2.4900 1.00 3538 140 0.1756 0.1922 REMARK 3 15 2.4900 - 2.4300 1.00 3575 143 0.1777 0.2225 REMARK 3 16 2.4300 - 2.3800 1.00 3555 143 0.1738 0.2462 REMARK 3 17 2.3800 - 2.3300 1.00 3538 145 0.1792 0.2550 REMARK 3 18 2.3300 - 2.2900 1.00 3534 141 0.1747 0.2207 REMARK 3 19 2.2900 - 2.2500 1.00 3521 144 0.1879 0.2173 REMARK 3 20 2.2500 - 2.2100 1.00 3563 146 0.1853 0.2087 REMARK 3 21 2.2100 - 2.1700 1.00 3491 142 0.1819 0.1974 REMARK 3 22 2.1700 - 2.1400 1.00 3586 144 0.1814 0.2551 REMARK 3 23 2.1400 - 2.1100 1.00 3548 142 0.1956 0.2828 REMARK 3 24 2.1100 - 2.0800 1.00 3523 142 0.2034 0.2795 REMARK 3 25 2.0800 - 2.0500 1.00 3577 141 0.2077 0.2831 REMARK 3 26 2.0500 - 2.0300 1.00 3515 139 0.2057 0.2763 REMARK 3 27 2.0300 - 2.0000 1.00 3581 143 0.2282 0.3057 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.850 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 5324 REMARK 3 ANGLE : 0.903 7235 REMARK 3 CHIRALITY : 0.056 808 REMARK 3 PLANARITY : 0.005 926 REMARK 3 DIHEDRAL : 16.005 772 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7BU3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-APR-20. REMARK 100 THE DEPOSITION ID IS D_1300016477. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-DEC-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 5C (4A) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 134685 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.450 REMARK 200 RESOLUTION RANGE LOW (A) : 29.550 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.60 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.0700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.49 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 7BU2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS-HCL, PH 7.0, 16% (W/V) PEG REMARK 280 3350 , 0.2 M LITHIUM SULFATE, 5 MM NADPH, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 84.25500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 84.25500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 32.48500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 69.49500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 32.48500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 69.49500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 84.25500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 32.48500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 69.49500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 84.25500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 32.48500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 69.49500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 61 -159.92 -88.65 REMARK 500 HIS A 63 28.00 -158.76 REMARK 500 ASN A 106 50.57 -113.98 REMARK 500 ARG A 121 115.69 83.82 REMARK 500 CYS A 152 -63.58 -131.42 REMARK 500 THR A 287 -107.74 21.58 REMARK 500 LYS A 316 32.24 -98.85 REMARK 500 ALA B 61 -157.48 -87.45 REMARK 500 HIS B 63 31.59 -156.33 REMARK 500 ARG B 121 118.99 81.42 REMARK 500 CYS B 152 -58.23 -137.03 REMARK 500 ILE B 177 70.85 -100.41 REMARK 500 THR B 287 -106.62 20.54 REMARK 500 LYS B 316 34.68 -99.87 REMARK 500 ASP B 338 -105.92 -83.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 ASP A 401 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 405 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 41 SG REMARK 620 2 HIS A 63 NE2 108.8 REMARK 620 3 GLU A 64 OE2 95.0 110.5 REMARK 620 4 CYS A 152 SG 137.5 101.8 101.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 406 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 96 SG REMARK 620 2 CYS A 99 SG 105.1 REMARK 620 3 CYS A 102 SG 120.9 105.5 REMARK 620 4 CYS A 110 SG 105.3 118.8 102.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 404 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 41 SG REMARK 620 2 HIS B 63 NE2 107.0 REMARK 620 3 CYS B 152 SG 138.6 106.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 405 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 96 SG REMARK 620 2 CYS B 99 SG 106.6 REMARK 620 3 CYS B 102 SG 120.9 105.7 REMARK 620 4 CYS B 110 SG 104.9 117.8 101.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ASP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAP A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAP B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 405 DBREF1 7BU3 A 2 337 UNP A0A094VUC2_ECOLX DBREF2 7BU3 A A0A094VUC2 2 337 DBREF1 7BU3 B 3 339 UNP A0A024L8S1_ECOLX DBREF2 7BU3 B A0A024L8S1 3 339 SEQRES 1 A 336 SER MET ILE LYS SER TYR ALA ALA LYS GLU ALA GLY GLY SEQRES 2 A 336 GLU LEU GLU VAL TYR GLU TYR ASP PRO GLY GLU LEU ARG SEQRES 3 A 336 PRO GLN ASP VAL GLU VAL GLN VAL ASP TYR CYS GLY ILE SEQRES 4 A 336 CYS HIS SER ASP LEU SER MET ILE ASP ASN GLU TRP GLY SEQRES 5 A 336 PHE SER GLN TYR PRO LEU VAL ALA GLY HIS GLU VAL ILE SEQRES 6 A 336 GLY ARG VAL VAL ALA LEU GLY SER ALA ALA GLN ASP LYS SEQRES 7 A 336 GLY LEU GLN VAL GLY GLN ARG VAL GLY ILE GLY TRP THR SEQRES 8 A 336 ALA ARG SER CYS GLY HIS CYS ASP ALA CYS ILE SER GLY SEQRES 9 A 336 ASN GLN ILE ASN CYS GLU GLN GLY ALA VAL PRO THR ILE SEQRES 10 A 336 MET ASN ARG GLY GLY PHE ALA GLU LYS LEU ARG ALA ASP SEQRES 11 A 336 TRP GLN TRP VAL ILE PRO LEU PRO GLU ASN ILE ASP ILE SEQRES 12 A 336 GLU SER ALA GLY PRO LEU LEU CYS GLY GLY ILE THR VAL SEQRES 13 A 336 PHE LYS PRO LEU LEU MET HIS HIS ILE THR ALA THR SER SEQRES 14 A 336 ARG VAL GLY VAL ILE GLY ILE GLY GLY LEU GLY HIS ILE SEQRES 15 A 336 ALA ILE LYS LEU LEU HIS ALA MET GLY CYS GLU VAL THR SEQRES 16 A 336 ALA PHE SER SER ASN PRO ALA LYS GLU GLN GLU VAL LEU SEQRES 17 A 336 ALA MET GLY ALA ASP LYS VAL VAL ASN SER ARG ASP PRO SEQRES 18 A 336 GLN ALA LEU LYS ALA LEU ALA GLY GLN PHE ASP LEU ILE SEQRES 19 A 336 ILE ASN THR VAL ASN VAL SER LEU ASP TRP GLN PRO TYR SEQRES 20 A 336 PHE GLU ALA LEU THR TYR GLY GLY ASN PHE HIS THR VAL SEQRES 21 A 336 GLY ALA VAL LEU THR PRO LEU SER VAL PRO ALA PHE THR SEQRES 22 A 336 LEU ILE ALA GLY ASP ARG SER VAL SER GLY SER ALA THR SEQRES 23 A 336 GLY THR PRO TYR GLU LEU ARG LYS LEU MET ARG PHE ALA SEQRES 24 A 336 ALA ARG SER LYS VAL ALA PRO THR THR GLU LEU PHE PRO SEQRES 25 A 336 MET SER LYS ILE ASN ASP ALA ILE GLN HIS VAL ARG ASP SEQRES 26 A 336 GLY LYS ALA ARG TYR ARG VAL VAL LEU LYS ALA SEQRES 1 B 337 MET ILE LYS SER TYR ALA ALA LYS GLU ALA GLY GLY GLU SEQRES 2 B 337 LEU GLU VAL TYR GLU TYR ASP PRO GLY GLU LEU ARG PRO SEQRES 3 B 337 GLN ASP VAL GLU VAL GLN VAL ASP TYR CYS GLY ILE CYS SEQRES 4 B 337 HIS SER ASP LEU SER MET ILE ASP ASN GLU TRP GLY PHE SEQRES 5 B 337 SER GLN TYR PRO LEU VAL ALA GLY HIS GLU VAL ILE GLY SEQRES 6 B 337 ARG VAL VAL ALA LEU GLY SER ALA ALA GLN ASP LYS GLY SEQRES 7 B 337 LEU GLN VAL GLY GLN ARG VAL GLY ILE GLY TRP THR ALA SEQRES 8 B 337 ARG SER CYS GLY HIS CYS ASP ALA CYS ILE SER GLY ASN SEQRES 9 B 337 GLN ILE ASN CYS GLU GLN GLY ALA VAL PRO THR ILE MET SEQRES 10 B 337 ASN ARG GLY GLY PHE ALA GLU LYS LEU ARG ALA ASP TRP SEQRES 11 B 337 GLN TRP VAL ILE PRO LEU PRO GLU ASN ILE ASP ILE GLU SEQRES 12 B 337 SER ALA GLY PRO LEU LEU CYS GLY GLY ILE THR VAL PHE SEQRES 13 B 337 LYS PRO LEU LEU MET HIS HIS ILE THR ALA THR SER ARG SEQRES 14 B 337 VAL GLY VAL ILE GLY ILE GLY GLY LEU GLY HIS ILE ALA SEQRES 15 B 337 ILE LYS LEU LEU HIS ALA MET GLY CYS GLU VAL THR ALA SEQRES 16 B 337 PHE SER SER ASN PRO ALA LYS GLU GLN GLU VAL LEU ALA SEQRES 17 B 337 MET GLY ALA ASP LYS VAL VAL ASN SER ARG ASP PRO GLN SEQRES 18 B 337 ALA LEU LYS ALA LEU ALA GLY GLN PHE ASP LEU ILE ILE SEQRES 19 B 337 ASN THR VAL ASN VAL SER LEU ASP TRP GLN PRO TYR PHE SEQRES 20 B 337 GLU ALA LEU THR TYR GLY GLY ASN PHE HIS THR VAL GLY SEQRES 21 B 337 ALA VAL LEU THR PRO LEU SER VAL PRO ALA PHE THR LEU SEQRES 22 B 337 ILE ALA GLY ASP ARG SER VAL SER GLY SER ALA THR GLY SEQRES 23 B 337 THR PRO TYR GLU LEU ARG LYS LEU MET ARG PHE ALA ALA SEQRES 24 B 337 ARG SER LYS VAL ALA PRO THR THR GLU LEU PHE PRO MET SEQRES 25 B 337 SER LYS ILE ASN ASP ALA ILE GLN HIS VAL ARG ASP GLY SEQRES 26 B 337 LYS ALA ARG TYR ARG VAL VAL LEU LYS ALA ASP TYR HET ASP A 401 8 HET NAP A 402 48 HET GOL A 403 6 HET PEG A 404 7 HET ZN A 405 1 HET ZN A 406 1 HET NAP B 401 48 HET PEG B 402 7 HET GOL B 403 6 HET ZN B 404 1 HET ZN B 405 1 HETNAM ASP ASPARTIC ACID HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETNAM GOL GLYCEROL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM ZN ZINC ION HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 ASP C4 H7 N O4 FORMUL 4 NAP 2(C21 H28 N7 O17 P3) FORMUL 5 GOL 2(C3 H8 O3) FORMUL 6 PEG 2(C4 H10 O3) FORMUL 7 ZN 4(ZN 2+) FORMUL 14 HOH *591(H2 O) HELIX 1 AA1 CYS A 41 ASP A 49 1 9 HELIX 2 AA2 CYS A 99 SER A 104 1 6 HELIX 3 AA3 ASN A 106 CYS A 110 5 5 HELIX 4 AA4 ILE A 118 ARG A 121 5 4 HELIX 5 AA5 ASP A 143 GLY A 148 1 6 HELIX 6 AA6 PRO A 149 LEU A 151 5 3 HELIX 7 AA7 CYS A 152 HIS A 164 1 13 HELIX 8 AA8 GLY A 178 MET A 191 1 14 HELIX 9 AA9 ASN A 201 ALA A 203 5 3 HELIX 10 AB1 LYS A 204 GLY A 212 1 9 HELIX 11 AB2 ASP A 221 ALA A 227 1 7 HELIX 12 AB3 TRP A 245 ALA A 251 1 7 HELIX 13 AB4 PRO A 271 ALA A 277 1 7 HELIX 14 AB5 THR A 289 LYS A 304 1 16 HELIX 15 AB6 LYS A 316 ASP A 326 1 11 HELIX 16 AB7 CYS B 41 ASP B 49 1 9 HELIX 17 AB8 CYS B 99 SER B 104 1 6 HELIX 18 AB9 ASN B 106 CYS B 110 5 5 HELIX 19 AC1 ASP B 143 GLY B 148 1 6 HELIX 20 AC2 PRO B 149 LEU B 151 5 3 HELIX 21 AC3 CYS B 152 HIS B 164 1 13 HELIX 22 AC4 GLY B 178 MET B 191 1 14 HELIX 23 AC5 ASN B 201 ALA B 203 5 3 HELIX 24 AC6 LYS B 204 GLY B 212 1 9 HELIX 25 AC7 ASP B 221 ALA B 227 1 7 HELIX 26 AC8 TRP B 245 ALA B 251 1 7 HELIX 27 AC9 PRO B 271 ALA B 277 1 7 HELIX 28 AD1 THR B 289 LYS B 304 1 16 HELIX 29 AD2 LYS B 316 ASP B 326 1 11 SHEET 1 AA1 2 ILE A 4 ALA A 9 0 SHEET 2 AA1 2 LEU A 16 TYR A 21 -1 O GLU A 17 N ALA A 8 SHEET 1 AA2 5 LYS A 127 ASP A 131 0 SHEET 2 AA2 5 ASP A 30 ILE A 40 -1 N VAL A 33 O LEU A 128 SHEET 3 AA2 5 VAL A 65 LEU A 72 -1 O ARG A 68 N GLN A 34 SHEET 4 AA2 5 ARG A 86 ILE A 89 -1 O VAL A 87 N GLY A 67 SHEET 5 AA2 5 VAL A 135 PRO A 137 -1 O ILE A 136 N GLY A 88 SHEET 1 AA3 4 LYS A 127 ASP A 131 0 SHEET 2 AA3 4 ASP A 30 ILE A 40 -1 N VAL A 33 O LEU A 128 SHEET 3 AA3 4 ARG A 332 LYS A 336 -1 O LEU A 335 N CYS A 38 SHEET 4 AA3 4 THR A 309 PRO A 313 1 N PHE A 312 O LYS A 336 SHEET 1 AA4 2 THR A 92 ARG A 94 0 SHEET 2 AA4 2 VAL A 115 PRO A 116 -1 O VAL A 115 N ALA A 93 SHEET 1 AA5 6 LYS A 215 ASN A 218 0 SHEET 2 AA5 6 GLU A 194 SER A 199 1 N ALA A 197 O VAL A 217 SHEET 3 AA5 6 ARG A 171 ILE A 175 1 N VAL A 174 O PHE A 198 SHEET 4 AA5 6 PHE A 232 ASN A 237 1 O ILE A 236 N ILE A 175 SHEET 5 AA5 6 LEU A 252 THR A 260 1 O HIS A 259 N ILE A 235 SHEET 6 AA5 6 SER A 281 GLY A 284 1 O SER A 283 N THR A 260 SHEET 1 AA6 2 ILE B 4 ALA B 9 0 SHEET 2 AA6 2 LEU B 16 TYR B 21 -1 O GLU B 17 N ALA B 8 SHEET 1 AA7 5 LYS B 127 ASP B 131 0 SHEET 2 AA7 5 ASP B 30 ILE B 40 -1 N VAL B 33 O LEU B 128 SHEET 3 AA7 5 VAL B 65 LEU B 72 -1 O ARG B 68 N GLN B 34 SHEET 4 AA7 5 ARG B 86 ILE B 89 -1 O VAL B 87 N GLY B 67 SHEET 5 AA7 5 VAL B 135 PRO B 137 -1 O ILE B 136 N GLY B 88 SHEET 1 AA8 4 LYS B 127 ASP B 131 0 SHEET 2 AA8 4 ASP B 30 ILE B 40 -1 N VAL B 33 O LEU B 128 SHEET 3 AA8 4 ARG B 332 LYS B 336 -1 O LEU B 335 N CYS B 38 SHEET 4 AA8 4 THR B 309 PRO B 313 1 N PHE B 312 O LYS B 336 SHEET 1 AA9 2 THR B 92 ARG B 94 0 SHEET 2 AA9 2 VAL B 115 PRO B 116 -1 O VAL B 115 N ALA B 93 SHEET 1 AB1 6 LYS B 215 ASN B 218 0 SHEET 2 AB1 6 GLU B 194 SER B 199 1 N ALA B 197 O VAL B 217 SHEET 3 AB1 6 ARG B 171 ILE B 175 1 N VAL B 174 O PHE B 198 SHEET 4 AB1 6 PHE B 232 ASN B 237 1 O ILE B 236 N ILE B 175 SHEET 5 AB1 6 LEU B 252 THR B 260 1 O HIS B 259 N ILE B 235 SHEET 6 AB1 6 SER B 281 GLY B 284 1 O SER B 283 N THR B 260 LINK SG CYS A 41 ZN ZN A 405 1555 1555 2.33 LINK NE2 HIS A 63 ZN ZN A 405 1555 1555 2.26 LINK OE2 GLU A 64 ZN ZN A 405 1555 1555 2.56 LINK SG CYS A 96 ZN ZN A 406 1555 1555 2.34 LINK SG CYS A 99 ZN ZN A 406 1555 1555 2.33 LINK SG CYS A 102 ZN ZN A 406 1555 1555 2.35 LINK SG CYS A 110 ZN ZN A 406 1555 1555 2.35 LINK SG CYS A 152 ZN ZN A 405 1555 1555 2.35 LINK SG CYS B 41 ZN ZN B 404 1555 1555 2.32 LINK NE2 HIS B 63 ZN ZN B 404 1555 1555 2.26 LINK SG CYS B 96 ZN ZN B 405 1555 1555 2.32 LINK SG CYS B 99 ZN ZN B 405 1555 1555 2.32 LINK SG CYS B 102 ZN ZN B 405 1555 1555 2.36 LINK SG CYS B 110 ZN ZN B 405 1555 1555 2.33 LINK SG CYS B 152 ZN ZN B 404 1555 1555 2.32 CISPEP 1 TYR A 57 PRO A 58 0 -0.18 CISPEP 2 ARG A 330 TYR A 331 0 0.73 CISPEP 3 TYR B 57 PRO B 58 0 -0.73 CISPEP 4 ARG B 330 TYR B 331 0 5.76 SITE 1 AC1 6 MET A 314 SER A 315 LYS A 336 ALA A 337 SITE 2 AC1 6 HOH A 502 HOH A 506 SITE 1 AC2 33 HIS A 42 SER A 43 TRP A 52 CYS A 152 SITE 2 AC2 33 THR A 156 GLY A 176 ILE A 177 GLY A 178 SITE 3 AC2 33 GLY A 179 LEU A 180 SER A 199 SER A 200 SITE 4 AC2 33 ASN A 201 LYS A 204 THR A 238 VAL A 239 SITE 5 AC2 33 ASN A 240 VAL A 241 VAL A 261 ALA A 263 SITE 6 AC2 33 SER A 285 ALA A 286 THR A 287 ARG A 332 SITE 7 AC2 33 PEG A 404 HOH A 534 HOH A 556 HOH A 589 SITE 8 AC2 33 HOH A 609 HOH A 637 HOH A 642 HOH A 672 SITE 9 AC2 33 ARG B 220 SITE 1 AC3 8 SER A 199 SER A 200 ASN A 201 PRO A 202 SITE 2 AC3 8 GLU A 205 ASN A 218 ARG A 220 HOH A 688 SITE 1 AC4 7 TRP A 52 TRP A 91 PHE A 273 NAP A 402 SITE 2 AC4 7 HOH A 516 HOH A 548 HOH A 562 SITE 1 AC5 4 CYS A 41 HIS A 63 GLU A 64 CYS A 152 SITE 1 AC6 4 CYS A 96 CYS A 99 CYS A 102 CYS A 110 SITE 1 AC7 33 ARG A 220 HIS B 42 SER B 43 TRP B 52 SITE 2 AC7 33 CYS B 152 THR B 156 GLY B 176 ILE B 177 SITE 3 AC7 33 GLY B 178 GLY B 179 LEU B 180 SER B 199 SITE 4 AC7 33 SER B 200 LYS B 204 ARG B 220 THR B 238 SITE 5 AC7 33 VAL B 239 ASN B 240 VAL B 241 VAL B 261 SITE 6 AC7 33 GLY B 262 ALA B 263 SER B 285 ALA B 286 SITE 7 AC7 33 THR B 287 ARG B 332 PEG B 402 HOH B 535 SITE 8 AC7 33 HOH B 576 HOH B 580 HOH B 604 HOH B 628 SITE 9 AC7 33 HOH B 654 SITE 1 AC8 7 TRP B 52 TRP B 91 PHE B 273 ILE B 276 SITE 2 AC8 7 NAP B 401 HOH B 556 HOH B 603 SITE 1 AC9 7 SER B 199 SER B 200 ASN B 201 PRO B 202 SITE 2 AC9 7 GLU B 205 VAL B 216 ASN B 218 SITE 1 AD1 4 CYS B 41 HIS B 63 GLU B 64 CYS B 152 SITE 1 AD2 5 CYS B 96 GLY B 97 CYS B 99 CYS B 102 SITE 2 AD2 5 CYS B 110 CRYST1 64.970 138.990 168.510 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015392 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007195 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005934 0.00000