HEADER UNKNOWN FUNCTION 21-APR-20 7BY1 TITLE CRYSTAL STRUCTURE OF GCN5 PCAF N-TERMINAL DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE ACETYLTRANSFERASE KAT2A; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GENERAL CONTROL OF AMINO ACID SYNTHESIS PROTEIN 5-LIKE 2, COMPND 5 HISTONE ACETYLTRANSFERASE GCN5,MMGCN5,HISTONE GLUTARYLTRANSFERASE COMPND 6 KAT2A,HISTONE SUCCINYLTRANSFERASE KAT2A,LYSINE ACETYLTRANSFERASE 2A; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: KAT2A, GCN5L2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS UBIQUITIN LIGASE, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR R.HIBI,S.TOMA-FUKAI,T.SHIMIZU REVDAT 4 27-MAR-24 7BY1 1 REMARK REVDAT 3 11-NOV-20 7BY1 1 JRNL REVDAT 2 02-SEP-20 7BY1 1 JRNL REVDAT 1 26-AUG-20 7BY1 0 JRNL AUTH S.TOMA-FUKAI,R.HIBI,T.NAGANUMA,M.SAKAI,S.SAIJO,N.SHIMIZU, JRNL AUTH 2 M.MATSUMOTO,T.SHIMIZU JRNL TITL CRYSTAL STRUCTURE OF GCN5 PCAF N-TERMINAL DOMAIN REVEALS JRNL TITL 2 ATYPICAL UBIQUITIN LIGASE STRUCTURE. JRNL REF J.BIOL.CHEM. V. 295 14630 2020 JRNL REFN ESSN 1083-351X JRNL PMID 32820047 JRNL DOI 10.1074/JBC.RA120.013431 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 63910 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 3322 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4688 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2940 REMARK 3 BIN FREE R VALUE SET COUNT : 254 REMARK 3 BIN FREE R VALUE : 0.3160 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4658 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 415 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : -0.01000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.122 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.119 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.087 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.838 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4772 ; 0.018 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4614 ; 0.007 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6440 ; 1.777 ; 1.963 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10640 ; 1.320 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 568 ; 5.810 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 220 ;30.771 ;23.182 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 870 ;14.417 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 38 ;18.126 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 702 ; 0.115 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5256 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1126 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2284 ; 2.854 ; 2.607 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2283 ; 2.853 ; 2.606 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2848 ; 3.897 ; 3.884 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2849 ; 3.896 ; 3.885 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2488 ; 4.329 ; 3.106 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2489 ; 4.328 ; 3.106 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3593 ; 6.543 ; 4.448 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5674 ; 8.315 ;21.628 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5529 ; 8.202 ;21.273 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 83 375 B 83 375 35240 0.06 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 7BY1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-APR-20. REMARK 100 THE DEPOSITION ID IS D_1300016690. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JUN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-1A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 67271 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 45.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM IMIDAZOLE/MES (PH 6.5), 20% REMARK 280 PEGMME500, 10% PEG20,000 , 20 MM SODIUM FORMATE , 20 MM AMMONIUM REMARK 280 ACETATE, 20 MM SODIUM CITRATE TRIBASIC DEHYDRATE, 20 MM SODIUM REMARK 280 POTASSIUM TARTRATE TETRAHYDRATE, 20 MM SODIUM OXAMATE, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 74.42850 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 62 REMARK 465 PRO A 63 REMARK 465 LEU A 64 REMARK 465 GLY A 65 REMARK 465 SER A 66 REMARK 465 SER A 67 REMARK 465 GLY A 68 REMARK 465 GLY A 69 REMARK 465 ASP A 70 REMARK 465 PRO A 71 REMARK 465 ALA A 72 REMARK 465 ARG A 73 REMARK 465 PRO A 74 REMARK 465 GLY A 75 REMARK 465 LEU A 76 REMARK 465 SER A 77 REMARK 465 GLN A 78 REMARK 465 GLN A 79 REMARK 465 GLN A 80 REMARK 465 ARG A 81 REMARK 465 ALA A 82 REMARK 465 THR A 125 REMARK 465 ALA A 126 REMARK 465 PRO A 127 REMARK 465 ARG A 128 REMARK 465 MET A 129 REMARK 465 ASP A 130 REMARK 465 LEU A 131 REMARK 465 GLN A 132 REMARK 465 GLN A 133 REMARK 465 GLY B 62 REMARK 465 PRO B 63 REMARK 465 LEU B 64 REMARK 465 GLY B 65 REMARK 465 SER B 66 REMARK 465 SER B 67 REMARK 465 GLY B 68 REMARK 465 GLY B 69 REMARK 465 ASP B 70 REMARK 465 PRO B 71 REMARK 465 ALA B 72 REMARK 465 ARG B 73 REMARK 465 PRO B 74 REMARK 465 GLY B 75 REMARK 465 LEU B 76 REMARK 465 SER B 77 REMARK 465 GLN B 78 REMARK 465 GLN B 79 REMARK 465 GLN B 80 REMARK 465 ARG B 81 REMARK 465 ALA B 82 REMARK 465 THR B 125 REMARK 465 ALA B 126 REMARK 465 PRO B 127 REMARK 465 ARG B 128 REMARK 465 MET B 129 REMARK 465 ASP B 130 REMARK 465 LEU B 131 REMARK 465 GLN B 132 REMARK 465 GLN B 133 REMARK 465 PRO B 377 REMARK 465 PRO B 378 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 83 OG REMARK 470 GLU A 111 CG CD OE1 OE2 REMARK 470 GLU A 185 CG CD OE1 OE2 REMARK 470 GLU A 342 CG CD OE1 OE2 REMARK 470 SER B 83 OG REMARK 470 GLU B 111 CG CD OE1 OE2 REMARK 470 GLU B 185 CG CD OE1 OE2 REMARK 470 GLU B 342 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 272 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 ARG A 326 NE - CZ - NH2 ANGL. DEV. = -4.7 DEGREES REMARK 500 ARG A 344 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ARG B 85 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG B 272 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG B 326 NE - CZ - NH2 ANGL. DEV. = -5.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 294 -56.94 -120.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 711 DISTANCE = 5.99 ANGSTROMS REMARK 525 HOH B 704 DISTANCE = 5.87 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 107 SG REMARK 620 2 CYS A 113 SG 116.7 REMARK 620 3 CYS A 145 SG 113.1 108.4 REMARK 620 4 HIS A 147 ND1 111.3 106.9 98.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 115 SG REMARK 620 2 CYS A 142 SG 112.2 REMARK 620 3 CYS A 145 SG 117.1 107.0 REMARK 620 4 HIS A 152 NE2 115.1 108.5 95.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 107 SG REMARK 620 2 CYS B 113 SG 117.8 REMARK 620 3 CYS B 145 SG 111.6 108.9 REMARK 620 4 HIS B 147 ND1 111.2 107.6 97.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 115 SG REMARK 620 2 CYS B 142 SG 111.1 REMARK 620 3 CYS B 145 SG 118.1 107.4 REMARK 620 4 HIS B 152 NE2 117.1 105.5 96.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 402 DBREF 7BY1 A 67 378 UNP Q9JHD2 KAT2A_MOUSE 67 378 DBREF 7BY1 B 67 378 UNP Q9JHD2 KAT2A_MOUSE 67 378 SEQADV 7BY1 GLY A 62 UNP Q9JHD2 EXPRESSION TAG SEQADV 7BY1 PRO A 63 UNP Q9JHD2 EXPRESSION TAG SEQADV 7BY1 LEU A 64 UNP Q9JHD2 EXPRESSION TAG SEQADV 7BY1 GLY A 65 UNP Q9JHD2 EXPRESSION TAG SEQADV 7BY1 SER A 66 UNP Q9JHD2 EXPRESSION TAG SEQADV 7BY1 GLY B 62 UNP Q9JHD2 EXPRESSION TAG SEQADV 7BY1 PRO B 63 UNP Q9JHD2 EXPRESSION TAG SEQADV 7BY1 LEU B 64 UNP Q9JHD2 EXPRESSION TAG SEQADV 7BY1 GLY B 65 UNP Q9JHD2 EXPRESSION TAG SEQADV 7BY1 SER B 66 UNP Q9JHD2 EXPRESSION TAG SEQRES 1 A 317 GLY PRO LEU GLY SER SER GLY GLY ASP PRO ALA ARG PRO SEQRES 2 A 317 GLY LEU SER GLN GLN GLN ARG ALA SER GLN ARG LYS ALA SEQRES 3 A 317 GLN VAL ARG GLY LEU PRO ARG ALA LYS LYS LEU GLU LYS SEQRES 4 A 317 LEU GLY VAL PHE SER ALA CYS LYS ALA ASN GLU THR CYS SEQRES 5 A 317 LYS CYS ASN GLY TRP LYS ASN PRO LYS PRO PRO THR ALA SEQRES 6 A 317 PRO ARG MET ASP LEU GLN GLN PRO ALA ALA ASN LEU SER SEQRES 7 A 317 GLU LEU CYS ARG SER CYS GLU HIS PRO LEU ALA ASP HIS SEQRES 8 A 317 VAL SER HIS LEU GLU ASN VAL SER GLU ASP GLU ILE ASN SEQRES 9 A 317 ARG LEU LEU GLY MET VAL VAL ASP VAL GLU ASN LEU PHE SEQRES 10 A 317 MET SER VAL HIS LYS GLU GLU ASP THR ASP THR LYS GLN SEQRES 11 A 317 VAL TYR PHE TYR LEU PHE LYS LEU LEU ARG LYS CYS ILE SEQRES 12 A 317 LEU GLN MET THR ARG PRO VAL VAL GLU GLY SER LEU GLY SEQRES 13 A 317 SER PRO PRO PHE GLU LYS PRO ASN ILE GLU GLN GLY VAL SEQRES 14 A 317 LEU ASN PHE VAL GLN TYR LYS PHE SER HIS LEU ALA PRO SEQRES 15 A 317 ARG GLU ARG GLN THR MET PHE GLU LEU SER LYS MET PHE SEQRES 16 A 317 LEU LEU CYS LEU ASN TYR TRP LYS LEU GLU THR PRO ALA SEQRES 17 A 317 GLN PHE ARG GLN ARG SER GLN SER GLU ASP VAL ALA THR SEQRES 18 A 317 TYR LYS VAL ASN TYR THR ARG TRP LEU CYS TYR CYS HIS SEQRES 19 A 317 VAL PRO GLN SER CYS ASP SER LEU PRO ARG TYR GLU THR SEQRES 20 A 317 THR HIS VAL PHE GLY ARG SER LEU LEU ARG SER ILE PHE SEQRES 21 A 317 THR VAL THR ARG ARG GLN LEU LEU GLU LYS PHE ARG VAL SEQRES 22 A 317 GLU LYS ASP LYS LEU VAL PRO GLU LYS ARG THR LEU ILE SEQRES 23 A 317 LEU THR HIS PHE PRO LYS PHE LEU SER MET LEU GLU GLU SEQRES 24 A 317 GLU ILE TYR GLY ALA ASN SER PRO ILE TRP GLU SER GLY SEQRES 25 A 317 PHE THR MET PRO PRO SEQRES 1 B 317 GLY PRO LEU GLY SER SER GLY GLY ASP PRO ALA ARG PRO SEQRES 2 B 317 GLY LEU SER GLN GLN GLN ARG ALA SER GLN ARG LYS ALA SEQRES 3 B 317 GLN VAL ARG GLY LEU PRO ARG ALA LYS LYS LEU GLU LYS SEQRES 4 B 317 LEU GLY VAL PHE SER ALA CYS LYS ALA ASN GLU THR CYS SEQRES 5 B 317 LYS CYS ASN GLY TRP LYS ASN PRO LYS PRO PRO THR ALA SEQRES 6 B 317 PRO ARG MET ASP LEU GLN GLN PRO ALA ALA ASN LEU SER SEQRES 7 B 317 GLU LEU CYS ARG SER CYS GLU HIS PRO LEU ALA ASP HIS SEQRES 8 B 317 VAL SER HIS LEU GLU ASN VAL SER GLU ASP GLU ILE ASN SEQRES 9 B 317 ARG LEU LEU GLY MET VAL VAL ASP VAL GLU ASN LEU PHE SEQRES 10 B 317 MET SER VAL HIS LYS GLU GLU ASP THR ASP THR LYS GLN SEQRES 11 B 317 VAL TYR PHE TYR LEU PHE LYS LEU LEU ARG LYS CYS ILE SEQRES 12 B 317 LEU GLN MET THR ARG PRO VAL VAL GLU GLY SER LEU GLY SEQRES 13 B 317 SER PRO PRO PHE GLU LYS PRO ASN ILE GLU GLN GLY VAL SEQRES 14 B 317 LEU ASN PHE VAL GLN TYR LYS PHE SER HIS LEU ALA PRO SEQRES 15 B 317 ARG GLU ARG GLN THR MET PHE GLU LEU SER LYS MET PHE SEQRES 16 B 317 LEU LEU CYS LEU ASN TYR TRP LYS LEU GLU THR PRO ALA SEQRES 17 B 317 GLN PHE ARG GLN ARG SER GLN SER GLU ASP VAL ALA THR SEQRES 18 B 317 TYR LYS VAL ASN TYR THR ARG TRP LEU CYS TYR CYS HIS SEQRES 19 B 317 VAL PRO GLN SER CYS ASP SER LEU PRO ARG TYR GLU THR SEQRES 20 B 317 THR HIS VAL PHE GLY ARG SER LEU LEU ARG SER ILE PHE SEQRES 21 B 317 THR VAL THR ARG ARG GLN LEU LEU GLU LYS PHE ARG VAL SEQRES 22 B 317 GLU LYS ASP LYS LEU VAL PRO GLU LYS ARG THR LEU ILE SEQRES 23 B 317 LEU THR HIS PHE PRO LYS PHE LEU SER MET LEU GLU GLU SEQRES 24 B 317 GLU ILE TYR GLY ALA ASN SER PRO ILE TRP GLU SER GLY SEQRES 25 B 317 PHE THR MET PRO PRO HET ZN A 401 1 HET ZN A 402 1 HET ZN B 401 1 HET ZN B 402 1 HETNAM ZN ZINC ION FORMUL 3 ZN 4(ZN 2+) FORMUL 7 HOH *415(H2 O) HELIX 1 AA1 SER A 83 GLY A 91 1 9 HELIX 2 AA2 PRO A 93 VAL A 103 1 11 HELIX 3 AA3 LEU A 149 SER A 154 1 6 HELIX 4 AA4 HIS A 155 GLU A 157 5 3 HELIX 5 AA5 SER A 160 GLU A 184 1 25 HELIX 6 AA6 ASP A 186 MET A 207 1 22 HELIX 7 AA7 ASN A 225 SER A 239 1 15 HELIX 8 AA8 ALA A 242 TRP A 263 1 22 HELIX 9 AA9 THR A 267 SER A 275 1 9 HELIX 10 AB1 GLN A 276 CYS A 294 1 19 HELIX 11 AB2 CYS A 294 CYS A 300 1 7 HELIX 12 AB3 GLU A 307 PHE A 312 1 6 HELIX 13 AB4 GLY A 313 LYS A 336 1 24 HELIX 14 AB5 ASP A 337 LEU A 339 5 3 HELIX 15 AB6 VAL A 340 GLY A 364 1 25 HELIX 16 AB7 SER A 367 GLU A 371 5 5 HELIX 17 AB8 GLN B 84 GLY B 91 1 8 HELIX 18 AB9 PRO B 93 VAL B 103 1 11 HELIX 19 AC1 LEU B 149 SER B 154 1 6 HELIX 20 AC2 HIS B 155 GLU B 157 5 3 HELIX 21 AC3 SER B 160 GLU B 184 1 25 HELIX 22 AC4 ASP B 186 MET B 207 1 22 HELIX 23 AC5 ASN B 225 SER B 239 1 15 HELIX 24 AC6 ALA B 242 TRP B 263 1 22 HELIX 25 AC7 THR B 267 ARG B 274 1 8 HELIX 26 AC8 GLN B 276 CYS B 294 1 19 HELIX 27 AC9 CYS B 294 CYS B 300 1 7 HELIX 28 AD1 GLU B 307 PHE B 312 1 6 HELIX 29 AD2 GLY B 313 LYS B 336 1 24 HELIX 30 AD3 ASP B 337 LEU B 339 5 3 HELIX 31 AD4 VAL B 340 GLY B 364 1 25 HELIX 32 AD5 SER B 367 GLU B 371 5 5 LINK SG CYS A 107 ZN ZN A 401 1555 1555 2.27 LINK SG CYS A 113 ZN ZN A 401 1555 1555 2.24 LINK SG CYS A 115 ZN ZN A 402 1555 1555 2.23 LINK SG CYS A 142 ZN ZN A 402 1555 1555 2.29 LINK SG CYS A 145 ZN ZN A 401 1555 1555 2.37 LINK SG CYS A 145 ZN ZN A 402 1555 1555 2.46 LINK ND1 HIS A 147 ZN ZN A 401 1555 1555 2.24 LINK NE2 HIS A 152 ZN ZN A 402 1555 1555 2.19 LINK SG CYS B 107 ZN ZN B 402 1555 1555 2.30 LINK SG CYS B 113 ZN ZN B 402 1555 1555 2.21 LINK SG CYS B 115 ZN ZN B 401 1555 1555 2.25 LINK SG CYS B 142 ZN ZN B 401 1555 1555 2.32 LINK SG CYS B 145 ZN ZN B 401 1555 1555 2.46 LINK SG CYS B 145 ZN ZN B 402 1555 1555 2.37 LINK ND1 HIS B 147 ZN ZN B 402 1555 1555 2.27 LINK NE2 HIS B 152 ZN ZN B 401 1555 1555 2.18 CISPEP 1 PRO A 219 PRO A 220 0 3.06 CISPEP 2 LYS A 223 PRO A 224 0 -7.52 CISPEP 3 PRO B 219 PRO B 220 0 6.54 CISPEP 4 LYS B 223 PRO B 224 0 -11.04 SITE 1 AC1 4 CYS A 107 CYS A 113 CYS A 145 HIS A 147 SITE 1 AC2 4 CYS A 115 CYS A 142 CYS A 145 HIS A 152 SITE 1 AC3 4 CYS B 115 CYS B 142 CYS B 145 HIS B 152 SITE 1 AC4 4 CYS B 107 CYS B 113 CYS B 145 HIS B 147 CRYST1 43.069 148.857 58.998 90.00 101.03 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023219 0.000000 0.004526 0.00000 SCALE2 0.000000 0.006718 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017269 0.00000