HEADER OXIDOREDUCTASE 18-MAY-20 7C4N TITLE ANCESTRAL L-AMINO ACID OXIDASE (ANCLAAO-N5) L-PHE BINDING FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANCESTRAL L-AMINO ACID OXIDASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630 KEYWDS L-AMINO ACID OXIDASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR S.NAKANO,Y.MINAMINO,H.KARASUDA,S.ITO REVDAT 3 27-MAR-24 7C4N 1 REMARK REVDAT 2 06-JAN-21 7C4N 1 JRNL REVDAT 1 02-DEC-20 7C4N 0 JRNL AUTH S.NAKANO,K.KOZUKA,Y.MINAMINO,H.KARASUDA,F.HASEBE,S.ITO JRNL TITL ANCESTRAL L-AMINO ACID OXIDASES FOR DERACEMIZATION AND JRNL TITL 2 STEREOINVERSION OF AMINO ACIDS JRNL REF COMMUN CHEM V. 3 2020 JRNL REFN ESSN 2399-3669 JRNL DOI 10.1038/S42004-020-00432-8 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.84 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 43026 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.880 REMARK 3 FREE R VALUE TEST SET COUNT : 2100 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.8400 - 5.4300 1.00 2923 164 0.1740 0.1911 REMARK 3 2 5.4300 - 4.3100 1.00 2777 146 0.1522 0.1839 REMARK 3 3 4.3100 - 3.7600 1.00 2756 155 0.1506 0.1892 REMARK 3 4 3.7600 - 3.4200 1.00 2722 150 0.1704 0.2067 REMARK 3 5 3.4200 - 3.1700 1.00 2758 117 0.1871 0.2347 REMARK 3 6 3.1700 - 2.9900 1.00 2708 145 0.1911 0.2262 REMARK 3 7 2.9900 - 2.8400 1.00 2713 130 0.1901 0.2309 REMARK 3 8 2.8400 - 2.7100 1.00 2723 153 0.1836 0.2302 REMARK 3 9 2.7100 - 2.6100 1.00 2688 121 0.1766 0.2135 REMARK 3 10 2.6100 - 2.5200 1.00 2745 104 0.1747 0.2317 REMARK 3 11 2.5200 - 2.4400 1.00 2702 144 0.1789 0.2165 REMARK 3 12 2.4400 - 2.3700 1.00 2704 130 0.1800 0.2411 REMARK 3 13 2.3700 - 2.3100 1.00 2689 143 0.1846 0.2569 REMARK 3 14 2.3100 - 2.2500 1.00 2686 135 0.1832 0.2308 REMARK 3 15 2.2500 - 2.2000 0.99 2632 163 0.1967 0.2332 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.182 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.970 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.95 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 5089 REMARK 3 ANGLE : 0.882 6917 REMARK 3 CHIRALITY : 0.051 730 REMARK 3 PLANARITY : 0.005 900 REMARK 3 DIHEDRAL : 5.607 2976 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7C4N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-MAY-20. REMARK 100 THE DEPOSITION ID IS D_1300017029. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-DEC-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 3.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43030 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 47.840 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 26.90 REMARK 200 R MERGE (I) : 0.10700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 28.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.32 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.59700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0M NACL, 0.1M CITRIC ACID PH 3.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 65.98550 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 65.98550 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 95.67650 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 65.98550 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 65.98550 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 95.67650 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 65.98550 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 65.98550 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 95.67650 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 65.98550 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 65.98550 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 95.67650 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 65.98550 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 65.98550 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 95.67650 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 65.98550 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 65.98550 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 95.67650 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 65.98550 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 65.98550 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 95.67650 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 65.98550 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 65.98550 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 95.67650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 45850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 GLY A 1 REMARK 465 THR A 2 REMARK 465 HIS A 3 REMARK 465 TYR A 4 REMARK 465 LYS A 5 REMARK 465 LEU A 6 REMARK 465 GLY A 7 REMARK 465 SER A 8 REMARK 465 ASP A 9 REMARK 465 ILE A 10 REMARK 465 SER A 11 REMARK 465 GLN A 12 REMARK 465 LYS A 13 REMARK 465 GLU A 74 REMARK 465 PRO A 75 REMARK 465 PRO A 630 REMARK 465 ASN A 631 REMARK 465 THR A 632 REMARK 465 LYS A 633 REMARK 465 HIS A 634 REMARK 465 LYS A 635 REMARK 465 VAL A 636 REMARK 465 THR A 637 REMARK 465 LEU A 638 REMARK 465 ALA A 639 REMARK 465 GLU A 640 REMARK 465 VAL A 641 REMARK 465 ASN A 642 REMARK 465 SER A 643 REMARK 465 VAL A 644 REMARK 465 LEU A 645 REMARK 465 GLY A 646 REMARK 465 VAL A 647 REMARK 465 ASN A 648 REMARK 465 LEU A 649 REMARK 465 SER A 650 REMARK 465 TYR A 651 REMARK 465 PHE A 652 REMARK 465 ASP A 653 REMARK 465 LYS A 654 REMARK 465 PRO A 655 REMARK 465 GLU A 656 REMARK 465 HIS A 657 REMARK 465 HIS A 658 REMARK 465 HIS A 659 REMARK 465 HIS A 660 REMARK 465 HIS A 661 REMARK 465 HIS A 662 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 180 NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 803 O HOH A 1028 1.72 REMARK 500 OD1 ASP A 371 O HOH A 801 2.08 REMARK 500 O HOH A 1089 O HOH A 1162 2.17 REMARK 500 O HOH A 874 O HOH A 1091 2.17 REMARK 500 O HOH A 1013 O HOH A 1047 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1113 O HOH A 1113 8555 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 382 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 26 33.83 -96.71 REMARK 500 ASP A 60 88.40 -157.61 REMARK 500 MET A 88 -13.86 -140.65 REMARK 500 SER A 179 44.74 -102.67 REMARK 500 ASP A 306 -167.50 -66.26 REMARK 500 GLN A 310 102.53 -54.60 REMARK 500 SER A 386 -71.19 -118.55 REMARK 500 HIS A 419 53.88 -103.05 REMARK 500 TYR A 450 -96.46 8.73 REMARK 500 ILE A 624 -61.01 -108.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FAD A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PHE A 702 DBREF 7C4N A 0 662 PDB 7C4N 7C4N 0 662 SEQRES 1 A 663 MET GLY THR HIS TYR LYS LEU GLY SER ASP ILE SER GLN SEQRES 2 A 663 LYS SER ILE PRO LYS GLU VAL LYS VAL ALA ILE VAL GLY SEQRES 3 A 663 ALA GLY MET SER GLY LEU TYR SER ALA TRP ARG LEU GLN SEQRES 4 A 663 SER GLU ALA ASN VAL GLY ASP LEU ALA ILE PHE GLU ARG SEQRES 5 A 663 SER ASP ARG THR GLY GLY ARG LEU ASP SER ASP LEU ILE SEQRES 6 A 663 GLU PHE LYS ASP ASN ARG ALA GLY ALA GLU PRO GLY SER SEQRES 7 A 663 THR ILE THR VAL LYS GLU GLU GLN GLY GLY MET ARG PHE SEQRES 8 A 663 LEU PHE GLU GLY MET ASP ASP LEU MET ALA LEU PHE LEU SEQRES 9 A 663 LYS LEU GLY LEU GLU ASP GLN ILE VAL PRO PHE PRO MET SEQRES 10 A 663 ASN SER GLY GLY ASN ASN ARG LEU TYR PHE ARG GLY THR SEQRES 11 A 663 SER PHE SER VAL ASN ASP ALA GLU GLN ASP ASP TYR HIS SEQRES 12 A 663 ILE TRP SER ALA LEU TYR ASN LEU ASP PRO SER GLU GLN SEQRES 13 A 663 GLY VAL ASN PRO LYS ASP ILE ILE ASN VAL VAL PHE ASN SEQRES 14 A 663 ARG ILE LEU GLN VAL ASN PRO GLN PHE ASP SER ARG PRO SEQRES 15 A 663 GLU VAL ARG GLY PRO GLU PHE TRP GLN ASN PHE ARG LEU SEQRES 16 A 663 GLN CYS GLN TRP GLN GLY GLU PRO LEU TYR ASN TRP SER SEQRES 17 A 663 LEU TRP ASP LEU LEU THR ASP MET GLY TYR SER GLN GLU SEQRES 18 A 663 CYS ILE THR MET LEU TYR ARG VAL LEU GLY PHE ASN GLY SEQRES 19 A 663 THR PHE LEU SER LYS MET ASN ALA GLY VAL ALA TYR GLN SEQRES 20 A 663 LEU LEU GLU ASP PHE PRO ALA ASP VAL GLU PHE ARG THR SEQRES 21 A 663 PHE LYS ASP GLY PHE SER THR LEU PRO ASN ALA LEU VAL SEQRES 22 A 663 ASP LYS ILE GLY LYS ASP LYS ILE HIS LEU GLN THR SER SEQRES 23 A 663 ILE ASP SER ILE ALA PHE ASP LYS ALA ASP SER LYS TYR SEQRES 24 A 663 VAL LEU LYS TYR THR LYS ILE ASP GLN SER GLY GLN VAL SEQRES 25 A 663 SER GLU GLY LYS PHE LYS ALA GLU LYS VAL ILE LEU GLY SEQRES 26 A 663 LEU PRO ARG LEU ALA LEU GLU LYS LEU PHE ILE ALA SER SEQRES 27 A 663 ASP ALA PHE LYS GLN LEU PRO LYS LYS ARG ARG ASP GLU SEQRES 28 A 663 LEU TRP ASP THR LEU GLN SER THR SER ASN GLN PRO LEU SEQRES 29 A 663 LEU LYS ILE ASN LEU TYR TYR ASP THR ALA TRP TRP GLY SEQRES 30 A 663 THR GLY MET THR GLY ARG PRO ALA VAL SER PHE GLY PRO SEQRES 31 A 663 ASN PHE ALA ASP LEU PRO THR GLY SER VAL TYR PRO PHE SEQRES 32 A 663 TYR ALA LEU ASN ASP GLU LEU ALA ALA ALA LEU MET TYR SEQRES 33 A 663 ASP GLU ARG HIS ALA THR PRO ASN PRO ASP THR GLN HIS SEQRES 34 A 663 LYS LEU ASP GLY ILE ASP ALA ALA LYS TYR ALA ARG PRO SEQRES 35 A 663 ALA ALA LEU THR ILE TYR CYS ASP TYR LEU ASN ILE ASN SEQRES 36 A 663 PHE TRP SER ALA LEU GLN ASN LYS GLY GLU LEU TYR HIS SEQRES 37 A 663 HIS PRO HIS GLU SER GLU LEU VAL GLU SER ILE PRO SER SEQRES 38 A 663 ASP ILE PHE PRO ALA SER GLU ALA VAL VAL GLN GLN ALA SEQRES 39 A 663 THR GLN PHE PHE LYS ASP ILE PHE ASN THR HIS TYR VAL SEQRES 40 A 663 PRO GLN PRO THR LEU THR SER ALA ARG ILE TRP GLU GLY SEQRES 41 A 663 ASN VAL ASN PHE ASN VAL PRO GLU ASN LEU GLN PHE GLY SEQRES 42 A 663 PHE GLY VAL HIS GLN TRP ALA ILE GLY ALA ASN ASP LYS SEQRES 43 A 663 GLU VAL ILE GLU ASP LEU VAL GLU PRO LEU PRO ASN LEU SEQRES 44 A 663 PHE THR CYS GLY GLU ALA TYR SER ASP TYR GLN GLY TRP SEQRES 45 A 663 VAL GLU GLY ALA LEU ARG SER THR ASP LEU VAL LEU GLN SEQRES 46 A 663 LYS GLY PHE GLY LEU ALA PRO LEU SER GLU VAL TYR GLU SEQRES 47 A 663 GLN ASP GLN GLY ARG SER SER SER GLU ALA ILE GLN ILE SEQRES 48 A 663 ALA TYR ARG LYS ILE SER ASN LYS MET ILE MET GLU TYR SEQRES 49 A 663 ILE ASP PRO ASN PHE SER PRO ASN THR LYS HIS LYS VAL SEQRES 50 A 663 THR LEU ALA GLU VAL ASN SER VAL LEU GLY VAL ASN LEU SEQRES 51 A 663 SER TYR PHE ASP LYS PRO GLU HIS HIS HIS HIS HIS HIS HET FAD A 701 84 HET PHE A 702 23 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM PHE PHENYLALANINE FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 PHE C9 H11 N O2 FORMUL 4 HOH *371(H2 O) HELIX 1 AA1 GLY A 27 ALA A 41 1 15 HELIX 2 AA2 MET A 95 LEU A 105 1 11 HELIX 3 AA3 LEU A 107 ASP A 109 5 3 HELIX 4 AA4 VAL A 133 TYR A 148 1 16 HELIX 5 AA5 ASP A 151 GLN A 155 5 5 HELIX 6 AA6 ASN A 158 VAL A 173 1 16 HELIX 7 AA7 GLY A 185 CYS A 196 1 12 HELIX 8 AA8 TYR A 204 TRP A 206 5 3 HELIX 9 AA9 SER A 207 MET A 215 1 9 HELIX 10 AB1 SER A 218 LEU A 229 1 12 HELIX 11 AB2 ASN A 232 SER A 237 1 6 HELIX 12 AB3 ASN A 240 GLU A 249 1 10 HELIX 13 AB4 SER A 265 GLY A 276 1 12 HELIX 14 AB5 PRO A 326 SER A 337 1 12 HELIX 15 AB6 SER A 337 GLN A 342 1 6 HELIX 16 AB7 PRO A 344 GLN A 356 1 13 HELIX 17 AB8 GLY A 376 GLY A 381 1 6 HELIX 18 AB9 ASN A 406 ARG A 418 1 13 HELIX 19 AC1 ASN A 423 LYS A 437 1 15 HELIX 20 AC2 TYR A 438 ARG A 440 5 3 HELIX 21 AC3 ASN A 452 ASN A 461 1 10 HELIX 22 AC4 HIS A 470 VAL A 475 1 6 HELIX 23 AC5 SER A 486 ASN A 502 1 17 HELIX 24 AC6 PRO A 526 GLN A 530 5 5 HELIX 25 AC7 ASN A 543 GLU A 553 1 11 HELIX 26 AC8 TRP A 571 GLY A 588 1 18 HELIX 27 AC9 PRO A 591 GLY A 601 1 11 HELIX 28 AD1 SER A 603 ILE A 624 1 22 SHEET 1 AA1 6 ILE A 280 HIS A 281 0 SHEET 2 AA1 6 LEU A 46 PHE A 49 1 N ILE A 48 O HIS A 281 SHEET 3 AA1 6 GLU A 18 VAL A 24 1 N ILE A 23 O ALA A 47 SHEET 4 AA1 6 VAL A 311 LEU A 323 1 O ILE A 322 N VAL A 24 SHEET 5 AA1 6 LYS A 297 ILE A 305 -1 N LEU A 300 O PHE A 316 SHEET 6 AA1 6 THR A 284 ASP A 292 -1 N ALA A 290 O VAL A 299 SHEET 1 AA2 5 ILE A 280 HIS A 281 0 SHEET 2 AA2 5 LEU A 46 PHE A 49 1 N ILE A 48 O HIS A 281 SHEET 3 AA2 5 GLU A 18 VAL A 24 1 N ILE A 23 O ALA A 47 SHEET 4 AA2 5 VAL A 311 LEU A 323 1 O ILE A 322 N VAL A 24 SHEET 5 AA2 5 LEU A 558 THR A 560 1 O PHE A 559 N VAL A 321 SHEET 1 AA3 2 SER A 61 LYS A 67 0 SHEET 2 AA3 2 THR A 78 GLU A 84 -1 O ILE A 79 N PHE A 66 SHEET 1 AA4 2 ILE A 111 PHE A 114 0 SHEET 2 AA4 2 PHE A 257 PHE A 260 -1 O THR A 259 N VAL A 112 SHEET 1 AA5 7 THR A 129 SER A 132 0 SHEET 2 AA5 7 ARG A 123 PHE A 126 -1 N LEU A 124 O PHE A 131 SHEET 3 AA5 7 ASN A 390 ALA A 392 1 O PHE A 391 N TYR A 125 SHEET 4 AA5 7 SER A 398 TYR A 403 -1 O VAL A 399 N ASN A 390 SHEET 5 AA5 7 ALA A 442 ASP A 449 -1 O THR A 445 N TYR A 400 SHEET 6 AA5 7 LEU A 363 TYR A 370 -1 N ILE A 366 O ILE A 446 SHEET 7 AA5 7 LEU A 511 TRP A 517 -1 O LEU A 511 N TYR A 369 SHEET 1 AA6 2 GLN A 197 TRP A 198 0 SHEET 2 AA6 2 GLU A 201 PRO A 202 -1 O GLU A 201 N TRP A 198 SHEET 1 AA7 2 THR A 358 GLN A 361 0 SHEET 2 AA7 2 VAL A 535 TRP A 538 -1 O GLN A 537 N SER A 359 SITE 1 AC1 37 VAL A 24 GLY A 25 GLY A 27 MET A 28 SITE 2 AC1 37 SER A 29 PHE A 49 GLU A 50 ARG A 51 SITE 3 AC1 37 GLY A 57 ARG A 58 LEU A 59 GLY A 86 SITE 4 AC1 37 GLY A 87 MET A 88 ARG A 89 SER A 285 SITE 5 AC1 37 ILE A 286 GLY A 324 LEU A 325 ALA A 329 SITE 6 AC1 37 LEU A 363 TYR A 447 GLY A 534 GLY A 562 SITE 7 AC1 37 GLU A 563 GLY A 570 TRP A 571 VAL A 572 SITE 8 AC1 37 PHE A 702 HOH A 813 HOH A 816 HOH A 943 SITE 9 AC1 37 HOH A 948 HOH A 964 HOH A1010 HOH A1049 SITE 10 AC1 37 HOH A1055 SITE 1 AC2 9 ARG A 89 PHE A 231 LEU A 247 TYR A 447 SITE 2 AC2 9 VAL A 535 GLN A 537 GLY A 570 TRP A 571 SITE 3 AC2 9 FAD A 701 CRYST1 131.971 131.971 191.353 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007577 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007577 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005226 0.00000