data_7C5W # _entry.id 7C5W # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.347 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7C5W pdb_00007c5w 10.2210/pdb7c5w/pdb WWPDB D_1300017037 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7C5W _pdbx_database_status.recvd_initial_deposition_date 2020-05-20 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Senda, M.' 1 0000-0003-3863-4503 'Senda, T.' 2 0000-0002-5153-928X # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Bmc Biol.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1741-7007 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 19 _citation.language ? _citation.page_first 105 _citation.page_last 105 _citation.title 'Characterization of a novel type of carbonic anhydrase that acts without metal cofactors.' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1186/s12915-021-01039-8 _citation.pdbx_database_id_PubMed 34006275 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hirakawa, Y.' 1 0000-0002-3780-354X primary 'Senda, M.' 2 ? primary 'Fukuda, K.' 3 ? primary 'Yu, H.Y.' 4 ? primary 'Ishida, M.' 5 ? primary 'Taira, M.' 6 ? primary 'Kinbara, K.' 7 ? primary 'Senda, T.' 8 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7C5W _cell.details ? _cell.formula_units_Z ? _cell.length_a 53.519 _cell.length_a_esd ? _cell.length_b 83.006 _cell.length_b_esd ? _cell.length_c 88.136 _cell.length_c_esd ? _cell.volume 391535.200 _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7C5W _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab' _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'iota-carbonic anhydrase' 19307.850 2 ? ? ? ? 2 non-polymer syn 'IODIDE ION' 126.904 2 ? ? ? ? 3 water nat water 18.015 12 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHDSGDKITATSSLKTPIVNRAITESEVLAAQKAWGEALVAISTTYDAKGKASAKALAEKVIDDAYGYQFGPVLFKPTL AISPRTFRTTRAGALAYFVGDDKAFPEDKGFALSSWRKVEIKNAAIFITGNTATTMGNVIITDKQGKATTVDKTWQFLKD DHGKLRIITHHSSLPYEQ ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHDSGDKITATSSLKTPIVNRAITESEVLAAQKAWGEALVAISTTYDAKGKASAKALAEKVIDDAYGYQFGPVLFKPTL AISPRTFRTTRAGALAYFVGDDKAFPEDKGFALSSWRKVEIKNAAIFITGNTATTMGNVIITDKQGKATTVDKTWQFLKD DHGKLRIITHHSSLPYEQ ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 ASP n 1 5 SER n 1 6 GLY n 1 7 ASP n 1 8 LYS n 1 9 ILE n 1 10 THR n 1 11 ALA n 1 12 THR n 1 13 SER n 1 14 SER n 1 15 LEU n 1 16 LYS n 1 17 THR n 1 18 PRO n 1 19 ILE n 1 20 VAL n 1 21 ASN n 1 22 ARG n 1 23 ALA n 1 24 ILE n 1 25 THR n 1 26 GLU n 1 27 SER n 1 28 GLU n 1 29 VAL n 1 30 LEU n 1 31 ALA n 1 32 ALA n 1 33 GLN n 1 34 LYS n 1 35 ALA n 1 36 TRP n 1 37 GLY n 1 38 GLU n 1 39 ALA n 1 40 LEU n 1 41 VAL n 1 42 ALA n 1 43 ILE n 1 44 SER n 1 45 THR n 1 46 THR n 1 47 TYR n 1 48 ASP n 1 49 ALA n 1 50 LYS n 1 51 GLY n 1 52 LYS n 1 53 ALA n 1 54 SER n 1 55 ALA n 1 56 LYS n 1 57 ALA n 1 58 LEU n 1 59 ALA n 1 60 GLU n 1 61 LYS n 1 62 VAL n 1 63 ILE n 1 64 ASP n 1 65 ASP n 1 66 ALA n 1 67 TYR n 1 68 GLY n 1 69 TYR n 1 70 GLN n 1 71 PHE n 1 72 GLY n 1 73 PRO n 1 74 VAL n 1 75 LEU n 1 76 PHE n 1 77 LYS n 1 78 PRO n 1 79 THR n 1 80 LEU n 1 81 ALA n 1 82 ILE n 1 83 SER n 1 84 PRO n 1 85 ARG n 1 86 THR n 1 87 PHE n 1 88 ARG n 1 89 THR n 1 90 THR n 1 91 ARG n 1 92 ALA n 1 93 GLY n 1 94 ALA n 1 95 LEU n 1 96 ALA n 1 97 TYR n 1 98 PHE n 1 99 VAL n 1 100 GLY n 1 101 ASP n 1 102 ASP n 1 103 LYS n 1 104 ALA n 1 105 PHE n 1 106 PRO n 1 107 GLU n 1 108 ASP n 1 109 LYS n 1 110 GLY n 1 111 PHE n 1 112 ALA n 1 113 LEU n 1 114 SER n 1 115 SER n 1 116 TRP n 1 117 ARG n 1 118 LYS n 1 119 VAL n 1 120 GLU n 1 121 ILE n 1 122 LYS n 1 123 ASN n 1 124 ALA n 1 125 ALA n 1 126 ILE n 1 127 PHE n 1 128 ILE n 1 129 THR n 1 130 GLY n 1 131 ASN n 1 132 THR n 1 133 ALA n 1 134 THR n 1 135 THR n 1 136 MET n 1 137 GLY n 1 138 ASN n 1 139 VAL n 1 140 ILE n 1 141 ILE n 1 142 THR n 1 143 ASP n 1 144 LYS n 1 145 GLN n 1 146 GLY n 1 147 LYS n 1 148 ALA n 1 149 THR n 1 150 THR n 1 151 VAL n 1 152 ASP n 1 153 LYS n 1 154 THR n 1 155 TRP n 1 156 GLN n 1 157 PHE n 1 158 LEU n 1 159 LYS n 1 160 ASP n 1 161 ASP n 1 162 HIS n 1 163 GLY n 1 164 LYS n 1 165 LEU n 1 166 ARG n 1 167 ILE n 1 168 ILE n 1 169 THR n 1 170 HIS n 1 171 HIS n 1 172 SER n 1 173 SER n 1 174 LEU n 1 175 PRO n 1 176 TYR n 1 177 GLU n 1 178 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 178 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene all2909 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'PCC 7120' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Nostoc sp. PCC 7120 = FACHB-418' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 103690 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8YT18_NOSS1 _struct_ref.pdbx_db_accession Q8YT18 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DSGDKITATSSLKTPIVNRAITESEVLAAQKAWGEALVAISTTYDAKGKASAKALAEKVIDDAYGYQFGPVLFKPTLAIS PRTFRTTRAGALAYFVGDDKAFPEDKGFALSSWRKVEIKNAAIFITGNTATTMGNVIITDKQGKATTVDKTWQFLKDDHG KLRIITHHSSLPYEQ ; _struct_ref.pdbx_align_begin 31 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7C5W A 4 ? 178 ? Q8YT18 31 ? 205 ? 31 205 2 1 7C5W B 4 ? 178 ? Q8YT18 31 ? 205 ? 31 205 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7C5W GLY A 1 ? UNP Q8YT18 ? ? 'expression tag' 28 1 1 7C5W SER A 2 ? UNP Q8YT18 ? ? 'expression tag' 29 2 1 7C5W HIS A 3 ? UNP Q8YT18 ? ? 'expression tag' 30 3 2 7C5W GLY B 1 ? UNP Q8YT18 ? ? 'expression tag' 28 4 2 7C5W SER B 2 ? UNP Q8YT18 ? ? 'expression tag' 29 5 2 7C5W HIS B 3 ? UNP Q8YT18 ? ? 'expression tag' 30 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IOD non-polymer . 'IODIDE ION' ? 'I -1' 126.904 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7C5W _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.53 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 51.48 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '2.4 M sodium malonate pH 7.0' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 95 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-11-25 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator Si111 _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.9000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-17A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.9000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL-17A _diffrn_source.pdbx_synchrotron_site 'Photon Factory' # _reflns.B_iso_Wilson_estimate 55.49 _reflns.entry_id 7C5W _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.30 _reflns.d_resolution_low 45.75 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 33691 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 13.6 _reflns.pdbx_Rmerge_I_obs 0.058 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 25.18 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.42 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 4738 _reflns_shell.percent_possible_all 99.60 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.9000 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 12.6 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 64.12 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7C5W _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.30 _refine.ls_d_res_low 45.75 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 33669 _refine.ls_number_reflns_R_free 1677 _refine.ls_number_reflns_R_work 31992 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.87 _refine.ls_percent_reflns_R_free 4.98 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2226 _refine.ls_R_factor_R_free 0.2438 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2214 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.37 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 32.6286 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.3238 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 45.75 _refine_hist.number_atoms_solvent 12 _refine_hist.number_atoms_total 2425 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 2411 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0134 ? 2465 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.6883 ? 3372 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0902 ? 399 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0053 ? 432 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 17.4907 ? 820 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.30 2.37 . . 138 2639 99.00 . . . 0.3829 . 0.3635 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.37 2.44 . . 139 2664 99.86 . . . 0.3497 . 0.3323 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.44 2.53 . . 140 2669 99.93 . . . 0.3813 . 0.3118 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.53 2.63 . . 144 2638 99.93 . . . 0.3984 . 0.2994 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.63 2.75 . . 143 2692 99.93 . . . 0.3446 . 0.2751 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.75 2.90 . . 135 2634 99.93 . . . 0.3100 . 0.2518 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.90 3.08 . . 143 2701 99.93 . . . 0.2684 . 0.2733 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.08 3.32 . . 137 2674 100.00 . . . 0.3238 . 0.2490 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.32 3.65 . . 141 2653 100.00 . . . 0.2862 . 0.2455 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.65 4.18 . . 140 2670 100.00 . . . 0.2490 . 0.2062 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.18 5.26 . . 140 2684 100.00 . . . 0.1473 . 0.1665 . . . . . . . . . . . 'X-RAY DIFFRACTION' 5.26 45.75 . . 137 2674 100.00 . . . 0.1910 . 0.1859 . . . . . . . . . . . # _struct.entry_id 7C5W _struct.title 'Crystal structure of the iota-carbonic anhydrase from cyanobacterium complexed with iodide' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7C5W _struct_keywords.text 'carbonic anhydrase, iodide complex, LYASE' _struct_keywords.pdbx_keywords LYASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 25 ? GLY A 51 ? THR A 52 GLY A 78 1 ? 27 HELX_P HELX_P2 AA2 GLY A 51 ? TYR A 67 ? GLY A 78 TYR A 94 1 ? 17 HELX_P HELX_P3 AA3 GLY A 68 ? GLY A 72 ? GLY A 95 GLY A 99 5 ? 5 HELX_P HELX_P4 AA4 THR A 90 ? GLY A 100 ? THR A 117 GLY A 127 1 ? 11 HELX_P HELX_P5 AA5 GLY A 110 ? SER A 114 ? GLY A 137 SER A 141 5 ? 5 HELX_P HELX_P6 AA6 THR B 25 ? GLY B 51 ? THR B 52 GLY B 78 1 ? 27 HELX_P HELX_P7 AA7 GLY B 51 ? TYR B 67 ? GLY B 78 TYR B 94 1 ? 17 HELX_P HELX_P8 AA8 GLY B 68 ? GLY B 72 ? GLY B 95 GLY B 99 5 ? 5 HELX_P HELX_P9 AA9 THR B 90 ? GLY B 100 ? THR B 117 GLY B 127 1 ? 11 HELX_P HELX_P10 AB1 GLY B 110 ? SER B 114 ? GLY B 137 SER B 141 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 75 ? LYS A 77 ? LEU A 102 LYS A 104 AA1 2 LEU A 165 ? SER A 173 ? LEU A 192 SER A 200 AA1 3 ALA A 148 ? LYS A 159 ? ALA A 175 LYS A 186 AA1 4 THR A 132 ? ASP A 143 ? THR A 159 ASP A 170 AA1 5 TRP A 116 ? ILE A 128 ? TRP A 143 ILE A 155 AA2 1 LEU B 75 ? LYS B 77 ? LEU B 102 LYS B 104 AA2 2 LEU B 165 ? SER B 173 ? LEU B 192 SER B 200 AA2 3 ALA B 148 ? LYS B 159 ? ALA B 175 LYS B 186 AA2 4 THR B 132 ? ASP B 143 ? THR B 159 ASP B 170 AA2 5 TRP B 116 ? ILE B 128 ? TRP B 143 ILE B 155 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 75 ? N LEU A 102 O HIS A 170 ? O HIS A 197 AA1 2 3 O SER A 173 ? O SER A 200 N ASP A 152 ? N ASP A 179 AA1 3 4 O PHE A 157 ? O PHE A 184 N ALA A 133 ? N ALA A 160 AA1 4 5 O ASN A 138 ? O ASN A 165 N LYS A 122 ? N LYS A 149 AA2 1 2 N LEU B 75 ? N LEU B 102 O HIS B 170 ? O HIS B 197 AA2 2 3 O SER B 173 ? O SER B 200 N ASP B 152 ? N ASP B 179 AA2 3 4 O PHE B 157 ? O PHE B 184 N ALA B 133 ? N ALA B 160 AA2 4 5 O ASN B 138 ? O ASN B 165 N LYS B 122 ? N LYS B 149 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A IOD 301 ? 2 'binding site for residue IOD A 301' AC2 Software B IOD 301 ? 2 'binding site for residue IOD B 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 THR A 79 ? THR A 106 . ? 1_555 ? 2 AC1 2 TYR A 97 ? TYR A 124 . ? 1_555 ? 3 AC2 2 THR B 79 ? THR B 106 . ? 1_555 ? 4 AC2 2 TYR B 97 ? TYR B 124 . ? 1_555 ? # _atom_sites.entry_id 7C5W _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.018685 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012047 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011346 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? I ? ? 40.26819 12.56501 ? ? 1.42647 27.02115 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 28 ? ? ? A . n A 1 2 SER 2 29 ? ? ? A . n A 1 3 HIS 3 30 ? ? ? A . n A 1 4 ASP 4 31 ? ? ? A . n A 1 5 SER 5 32 ? ? ? A . n A 1 6 GLY 6 33 ? ? ? A . n A 1 7 ASP 7 34 ? ? ? A . n A 1 8 LYS 8 35 ? ? ? A . n A 1 9 ILE 9 36 ? ? ? A . n A 1 10 THR 10 37 ? ? ? A . n A 1 11 ALA 11 38 ? ? ? A . n A 1 12 THR 12 39 ? ? ? A . n A 1 13 SER 13 40 ? ? ? A . n A 1 14 SER 14 41 ? ? ? A . n A 1 15 LEU 15 42 42 LEU LEU A . n A 1 16 LYS 16 43 43 LYS LYS A . n A 1 17 THR 17 44 44 THR THR A . n A 1 18 PRO 18 45 45 PRO PRO A . n A 1 19 ILE 19 46 46 ILE ILE A . n A 1 20 VAL 20 47 47 VAL VAL A . n A 1 21 ASN 21 48 48 ASN ASN A . n A 1 22 ARG 22 49 49 ARG ARG A . n A 1 23 ALA 23 50 50 ALA ALA A . n A 1 24 ILE 24 51 51 ILE ILE A . n A 1 25 THR 25 52 52 THR THR A . n A 1 26 GLU 26 53 53 GLU GLU A . n A 1 27 SER 27 54 54 SER SER A . n A 1 28 GLU 28 55 55 GLU GLU A . n A 1 29 VAL 29 56 56 VAL VAL A . n A 1 30 LEU 30 57 57 LEU LEU A . n A 1 31 ALA 31 58 58 ALA ALA A . n A 1 32 ALA 32 59 59 ALA ALA A . n A 1 33 GLN 33 60 60 GLN GLN A . n A 1 34 LYS 34 61 61 LYS LYS A . n A 1 35 ALA 35 62 62 ALA ALA A . n A 1 36 TRP 36 63 63 TRP TRP A . n A 1 37 GLY 37 64 64 GLY GLY A . n A 1 38 GLU 38 65 65 GLU GLU A . n A 1 39 ALA 39 66 66 ALA ALA A . n A 1 40 LEU 40 67 67 LEU LEU A . n A 1 41 VAL 41 68 68 VAL VAL A . n A 1 42 ALA 42 69 69 ALA ALA A . n A 1 43 ILE 43 70 70 ILE ILE A . n A 1 44 SER 44 71 71 SER SER A . n A 1 45 THR 45 72 72 THR THR A . n A 1 46 THR 46 73 73 THR THR A . n A 1 47 TYR 47 74 74 TYR TYR A . n A 1 48 ASP 48 75 75 ASP ASP A . n A 1 49 ALA 49 76 76 ALA ALA A . n A 1 50 LYS 50 77 77 LYS LYS A . n A 1 51 GLY 51 78 78 GLY GLY A . n A 1 52 LYS 52 79 79 LYS LYS A . n A 1 53 ALA 53 80 80 ALA ALA A . n A 1 54 SER 54 81 81 SER SER A . n A 1 55 ALA 55 82 82 ALA ALA A . n A 1 56 LYS 56 83 83 LYS LYS A . n A 1 57 ALA 57 84 84 ALA ALA A . n A 1 58 LEU 58 85 85 LEU LEU A . n A 1 59 ALA 59 86 86 ALA ALA A . n A 1 60 GLU 60 87 87 GLU GLU A . n A 1 61 LYS 61 88 88 LYS LYS A . n A 1 62 VAL 62 89 89 VAL VAL A . n A 1 63 ILE 63 90 90 ILE ILE A . n A 1 64 ASP 64 91 91 ASP ASP A . n A 1 65 ASP 65 92 92 ASP ASP A . n A 1 66 ALA 66 93 93 ALA ALA A . n A 1 67 TYR 67 94 94 TYR TYR A . n A 1 68 GLY 68 95 95 GLY GLY A . n A 1 69 TYR 69 96 96 TYR TYR A . n A 1 70 GLN 70 97 97 GLN GLN A . n A 1 71 PHE 71 98 98 PHE PHE A . n A 1 72 GLY 72 99 99 GLY GLY A . n A 1 73 PRO 73 100 100 PRO PRO A . n A 1 74 VAL 74 101 101 VAL VAL A . n A 1 75 LEU 75 102 102 LEU LEU A . n A 1 76 PHE 76 103 103 PHE PHE A . n A 1 77 LYS 77 104 104 LYS LYS A . n A 1 78 PRO 78 105 105 PRO PRO A . n A 1 79 THR 79 106 106 THR THR A . n A 1 80 LEU 80 107 107 LEU LEU A . n A 1 81 ALA 81 108 108 ALA ALA A . n A 1 82 ILE 82 109 109 ILE ILE A . n A 1 83 SER 83 110 110 SER SER A . n A 1 84 PRO 84 111 111 PRO PRO A . n A 1 85 ARG 85 112 112 ARG ARG A . n A 1 86 THR 86 113 113 THR THR A . n A 1 87 PHE 87 114 114 PHE PHE A . n A 1 88 ARG 88 115 115 ARG ARG A . n A 1 89 THR 89 116 116 THR THR A . n A 1 90 THR 90 117 117 THR THR A . n A 1 91 ARG 91 118 118 ARG ARG A . n A 1 92 ALA 92 119 119 ALA ALA A . n A 1 93 GLY 93 120 120 GLY GLY A . n A 1 94 ALA 94 121 121 ALA ALA A . n A 1 95 LEU 95 122 122 LEU LEU A . n A 1 96 ALA 96 123 123 ALA ALA A . n A 1 97 TYR 97 124 124 TYR TYR A . n A 1 98 PHE 98 125 125 PHE PHE A . n A 1 99 VAL 99 126 126 VAL VAL A . n A 1 100 GLY 100 127 127 GLY GLY A . n A 1 101 ASP 101 128 128 ASP ASP A . n A 1 102 ASP 102 129 129 ASP ASP A . n A 1 103 LYS 103 130 130 LYS LYS A . n A 1 104 ALA 104 131 131 ALA ALA A . n A 1 105 PHE 105 132 132 PHE PHE A . n A 1 106 PRO 106 133 133 PRO PRO A . n A 1 107 GLU 107 134 134 GLU GLU A . n A 1 108 ASP 108 135 135 ASP ASP A . n A 1 109 LYS 109 136 136 LYS LYS A . n A 1 110 GLY 110 137 137 GLY GLY A . n A 1 111 PHE 111 138 138 PHE PHE A . n A 1 112 ALA 112 139 139 ALA ALA A . n A 1 113 LEU 113 140 140 LEU LEU A . n A 1 114 SER 114 141 141 SER SER A . n A 1 115 SER 115 142 142 SER SER A . n A 1 116 TRP 116 143 143 TRP TRP A . n A 1 117 ARG 117 144 144 ARG ARG A . n A 1 118 LYS 118 145 145 LYS LYS A . n A 1 119 VAL 119 146 146 VAL VAL A . n A 1 120 GLU 120 147 147 GLU GLU A . n A 1 121 ILE 121 148 148 ILE ILE A . n A 1 122 LYS 122 149 149 LYS LYS A . n A 1 123 ASN 123 150 150 ASN ASN A . n A 1 124 ALA 124 151 151 ALA ALA A . n A 1 125 ALA 125 152 152 ALA ALA A . n A 1 126 ILE 126 153 153 ILE ILE A . n A 1 127 PHE 127 154 154 PHE PHE A . n A 1 128 ILE 128 155 155 ILE ILE A . n A 1 129 THR 129 156 156 THR THR A . n A 1 130 GLY 130 157 157 GLY GLY A . n A 1 131 ASN 131 158 158 ASN ASN A . n A 1 132 THR 132 159 159 THR THR A . n A 1 133 ALA 133 160 160 ALA ALA A . n A 1 134 THR 134 161 161 THR THR A . n A 1 135 THR 135 162 162 THR THR A . n A 1 136 MET 136 163 163 MET MET A . n A 1 137 GLY 137 164 164 GLY GLY A . n A 1 138 ASN 138 165 165 ASN ASN A . n A 1 139 VAL 139 166 166 VAL VAL A . n A 1 140 ILE 140 167 167 ILE ILE A . n A 1 141 ILE 141 168 168 ILE ILE A . n A 1 142 THR 142 169 169 THR THR A . n A 1 143 ASP 143 170 170 ASP ASP A . n A 1 144 LYS 144 171 171 LYS LYS A . n A 1 145 GLN 145 172 172 GLN GLN A . n A 1 146 GLY 146 173 173 GLY GLY A . n A 1 147 LYS 147 174 174 LYS LYS A . n A 1 148 ALA 148 175 175 ALA ALA A . n A 1 149 THR 149 176 176 THR THR A . n A 1 150 THR 150 177 177 THR THR A . n A 1 151 VAL 151 178 178 VAL VAL A . n A 1 152 ASP 152 179 179 ASP ASP A . n A 1 153 LYS 153 180 180 LYS LYS A . n A 1 154 THR 154 181 181 THR THR A . n A 1 155 TRP 155 182 182 TRP TRP A . n A 1 156 GLN 156 183 183 GLN GLN A . n A 1 157 PHE 157 184 184 PHE PHE A . n A 1 158 LEU 158 185 185 LEU LEU A . n A 1 159 LYS 159 186 186 LYS LYS A . n A 1 160 ASP 160 187 187 ASP ASP A . n A 1 161 ASP 161 188 188 ASP ASP A . n A 1 162 HIS 162 189 189 HIS HIS A . n A 1 163 GLY 163 190 190 GLY GLY A . n A 1 164 LYS 164 191 191 LYS LYS A . n A 1 165 LEU 165 192 192 LEU LEU A . n A 1 166 ARG 166 193 193 ARG ARG A . n A 1 167 ILE 167 194 194 ILE ILE A . n A 1 168 ILE 168 195 195 ILE ILE A . n A 1 169 THR 169 196 196 THR THR A . n A 1 170 HIS 170 197 197 HIS HIS A . n A 1 171 HIS 171 198 198 HIS HIS A . n A 1 172 SER 172 199 199 SER SER A . n A 1 173 SER 173 200 200 SER SER A . n A 1 174 LEU 174 201 201 LEU LEU A . n A 1 175 PRO 175 202 202 PRO PRO A . n A 1 176 TYR 176 203 203 TYR TYR A . n A 1 177 GLU 177 204 204 GLU GLU A . n A 1 178 GLN 178 205 205 GLN GLN A . n B 1 1 GLY 1 28 ? ? ? B . n B 1 2 SER 2 29 ? ? ? B . n B 1 3 HIS 3 30 ? ? ? B . n B 1 4 ASP 4 31 ? ? ? B . n B 1 5 SER 5 32 ? ? ? B . n B 1 6 GLY 6 33 ? ? ? B . n B 1 7 ASP 7 34 ? ? ? B . n B 1 8 LYS 8 35 ? ? ? B . n B 1 9 ILE 9 36 ? ? ? B . n B 1 10 THR 10 37 ? ? ? B . n B 1 11 ALA 11 38 ? ? ? B . n B 1 12 THR 12 39 ? ? ? B . n B 1 13 SER 13 40 ? ? ? B . n B 1 14 SER 14 41 ? ? ? B . n B 1 15 LEU 15 42 ? ? ? B . n B 1 16 LYS 16 43 43 LYS LYS B . n B 1 17 THR 17 44 44 THR THR B . n B 1 18 PRO 18 45 45 PRO PRO B . n B 1 19 ILE 19 46 46 ILE ILE B . n B 1 20 VAL 20 47 47 VAL VAL B . n B 1 21 ASN 21 48 48 ASN ASN B . n B 1 22 ARG 22 49 49 ARG ARG B . n B 1 23 ALA 23 50 50 ALA ALA B . n B 1 24 ILE 24 51 51 ILE ILE B . n B 1 25 THR 25 52 52 THR THR B . n B 1 26 GLU 26 53 53 GLU GLU B . n B 1 27 SER 27 54 54 SER SER B . n B 1 28 GLU 28 55 55 GLU GLU B . n B 1 29 VAL 29 56 56 VAL VAL B . n B 1 30 LEU 30 57 57 LEU LEU B . n B 1 31 ALA 31 58 58 ALA ALA B . n B 1 32 ALA 32 59 59 ALA ALA B . n B 1 33 GLN 33 60 60 GLN GLN B . n B 1 34 LYS 34 61 61 LYS LYS B . n B 1 35 ALA 35 62 62 ALA ALA B . n B 1 36 TRP 36 63 63 TRP TRP B . n B 1 37 GLY 37 64 64 GLY GLY B . n B 1 38 GLU 38 65 65 GLU GLU B . n B 1 39 ALA 39 66 66 ALA ALA B . n B 1 40 LEU 40 67 67 LEU LEU B . n B 1 41 VAL 41 68 68 VAL VAL B . n B 1 42 ALA 42 69 69 ALA ALA B . n B 1 43 ILE 43 70 70 ILE ILE B . n B 1 44 SER 44 71 71 SER SER B . n B 1 45 THR 45 72 72 THR THR B . n B 1 46 THR 46 73 73 THR THR B . n B 1 47 TYR 47 74 74 TYR TYR B . n B 1 48 ASP 48 75 75 ASP ASP B . n B 1 49 ALA 49 76 76 ALA ALA B . n B 1 50 LYS 50 77 77 LYS LYS B . n B 1 51 GLY 51 78 78 GLY GLY B . n B 1 52 LYS 52 79 79 LYS LYS B . n B 1 53 ALA 53 80 80 ALA ALA B . n B 1 54 SER 54 81 81 SER SER B . n B 1 55 ALA 55 82 82 ALA ALA B . n B 1 56 LYS 56 83 83 LYS LYS B . n B 1 57 ALA 57 84 84 ALA ALA B . n B 1 58 LEU 58 85 85 LEU LEU B . n B 1 59 ALA 59 86 86 ALA ALA B . n B 1 60 GLU 60 87 87 GLU GLU B . n B 1 61 LYS 61 88 88 LYS LYS B . n B 1 62 VAL 62 89 89 VAL VAL B . n B 1 63 ILE 63 90 90 ILE ILE B . n B 1 64 ASP 64 91 91 ASP ASP B . n B 1 65 ASP 65 92 92 ASP ASP B . n B 1 66 ALA 66 93 93 ALA ALA B . n B 1 67 TYR 67 94 94 TYR TYR B . n B 1 68 GLY 68 95 95 GLY GLY B . n B 1 69 TYR 69 96 96 TYR TYR B . n B 1 70 GLN 70 97 97 GLN GLN B . n B 1 71 PHE 71 98 98 PHE PHE B . n B 1 72 GLY 72 99 99 GLY GLY B . n B 1 73 PRO 73 100 100 PRO PRO B . n B 1 74 VAL 74 101 101 VAL VAL B . n B 1 75 LEU 75 102 102 LEU LEU B . n B 1 76 PHE 76 103 103 PHE PHE B . n B 1 77 LYS 77 104 104 LYS LYS B . n B 1 78 PRO 78 105 105 PRO PRO B . n B 1 79 THR 79 106 106 THR THR B . n B 1 80 LEU 80 107 107 LEU LEU B . n B 1 81 ALA 81 108 108 ALA ALA B . n B 1 82 ILE 82 109 109 ILE ILE B . n B 1 83 SER 83 110 110 SER SER B . n B 1 84 PRO 84 111 111 PRO PRO B . n B 1 85 ARG 85 112 112 ARG ARG B . n B 1 86 THR 86 113 113 THR THR B . n B 1 87 PHE 87 114 114 PHE PHE B . n B 1 88 ARG 88 115 115 ARG ARG B . n B 1 89 THR 89 116 116 THR THR B . n B 1 90 THR 90 117 117 THR THR B . n B 1 91 ARG 91 118 118 ARG ARG B . n B 1 92 ALA 92 119 119 ALA ALA B . n B 1 93 GLY 93 120 120 GLY GLY B . n B 1 94 ALA 94 121 121 ALA ALA B . n B 1 95 LEU 95 122 122 LEU LEU B . n B 1 96 ALA 96 123 123 ALA ALA B . n B 1 97 TYR 97 124 124 TYR TYR B . n B 1 98 PHE 98 125 125 PHE PHE B . n B 1 99 VAL 99 126 126 VAL VAL B . n B 1 100 GLY 100 127 127 GLY GLY B . n B 1 101 ASP 101 128 128 ASP ASP B . n B 1 102 ASP 102 129 129 ASP ASP B . n B 1 103 LYS 103 130 130 LYS LYS B . n B 1 104 ALA 104 131 131 ALA ALA B . n B 1 105 PHE 105 132 132 PHE PHE B . n B 1 106 PRO 106 133 133 PRO PRO B . n B 1 107 GLU 107 134 134 GLU GLU B . n B 1 108 ASP 108 135 135 ASP ASP B . n B 1 109 LYS 109 136 136 LYS LYS B . n B 1 110 GLY 110 137 137 GLY GLY B . n B 1 111 PHE 111 138 138 PHE PHE B . n B 1 112 ALA 112 139 139 ALA ALA B . n B 1 113 LEU 113 140 140 LEU LEU B . n B 1 114 SER 114 141 141 SER SER B . n B 1 115 SER 115 142 142 SER SER B . n B 1 116 TRP 116 143 143 TRP TRP B . n B 1 117 ARG 117 144 144 ARG ARG B . n B 1 118 LYS 118 145 145 LYS LYS B . n B 1 119 VAL 119 146 146 VAL VAL B . n B 1 120 GLU 120 147 147 GLU GLU B . n B 1 121 ILE 121 148 148 ILE ILE B . n B 1 122 LYS 122 149 149 LYS LYS B . n B 1 123 ASN 123 150 150 ASN ASN B . n B 1 124 ALA 124 151 151 ALA ALA B . n B 1 125 ALA 125 152 152 ALA ALA B . n B 1 126 ILE 126 153 153 ILE ILE B . n B 1 127 PHE 127 154 154 PHE PHE B . n B 1 128 ILE 128 155 155 ILE ILE B . n B 1 129 THR 129 156 156 THR THR B . n B 1 130 GLY 130 157 157 GLY GLY B . n B 1 131 ASN 131 158 158 ASN ASN B . n B 1 132 THR 132 159 159 THR THR B . n B 1 133 ALA 133 160 160 ALA ALA B . n B 1 134 THR 134 161 161 THR THR B . n B 1 135 THR 135 162 162 THR THR B . n B 1 136 MET 136 163 163 MET MET B . n B 1 137 GLY 137 164 164 GLY GLY B . n B 1 138 ASN 138 165 165 ASN ASN B . n B 1 139 VAL 139 166 166 VAL VAL B . n B 1 140 ILE 140 167 167 ILE ILE B . n B 1 141 ILE 141 168 168 ILE ILE B . n B 1 142 THR 142 169 169 THR THR B . n B 1 143 ASP 143 170 170 ASP ASP B . n B 1 144 LYS 144 171 171 LYS LYS B . n B 1 145 GLN 145 172 172 GLN GLN B . n B 1 146 GLY 146 173 173 GLY GLY B . n B 1 147 LYS 147 174 174 LYS LYS B . n B 1 148 ALA 148 175 175 ALA ALA B . n B 1 149 THR 149 176 176 THR THR B . n B 1 150 THR 150 177 177 THR THR B . n B 1 151 VAL 151 178 178 VAL VAL B . n B 1 152 ASP 152 179 179 ASP ASP B . n B 1 153 LYS 153 180 180 LYS LYS B . n B 1 154 THR 154 181 181 THR THR B . n B 1 155 TRP 155 182 182 TRP TRP B . n B 1 156 GLN 156 183 183 GLN GLN B . n B 1 157 PHE 157 184 184 PHE PHE B . n B 1 158 LEU 158 185 185 LEU LEU B . n B 1 159 LYS 159 186 186 LYS LYS B . n B 1 160 ASP 160 187 187 ASP ASP B . n B 1 161 ASP 161 188 188 ASP ASP B . n B 1 162 HIS 162 189 189 HIS HIS B . n B 1 163 GLY 163 190 190 GLY GLY B . n B 1 164 LYS 164 191 191 LYS LYS B . n B 1 165 LEU 165 192 192 LEU LEU B . n B 1 166 ARG 166 193 193 ARG ARG B . n B 1 167 ILE 167 194 194 ILE ILE B . n B 1 168 ILE 168 195 195 ILE ILE B . n B 1 169 THR 169 196 196 THR THR B . n B 1 170 HIS 170 197 197 HIS HIS B . n B 1 171 HIS 171 198 198 HIS HIS B . n B 1 172 SER 172 199 199 SER SER B . n B 1 173 SER 173 200 200 SER SER B . n B 1 174 LEU 174 201 201 LEU LEU B . n B 1 175 PRO 175 202 202 PRO PRO B . n B 1 176 TYR 176 203 203 TYR TYR B . n B 1 177 GLU 177 204 204 GLU GLU B . n B 1 178 GLN 178 205 205 GLN GLN B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 IOD 1 301 1 IOD IOD A . D 2 IOD 1 301 2 IOD IOD B . E 3 HOH 1 401 13 HOH HOH A . E 3 HOH 2 402 15 HOH HOH A . E 3 HOH 3 403 11 HOH HOH A . E 3 HOH 4 404 18 HOH HOH A . E 3 HOH 5 405 19 HOH HOH A . E 3 HOH 6 406 10 HOH HOH A . F 3 HOH 1 401 2 HOH HOH B . F 3 HOH 2 402 22 HOH HOH B . F 3 HOH 3 403 5 HOH HOH B . F 3 HOH 4 404 16 HOH HOH B . F 3 HOH 5 405 17 HOH HOH B . F 3 HOH 6 406 6 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 10900 ? 1 MORE -100 ? 1 'SSA (A^2)' 24070 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,-y,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-04-28 2 'Structure model' 1 1 2021-08-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.pdbx_database_id_DOI' 5 2 'Structure model' '_citation.pdbx_database_id_PubMed' 6 2 'Structure model' '_citation.title' 7 2 'Structure model' '_database_2.pdbx_DOI' 8 2 'Structure model' '_database_2.pdbx_database_accession' # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 x+1/2,-y+1/2,-z 3 -x+1/2,y+1/2,-z 4 -x,-y,z # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.17.1_3660 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? CRANK2 ? ? ? . 4 # _pdbx_entry_details.entry_id 7C5W _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 112 ? ? -109.24 57.04 2 1 ARG B 112 ? ? -114.10 56.18 3 1 ARG B 144 ? ? -139.69 -36.81 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LEU 42 ? CG ? A LEU 15 CG 2 1 Y 1 A LEU 42 ? CD1 ? A LEU 15 CD1 3 1 Y 1 A LEU 42 ? CD2 ? A LEU 15 CD2 4 1 Y 1 A LYS 43 ? CG ? A LYS 16 CG 5 1 Y 1 A LYS 43 ? CD ? A LYS 16 CD 6 1 Y 1 A LYS 43 ? CE ? A LYS 16 CE 7 1 Y 1 A LYS 43 ? NZ ? A LYS 16 NZ 8 1 Y 1 A LYS 61 ? CG ? A LYS 34 CG 9 1 Y 1 A LYS 61 ? CD ? A LYS 34 CD 10 1 Y 1 A LYS 61 ? CE ? A LYS 34 CE 11 1 Y 1 A LYS 61 ? NZ ? A LYS 34 NZ 12 1 Y 1 A LYS 79 ? CG ? A LYS 52 CG 13 1 Y 1 A LYS 79 ? CD ? A LYS 52 CD 14 1 Y 1 A LYS 79 ? CE ? A LYS 52 CE 15 1 Y 1 A LYS 79 ? NZ ? A LYS 52 NZ 16 1 Y 1 A LYS 83 ? CG ? A LYS 56 CG 17 1 Y 1 A LYS 83 ? CD ? A LYS 56 CD 18 1 Y 1 A LYS 83 ? CE ? A LYS 56 CE 19 1 Y 1 A LYS 83 ? NZ ? A LYS 56 NZ 20 1 Y 1 A LYS 88 ? CG ? A LYS 61 CG 21 1 Y 1 A LYS 88 ? CD ? A LYS 61 CD 22 1 Y 1 A LYS 88 ? CE ? A LYS 61 CE 23 1 Y 1 A LYS 88 ? NZ ? A LYS 61 NZ 24 1 Y 1 A ILE 109 ? CG1 ? A ILE 82 CG1 25 1 Y 1 A ILE 109 ? CG2 ? A ILE 82 CG2 26 1 Y 1 A ILE 109 ? CD1 ? A ILE 82 CD1 27 1 Y 1 A SER 110 ? OG ? A SER 83 OG 28 1 Y 1 A LYS 130 ? CG ? A LYS 103 CG 29 1 Y 1 A LYS 130 ? CD ? A LYS 103 CD 30 1 Y 1 A LYS 130 ? CE ? A LYS 103 CE 31 1 Y 1 A LYS 130 ? NZ ? A LYS 103 NZ 32 1 Y 1 A GLU 134 ? CG ? A GLU 107 CG 33 1 Y 1 A GLU 134 ? CD ? A GLU 107 CD 34 1 Y 1 A GLU 134 ? OE1 ? A GLU 107 OE1 35 1 Y 1 A GLU 134 ? OE2 ? A GLU 107 OE2 36 1 Y 1 A LYS 136 ? CG ? A LYS 109 CG 37 1 Y 1 A LYS 136 ? CD ? A LYS 109 CD 38 1 Y 1 A LYS 136 ? CE ? A LYS 109 CE 39 1 Y 1 A LYS 136 ? NZ ? A LYS 109 NZ 40 1 Y 1 A SER 142 ? OG ? A SER 115 OG 41 1 Y 1 A LYS 145 ? CG ? A LYS 118 CG 42 1 Y 1 A LYS 145 ? CD ? A LYS 118 CD 43 1 Y 1 A LYS 145 ? CE ? A LYS 118 CE 44 1 Y 1 A LYS 145 ? NZ ? A LYS 118 NZ 45 1 Y 1 A GLN 172 ? CG ? A GLN 145 CG 46 1 Y 1 A GLN 172 ? CD ? A GLN 145 CD 47 1 Y 1 A GLN 172 ? OE1 ? A GLN 145 OE1 48 1 Y 1 A GLN 172 ? NE2 ? A GLN 145 NE2 49 1 Y 1 A LYS 174 ? CG ? A LYS 147 CG 50 1 Y 1 A LYS 174 ? CD ? A LYS 147 CD 51 1 Y 1 A LYS 174 ? CE ? A LYS 147 CE 52 1 Y 1 A LYS 174 ? NZ ? A LYS 147 NZ 53 1 Y 1 A LYS 191 ? CG ? A LYS 164 CG 54 1 Y 1 A LYS 191 ? CD ? A LYS 164 CD 55 1 Y 1 A LYS 191 ? CE ? A LYS 164 CE 56 1 Y 1 A LYS 191 ? NZ ? A LYS 164 NZ 57 1 Y 1 A GLU 204 ? CG ? A GLU 177 CG 58 1 Y 1 A GLU 204 ? CD ? A GLU 177 CD 59 1 Y 1 A GLU 204 ? OE1 ? A GLU 177 OE1 60 1 Y 1 A GLU 204 ? OE2 ? A GLU 177 OE2 61 1 Y 1 A GLN 205 ? CG ? A GLN 178 CG 62 1 Y 1 A GLN 205 ? CD ? A GLN 178 CD 63 1 Y 1 A GLN 205 ? OE1 ? A GLN 178 OE1 64 1 Y 1 A GLN 205 ? NE2 ? A GLN 178 NE2 65 1 Y 1 B LYS 43 ? CG ? B LYS 16 CG 66 1 Y 1 B LYS 43 ? CD ? B LYS 16 CD 67 1 Y 1 B LYS 43 ? CE ? B LYS 16 CE 68 1 Y 1 B LYS 43 ? NZ ? B LYS 16 NZ 69 1 Y 1 B LYS 61 ? CG ? B LYS 34 CG 70 1 Y 1 B LYS 61 ? CD ? B LYS 34 CD 71 1 Y 1 B LYS 61 ? CE ? B LYS 34 CE 72 1 Y 1 B LYS 61 ? NZ ? B LYS 34 NZ 73 1 Y 1 B LYS 77 ? CG ? B LYS 50 CG 74 1 Y 1 B LYS 77 ? CD ? B LYS 50 CD 75 1 Y 1 B LYS 77 ? CE ? B LYS 50 CE 76 1 Y 1 B LYS 77 ? NZ ? B LYS 50 NZ 77 1 Y 1 B LYS 79 ? CG ? B LYS 52 CG 78 1 Y 1 B LYS 79 ? CD ? B LYS 52 CD 79 1 Y 1 B LYS 79 ? CE ? B LYS 52 CE 80 1 Y 1 B LYS 79 ? NZ ? B LYS 52 NZ 81 1 Y 1 B SER 81 ? OG ? B SER 54 OG 82 1 Y 1 B LYS 88 ? CG ? B LYS 61 CG 83 1 Y 1 B LYS 88 ? CD ? B LYS 61 CD 84 1 Y 1 B LYS 88 ? CE ? B LYS 61 CE 85 1 Y 1 B LYS 88 ? NZ ? B LYS 61 NZ 86 1 Y 1 B ILE 109 ? CG1 ? B ILE 82 CG1 87 1 Y 1 B ILE 109 ? CG2 ? B ILE 82 CG2 88 1 Y 1 B ILE 109 ? CD1 ? B ILE 82 CD1 89 1 Y 1 B SER 110 ? OG ? B SER 83 OG 90 1 Y 1 B GLU 134 ? CG ? B GLU 107 CG 91 1 Y 1 B GLU 134 ? CD ? B GLU 107 CD 92 1 Y 1 B GLU 134 ? OE1 ? B GLU 107 OE1 93 1 Y 1 B GLU 134 ? OE2 ? B GLU 107 OE2 94 1 Y 1 B LYS 136 ? CG ? B LYS 109 CG 95 1 Y 1 B LYS 136 ? CD ? B LYS 109 CD 96 1 Y 1 B LYS 136 ? CE ? B LYS 109 CE 97 1 Y 1 B LYS 136 ? NZ ? B LYS 109 NZ 98 1 Y 1 B LYS 145 ? CG ? B LYS 118 CG 99 1 Y 1 B LYS 145 ? CD ? B LYS 118 CD 100 1 Y 1 B LYS 145 ? CE ? B LYS 118 CE 101 1 Y 1 B LYS 145 ? NZ ? B LYS 118 NZ 102 1 Y 1 B LYS 171 ? CG ? B LYS 144 CG 103 1 Y 1 B LYS 171 ? CD ? B LYS 144 CD 104 1 Y 1 B LYS 171 ? CE ? B LYS 144 CE 105 1 Y 1 B LYS 171 ? NZ ? B LYS 144 NZ 106 1 Y 1 B LYS 174 ? CG ? B LYS 147 CG 107 1 Y 1 B LYS 174 ? CD ? B LYS 147 CD 108 1 Y 1 B LYS 174 ? CE ? B LYS 147 CE 109 1 Y 1 B LYS 174 ? NZ ? B LYS 147 NZ 110 1 Y 1 B GLU 204 ? CG ? B GLU 177 CG 111 1 Y 1 B GLU 204 ? CD ? B GLU 177 CD 112 1 Y 1 B GLU 204 ? OE1 ? B GLU 177 OE1 113 1 Y 1 B GLU 204 ? OE2 ? B GLU 177 OE2 114 1 Y 1 B GLN 205 ? CG ? B GLN 178 CG 115 1 Y 1 B GLN 205 ? CD ? B GLN 178 CD 116 1 Y 1 B GLN 205 ? OE1 ? B GLN 178 OE1 117 1 Y 1 B GLN 205 ? NE2 ? B GLN 178 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 28 ? A GLY 1 2 1 Y 1 A SER 29 ? A SER 2 3 1 Y 1 A HIS 30 ? A HIS 3 4 1 Y 1 A ASP 31 ? A ASP 4 5 1 Y 1 A SER 32 ? A SER 5 6 1 Y 1 A GLY 33 ? A GLY 6 7 1 Y 1 A ASP 34 ? A ASP 7 8 1 Y 1 A LYS 35 ? A LYS 8 9 1 Y 1 A ILE 36 ? A ILE 9 10 1 Y 1 A THR 37 ? A THR 10 11 1 Y 1 A ALA 38 ? A ALA 11 12 1 Y 1 A THR 39 ? A THR 12 13 1 Y 1 A SER 40 ? A SER 13 14 1 Y 1 A SER 41 ? A SER 14 15 1 Y 1 B GLY 28 ? B GLY 1 16 1 Y 1 B SER 29 ? B SER 2 17 1 Y 1 B HIS 30 ? B HIS 3 18 1 Y 1 B ASP 31 ? B ASP 4 19 1 Y 1 B SER 32 ? B SER 5 20 1 Y 1 B GLY 33 ? B GLY 6 21 1 Y 1 B ASP 34 ? B ASP 7 22 1 Y 1 B LYS 35 ? B LYS 8 23 1 Y 1 B ILE 36 ? B ILE 9 24 1 Y 1 B THR 37 ? B THR 10 25 1 Y 1 B ALA 38 ? B ALA 11 26 1 Y 1 B THR 39 ? B THR 12 27 1 Y 1 B SER 40 ? B SER 13 28 1 Y 1 B SER 41 ? B SER 14 29 1 Y 1 B LEU 42 ? B LEU 15 # _pdbx_audit_support.funding_organization 'Japan Agency for Medical Research and Development (AMED)' _pdbx_audit_support.country Japan _pdbx_audit_support.grant_number JP17am0101001 _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id IOD _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id IOD _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'IODIDE ION' IOD 3 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'light scattering' _pdbx_struct_assembly_auth_evidence.details ? # _space_group.name_H-M_alt 'P 21 21 2' _space_group.name_Hall 'P 2 2ab' _space_group.IT_number 18 _space_group.crystal_system orthorhombic _space_group.id 1 #