HEADER OXIDOREDUCTASE 25-MAY-20 7C7G TITLE CRYSTAL STRUCTURES OF AKR1C3 TERNARY COMPLEX WITH NADP+ AND THE TITLE 2 CHROMENE DERIVATIVE 2J COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALDO-KETO REDUCTASE FAMILY 1 MEMBER C3; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: TRANS-1,2-DIHYDROBENZENE-1,2-DIOL DEHYDROGENASE; COMPND 5 EC: 1.3.1.20; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: AKR1C3, DDH1, HSD17B5, KIAA0119, PGFS; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CANCER, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR K.IRIE,N.TOYOOKA,S.ENDO REVDAT 3 29-NOV-23 7C7G 1 REMARK REVDAT 2 07-OCT-20 7C7G 1 JRNL REVDAT 1 23-SEP-20 7C7G 0 JRNL AUTH S.ENDO,H.OGURI,J.SEGAWA,M.KAWAI,D.HU,S.XIA,T.OKADA,K.IRIE, JRNL AUTH 2 S.FUJII,H.GOUDA,K.IGUCHI,T.MATSUKAWA,N.FUJIMOTO,T.NAKAYAMA, JRNL AUTH 3 N.TOYOOKA,T.MATSUNAGA,A.IKARI JRNL TITL DEVELOPMENT OF NOVEL AKR1C3 INHIBITORS AS NEW POTENTIAL JRNL TITL 2 TREATMENT FOR CASTRATION-RESISTANT PROSTATE CANCER. JRNL REF J.MED.CHEM. V. 63 10396 2020 JRNL REFN ISSN 0022-2623 JRNL PMID 32847363 JRNL DOI 10.1021/ACS.JMEDCHEM.0C00939 REMARK 2 REMARK 2 RESOLUTION. 1.86 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.86 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.30 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 3 NUMBER OF REFLECTIONS : 47898 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.221 REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.265 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.830 REMARK 3 FREE R VALUE TEST SET COUNT : 2322 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.3000 - 4.7900 0.98 2706 157 0.1514 0.1994 REMARK 3 2 4.7900 - 3.8000 0.97 2706 140 0.1522 0.1915 REMARK 3 3 3.8000 - 3.3200 0.97 2681 134 0.1839 0.2379 REMARK 3 4 3.3200 - 3.0200 0.97 2737 143 0.2155 0.2436 REMARK 3 5 3.0200 - 2.8000 0.98 2700 139 0.2322 0.3247 REMARK 3 6 2.8000 - 2.6400 0.97 2713 135 0.2605 0.2935 REMARK 3 7 2.6400 - 2.5000 0.97 2675 125 0.2708 0.3279 REMARK 3 8 2.5000 - 2.3900 0.97 2720 146 0.2785 0.3529 REMARK 3 9 2.3900 - 2.3000 0.97 2719 145 0.2839 0.2938 REMARK 3 10 2.3000 - 2.2200 0.97 2671 128 0.3016 0.3826 REMARK 3 11 2.2200 - 2.1500 0.97 2714 140 0.3037 0.3840 REMARK 3 12 2.1500 - 2.0900 0.97 2664 139 0.2986 0.3217 REMARK 3 13 2.0900 - 2.0400 0.97 2699 148 0.3132 0.3386 REMARK 3 14 2.0400 - 1.9900 0.97 2693 129 0.3193 0.3959 REMARK 3 15 1.9900 - 1.9400 0.97 2685 128 0.3268 0.3932 REMARK 3 16 1.9400 - 1.9000 0.96 2680 125 0.3681 0.3996 REMARK 3 17 1.9000 - 1.8600 0.92 2578 121 0.3873 0.4099 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.361 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.604 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.98 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.74 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 5358 REMARK 3 ANGLE : 1.187 7274 REMARK 3 CHIRALITY : 0.080 784 REMARK 3 PLANARITY : 0.007 927 REMARK 3 DIHEDRAL : 24.989 2025 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7C7G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-MAY-20. REMARK 100 THE DEPOSITION ID IS D_1300017136. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUL-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47898 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.860 REMARK 200 RESOLUTION RANGE LOW (A) : 46.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.07710 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.5400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.86 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.80580 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7C7F REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25-30% (W/V) POLYETHYLENE GLYCOL 3350 REMARK 280 (PEG3350), 200 MM SODIUM ACETATE AND 100 MM CACODYLATE, PH 6.6, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1200 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 SER A 3 REMARK 465 LYS A 4 REMARK 465 ASP A 321 REMARK 465 GLU A 322 REMARK 465 TYR A 323 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 ASP B 2 REMARK 465 SER B 3 REMARK 465 LYS B 4 REMARK 465 HIS B 5 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 564 O HOH A 594 1.84 REMARK 500 OD1 ASN A 57 O HOH A 501 1.86 REMARK 500 CD1 TYR B 196 CD1 LEU B 299 1.86 REMARK 500 NE ARG B 223 O HOH B 501 1.86 REMARK 500 CE1 TYR B 196 CD1 LEU B 299 1.91 REMARK 500 OD1 ASP B 238 CD2 LEU B 299 1.94 REMARK 500 O HOH B 586 O HOH B 618 1.97 REMARK 500 O HOH A 593 O HOH A 630 1.98 REMARK 500 OD2 ASP B 238 CD2 LEU B 299 1.98 REMARK 500 O HIS A 5 O HOH A 502 2.01 REMARK 500 O LEU B 122 O HOH B 502 2.03 REMARK 500 OG SER B 32 O HOH B 503 2.03 REMARK 500 O HOH B 570 O HOH B 631 2.04 REMARK 500 NH1 ARG B 91 O HOH B 504 2.05 REMARK 500 O HOH B 599 O HOH B 642 2.06 REMARK 500 O HOH B 548 O HOH B 618 2.08 REMARK 500 OG SER A 51 O HOH A 501 2.09 REMARK 500 O PHE B 306 O HOH B 505 2.10 REMARK 500 O VAL B 29 O HOH B 506 2.11 REMARK 500 ND2 ASN B 198 O HOH B 507 2.13 REMARK 500 O HOH A 596 O HOH A 617 2.13 REMARK 500 OE1 GLN B 6 O HOH B 508 2.14 REMARK 500 N ARG A 171 O HOH A 503 2.14 REMARK 500 OG SER A 73 O HOH A 504 2.15 REMARK 500 N LYS B 201 O HOH B 509 2.15 REMARK 500 CG ASP B 238 CD2 LEU B 299 2.15 REMARK 500 O2X NAP A 401 O HOH A 505 2.16 REMARK 500 O HOH A 531 O HOH A 566 2.16 REMARK 500 O GLU B 237 O HOH B 510 2.17 REMARK 500 N6A NAP B 401 O HOH B 511 2.19 REMARK 500 OE1 GLU A 100 O HOH A 506 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 586 O HOH B 579 1556 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 SER A 221 CB - CA - C ANGL. DEV. = 14.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 57 13.11 -140.04 REMARK 500 SER A 221 160.47 80.30 REMARK 500 ARG A 250 -159.97 -133.35 REMARK 500 GLN A 282 0.05 -67.09 REMARK 500 ASN B 57 13.09 -142.92 REMARK 500 ASP B 210 33.13 73.69 REMARK 500 SER B 221 172.75 77.74 REMARK 500 ARG B 250 -148.34 -121.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 659 DISTANCE = 6.40 ANGSTROMS REMARK 525 HOH B 655 DISTANCE = 8.37 ANGSTROMS REMARK 525 HOH B 656 DISTANCE = 8.97 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FJR A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAP B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FJR B 402 DBREF 7C7G A 1 323 UNP P42330 AK1C3_HUMAN 1 323 DBREF 7C7G B 1 323 UNP P42330 AK1C3_HUMAN 1 323 SEQADV 7C7G GLY A -1 UNP P42330 EXPRESSION TAG SEQADV 7C7G SER A 0 UNP P42330 EXPRESSION TAG SEQADV 7C7G GLY B -1 UNP P42330 EXPRESSION TAG SEQADV 7C7G SER B 0 UNP P42330 EXPRESSION TAG SEQRES 1 A 325 GLY SER MET ASP SER LYS HIS GLN CYS VAL LYS LEU ASN SEQRES 2 A 325 ASP GLY HIS PHE MET PRO VAL LEU GLY PHE GLY THR TYR SEQRES 3 A 325 ALA PRO PRO GLU VAL PRO ARG SER LYS ALA LEU GLU VAL SEQRES 4 A 325 THR LYS LEU ALA ILE GLU ALA GLY PHE ARG HIS ILE ASP SEQRES 5 A 325 SER ALA HIS LEU TYR ASN ASN GLU GLU GLN VAL GLY LEU SEQRES 6 A 325 ALA ILE ARG SER LYS ILE ALA ASP GLY SER VAL LYS ARG SEQRES 7 A 325 GLU ASP ILE PHE TYR THR SER LYS LEU TRP SER THR PHE SEQRES 8 A 325 HIS ARG PRO GLU LEU VAL ARG PRO ALA LEU GLU ASN SER SEQRES 9 A 325 LEU LYS LYS ALA GLN LEU ASP TYR VAL ASP LEU TYR LEU SEQRES 10 A 325 ILE HIS SER PRO MET SER LEU LYS PRO GLY GLU GLU LEU SEQRES 11 A 325 SER PRO THR ASP GLU ASN GLY LYS VAL ILE PHE ASP ILE SEQRES 12 A 325 VAL ASP LEU CYS THR THR TRP GLU ALA MET GLU LYS CYS SEQRES 13 A 325 LYS ASP ALA GLY LEU ALA LYS SER ILE GLY VAL SER ASN SEQRES 14 A 325 PHE ASN ARG ARG GLN LEU GLU MET ILE LEU ASN LYS PRO SEQRES 15 A 325 GLY LEU LYS TYR LYS PRO VAL CYS ASN GLN VAL GLU CYS SEQRES 16 A 325 HIS PRO TYR PHE ASN ARG SER LYS LEU LEU ASP PHE CYS SEQRES 17 A 325 LYS SER LYS ASP ILE VAL LEU VAL ALA TYR SER ALA LEU SEQRES 18 A 325 GLY SER GLN ARG ASP LYS ARG TRP VAL ASP PRO ASN SER SEQRES 19 A 325 PRO VAL LEU LEU GLU ASP PRO VAL LEU CYS ALA LEU ALA SEQRES 20 A 325 LYS LYS HIS LYS ARG THR PRO ALA LEU ILE ALA LEU ARG SEQRES 21 A 325 TYR GLN LEU GLN ARG GLY VAL VAL VAL LEU ALA LYS SER SEQRES 22 A 325 TYR ASN GLU GLN ARG ILE ARG GLN ASN VAL GLN VAL PHE SEQRES 23 A 325 GLU PHE GLN LEU THR ALA GLU ASP MET LYS ALA ILE ASP SEQRES 24 A 325 GLY LEU ASP ARG ASN LEU HIS TYR PHE ASN SER ASP SER SEQRES 25 A 325 PHE ALA SER HIS PRO ASN TYR PRO TYR SER ASP GLU TYR SEQRES 1 B 325 GLY SER MET ASP SER LYS HIS GLN CYS VAL LYS LEU ASN SEQRES 2 B 325 ASP GLY HIS PHE MET PRO VAL LEU GLY PHE GLY THR TYR SEQRES 3 B 325 ALA PRO PRO GLU VAL PRO ARG SER LYS ALA LEU GLU VAL SEQRES 4 B 325 THR LYS LEU ALA ILE GLU ALA GLY PHE ARG HIS ILE ASP SEQRES 5 B 325 SER ALA HIS LEU TYR ASN ASN GLU GLU GLN VAL GLY LEU SEQRES 6 B 325 ALA ILE ARG SER LYS ILE ALA ASP GLY SER VAL LYS ARG SEQRES 7 B 325 GLU ASP ILE PHE TYR THR SER LYS LEU TRP SER THR PHE SEQRES 8 B 325 HIS ARG PRO GLU LEU VAL ARG PRO ALA LEU GLU ASN SER SEQRES 9 B 325 LEU LYS LYS ALA GLN LEU ASP TYR VAL ASP LEU TYR LEU SEQRES 10 B 325 ILE HIS SER PRO MET SER LEU LYS PRO GLY GLU GLU LEU SEQRES 11 B 325 SER PRO THR ASP GLU ASN GLY LYS VAL ILE PHE ASP ILE SEQRES 12 B 325 VAL ASP LEU CYS THR THR TRP GLU ALA MET GLU LYS CYS SEQRES 13 B 325 LYS ASP ALA GLY LEU ALA LYS SER ILE GLY VAL SER ASN SEQRES 14 B 325 PHE ASN ARG ARG GLN LEU GLU MET ILE LEU ASN LYS PRO SEQRES 15 B 325 GLY LEU LYS TYR LYS PRO VAL CYS ASN GLN VAL GLU CYS SEQRES 16 B 325 HIS PRO TYR PHE ASN ARG SER LYS LEU LEU ASP PHE CYS SEQRES 17 B 325 LYS SER LYS ASP ILE VAL LEU VAL ALA TYR SER ALA LEU SEQRES 18 B 325 GLY SER GLN ARG ASP LYS ARG TRP VAL ASP PRO ASN SER SEQRES 19 B 325 PRO VAL LEU LEU GLU ASP PRO VAL LEU CYS ALA LEU ALA SEQRES 20 B 325 LYS LYS HIS LYS ARG THR PRO ALA LEU ILE ALA LEU ARG SEQRES 21 B 325 TYR GLN LEU GLN ARG GLY VAL VAL VAL LEU ALA LYS SER SEQRES 22 B 325 TYR ASN GLU GLN ARG ILE ARG GLN ASN VAL GLN VAL PHE SEQRES 23 B 325 GLU PHE GLN LEU THR ALA GLU ASP MET LYS ALA ILE ASP SEQRES 24 B 325 GLY LEU ASP ARG ASN LEU HIS TYR PHE ASN SER ASP SER SEQRES 25 B 325 PHE ALA SER HIS PRO ASN TYR PRO TYR SER ASP GLU TYR HET NAP A 401 48 HET FJR A 402 22 HET NAP B 401 48 HET FJR B 402 22 HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETNAM FJR 2-AZANYLIDENE-N-(4-METHYLPHENYL)-8-OXIDANYL-CHROMENE-3- HETNAM 2 FJR CARBOXAMIDE HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE HETSYN FJR 8-HYDROXY-2-IMINO-N-(P-TOLYL)-2H-CHROMENE-3-CARBOXAMIDE FORMUL 3 NAP 2(C21 H28 N7 O17 P3) FORMUL 4 FJR 2(C17 H14 N2 O3) FORMUL 7 HOH *315(H2 O) HELIX 1 AA1 ARG A 31 GLY A 45 1 15 HELIX 2 AA2 ALA A 52 ASN A 56 5 5 HELIX 3 AA3 ASN A 57 ASP A 71 1 15 HELIX 4 AA4 LYS A 75 ILE A 79 5 5 HELIX 5 AA5 TRP A 86 HIS A 90 5 5 HELIX 6 AA6 ARG A 91 GLN A 107 1 17 HELIX 7 AA7 ASP A 143 ALA A 157 1 15 HELIX 8 AA8 ASN A 169 ASN A 178 1 10 HELIX 9 AA9 ARG A 199 ASP A 210 1 12 HELIX 10 AB1 VAL A 234 GLU A 237 5 4 HELIX 11 AB2 ASP A 238 LYS A 249 1 12 HELIX 12 AB3 THR A 251 ARG A 263 1 13 HELIX 13 AB4 ASN A 273 VAL A 281 1 9 HELIX 14 AB5 GLN A 282 GLU A 285 5 4 HELIX 15 AB6 THR A 289 GLY A 298 1 10 HELIX 16 AB7 SER A 308 ALA A 312 5 5 HELIX 17 AB8 ARG B 31 GLY B 45 1 15 HELIX 18 AB9 ALA B 52 ASN B 56 5 5 HELIX 19 AC1 ASN B 57 ASP B 71 1 15 HELIX 20 AC2 LYS B 75 ILE B 79 5 5 HELIX 21 AC3 TRP B 86 HIS B 90 5 5 HELIX 22 AC4 ARG B 91 GLU B 93 5 3 HELIX 23 AC5 LEU B 94 GLN B 107 1 14 HELIX 24 AC6 ASP B 143 ALA B 157 1 15 HELIX 25 AC7 ASN B 169 ASN B 178 1 10 HELIX 26 AC8 HIS B 194 ASN B 198 5 5 HELIX 27 AC9 ARG B 199 ASP B 210 1 12 HELIX 28 AD1 VAL B 234 GLU B 237 5 4 HELIX 29 AD2 ASP B 238 LYS B 249 1 12 HELIX 30 AD3 THR B 251 ARG B 263 1 13 HELIX 31 AD4 ASN B 273 VAL B 281 1 9 HELIX 32 AD5 GLN B 282 PHE B 286 5 5 HELIX 33 AD6 THR B 289 GLY B 298 1 10 HELIX 34 AD7 SER B 308 ALA B 312 5 5 SHEET 1 AA1 2 CYS A 7 LYS A 9 0 SHEET 2 AA1 2 PHE A 15 PRO A 17 -1 O MET A 16 N VAL A 8 SHEET 1 AA2 9 LEU A 19 GLY A 22 0 SHEET 2 AA2 9 HIS A 48 ASP A 50 1 O ASP A 50 N PHE A 21 SHEET 3 AA2 9 PHE A 80 LEU A 85 1 O PHE A 80 N ILE A 49 SHEET 4 AA2 9 VAL A 111 ILE A 116 1 O LEU A 115 N LEU A 85 SHEET 5 AA2 9 ALA A 160 SER A 166 1 O GLY A 164 N TYR A 114 SHEET 6 AA2 9 CYS A 188 GLU A 192 1 O CYS A 188 N VAL A 165 SHEET 7 AA2 9 VAL A 212 TYR A 216 1 O VAL A 212 N ASN A 189 SHEET 8 AA2 9 VAL A 266 LYS A 270 1 O VAL A 266 N ALA A 215 SHEET 9 AA2 9 LEU A 19 GLY A 22 1 N GLY A 20 O VAL A 267 SHEET 1 AA3 2 CYS B 7 LYS B 9 0 SHEET 2 AA3 2 PHE B 15 PRO B 17 -1 O MET B 16 N VAL B 8 SHEET 1 AA4 9 LEU B 19 GLY B 22 0 SHEET 2 AA4 9 HIS B 48 ASP B 50 1 O HIS B 48 N PHE B 21 SHEET 3 AA4 9 PHE B 80 LEU B 85 1 O PHE B 80 N ILE B 49 SHEET 4 AA4 9 VAL B 111 ILE B 116 1 O LEU B 115 N LEU B 85 SHEET 5 AA4 9 ALA B 160 SER B 166 1 O LYS B 161 N VAL B 111 SHEET 6 AA4 9 CYS B 188 GLU B 192 1 O GLN B 190 N VAL B 165 SHEET 7 AA4 9 VAL B 212 TYR B 216 1 O VAL B 214 N VAL B 191 SHEET 8 AA4 9 VAL B 266 LYS B 270 1 O VAL B 266 N ALA B 215 SHEET 9 AA4 9 LEU B 19 GLY B 22 1 N GLY B 20 O VAL B 267 SITE 1 AC1 32 GLY A 22 THR A 23 TYR A 24 ASP A 50 SITE 2 AC1 32 TYR A 55 HIS A 117 SER A 166 ASN A 167 SITE 3 AC1 32 GLN A 190 TYR A 216 SER A 217 ALA A 218 SITE 4 AC1 32 LEU A 219 GLY A 220 SER A 221 GLN A 222 SITE 5 AC1 32 LEU A 236 ALA A 253 LEU A 268 ALA A 269 SITE 6 AC1 32 LYS A 270 SER A 271 TYR A 272 ARG A 276 SITE 7 AC1 32 GLN A 279 ASN A 280 PHE A 306 FJR A 402 SITE 8 AC1 32 HOH A 505 HOH A 529 HOH A 567 HOH A 588 SITE 1 AC2 8 TYR A 55 TRP A 86 HIS A 117 MET A 120 SITE 2 AC2 8 LEU A 122 PHE A 306 PHE A 311 NAP A 401 SITE 1 AC3 29 GLY B 22 THR B 23 TYR B 24 ASP B 50 SITE 2 AC3 29 TYR B 55 SER B 166 ASN B 167 GLN B 190 SITE 3 AC3 29 TYR B 216 SER B 217 ALA B 218 LEU B 219 SITE 4 AC3 29 GLY B 220 SER B 221 GLN B 222 ALA B 253 SITE 5 AC3 29 LEU B 268 ALA B 269 LYS B 270 SER B 271 SITE 6 AC3 29 TYR B 272 ARG B 276 GLN B 279 ASN B 280 SITE 7 AC3 29 PHE B 306 FJR B 402 HOH B 511 HOH B 515 SITE 8 AC3 29 HOH B 545 SITE 1 AC4 9 LEU B 54 TYR B 55 TRP B 86 HIS B 117 SITE 2 AC4 9 MET B 120 LEU B 122 PHE B 306 PHE B 311 SITE 3 AC4 9 NAP B 401 CRYST1 40.121 52.314 76.683 77.25 86.16 77.64 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024925 -0.005462 -0.000528 0.00000 SCALE2 0.000000 0.019569 -0.004238 0.00000 SCALE3 0.000000 0.000000 0.013373 0.00000