HEADER PROTEIN BINDING 25-MAY-20 7C7I TITLE CRYSTAL STRUCTURE OF SHANK3 SPN DOMAIN IN COMPLEX WITH GTP-BOUND TITLE 2 RAP1B(E30D,K31E) COMPND MOL_ID: 1; COMPND 2 MOLECULE: RAS-RELATED PROTEIN RAP-1B; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GTP-BINDING PROTEIN SMG P21B; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: SH3 AND MULTIPLE ANKYRIN REPEAT DOMAINS PROTEIN 3; COMPND 9 CHAIN: C, D; COMPND 10 SYNONYM: SHANK3,PROLINE-RICH SYNAPSE-ASSOCIATED PROTEIN 2,PROSAP2 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RAP1B, OK/SW-CL.11; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606 KEYWDS SHANK3, RAP1B, SPN, RAS, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR L.X.XIAO,L.F.PAN REVDAT 2 29-NOV-23 7C7I 1 REMARK REVDAT 1 05-MAY-21 7C7I 0 JRNL AUTH X.L.XU,J.P.LIU,Y.L.WANG,Y.WANG,X.GONG,L.F.PAN JRNL TITL MECHANISTIC INSIGHTS INTO THE INTERACTIONS OF RAS SUBFAMILY JRNL TITL 2 GTPASES WITH THE SPN DOMAIN OF AUTISM-ASSOCIATED SHANK3. JRNL REF CHIN.J.CHEM. V. 38 1635 2020 JRNL REFN ISSN 1001-604X JRNL DOI 10.1002/CJOC.202000278 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.V.AFONINE,R.W.GROSSE-KUNSTLEVE,N.ECHOLS,J.J.HEADD, REMARK 1 AUTH 2 N.W.MORIARTY,M.MUSTYAKIMOV,T.C.TERWILLIGER,A.URZHUMTSEV, REMARK 1 AUTH 3 P.H.ZWART,P.D.ADAMS REMARK 1 TITL TOWARDS AUTOMATED CRYSTALLOGRAPHIC STRUCTURE REFINEMENT WITH REMARK 1 TITL 2 PHENIX.REFINE. REMARK 1 REF ACTA CRYSTALLOGR. D BIOL. V. 68 352 2012 REMARK 1 REF 2 CRYSTALLOGR. REMARK 1 REFN ESSN 1399-0047 REMARK 1 DOI 10.1107/S0907444912001308 REMARK 1 REFERENCE 2 REMARK 1 AUTH P.D.ADAMS,P.V.AFONINE,G.BUNKOCZI,V.B.CHEN,I.W.DAVIS, REMARK 1 AUTH 2 N.ECHOLS,J.J.HEADD,L.W.HUNG,G.J.KAPRAL,R.W.GROSSE-KUNSTLEVE, REMARK 1 AUTH 3 A.J.MCCOY,N.W.MORIARTY,R.OEFFNER,R.J.READ,D.C.RICHARDSON, REMARK 1 AUTH 4 J.S.RICHARDSON,T.C.TERWILLIGER,P.H.ZWART REMARK 1 TITL PHENIX: A COMPREHENSIVE PYTHON-BASED SYSTEM FOR REMARK 1 TITL 2 MACROMOLECULAR STRUCTURE SOLUTION. REMARK 1 REF ACTA CRYSTALLOGR. D BIOL. V. 66 213 2010 REMARK 1 REF 2 CRYSTALLOGR. REMARK 1 REFN ESSN 1399-0047 REMARK 1 DOI 10.1107/S0907444909052925 REMARK 2 REMARK 2 RESOLUTION. 2.28 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2_3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.28 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.90 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 23555 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.780 REMARK 3 FREE R VALUE TEST SET COUNT : 1125 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.9000 - 4.5500 0.99 3039 159 0.1713 0.2175 REMARK 3 2 4.5500 - 3.6100 0.97 2873 135 0.1351 0.1978 REMARK 3 3 3.6100 - 3.1600 0.98 2861 136 0.1641 0.2503 REMARK 3 4 3.1600 - 2.8700 0.99 2830 151 0.1867 0.2744 REMARK 3 5 2.8700 - 2.6600 0.97 2782 151 0.1941 0.2985 REMARK 3 6 2.6600 - 2.5100 0.98 2805 130 0.1973 0.2984 REMARK 3 7 2.5100 - 2.3800 0.98 2774 145 0.2118 0.3018 REMARK 3 8 2.3800 - 2.2800 0.86 2466 118 0.2079 0.2892 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.259 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.620 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.93 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4183 REMARK 3 ANGLE : 0.970 5671 REMARK 3 CHIRALITY : 0.055 629 REMARK 3 PLANARITY : 0.005 735 REMARK 3 DIHEDRAL : 10.499 2546 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 25 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.4029 -7.2872 -20.4947 REMARK 3 T TENSOR REMARK 3 T11: 0.1710 T22: 0.2383 REMARK 3 T33: 0.1761 T12: -0.0149 REMARK 3 T13: -0.0290 T23: -0.0371 REMARK 3 L TENSOR REMARK 3 L11: 3.4136 L22: 3.3374 REMARK 3 L33: 2.4061 L12: -0.2166 REMARK 3 L13: -0.6394 L23: -0.5282 REMARK 3 S TENSOR REMARK 3 S11: 0.0568 S12: 0.2130 S13: -0.2501 REMARK 3 S21: -0.1378 S22: -0.0047 S23: 0.1456 REMARK 3 S31: 0.0272 S32: -0.2012 S33: -0.0589 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 37 THROUGH 58 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.1583 -12.4318 -23.4357 REMARK 3 T TENSOR REMARK 3 T11: 0.2512 T22: 0.2136 REMARK 3 T33: 0.2515 T12: 0.0307 REMARK 3 T13: -0.0134 T23: -0.0305 REMARK 3 L TENSOR REMARK 3 L11: 8.2032 L22: 1.3630 REMARK 3 L33: 3.0288 L12: 1.0312 REMARK 3 L13: 1.3815 L23: 0.8262 REMARK 3 S TENSOR REMARK 3 S11: -0.0917 S12: 0.1862 S13: -0.7719 REMARK 3 S21: -0.2169 S22: 0.0530 S23: -0.0611 REMARK 3 S31: -0.0900 S32: 0.1092 S33: 0.0233 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 59 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.0742 -20.2832 -15.3604 REMARK 3 T TENSOR REMARK 3 T11: 0.4526 T22: 0.3910 REMARK 3 T33: 0.4759 T12: -0.0528 REMARK 3 T13: 0.0596 T23: 0.0205 REMARK 3 L TENSOR REMARK 3 L11: 3.7775 L22: 2.5713 REMARK 3 L33: 9.2908 L12: -1.1347 REMARK 3 L13: 5.2702 L23: -3.1130 REMARK 3 S TENSOR REMARK 3 S11: 0.0932 S12: -0.9437 S13: -1.2670 REMARK 3 S21: 0.6139 S22: 0.3669 S23: 0.5124 REMARK 3 S31: 0.1231 S32: -1.0423 S33: -0.4782 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 75 THROUGH 120 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.0457 -11.6248 -6.4688 REMARK 3 T TENSOR REMARK 3 T11: 0.1801 T22: 0.1983 REMARK 3 T33: 0.1943 T12: -0.0051 REMARK 3 T13: -0.0177 T23: -0.0049 REMARK 3 L TENSOR REMARK 3 L11: 2.0478 L22: 7.3133 REMARK 3 L33: 2.5428 L12: -2.7545 REMARK 3 L13: -0.6343 L23: -0.0181 REMARK 3 S TENSOR REMARK 3 S11: -0.0747 S12: -0.0850 S13: -0.0943 REMARK 3 S21: 0.1550 S22: 0.1077 S23: 0.1180 REMARK 3 S31: 0.1104 S32: -0.1535 S33: -0.0318 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 121 THROUGH 145 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.0911 -2.7449 -0.8179 REMARK 3 T TENSOR REMARK 3 T11: 0.2322 T22: 0.2782 REMARK 3 T33: 0.2056 T12: 0.0031 REMARK 3 T13: -0.0014 T23: -0.0688 REMARK 3 L TENSOR REMARK 3 L11: 4.8686 L22: 5.3195 REMARK 3 L33: 4.5012 L12: -2.2796 REMARK 3 L13: 0.7162 L23: -0.9068 REMARK 3 S TENSOR REMARK 3 S11: -0.0866 S12: -0.4639 S13: 0.2478 REMARK 3 S21: 0.5206 S22: -0.0310 S23: -0.2486 REMARK 3 S31: -0.0828 S32: -0.1271 S33: 0.1968 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 146 THROUGH 167 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.4106 -5.8029 -14.3809 REMARK 3 T TENSOR REMARK 3 T11: 0.1817 T22: 0.2417 REMARK 3 T33: 0.2072 T12: -0.0427 REMARK 3 T13: -0.0322 T23: -0.0315 REMARK 3 L TENSOR REMARK 3 L11: 2.5018 L22: 5.4912 REMARK 3 L33: 2.3304 L12: -1.6279 REMARK 3 L13: -1.3410 L23: 0.7904 REMARK 3 S TENSOR REMARK 3 S11: 0.0368 S12: 0.0656 S13: -0.1068 REMARK 3 S21: 0.2359 S22: -0.1421 S23: 0.0724 REMARK 3 S31: -0.1598 S32: 0.2759 S33: 0.0954 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.4461 10.2217 -23.6234 REMARK 3 T TENSOR REMARK 3 T11: 0.2496 T22: 0.1556 REMARK 3 T33: 0.1364 T12: 0.0020 REMARK 3 T13: 0.0301 T23: 0.0219 REMARK 3 L TENSOR REMARK 3 L11: 6.8013 L22: 3.4481 REMARK 3 L33: 2.6888 L12: -1.4338 REMARK 3 L13: 1.6641 L23: -0.4441 REMARK 3 S TENSOR REMARK 3 S11: -0.1429 S12: 0.2102 S13: 0.3733 REMARK 3 S21: -0.3737 S22: -0.1126 S23: -0.2432 REMARK 3 S31: -0.1322 S32: 0.0488 S33: 0.2617 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 26 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.7185 1.7049 -23.7426 REMARK 3 T TENSOR REMARK 3 T11: 0.1983 T22: 0.2858 REMARK 3 T33: 0.3517 T12: -0.0130 REMARK 3 T13: 0.0061 T23: -0.0534 REMARK 3 L TENSOR REMARK 3 L11: 7.7248 L22: 5.1041 REMARK 3 L33: 0.5625 L12: 6.2207 REMARK 3 L13: -0.3318 L23: -0.0298 REMARK 3 S TENSOR REMARK 3 S11: -0.0733 S12: 0.2407 S13: -0.8138 REMARK 3 S21: -0.1356 S22: 0.4589 S23: -0.7161 REMARK 3 S31: -0.1995 S32: 0.2284 S33: -0.3421 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 37 THROUGH 58 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.0410 11.0060 -28.3492 REMARK 3 T TENSOR REMARK 3 T11: 0.2414 T22: 0.2811 REMARK 3 T33: 0.2564 T12: 0.0066 REMARK 3 T13: 0.0164 T23: 0.0386 REMARK 3 L TENSOR REMARK 3 L11: 5.6980 L22: 1.6987 REMARK 3 L33: 3.3295 L12: 0.7715 REMARK 3 L13: -0.7714 L23: 0.1911 REMARK 3 S TENSOR REMARK 3 S11: -0.1021 S12: 0.5680 S13: 0.3143 REMARK 3 S21: -0.1210 S22: -0.0312 S23: 0.1383 REMARK 3 S31: 0.1667 S32: -0.2760 S33: 0.1048 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 59 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.4413 21.6873 -24.1165 REMARK 3 T TENSOR REMARK 3 T11: 0.5628 T22: 0.4154 REMARK 3 T33: 0.5118 T12: -0.0921 REMARK 3 T13: 0.0164 T23: 0.0282 REMARK 3 L TENSOR REMARK 3 L11: 4.1536 L22: 7.2076 REMARK 3 L33: 4.5985 L12: -1.2526 REMARK 3 L13: -0.0945 L23: -1.0209 REMARK 3 S TENSOR REMARK 3 S11: 0.3189 S12: 0.4148 S13: 1.2678 REMARK 3 S21: -0.0822 S22: 0.0513 S23: -0.7639 REMARK 3 S31: -0.9096 S32: 0.6802 S33: 0.2032 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 75 THROUGH 120 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.5060 17.1500 -12.6691 REMARK 3 T TENSOR REMARK 3 T11: 0.2542 T22: 0.1839 REMARK 3 T33: 0.2899 T12: -0.0149 REMARK 3 T13: 0.0149 T23: -0.0218 REMARK 3 L TENSOR REMARK 3 L11: 3.1868 L22: 3.7289 REMARK 3 L33: 4.1763 L12: -0.9541 REMARK 3 L13: 1.1124 L23: -0.5433 REMARK 3 S TENSOR REMARK 3 S11: -0.1826 S12: -0.0718 S13: 0.5548 REMARK 3 S21: 0.2471 S22: 0.0163 S23: -0.4759 REMARK 3 S31: -0.6671 S32: 0.1001 S33: 0.0771 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 121 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.4767 9.2400 -1.8764 REMARK 3 T TENSOR REMARK 3 T11: 0.4092 T22: 0.3148 REMARK 3 T33: 0.2854 T12: 0.0351 REMARK 3 T13: -0.0032 T23: -0.0531 REMARK 3 L TENSOR REMARK 3 L11: 4.8391 L22: 3.6232 REMARK 3 L33: 2.1680 L12: -3.8200 REMARK 3 L13: 0.0833 L23: -1.2070 REMARK 3 S TENSOR REMARK 3 S11: -0.4016 S12: -0.4221 S13: -0.1451 REMARK 3 S21: 1.1272 S22: 0.3859 S23: 0.1872 REMARK 3 S31: 0.0809 S32: -0.0810 S33: -0.0265 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 138 THROUGH 167 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.6691 10.5498 -14.7837 REMARK 3 T TENSOR REMARK 3 T11: 0.2367 T22: 0.2143 REMARK 3 T33: 0.1878 T12: 0.0185 REMARK 3 T13: 0.0187 T23: 0.0155 REMARK 3 L TENSOR REMARK 3 L11: 2.6415 L22: 1.5222 REMARK 3 L33: 4.5267 L12: 0.3531 REMARK 3 L13: 0.4269 L23: -0.2666 REMARK 3 S TENSOR REMARK 3 S11: -0.0240 S12: -0.1672 S13: 0.0627 REMARK 3 S21: 0.1160 S22: -0.0920 S23: 0.0139 REMARK 3 S31: -0.2910 S32: -0.4274 S33: 0.0737 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 6 THROUGH 18 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.5323 10.3273 -37.6716 REMARK 3 T TENSOR REMARK 3 T11: 0.2098 T22: 0.2306 REMARK 3 T33: 0.1360 T12: 0.0154 REMARK 3 T13: 0.0233 T23: 0.0387 REMARK 3 L TENSOR REMARK 3 L11: 7.9852 L22: 4.5086 REMARK 3 L33: 4.5120 L12: -2.2157 REMARK 3 L13: -1.0507 L23: 0.7829 REMARK 3 S TENSOR REMARK 3 S11: -0.1545 S12: 0.1195 S13: 0.2272 REMARK 3 S21: -0.0936 S22: 0.0797 S23: -0.1661 REMARK 3 S31: -0.2094 S32: 0.0975 S33: 0.0966 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 19 THROUGH 43 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.0726 5.6119 -38.4177 REMARK 3 T TENSOR REMARK 3 T11: 0.2040 T22: 0.1849 REMARK 3 T33: 0.2108 T12: 0.0061 REMARK 3 T13: -0.0530 T23: -0.0311 REMARK 3 L TENSOR REMARK 3 L11: 6.0471 L22: 3.8361 REMARK 3 L33: 4.6973 L12: -3.7566 REMARK 3 L13: -3.6196 L23: 1.3924 REMARK 3 S TENSOR REMARK 3 S11: 0.1583 S12: -0.2472 S13: -0.2368 REMARK 3 S21: -0.1799 S22: -0.0582 S23: -0.0753 REMARK 3 S31: -0.1887 S32: 0.1907 S33: -0.0799 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 44 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.7059 -0.9003 -42.1778 REMARK 3 T TENSOR REMARK 3 T11: 0.3719 T22: 0.2894 REMARK 3 T33: 0.4454 T12: 0.0134 REMARK 3 T13: -0.0506 T23: 0.0251 REMARK 3 L TENSOR REMARK 3 L11: 6.5849 L22: 2.5750 REMARK 3 L33: 2.7410 L12: 2.8095 REMARK 3 L13: -3.3329 L23: -0.2680 REMARK 3 S TENSOR REMARK 3 S11: -0.1745 S12: 0.2431 S13: -1.0125 REMARK 3 S21: -0.0936 S22: 0.2235 S23: 0.2689 REMARK 3 S31: 0.7178 S32: -0.1000 S33: -0.0593 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 57 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.8032 18.8371 -50.6570 REMARK 3 T TENSOR REMARK 3 T11: 0.3691 T22: 0.2796 REMARK 3 T33: 0.4437 T12: 0.0533 REMARK 3 T13: -0.0606 T23: -0.0081 REMARK 3 L TENSOR REMARK 3 L11: 0.7155 L22: 2.0032 REMARK 3 L33: 1.8364 L12: -2.2378 REMARK 3 L13: -0.1022 L23: -2.0433 REMARK 3 S TENSOR REMARK 3 S11: -0.2328 S12: -0.2496 S13: 0.6569 REMARK 3 S21: -0.4222 S22: 0.1679 S23: -1.2711 REMARK 3 S31: 0.6224 S32: 0.3808 S33: -0.1346 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 67 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.3018 8.2361 -50.0619 REMARK 3 T TENSOR REMARK 3 T11: 0.2560 T22: 0.3890 REMARK 3 T33: 0.2204 T12: 0.0606 REMARK 3 T13: 0.0640 T23: 0.0065 REMARK 3 L TENSOR REMARK 3 L11: 6.1094 L22: 6.4617 REMARK 3 L33: 6.3731 L12: 2.1673 REMARK 3 L13: 3.7705 L23: 0.7180 REMARK 3 S TENSOR REMARK 3 S11: -0.0361 S12: 0.8230 S13: -0.3710 REMARK 3 S21: -0.9297 S22: -0.0796 S23: -0.4743 REMARK 3 S31: 0.0126 S32: 0.9702 S33: 0.1117 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 77 THROUGH 85 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.7497 20.1679 -43.4916 REMARK 3 T TENSOR REMARK 3 T11: 0.6130 T22: 0.3749 REMARK 3 T33: 0.3796 T12: -0.0682 REMARK 3 T13: 0.0416 T23: 0.0629 REMARK 3 L TENSOR REMARK 3 L11: 2.4275 L22: 1.9109 REMARK 3 L33: 5.4776 L12: -1.7883 REMARK 3 L13: -2.7380 L23: 3.2118 REMARK 3 S TENSOR REMARK 3 S11: -0.1915 S12: 0.2776 S13: -0.0334 REMARK 3 S21: -0.1478 S22: 0.0830 S23: 0.1146 REMARK 3 S31: 0.0864 S32: -0.6606 S33: 0.3039 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 86 THROUGH 93 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.0522 8.3417 -44.9776 REMARK 3 T TENSOR REMARK 3 T11: 0.2818 T22: 0.1794 REMARK 3 T33: 0.3782 T12: -0.0180 REMARK 3 T13: 0.0081 T23: 0.0242 REMARK 3 L TENSOR REMARK 3 L11: 2.7289 L22: 6.2644 REMARK 3 L33: 8.7333 L12: 3.7804 REMARK 3 L13: 2.2589 L23: 3.7947 REMARK 3 S TENSOR REMARK 3 S11: -0.1765 S12: 0.5370 S13: 0.1921 REMARK 3 S21: -0.3859 S22: 0.0479 S23: 1.0640 REMARK 3 S31: 0.0724 S32: -0.4248 S33: 0.2800 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 4 THROUGH 26 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.6444 -14.7886 -31.1822 REMARK 3 T TENSOR REMARK 3 T11: 0.2627 T22: 0.1170 REMARK 3 T33: 0.1809 T12: 0.0472 REMARK 3 T13: -0.0307 T23: -0.0269 REMARK 3 L TENSOR REMARK 3 L11: 9.2344 L22: 3.4984 REMARK 3 L33: 6.5139 L12: 1.4647 REMARK 3 L13: 0.2358 L23: 0.1233 REMARK 3 S TENSOR REMARK 3 S11: 0.1475 S12: -0.3817 S13: -0.1229 REMARK 3 S21: -0.1290 S22: -0.2091 S23: 0.0525 REMARK 3 S31: 0.1450 S32: -0.2733 S33: -0.0622 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 27 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.1247 -11.0612 -37.8389 REMARK 3 T TENSOR REMARK 3 T11: 0.2506 T22: 0.2145 REMARK 3 T33: 0.2921 T12: 0.0521 REMARK 3 T13: -0.0116 T23: 0.0135 REMARK 3 L TENSOR REMARK 3 L11: 6.9292 L22: 1.4685 REMARK 3 L33: 4.8030 L12: 0.3147 REMARK 3 L13: 1.4589 L23: 0.7541 REMARK 3 S TENSOR REMARK 3 S11: -0.2761 S12: 0.0019 S13: 0.4483 REMARK 3 S21: -0.5657 S22: -0.1945 S23: 0.1574 REMARK 3 S31: -0.3152 S32: -0.4354 S33: 0.0349 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 43 THROUGH 49 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.4705 -2.9434 -37.1361 REMARK 3 T TENSOR REMARK 3 T11: 0.7854 T22: 0.3547 REMARK 3 T33: 0.7782 T12: -0.1240 REMARK 3 T13: 0.0486 T23: 0.1261 REMARK 3 L TENSOR REMARK 3 L11: 7.6722 L22: 3.2515 REMARK 3 L33: 2.1419 L12: 1.1918 REMARK 3 L13: 3.1451 L23: -0.1353 REMARK 3 S TENSOR REMARK 3 S11: 0.3219 S12: -0.2574 S13: 1.9158 REMARK 3 S21: 0.0601 S22: 0.0211 S23: -0.0832 REMARK 3 S31: -1.9971 S32: 0.7845 S33: -0.1409 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 50 THROUGH 85 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.3747 -21.4630 -40.6030 REMARK 3 T TENSOR REMARK 3 T11: 0.3744 T22: 0.2701 REMARK 3 T33: 0.3955 T12: 0.0818 REMARK 3 T13: -0.1040 T23: -0.0719 REMARK 3 L TENSOR REMARK 3 L11: 7.3465 L22: 2.6112 REMARK 3 L33: 5.7048 L12: 2.6379 REMARK 3 L13: -1.5015 L23: 0.8161 REMARK 3 S TENSOR REMARK 3 S11: 0.0188 S12: 0.5093 S13: -0.6032 REMARK 3 S21: 0.3499 S22: 0.2805 S23: -0.2681 REMARK 3 S31: 0.6727 S32: 0.0166 S33: -0.1292 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 86 THROUGH 94 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.9771 -16.1387 -40.9497 REMARK 3 T TENSOR REMARK 3 T11: 0.3064 T22: 0.3290 REMARK 3 T33: 0.2675 T12: 0.0305 REMARK 3 T13: 0.0041 T23: -0.0813 REMARK 3 L TENSOR REMARK 3 L11: 9.5252 L22: 5.5154 REMARK 3 L33: 9.4445 L12: 2.6623 REMARK 3 L13: -3.2041 L23: -0.5818 REMARK 3 S TENSOR REMARK 3 S11: 0.2487 S12: 0.3488 S13: -0.4177 REMARK 3 S21: -0.2206 S22: 0.0518 S23: -0.5097 REMARK 3 S31: 0.2995 S32: 0.6789 S33: -0.3941 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7C7I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-MAY-20. REMARK 100 THE DEPOSITION ID IS D_1300017103. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-JUN-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97891 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23777 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.280 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 8.800 REMARK 200 R MERGE (I) : 0.15300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.83500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5G4X, 4DXA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14.4% (W/V) PEG 8000, SODIUM REMARK 280 CACODYLATE/HYDROCHLORIC ACID (PH 6.5), 160 MM CALCIUM ACETATE, REMARK 280 20% (V/V) GLYCEROL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.25100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 94.94200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.80950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 94.94200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.25100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 27.80950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 62 REMARK 465 GLU B 62 REMARK 465 MET C 1 REMARK 465 ASP C 2 REMARK 465 GLY C 3 REMARK 465 PRO C 4 REMARK 465 GLY C 5 REMARK 465 ARG C 94 REMARK 465 ARG C 95 REMARK 465 VAL C 96 REMARK 465 TYR C 97 REMARK 465 ALA C 98 REMARK 465 GLN C 99 REMARK 465 MET D 1 REMARK 465 ASP D 2 REMARK 465 GLY D 3 REMARK 465 ARG D 61 REMARK 465 GLY D 62 REMARK 465 ARG D 95 REMARK 465 VAL D 96 REMARK 465 TYR D 97 REMARK 465 ALA D 98 REMARK 465 GLN D 99 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN B 63 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG1 THR A 35 O1G GTP A 201 1.96 REMARK 500 OG SER A 17 O1G GTP A 201 2.03 REMARK 500 OG1 THR B 35 O3G GTP B 201 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD1 ASP C 82 OH TYR C 92 3654 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 36 -64.38 -91.99 REMARK 500 PHE A 64 76.17 -106.64 REMARK 500 LYS A 117 35.48 71.03 REMARK 500 LEU A 120 57.23 -92.79 REMARK 500 TRP A 138 49.51 -78.19 REMARK 500 VAL A 154 -61.93 -91.02 REMARK 500 GLU B 37 117.46 -168.86 REMARK 500 PHE B 64 73.66 61.08 REMARK 500 ASP B 105 -0.02 69.66 REMARK 500 LYS B 117 36.98 72.09 REMARK 500 ASN C 44 -110.68 48.31 REMARK 500 LYS D 66 151.34 175.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 203 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 33 O REMARK 620 2 GTP A 201 O1G 104.8 REMARK 620 3 GTP A 201 O3G 107.2 54.3 REMARK 620 4 GTP A 201 O1A 131.8 117.4 115.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 202 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 155 OD1 REMARK 620 2 GLU A 156 OE1 70.2 REMARK 620 3 GLU A 156 OE2 91.1 52.0 REMARK 620 4 HOH A 337 O 80.0 80.3 131.2 REMARK 620 5 ASN B 155 OD1 100.1 157.6 150.3 78.1 REMARK 620 6 GLU B 156 OE1 156.2 124.0 85.9 119.2 72.7 REMARK 620 7 GLU B 156 OE2 151.7 86.6 86.7 80.4 95.5 51.7 REMARK 620 8 HOH B 332 O 71.6 112.8 76.2 141.2 81.4 84.8 134.5 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 33 O REMARK 620 2 GTP B 201 O3G 105.1 REMARK 620 3 GTP B 201 O2A 131.5 123.4 REMARK 620 4 HOH B 317 O 85.2 139.0 57.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GTP A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GTP B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 202 DBREF 7C7I A 1 167 UNP P61224 RAP1B_HUMAN 1 167 DBREF 7C7I B 1 167 UNP P61224 RAP1B_HUMAN 1 167 DBREF 7C7I C 1 99 UNP Q9BYB0 SHAN3_HUMAN 1 99 DBREF 7C7I D 1 99 UNP Q9BYB0 SHAN3_HUMAN 1 99 SEQADV 7C7I ASP A 30 UNP P61224 GLU 30 ENGINEERED MUTATION SEQADV 7C7I GLU A 31 UNP P61224 LYS 31 ENGINEERED MUTATION SEQADV 7C7I ASP B 30 UNP P61224 GLU 30 ENGINEERED MUTATION SEQADV 7C7I GLU B 31 UNP P61224 LYS 31 ENGINEERED MUTATION SEQRES 1 A 167 MET ARG GLU TYR LYS LEU VAL VAL LEU GLY SER GLY GLY SEQRES 2 A 167 VAL GLY LYS SER ALA LEU THR VAL GLN PHE VAL GLN GLY SEQRES 3 A 167 ILE PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SER SEQRES 4 A 167 TYR ARG LYS GLN VAL GLU VAL ASP ALA GLN GLN CYS MET SEQRES 5 A 167 LEU GLU ILE LEU ASP THR ALA GLY THR GLU GLN PHE THR SEQRES 6 A 167 ALA MET ARG ASP LEU TYR MET LYS ASN GLY GLN GLY PHE SEQRES 7 A 167 ALA LEU VAL TYR SER ILE THR ALA GLN SER THR PHE ASN SEQRES 8 A 167 ASP LEU GLN ASP LEU ARG GLU GLN ILE LEU ARG VAL LYS SEQRES 9 A 167 ASP THR ASP ASP VAL PRO MET ILE LEU VAL GLY ASN LYS SEQRES 10 A 167 CYS ASP LEU GLU ASP GLU ARG VAL VAL GLY LYS GLU GLN SEQRES 11 A 167 GLY GLN ASN LEU ALA ARG GLN TRP ASN ASN CYS ALA PHE SEQRES 12 A 167 LEU GLU SER SER ALA LYS SER LYS ILE ASN VAL ASN GLU SEQRES 13 A 167 ILE PHE TYR ASP LEU VAL ARG GLN ILE ASN ARG SEQRES 1 B 167 MET ARG GLU TYR LYS LEU VAL VAL LEU GLY SER GLY GLY SEQRES 2 B 167 VAL GLY LYS SER ALA LEU THR VAL GLN PHE VAL GLN GLY SEQRES 3 B 167 ILE PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SER SEQRES 4 B 167 TYR ARG LYS GLN VAL GLU VAL ASP ALA GLN GLN CYS MET SEQRES 5 B 167 LEU GLU ILE LEU ASP THR ALA GLY THR GLU GLN PHE THR SEQRES 6 B 167 ALA MET ARG ASP LEU TYR MET LYS ASN GLY GLN GLY PHE SEQRES 7 B 167 ALA LEU VAL TYR SER ILE THR ALA GLN SER THR PHE ASN SEQRES 8 B 167 ASP LEU GLN ASP LEU ARG GLU GLN ILE LEU ARG VAL LYS SEQRES 9 B 167 ASP THR ASP ASP VAL PRO MET ILE LEU VAL GLY ASN LYS SEQRES 10 B 167 CYS ASP LEU GLU ASP GLU ARG VAL VAL GLY LYS GLU GLN SEQRES 11 B 167 GLY GLN ASN LEU ALA ARG GLN TRP ASN ASN CYS ALA PHE SEQRES 12 B 167 LEU GLU SER SER ALA LYS SER LYS ILE ASN VAL ASN GLU SEQRES 13 B 167 ILE PHE TYR ASP LEU VAL ARG GLN ILE ASN ARG SEQRES 1 C 99 MET ASP GLY PRO GLY ALA SER ALA VAL VAL VAL ARG VAL SEQRES 2 C 99 GLY ILE PRO ASP LEU GLN GLN THR LYS CYS LEU ARG LEU SEQRES 3 C 99 ASP PRO ALA ALA PRO VAL TRP ALA ALA LYS GLN ARG VAL SEQRES 4 C 99 LEU CYS ALA LEU ASN HIS SER LEU GLN ASP ALA LEU ASN SEQRES 5 C 99 TYR GLY LEU PHE GLN PRO PRO SER ARG GLY ARG ALA GLY SEQRES 6 C 99 LYS PHE LEU ASP GLU GLU ARG LEU LEU GLN GLU TYR PRO SEQRES 7 C 99 PRO ASN LEU ASP THR PRO LEU PRO TYR LEU GLU PHE ARG SEQRES 8 C 99 TYR LYS ARG ARG VAL TYR ALA GLN SEQRES 1 D 99 MET ASP GLY PRO GLY ALA SER ALA VAL VAL VAL ARG VAL SEQRES 2 D 99 GLY ILE PRO ASP LEU GLN GLN THR LYS CYS LEU ARG LEU SEQRES 3 D 99 ASP PRO ALA ALA PRO VAL TRP ALA ALA LYS GLN ARG VAL SEQRES 4 D 99 LEU CYS ALA LEU ASN HIS SER LEU GLN ASP ALA LEU ASN SEQRES 5 D 99 TYR GLY LEU PHE GLN PRO PRO SER ARG GLY ARG ALA GLY SEQRES 6 D 99 LYS PHE LEU ASP GLU GLU ARG LEU LEU GLN GLU TYR PRO SEQRES 7 D 99 PRO ASN LEU ASP THR PRO LEU PRO TYR LEU GLU PHE ARG SEQRES 8 D 99 TYR LYS ARG ARG VAL TYR ALA GLN HET GTP A 201 32 HET CA A 202 1 HET MG A 203 1 HET GTP B 201 32 HET MG B 202 1 HETNAM GTP GUANOSINE-5'-TRIPHOSPHATE HETNAM CA CALCIUM ION HETNAM MG MAGNESIUM ION FORMUL 5 GTP 2(C10 H16 N5 O14 P3) FORMUL 6 CA CA 2+ FORMUL 7 MG 2(MG 2+) FORMUL 10 HOH *188(H2 O) HELIX 1 AA1 GLY A 15 GLY A 26 1 12 HELIX 2 AA2 PHE A 64 GLY A 75 1 12 HELIX 3 AA3 ALA A 86 ASP A 92 1 7 HELIX 4 AA4 ASP A 92 ASP A 105 1 14 HELIX 5 AA5 LEU A 120 ARG A 124 5 5 HELIX 6 AA6 GLY A 127 TRP A 138 1 12 HELIX 7 AA7 VAL A 154 ARG A 167 1 14 HELIX 8 AA8 GLY B 15 GLY B 26 1 12 HELIX 9 AA9 PHE B 64 GLY B 75 1 12 HELIX 10 AB1 ALA B 86 ASP B 92 1 7 HELIX 11 AB2 ASP B 92 ASP B 105 1 14 HELIX 12 AB3 LEU B 120 ARG B 124 5 5 HELIX 13 AB4 GLY B 127 TRP B 138 1 12 HELIX 14 AB5 VAL B 154 ARG B 167 1 14 HELIX 15 AB6 PRO C 16 LEU C 18 5 3 HELIX 16 AB7 PRO C 31 LEU C 43 1 13 HELIX 17 AB8 ASP C 49 LEU C 51 5 3 HELIX 18 AB9 LEU C 73 TYR C 77 5 5 HELIX 19 AC1 PRO D 31 LEU D 43 1 13 HELIX 20 AC2 ASP D 49 LEU D 51 5 3 HELIX 21 AC3 LEU D 73 TYR D 77 5 5 SHEET 1 AA1 6 GLU A 37 VAL A 46 0 SHEET 2 AA1 6 GLN A 49 THR A 58 -1 O CYS A 51 N VAL A 44 SHEET 3 AA1 6 ARG A 2 LEU A 9 1 N VAL A 8 O LEU A 56 SHEET 4 AA1 6 GLY A 77 SER A 83 1 O ALA A 79 N VAL A 7 SHEET 5 AA1 6 MET A 111 ASN A 116 1 O ASN A 116 N TYR A 82 SHEET 6 AA1 6 ALA A 142 GLU A 145 1 O LEU A 144 N GLY A 115 SHEET 1 AA211 ALA B 142 GLU B 145 0 SHEET 2 AA211 MET B 111 ASN B 116 1 N LEU B 113 O ALA B 142 SHEET 3 AA211 GLY B 77 SER B 83 1 N LEU B 80 O VAL B 114 SHEET 4 AA211 ARG B 2 LEU B 9 1 N VAL B 7 O ALA B 79 SHEET 5 AA211 GLN B 49 THR B 58 1 O GLU B 54 N TYR B 4 SHEET 6 AA211 GLU B 37 VAL B 46 -1 N ASP B 38 O ASP B 57 SHEET 7 AA211 GLN C 20 LEU C 26 -1 O THR C 21 N SER B 39 SHEET 8 AA211 VAL C 9 ILE C 15 -1 N ILE C 15 O GLN C 20 SHEET 9 AA211 TYR C 87 TYR C 92 1 O PHE C 90 N GLY C 14 SHEET 10 AA211 TYR C 53 GLN C 57 -1 N PHE C 56 O GLU C 89 SHEET 11 AA211 LYS C 66 PHE C 67 -1 O LYS C 66 N GLN C 57 SHEET 1 AA3 5 GLN D 20 LEU D 26 0 SHEET 2 AA3 5 VAL D 9 ILE D 15 -1 N VAL D 13 O LYS D 22 SHEET 3 AA3 5 TYR D 87 TYR D 92 1 O PHE D 90 N GLY D 14 SHEET 4 AA3 5 TYR D 53 GLN D 57 -1 N PHE D 56 O GLU D 89 SHEET 5 AA3 5 LYS D 66 PHE D 67 -1 O LYS D 66 N GLN D 57 SSBOND 1 CYS C 41 CYS D 41 1555 1555 2.07 LINK O ASP A 33 MG MG A 203 1555 1555 2.62 LINK OD1 ASN A 155 CA CA A 202 1555 1555 2.41 LINK OE1 GLU A 156 CA CA A 202 1555 1555 2.55 LINK OE2 GLU A 156 CA CA A 202 1555 1555 2.38 LINK O1G GTP A 201 MG MG A 203 1555 1555 2.01 LINK O3G GTP A 201 MG MG A 203 1555 1555 2.96 LINK O1A GTP A 201 MG MG A 203 1555 1555 2.41 LINK CA CA A 202 O HOH A 337 1555 1555 2.68 LINK CA CA A 202 OD1 ASN B 155 1555 1555 2.39 LINK CA CA A 202 OE1 GLU B 156 1555 1555 2.61 LINK CA CA A 202 OE2 GLU B 156 1555 1555 2.41 LINK CA CA A 202 O HOH B 332 1555 1555 2.70 LINK O ASP B 33 MG MG B 202 1555 1555 2.66 LINK O3G GTP B 201 MG MG B 202 1555 1555 1.79 LINK O2A GTP B 201 MG MG B 202 1555 1555 2.45 LINK MG MG B 202 O HOH B 317 1555 1555 3.00 SITE 1 AC1 27 GLY A 12 GLY A 13 VAL A 14 GLY A 15 SITE 2 AC1 27 LYS A 16 SER A 17 ALA A 18 PHE A 28 SITE 3 AC1 27 VAL A 29 ASP A 30 GLU A 31 TYR A 32 SITE 4 AC1 27 ASP A 33 THR A 35 ASP A 57 THR A 58 SITE 5 AC1 27 ASN A 116 LYS A 117 ASP A 119 LEU A 120 SITE 6 AC1 27 SER A 147 ALA A 148 LYS A 149 MG A 203 SITE 7 AC1 27 HOH A 303 HOH A 316 HOH A 325 SITE 1 AC2 6 ASN A 155 GLU A 156 HOH A 337 ASN B 155 SITE 2 AC2 6 GLU B 156 HOH B 332 SITE 1 AC3 5 SER A 17 TYR A 32 ASP A 33 THR A 35 SITE 2 AC3 5 GTP A 201 SITE 1 AC4 26 GLY B 12 GLY B 13 VAL B 14 GLY B 15 SITE 2 AC4 26 LYS B 16 SER B 17 ALA B 18 PHE B 28 SITE 3 AC4 26 VAL B 29 ASP B 30 GLU B 31 TYR B 32 SITE 4 AC4 26 ASP B 33 THR B 35 ASP B 57 THR B 58 SITE 5 AC4 26 ASN B 116 LYS B 117 ASP B 119 LEU B 120 SITE 6 AC4 26 SER B 147 ALA B 148 LYS B 149 MG B 202 SITE 7 AC4 26 HOH B 317 HOH B 326 SITE 1 AC5 5 SER B 17 ASP B 33 THR B 35 GTP B 201 SITE 2 AC5 5 HOH B 317 CRYST1 48.502 55.619 189.884 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020618 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017979 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005266 0.00000