HEADER OXIDOREDUCTASE 28-MAY-20 7C83 TITLE CRYSTAL STRUCTURE OF AN INTEGRAL MEMBRANE STEROID 5-ALPHA-REDUCTASE TITLE 2 PBSRD5A COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PROTEOBACTERIA BACTERIUM; SOURCE 3 ORGANISM_TAXID: 1977087; SOURCE 4 GENE: DCC71_03205; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS STEROID REDUCTASE, NADPH, STEROID 3-OXO-DELTA(4) REDUCTION, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR R.B.REN,Y.F.HAN,Q.J.XIAO,D.DENG REVDAT 4 03-APR-24 7C83 1 REMARK REVDAT 3 27-MAR-24 7C83 1 REMARK REVDAT 2 03-FEB-21 7C83 1 JRNL REVDAT 1 27-JAN-21 7C83 0 JRNL AUTH Y.HAN,Q.ZHUANG,B.SUN,W.LV,S.WANG,Q.XIAO,B.PANG,Y.ZHOU, JRNL AUTH 2 F.WANG,P.CHI,Q.WANG,Z.LI,L.ZHU,F.LI,D.DENG,Y.C.CHIANG,Z.LI, JRNL AUTH 3 R.REN JRNL TITL CRYSTAL STRUCTURE OF STEROID REDUCTASE SRD5A REVEALS JRNL TITL 2 CONSERVED STEROID REDUCTION MECHANISM. JRNL REF NAT COMMUN V. 12 449 2021 JRNL REFN ESSN 2041-1723 JRNL PMID 33469028 JRNL DOI 10.1038/S41467-020-20675-2 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.36 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 22971 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.710 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.3600 - 4.7977 0.99 1597 153 0.2189 0.2633 REMARK 3 2 4.7977 - 3.8176 1.00 1543 147 0.2002 0.2495 REMARK 3 3 3.8176 - 3.3379 1.00 1515 145 0.1696 0.2061 REMARK 3 4 3.3379 - 3.0339 1.00 1511 143 0.1791 0.1872 REMARK 3 5 3.0339 - 2.8172 1.00 1508 144 0.1643 0.1930 REMARK 3 6 2.8172 - 2.6515 1.00 1484 142 0.1719 0.2139 REMARK 3 7 2.6515 - 2.5190 1.00 1499 142 0.1779 0.2311 REMARK 3 8 2.5190 - 2.4096 1.00 1487 142 0.1810 0.2332 REMARK 3 9 2.4096 - 2.3170 0.99 1477 141 0.1926 0.2219 REMARK 3 10 2.3170 - 2.2371 1.00 1463 139 0.1868 0.2354 REMARK 3 11 2.2371 - 2.1673 1.00 1483 142 0.1994 0.2659 REMARK 3 12 2.1673 - 2.1054 0.99 1503 144 0.2167 0.2518 REMARK 3 13 2.1054 - 2.0500 0.99 1451 138 0.2393 0.2839 REMARK 3 14 2.0500 - 2.0001 0.99 1450 138 0.2877 0.3249 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.070 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.99 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 26 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.1579 -23.3539 25.1998 REMARK 3 T TENSOR REMARK 3 T11: 0.7914 T22: 0.2911 REMARK 3 T33: 0.2670 T12: 0.0716 REMARK 3 T13: 0.0572 T23: -0.0136 REMARK 3 L TENSOR REMARK 3 L11: 4.0514 L22: 2.0500 REMARK 3 L33: 0.7807 L12: -3.0276 REMARK 3 L13: -0.1169 L23: 0.8020 REMARK 3 S TENSOR REMARK 3 S11: 0.1416 S12: -0.1572 S13: 0.5259 REMARK 3 S21: 0.6611 S22: -0.1118 S23: -0.4197 REMARK 3 S31: -0.9925 S32: 0.1205 S33: -0.1177 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 27 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.7815 -44.8776 24.0034 REMARK 3 T TENSOR REMARK 3 T11: 0.2349 T22: 0.2781 REMARK 3 T33: 0.2000 T12: 0.0522 REMARK 3 T13: 0.0111 T23: 0.0392 REMARK 3 L TENSOR REMARK 3 L11: 2.0587 L22: 3.1001 REMARK 3 L33: 1.6935 L12: 0.2226 REMARK 3 L13: 0.9026 L23: 0.6442 REMARK 3 S TENSOR REMARK 3 S11: -0.1232 S12: -0.6057 S13: -0.5364 REMARK 3 S21: 0.4157 S22: 0.1982 S23: -0.1149 REMARK 3 S31: 0.4917 S32: 0.0656 S33: -0.0297 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 43 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.4772 -28.0509 8.1435 REMARK 3 T TENSOR REMARK 3 T11: 0.1662 T22: 0.3826 REMARK 3 T33: 0.3286 T12: 0.0490 REMARK 3 T13: 0.0077 T23: 0.1353 REMARK 3 L TENSOR REMARK 3 L11: 1.0190 L22: 1.1728 REMARK 3 L33: 3.2047 L12: 0.0575 REMARK 3 L13: -0.4180 L23: -1.8751 REMARK 3 S TENSOR REMARK 3 S11: -0.0277 S12: 0.2556 S13: 0.2209 REMARK 3 S21: -0.1252 S22: 0.7551 S23: 0.8926 REMARK 3 S31: 0.0840 S32: -0.8294 S33: -0.6034 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 104 THROUGH 169 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.3446 -25.8082 8.7359 REMARK 3 T TENSOR REMARK 3 T11: 0.1861 T22: 0.2226 REMARK 3 T33: 0.1840 T12: 0.0711 REMARK 3 T13: 0.0523 T23: 0.0243 REMARK 3 L TENSOR REMARK 3 L11: 1.1375 L22: 2.9468 REMARK 3 L33: 3.0845 L12: 0.9102 REMARK 3 L13: -0.9177 L23: -2.5915 REMARK 3 S TENSOR REMARK 3 S11: 0.0327 S12: 0.0560 S13: 0.1650 REMARK 3 S21: 0.1090 S22: 0.2134 S23: 0.2278 REMARK 3 S31: -0.0990 S32: -0.2869 S33: -0.2272 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 170 THROUGH 190 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.0807 -49.9348 6.3434 REMARK 3 T TENSOR REMARK 3 T11: 0.6790 T22: 0.2222 REMARK 3 T33: 0.3263 T12: 0.0259 REMARK 3 T13: 0.1238 T23: 0.0348 REMARK 3 L TENSOR REMARK 3 L11: 0.6592 L22: 2.6622 REMARK 3 L33: 3.7580 L12: -1.3039 REMARK 3 L13: 0.3372 L23: -0.1169 REMARK 3 S TENSOR REMARK 3 S11: -0.0659 S12: 0.2071 S13: -0.2482 REMARK 3 S21: -1.1399 S22: -0.1965 S23: -0.3907 REMARK 3 S31: 1.2302 S32: -0.0280 S33: 0.2681 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 191 THROUGH 237 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.7849 -33.3727 14.1868 REMARK 3 T TENSOR REMARK 3 T11: 0.1066 T22: 0.2245 REMARK 3 T33: 0.1600 T12: 0.0160 REMARK 3 T13: -0.0078 T23: 0.0351 REMARK 3 L TENSOR REMARK 3 L11: 2.0092 L22: 5.8591 REMARK 3 L33: 3.3476 L12: -1.1923 REMARK 3 L13: -0.6191 L23: -2.5497 REMARK 3 S TENSOR REMARK 3 S11: -0.0499 S12: -0.1458 S13: -0.0872 REMARK 3 S21: 0.2150 S22: -0.2192 S23: -0.4841 REMARK 3 S31: -0.0066 S32: 0.3525 S33: 0.2636 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 238 THROUGH 253 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.4322 -46.9300 10.7372 REMARK 3 T TENSOR REMARK 3 T11: 0.4450 T22: 0.4849 REMARK 3 T33: 0.4724 T12: 0.1887 REMARK 3 T13: 0.6437 T23: 0.3763 REMARK 3 L TENSOR REMARK 3 L11: 1.8854 L22: 0.6865 REMARK 3 L33: 1.9689 L12: -0.5596 REMARK 3 L13: -0.3367 L23: -0.9013 REMARK 3 S TENSOR REMARK 3 S11: -0.7518 S12: 0.1834 S13: 0.5013 REMARK 3 S21: -0.2275 S22: -0.5015 S23: -0.7357 REMARK 3 S31: 0.8069 S32: 0.8344 S33: 0.4783 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7C83 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 29-MAY-20. REMARK 100 THE DEPOSITION ID IS D_1300017149. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-MAR-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.3 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22993 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 19.365 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.09800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 0.84400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PREDICTED MODEL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 40% PEG 400, 100 MM HEPES PH 7.5, 100 REMARK 280 MM POTASSIUM ACETATE, LIPIDIC CUBIC PHASE, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.52300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.52300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 26.09600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 52.13300 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 26.09600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 52.13300 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 61.52300 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 26.09600 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 52.13300 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 61.52300 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 26.09600 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 52.13300 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 461 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 488 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 103 CG CD CE NZ REMARK 470 ARG A 243 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 244 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 248 -45.24 -139.35 REMARK 500 VAL A 252 -87.44 -118.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 OLC A 304 REMARK 610 OLC A 306 REMARK 610 OLC A 307 REMARK 610 OLC A 309 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NDP A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 309 DBREF1 7C83 A 1 253 UNP A0A3A0FWV3_9PROT DBREF2 7C83 A A0A3A0FWV3 1 253 SEQADV 7C83 ALA A -4 UNP A0A3A0FWV EXPRESSION TAG SEQADV 7C83 GLY A -3 UNP A0A3A0FWV EXPRESSION TAG SEQADV 7C83 SER A -2 UNP A0A3A0FWV EXPRESSION TAG SEQADV 7C83 GLY A -1 UNP A0A3A0FWV EXPRESSION TAG SEQADV 7C83 HIS A 0 UNP A0A3A0FWV EXPRESSION TAG SEQRES 1 A 258 ALA GLY SER GLY HIS MET ASP PRO ASP PHE LEU TYR ARG SEQRES 2 A 258 TRP ALA LEU ILE GLY LEU ALA ALA PHE GLY ALA PHE SER SEQRES 3 A 258 PHE ALA THR LEU PHE PHE VAL PRO ALA PRO TYR GLY ARG SEQRES 4 A 258 HIS GLN ARG GLY GLY TRP GLY PRO THR VAL PRO THR ARG SEQRES 5 A 258 LEU ALA TRP ILE ALA GLN GLU LEU PRO ALA PRO LEU VAL SEQRES 6 A 258 PHE ALA LEU VAL PHE ALA ARG GLY GLU HIS ALA ASP ARG SEQRES 7 A 258 LEU VAL PRO LEU LEU LEU LEU GLY LEU TRP GLN LEU HIS SEQRES 8 A 258 TYR LEU GLN ARG THR PHE VAL PHE PRO LEU LEU MET ARG SEQRES 9 A 258 VAL GLY ALA LYS ARG THR PRO LEU VAL THR ALA LEU LEU SEQRES 10 A 258 ALA PHE VAL PHE ASN CYS VAL ASN GLY ALA ALA ASN ALA SEQRES 11 A 258 TYR ALA ILE THR HIS GLY ALA LEU ARG HIS THR GLU ALA SEQRES 12 A 258 TRP LEU ALA ASP PRO ARG PHE ALA ILE GLY ALA LEU LEU SEQRES 13 A 258 PHE LEU GLY GLY TRP ALA LEU ASN LEU HIS SER ASP ALA SEQRES 14 A 258 ILE LEU ARG ARG LEU ARG ALA PRO GLY GLU THR ARG TYR SEQRES 15 A 258 GLU ILE PRO ARG GLY GLY ALA TYR ARG LEU VAL SER CYS SEQRES 16 A 258 PRO ASN TYR LEU GLY GLU ILE VAL GLU TRP CYS GLY TRP SEQRES 17 A 258 ALA LEU ALA THR TRP THR TYR ALA GLY ALA VAL PHE ALA SEQRES 18 A 258 PHE PHE THR PHE ALA ASN LEU PHE PRO ARG ALA LEU ALA SEQRES 19 A 258 HIS HIS ARG TRP TYR ARG GLU ARG PHE PRO ASP TYR PRO SEQRES 20 A 258 ARG GLU ARG LYS ALA VAL ILE PRO PHE VAL VAL HET NDP A 301 48 HET OLC A 302 25 HET OLC A 303 25 HET OLC A 304 21 HET OLC A 305 25 HET OLC A 306 9 HET OLC A 307 9 HET OLC A 308 25 HET OLC A 309 13 HETNAM NDP NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 2 NDP PHOSPHATE HETNAM OLC (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE HETSYN OLC 1-OLEOYL-R-GLYCEROL FORMUL 2 NDP C21 H30 N7 O17 P3 FORMUL 3 OLC 8(C21 H40 O4) FORMUL 11 HOH *90(H2 O) HELIX 1 AA1 PRO A 3 PHE A 26 1 24 HELIX 2 AA2 TYR A 32 GLN A 36 5 5 HELIX 3 AA3 THR A 46 LEU A 55 1 10 HELIX 4 AA4 LEU A 55 ARG A 67 1 13 HELIX 5 AA5 GLY A 68 ASP A 72 5 5 HELIX 6 AA6 ARG A 73 VAL A 93 1 21 HELIX 7 AA7 VAL A 93 MET A 98 1 6 HELIX 8 AA8 LEU A 107 HIS A 130 1 24 HELIX 9 AA9 THR A 136 ALA A 141 1 6 HELIX 10 AB1 ASP A 142 LEU A 169 1 28 HELIX 11 AB2 GLY A 182 LEU A 187 5 6 HELIX 12 AB3 CYS A 190 TRP A 208 1 19 HELIX 13 AB4 THR A 209 PHE A 238 1 30 SHEET 1 AA1 2 THR A 43 PRO A 45 0 SHEET 2 AA1 2 ARG A 104 PRO A 106 -1 O THR A 105 N VAL A 44 SITE 1 AC1 34 TYR A 32 GLY A 33 ARG A 34 TRP A 50 SITE 2 AC1 34 ARG A 90 PHE A 94 MET A 98 ARG A 99 SITE 3 AC1 34 ASN A 159 ASP A 163 LEU A 166 LEU A 169 SITE 4 AC1 34 ARG A 170 ARG A 176 TYR A 177 GLU A 178 SITE 5 AC1 34 ASN A 192 TYR A 193 GLU A 196 THR A 219 SITE 6 AC1 34 ASN A 222 LEU A 223 ARG A 226 HIS A 230 SITE 7 AC1 34 TYR A 234 OLC A 302 HOH A 409 HOH A 410 SITE 8 AC1 34 HOH A 411 HOH A 433 HOH A 440 HOH A 445 SITE 9 AC1 34 HOH A 446 HOH A 454 SITE 1 AC2 14 SER A 21 THR A 24 VAL A 28 TYR A 32 SITE 2 AC2 14 ALA A 49 TRP A 50 GLN A 53 GLU A 54 SITE 3 AC2 14 ALA A 110 PHE A 116 PHE A 218 ASN A 222 SITE 4 AC2 14 NDP A 301 HOH A 443 SITE 1 AC3 7 GLY A 81 LEU A 88 VAL A 93 LEU A 160 SITE 2 AC3 7 ARG A 167 OLC A 304 OLC A 309 SITE 1 AC4 8 LEU A 97 ARG A 99 ASP A 142 ARG A 167 SITE 2 AC4 8 ALA A 171 OLC A 303 OLC A 305 HOH A 420 SITE 1 AC5 5 VAL A 198 TRP A 208 THR A 209 TYR A 210 SITE 2 AC5 5 OLC A 304 SITE 1 AC6 1 GLY A 154 SITE 1 AC7 2 LEU A 48 PHE A 114 SITE 1 AC8 5 ARG A 47 GLY A 81 LEU A 82 LEU A 140 SITE 2 AC8 5 HOH A 447 SITE 1 AC9 6 TRP A 156 HIS A 161 ALA A 164 ARG A 168 SITE 2 AC9 6 GLU A 178 OLC A 303 CRYST1 52.192 104.266 123.046 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019160 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009591 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008127 0.00000