HEADER FLUORESCENT PROTEIN 09-JUN-20 7CAO TITLE CRYSTAL STRUCTURE OF RED CHROMOPROTEIN FROM OLINDIAS FORMOSA COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHROMOPROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: OLINDIAS FORMOSUS; SOURCE 3 ORGANISM_TAXID: 1495449; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GFP-LIKE PROTEIN, NON-FLUORESCENCE, TRANS-CHROMOPHORE, MONOMERIZED, KEYWDS 2 FLUORESCENT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.NAKASHIMA,L.ZHAI,Y.IKE,T.MATSUDZ,T.NAGAI REVDAT 5 29-NOV-23 7CAO 1 REMARK REVDAT 4 15-NOV-23 7CAO 1 LINK ATOM REVDAT 3 18-MAY-22 7CAO 1 JRNL REVDAT 2 11-MAY-22 7CAO 1 JRNL REVDAT 1 20-APR-22 7CAO 0 JRNL AUTH L.ZHAI,R.NAKASHIMA,H.SHINODA,Y.IKE,T.MATSUDA,T.NAGAI JRNL TITL STRUCTURE-BASED ANALYSIS AND EVOLUTION OF A MONOMERIZED JRNL TITL 2 RED-COLORED CHROMOPROTEIN FROM THE OLINDIAS FORMOSA JRNL TITL 3 JELLYFISH. JRNL REF PROTEIN SCI. V. 31 E4285 2022 JRNL REFN ESSN 1469-896X JRNL PMID 35481635 JRNL DOI 10.1002/PRO.4285 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.57 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 32771 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1725 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.10 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2252 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.27 REMARK 3 BIN R VALUE (WORKING SET) : 0.3560 REMARK 3 BIN FREE R VALUE SET COUNT : 118 REMARK 3 BIN FREE R VALUE : 0.3460 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1768 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 60 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 48.79 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.73000 REMARK 3 B22 (A**2) : -0.73000 REMARK 3 B33 (A**2) : 1.45000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.108 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.104 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.959 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1814 ; 0.016 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 1646 ; 0.035 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2448 ; 2.096 ; 1.663 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3826 ; 2.465 ; 1.592 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 224 ; 7.727 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 86 ;29.429 ;21.977 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 295 ;15.371 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;13.876 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 227 ; 0.095 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2030 ; 0.014 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 395 ; 0.026 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7CAO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1300017286. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUL-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34497 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 49.570 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 9.134 REMARK 200 R MERGE (I) : 0.03900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 31.2900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.17 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.2 REMARK 200 DATA REDUNDANCY IN SHELL : 9.19 REMARK 200 R MERGE FOR SHELL (I) : 0.54000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.650 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3GB3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 77.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, SODIUM CHLORIDE, CITRATE, REMARK 280 PH5.4, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 58.23800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 58.23800 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.72200 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 58.23800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 40.36100 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 58.23800 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 121.08300 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 58.23800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 121.08300 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 58.23800 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 40.36100 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 58.23800 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 58.23800 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 80.72200 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 58.23800 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 58.23800 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 80.72200 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 58.23800 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 121.08300 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 58.23800 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 40.36100 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 58.23800 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 40.36100 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 58.23800 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 121.08300 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 58.23800 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 58.23800 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 80.72200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -34 REMARK 465 ARG A -33 REMARK 465 GLY A -32 REMARK 465 SER A -31 REMARK 465 HIS A -30 REMARK 465 HIS A -29 REMARK 465 HIS A -28 REMARK 465 HIS A -27 REMARK 465 HIS A -26 REMARK 465 HIS A -25 REMARK 465 GLY A -24 REMARK 465 MET A -23 REMARK 465 ALA A -22 REMARK 465 SER A -21 REMARK 465 MET A -20 REMARK 465 THR A -19 REMARK 465 GLY A -18 REMARK 465 GLY A -17 REMARK 465 GLN A -16 REMARK 465 GLN A -15 REMARK 465 MET A -14 REMARK 465 GLY A -13 REMARK 465 ARG A -12 REMARK 465 ASP A -11 REMARK 465 LEU A -10 REMARK 465 TYR A -9 REMARK 465 ASP A -8 REMARK 465 ASP A -7 REMARK 465 ASP A -6 REMARK 465 ASP A -5 REMARK 465 LYS A -4 REMARK 465 ASP A -3 REMARK 465 PRO A -2 REMARK 465 SER A -1 REMARK 465 SER A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 7 150.37 -43.90 REMARK 500 ASN A 220 33.01 -99.92 REMARK 500 REMARK 500 REMARK: NULL DBREF 7CAO A -34 229 PDB 7CAO 7CAO -34 229 SEQRES 1 A 262 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY MET ALA SEQRES 2 A 262 SER MET THR GLY GLY GLN GLN MET GLY ARG ASP LEU TYR SEQRES 3 A 262 ASP ASP ASP ASP LYS ASP PRO SER SER MET ALA LEU PHE SEQRES 4 A 262 ALA LYS PRO MET ASN HIS LYS THR GLU ILE THR GLY GLU SEQRES 5 A 262 PHE ASN GLY LYS CYS PHE LYS VAL VAL GLY HIS GLY SER SEQRES 6 A 262 ALA PRO GLY GLY GLY ASP PHE ARG MET HIS ALA TYR CYS SEQRES 7 A 262 GLU SER GLY THR LEU PRO VAL SER TRP CYS VAL LEU SER SEQRES 8 A 262 PRO SER ILE QYG PHE SER MET PHE THR LYS TYR PRO ASN SEQRES 9 A 262 GLY ILE THR ASN PHE PHE GLN GLU ALA PHE PRO GLU GLY SEQRES 10 A 262 TYR THR LEU ASP ARG VAL MET THR ARG GLU ASN GLY GLY SEQRES 11 A 262 SER VAL VAL SER HIS HIS SER TYR ASP LEU GLY LYS ASP SEQRES 12 A 262 GLY ILE THR ALA LYS VAL SER VAL LYS GLY GLU GLY PHE SEQRES 13 A 262 ASP PRO ASN GLY PRO THR MET THR LYS GLY TYR LEU LYS SEQRES 14 A 262 VAL LEU PRO PHE VAL CYS HIS LEU TYR PRO HIS GLY ALA SEQRES 15 A 262 GLY VAL ARG MET THR SER SER VAL GLY MET VAL LYS THR SEQRES 16 A 262 ASP GLY SER LEU ASP ILE PHE ASN VAL ASP SER ASN TYR SEQRES 17 A 262 GLN PRO VAL GLY SER ARG LYS VAL SER VAL PRO LYS PHE SEQRES 18 A 262 HIS PHE VAL GLN HIS ARG ILE ILE LEU MET LYS ASP LYS SEQRES 19 A 262 SER ASP THR ARG ASP HIS ILE VAL MET ARG GLU ILE ALA SEQRES 20 A 262 VAL ALA GLN ASP PRO ASN GLU ALA GLN SER ALA PHE ARG SEQRES 21 A 262 ILE ALA HET QYG A 60 24 HETNAM QYG {(4E)-2-[(1S)-1,4-DIAMINO-4-OXOBUTYL]-4-[(4- HETNAM 2 QYG HYDROXYPHENYL)METHYLIDENE]-5-OXO-4,5-DIHYDRO-1H- HETNAM 3 QYG IMIDAZOL-1-YL}ACETIC ACID FORMUL 1 QYG C16 H18 N4 O5 FORMUL 2 HOH *60(H2 O) HELIX 1 AA1 ALA A 2 LYS A 6 5 5 HELIX 2 AA2 SER A 51 SER A 56 1 6 HELIX 3 AA3 PRO A 57 ILE A 59 5 3 HELIX 4 AA4 PHE A 63 THR A 67 5 5 HELIX 5 AA5 ASN A 75 ALA A 80 1 6 HELIX 6 AA6 ASP A 218 ALA A 222 5 5 SHEET 1 AA113 TYR A 134 VAL A 137 0 SHEET 2 AA113 GLY A 150 LYS A 161 -1 O VAL A 160 N LYS A 136 SHEET 3 AA113 LEU A 166 PRO A 177 -1 O TYR A 175 N VAL A 151 SHEET 4 AA113 TYR A 85 ARG A 93 -1 N THR A 92 O ASN A 170 SHEET 5 AA113 SER A 98 GLY A 108 -1 O VAL A 99 N MET A 91 SHEET 6 AA113 GLY A 111 GLU A 121 -1 O GLY A 111 N GLY A 108 SHEET 7 AA113 MET A 8 PHE A 18 1 N GLU A 17 O GLY A 120 SHEET 8 AA113 LYS A 21 GLY A 33 -1 O VAL A 25 N ILE A 14 SHEET 9 AA113 ASP A 36 CYS A 43 -1 O HIS A 40 N HIS A 28 SHEET 10 AA113 HIS A 207 GLN A 217 -1 O MET A 210 N MET A 39 SHEET 11 AA113 HIS A 189 MET A 198 -1 N ILE A 196 O ARG A 211 SHEET 12 AA113 PHE A 140 HIS A 147 -1 N LEU A 144 O HIS A 189 SHEET 13 AA113 GLY A 150 LYS A 161 -1 O ARG A 152 N TYR A 145 LINK C ILE A 59 N1 QYG A 60 1555 1555 1.46 LINK C3 QYG A 60 N PHE A 63 1555 1555 1.48 CISPEP 1 PHE A 81 PRO A 82 0 13.21 CRYST1 116.476 116.476 161.444 90.00 90.00 90.00 I 41 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008585 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008585 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006194 0.00000