HEADER OXIDOREDUCTASE 10-JUN-20 7CAX TITLE CRYSTAL STRUCTURE OF BACTERIAL REDUCTASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-OXOACYL-ACP REDUCTASE FABG; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: 3-OXOACYL-ACPREDUCTASE,BETA-KETOACYL-ACP REDUCTASE; COMPND 5 EC: 1.1.1.100; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACINETOBACTER BAUMANNII; SOURCE 3 ORGANISM_TAXID: 470; SOURCE 4 STRAIN: C1; SOURCE 5 GENE: ABAPEQ; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS ROSSMAN FOLD, REDUCTASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.KIM,W.C.LEE REVDAT 2 29-NOV-23 7CAX 1 REMARK REVDAT 1 16-JUN-21 7CAX 0 JRNL AUTH W.C.LEE,S.CHOI,A.JANG,K.SON,Y.KIM JRNL TITL CRYSTAL STRUCTURE OF BACTERIAL REDUCTASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.23 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 3 NUMBER OF REFLECTIONS : 174733 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.180 REMARK 3 FREE R VALUE TEST SET COUNT : 3811 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.2340 - 5.5330 0.97 6346 129 0.1645 0.1615 REMARK 3 2 5.5330 - 4.3936 0.96 6315 140 0.1421 0.1712 REMARK 3 3 4.3936 - 3.8388 0.95 6278 154 0.1425 0.1733 REMARK 3 4 3.8388 - 3.4880 0.96 6288 135 0.1461 0.1464 REMARK 3 5 3.4880 - 3.2382 0.96 6333 142 0.1590 0.1957 REMARK 3 6 3.2382 - 3.0473 0.96 6346 151 0.1609 0.1668 REMARK 3 7 3.0473 - 2.8948 0.96 6258 132 0.1584 0.1711 REMARK 3 8 2.8948 - 2.7688 0.96 6292 135 0.1666 0.1988 REMARK 3 9 2.7688 - 2.6622 0.96 6260 142 0.1716 0.2226 REMARK 3 10 2.6622 - 2.5704 0.96 6269 137 0.1763 0.2297 REMARK 3 11 2.5704 - 2.4900 0.96 6369 159 0.1677 0.2104 REMARK 3 12 2.4900 - 2.4188 0.96 6285 136 0.1656 0.1799 REMARK 3 13 2.4188 - 2.3552 0.96 6406 128 0.1665 0.1876 REMARK 3 14 2.3552 - 2.2977 0.96 6269 161 0.1678 0.2278 REMARK 3 15 2.2977 - 2.2455 0.96 6358 134 0.1819 0.2066 REMARK 3 16 2.2455 - 2.1977 0.97 6313 143 0.1879 0.2058 REMARK 3 17 2.1977 - 2.1538 0.97 6355 133 0.2020 0.2451 REMARK 3 18 2.1538 - 2.1131 0.97 6394 146 0.2031 0.2434 REMARK 3 19 2.1131 - 2.0754 0.97 6374 126 0.2062 0.2475 REMARK 3 20 2.0754 - 2.0402 0.98 6412 161 0.2133 0.2526 REMARK 3 21 2.0402 - 2.0073 0.97 6335 147 0.2183 0.2655 REMARK 3 22 2.0073 - 1.9764 0.97 6463 149 0.2197 0.2612 REMARK 3 23 1.9764 - 1.9473 0.98 6416 115 0.2259 0.2588 REMARK 3 24 1.9473 - 1.9199 0.98 6414 161 0.2474 0.2728 REMARK 3 25 1.9199 - 1.8940 0.98 6488 145 0.2623 0.2866 REMARK 3 26 1.8940 - 1.8694 0.98 6402 142 0.2859 0.2846 REMARK 3 27 1.8694 - 1.8460 0.90 5884 128 0.3214 0.3424 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.950 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.56 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7CAX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1300017295. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 7A (6B, 6C1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 174803 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.846 REMARK 200 RESOLUTION RANGE LOW (A) : 39.234 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 200 DATA REDUNDANCY : 1.902 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.8500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.96 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.1 REMARK 200 DATA REDUNDANCY IN SHELL : 1.88 REMARK 200 R MERGE FOR SHELL (I) : 0.50600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.070 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7CAW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M POTASSIUM SODIUM TARTRATE, 20% REMARK 280 (W/V) PEG 3350, PH 7.4, EVAPORATION, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 45.00900 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 18550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 189 REMARK 465 MET A 190 REMARK 465 VAL A 191 REMARK 465 THR A 192 REMARK 465 ASP A 193 REMARK 465 MET B 190 REMARK 465 VAL B 191 REMARK 465 THR B 192 REMARK 465 ASP B 193 REMARK 465 GLU B 194 REMARK 465 MET C 1 REMARK 465 GLU C 189 REMARK 465 MET C 190 REMARK 465 MET D 1 REMARK 465 VAL D 191 REMARK 465 THR D 192 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS D 173 O HOH D 401 1.96 REMARK 500 OD2 ASP C 193 O HOH C 401 2.09 REMARK 500 O HOH D 403 O HOH D 409 2.09 REMARK 500 O HOH C 402 O HOH C 482 2.12 REMARK 500 OE1 GLU D 72 O HOH D 402 2.13 REMARK 500 OG SER D 111 O HOH D 403 2.14 REMARK 500 OE2 GLU D 72 O HOH D 404 2.15 REMARK 500 O HOH A 417 O HOH A 489 2.15 REMARK 500 O HOH B 564 O HOH B 573 2.17 REMARK 500 O HOH B 529 O HOH B 554 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 495 O HOH C 401 2646 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 131 28.42 -143.66 REMARK 500 SER A 139 -140.33 -100.15 REMARK 500 ASN A 237 14.09 -142.03 REMARK 500 SER B 35 -15.09 -145.06 REMARK 500 LYS B 131 32.74 -143.20 REMARK 500 SER B 139 -136.28 -101.54 REMARK 500 GLN B 150 43.64 -141.29 REMARK 500 ASN B 237 13.43 -141.37 REMARK 500 SER C 139 -137.10 -102.62 REMARK 500 GLN C 150 44.66 -142.55 REMARK 500 ALA C 226 30.34 -89.10 REMARK 500 ASN C 237 15.48 -143.04 REMARK 500 SER D 35 -23.18 -146.53 REMARK 500 HIS D 92 78.18 -150.06 REMARK 500 LYS D 131 28.07 -144.66 REMARK 500 SER D 139 -134.82 -98.57 REMARK 500 GLU D 189 -149.58 -160.44 REMARK 500 ALA D 226 32.36 -84.96 REMARK 500 ASN D 237 15.44 -140.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NDP B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NDP D 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 304 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7CAW RELATED DB: PDB DBREF1 7CAX A 1 241 UNP A0A1K1L6W4_ACIBA DBREF2 7CAX A A0A1K1L6W4 1 241 DBREF1 7CAX B 1 241 UNP A0A1K1L6W4_ACIBA DBREF2 7CAX B A0A1K1L6W4 1 241 DBREF1 7CAX C 1 241 UNP A0A1K1L6W4_ACIBA DBREF2 7CAX C A0A1K1L6W4 1 241 DBREF1 7CAX D 1 241 UNP A0A1K1L6W4_ACIBA DBREF2 7CAX D A0A1K1L6W4 1 241 SEQRES 1 A 241 MET THR ARG ARG ILE LEU VAL THR GLY SER SER ARG GLY SEQRES 2 A 241 ILE GLY LYS ALA ILE ALA LEU GLN LEU ALA LYS ALA GLY SEQRES 3 A 241 PHE ASP VAL THR VAL HIS ALA ARG SER ARG GLN ALA GLU SEQRES 4 A 241 ALA GLU GLN VAL VAL GLN GLU ILE GLN ALA LEU GLY GLN SEQRES 5 A 241 ASN SER HIS TYR LEU MET PHE ASP VAL ASN GLU ARG GLN SEQRES 6 A 241 THR VAL GLN GLN ILE LEU GLU GLN ASP VAL GLU GLN HIS SEQRES 7 A 241 GLY GLY PHE TYR GLY VAL VAL LEU ASN ALA GLY LEU THR SEQRES 8 A 241 HIS ASP GLY ALA PHE PRO ALA LEU THR ASP GLN ASP TRP SEQRES 9 A 241 ASP GLU VAL ILE SER THR SER LEU ASP GLY PHE TYR ASN SEQRES 10 A 241 VAL LEU LYS PRO LEU ILE MET PRO MET ILE HIS LEU ARG SEQRES 11 A 241 LYS GLY GLY ARG ILE VAL THR LEU SER SER VAL SER GLY SEQRES 12 A 241 ILE MET GLY ASN ARG GLY GLN VAL ASN TYR SER ALA ALA SEQRES 13 A 241 LYS ALA GLY LEU ILE GLY ALA THR LYS ALA LEU ALA LEU SEQRES 14 A 241 GLU LEU ALA LYS ARG LYS ILE THR VAL ASN CYS VAL ALA SEQRES 15 A 241 PRO GLY LEU ILE GLU THR GLU MET VAL THR ASP GLU VAL SEQRES 16 A 241 LYS GLU HIS ALA LEU LYS MET ILE PRO LEU GLN ARG MET SEQRES 17 A 241 GLY GLN VAL ASP GLU VAL ALA SER VAL VAL LYS PHE LEU SEQRES 18 A 241 CYS SER ASP GLU ALA SER TYR VAL THR ARG GLN VAL ILE SEQRES 19 A 241 SER VAL ASN GLY GLY LEU ILE SEQRES 1 B 241 MET THR ARG ARG ILE LEU VAL THR GLY SER SER ARG GLY SEQRES 2 B 241 ILE GLY LYS ALA ILE ALA LEU GLN LEU ALA LYS ALA GLY SEQRES 3 B 241 PHE ASP VAL THR VAL HIS ALA ARG SER ARG GLN ALA GLU SEQRES 4 B 241 ALA GLU GLN VAL VAL GLN GLU ILE GLN ALA LEU GLY GLN SEQRES 5 B 241 ASN SER HIS TYR LEU MET PHE ASP VAL ASN GLU ARG GLN SEQRES 6 B 241 THR VAL GLN GLN ILE LEU GLU GLN ASP VAL GLU GLN HIS SEQRES 7 B 241 GLY GLY PHE TYR GLY VAL VAL LEU ASN ALA GLY LEU THR SEQRES 8 B 241 HIS ASP GLY ALA PHE PRO ALA LEU THR ASP GLN ASP TRP SEQRES 9 B 241 ASP GLU VAL ILE SER THR SER LEU ASP GLY PHE TYR ASN SEQRES 10 B 241 VAL LEU LYS PRO LEU ILE MET PRO MET ILE HIS LEU ARG SEQRES 11 B 241 LYS GLY GLY ARG ILE VAL THR LEU SER SER VAL SER GLY SEQRES 12 B 241 ILE MET GLY ASN ARG GLY GLN VAL ASN TYR SER ALA ALA SEQRES 13 B 241 LYS ALA GLY LEU ILE GLY ALA THR LYS ALA LEU ALA LEU SEQRES 14 B 241 GLU LEU ALA LYS ARG LYS ILE THR VAL ASN CYS VAL ALA SEQRES 15 B 241 PRO GLY LEU ILE GLU THR GLU MET VAL THR ASP GLU VAL SEQRES 16 B 241 LYS GLU HIS ALA LEU LYS MET ILE PRO LEU GLN ARG MET SEQRES 17 B 241 GLY GLN VAL ASP GLU VAL ALA SER VAL VAL LYS PHE LEU SEQRES 18 B 241 CYS SER ASP GLU ALA SER TYR VAL THR ARG GLN VAL ILE SEQRES 19 B 241 SER VAL ASN GLY GLY LEU ILE SEQRES 1 C 241 MET THR ARG ARG ILE LEU VAL THR GLY SER SER ARG GLY SEQRES 2 C 241 ILE GLY LYS ALA ILE ALA LEU GLN LEU ALA LYS ALA GLY SEQRES 3 C 241 PHE ASP VAL THR VAL HIS ALA ARG SER ARG GLN ALA GLU SEQRES 4 C 241 ALA GLU GLN VAL VAL GLN GLU ILE GLN ALA LEU GLY GLN SEQRES 5 C 241 ASN SER HIS TYR LEU MET PHE ASP VAL ASN GLU ARG GLN SEQRES 6 C 241 THR VAL GLN GLN ILE LEU GLU GLN ASP VAL GLU GLN HIS SEQRES 7 C 241 GLY GLY PHE TYR GLY VAL VAL LEU ASN ALA GLY LEU THR SEQRES 8 C 241 HIS ASP GLY ALA PHE PRO ALA LEU THR ASP GLN ASP TRP SEQRES 9 C 241 ASP GLU VAL ILE SER THR SER LEU ASP GLY PHE TYR ASN SEQRES 10 C 241 VAL LEU LYS PRO LEU ILE MET PRO MET ILE HIS LEU ARG SEQRES 11 C 241 LYS GLY GLY ARG ILE VAL THR LEU SER SER VAL SER GLY SEQRES 12 C 241 ILE MET GLY ASN ARG GLY GLN VAL ASN TYR SER ALA ALA SEQRES 13 C 241 LYS ALA GLY LEU ILE GLY ALA THR LYS ALA LEU ALA LEU SEQRES 14 C 241 GLU LEU ALA LYS ARG LYS ILE THR VAL ASN CYS VAL ALA SEQRES 15 C 241 PRO GLY LEU ILE GLU THR GLU MET VAL THR ASP GLU VAL SEQRES 16 C 241 LYS GLU HIS ALA LEU LYS MET ILE PRO LEU GLN ARG MET SEQRES 17 C 241 GLY GLN VAL ASP GLU VAL ALA SER VAL VAL LYS PHE LEU SEQRES 18 C 241 CYS SER ASP GLU ALA SER TYR VAL THR ARG GLN VAL ILE SEQRES 19 C 241 SER VAL ASN GLY GLY LEU ILE SEQRES 1 D 241 MET THR ARG ARG ILE LEU VAL THR GLY SER SER ARG GLY SEQRES 2 D 241 ILE GLY LYS ALA ILE ALA LEU GLN LEU ALA LYS ALA GLY SEQRES 3 D 241 PHE ASP VAL THR VAL HIS ALA ARG SER ARG GLN ALA GLU SEQRES 4 D 241 ALA GLU GLN VAL VAL GLN GLU ILE GLN ALA LEU GLY GLN SEQRES 5 D 241 ASN SER HIS TYR LEU MET PHE ASP VAL ASN GLU ARG GLN SEQRES 6 D 241 THR VAL GLN GLN ILE LEU GLU GLN ASP VAL GLU GLN HIS SEQRES 7 D 241 GLY GLY PHE TYR GLY VAL VAL LEU ASN ALA GLY LEU THR SEQRES 8 D 241 HIS ASP GLY ALA PHE PRO ALA LEU THR ASP GLN ASP TRP SEQRES 9 D 241 ASP GLU VAL ILE SER THR SER LEU ASP GLY PHE TYR ASN SEQRES 10 D 241 VAL LEU LYS PRO LEU ILE MET PRO MET ILE HIS LEU ARG SEQRES 11 D 241 LYS GLY GLY ARG ILE VAL THR LEU SER SER VAL SER GLY SEQRES 12 D 241 ILE MET GLY ASN ARG GLY GLN VAL ASN TYR SER ALA ALA SEQRES 13 D 241 LYS ALA GLY LEU ILE GLY ALA THR LYS ALA LEU ALA LEU SEQRES 14 D 241 GLU LEU ALA LYS ARG LYS ILE THR VAL ASN CYS VAL ALA SEQRES 15 D 241 PRO GLY LEU ILE GLU THR GLU MET VAL THR ASP GLU VAL SEQRES 16 D 241 LYS GLU HIS ALA LEU LYS MET ILE PRO LEU GLN ARG MET SEQRES 17 D 241 GLY GLN VAL ASP GLU VAL ALA SER VAL VAL LYS PHE LEU SEQRES 18 D 241 CYS SER ASP GLU ALA SER TYR VAL THR ARG GLN VAL ILE SEQRES 19 D 241 SER VAL ASN GLY GLY LEU ILE HET EDO A 301 4 HET EDO A 302 4 HET NDP B 301 48 HET EDO B 302 4 HET EDO B 303 4 HET EDO B 304 4 HET EDO B 305 4 HET EDO B 306 4 HET EDO B 307 4 HET EDO B 308 4 HET EDO B 309 4 HET EDO C 301 4 HET EDO C 302 4 HET NDP D 301 48 HET EDO D 302 4 HET EDO D 303 4 HET EDO D 304 4 HETNAM EDO 1,2-ETHANEDIOL HETNAM NDP NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 2 NDP PHOSPHATE HETSYN EDO ETHYLENE GLYCOL FORMUL 5 EDO 15(C2 H6 O2) FORMUL 7 NDP 2(C21 H30 N7 O17 P3) FORMUL 22 HOH *577(H2 O) HELIX 1 AA1 ARG A 12 GLY A 26 1 15 HELIX 2 AA2 ARG A 36 LEU A 50 1 15 HELIX 3 AA3 GLU A 63 GLY A 79 1 17 HELIX 4 AA4 ALA A 95 LEU A 99 5 5 HELIX 5 AA5 THR A 100 LYS A 120 1 21 HELIX 6 AA6 LEU A 122 HIS A 128 1 7 HELIX 7 AA7 SER A 140 GLY A 146 1 7 HELIX 8 AA8 GLN A 150 ALA A 172 1 23 HELIX 9 AA9 VAL A 195 ILE A 203 1 9 HELIX 10 AB1 GLN A 210 SER A 223 1 14 HELIX 11 AB2 ASP A 224 SER A 227 5 4 HELIX 12 AB3 ARG B 12 ALA B 25 1 14 HELIX 13 AB4 ARG B 36 LEU B 50 1 15 HELIX 14 AB5 GLU B 63 GLY B 79 1 17 HELIX 15 AB6 ALA B 95 LEU B 99 5 5 HELIX 16 AB7 THR B 100 HIS B 128 1 29 HELIX 17 AB8 SER B 140 GLY B 146 1 7 HELIX 18 AB9 GLN B 150 ALA B 172 1 23 HELIX 19 AC1 LYS B 196 ILE B 203 1 8 HELIX 20 AC2 VAL B 211 SER B 223 1 13 HELIX 21 AC3 ASP B 224 SER B 227 5 4 HELIX 22 AC4 ARG C 12 ALA C 25 1 14 HELIX 23 AC5 ARG C 36 GLY C 51 1 16 HELIX 24 AC6 GLU C 63 GLY C 79 1 17 HELIX 25 AC7 ALA C 95 LEU C 99 5 5 HELIX 26 AC8 THR C 100 LYS C 120 1 21 HELIX 27 AC9 LEU C 122 LEU C 129 1 8 HELIX 28 AD1 SER C 140 GLY C 146 1 7 HELIX 29 AD2 GLN C 150 ALA C 172 1 23 HELIX 30 AD3 THR C 192 ILE C 203 1 12 HELIX 31 AD4 GLN C 210 SER C 223 1 14 HELIX 32 AD5 ASP C 224 SER C 227 5 4 HELIX 33 AD6 ARG D 12 ALA D 25 1 14 HELIX 34 AD7 ARG D 36 LEU D 50 1 15 HELIX 35 AD8 GLU D 63 GLY D 79 1 17 HELIX 36 AD9 ALA D 95 LEU D 99 5 5 HELIX 37 AE1 THR D 100 LYS D 120 1 21 HELIX 38 AE2 LEU D 122 HIS D 128 1 7 HELIX 39 AE3 SER D 140 GLY D 146 1 7 HELIX 40 AE4 GLN D 150 ALA D 172 1 23 HELIX 41 AE5 GLU D 194 ILE D 203 1 10 HELIX 42 AE6 VAL D 211 SER D 223 1 13 HELIX 43 AE7 ASP D 224 SER D 227 5 4 SHEET 1 AA1 7 TYR A 56 MET A 58 0 SHEET 2 AA1 7 ASP A 28 ALA A 33 1 N VAL A 31 O LEU A 57 SHEET 3 AA1 7 ARG A 4 VAL A 7 1 N ILE A 5 O ASP A 28 SHEET 4 AA1 7 GLY A 83 LEU A 86 1 O VAL A 85 N LEU A 6 SHEET 5 AA1 7 GLY A 133 LEU A 138 1 O VAL A 136 N LEU A 86 SHEET 6 AA1 7 ILE A 176 PRO A 183 1 O VAL A 181 N THR A 137 SHEET 7 AA1 7 VAL A 233 VAL A 236 1 O ILE A 234 N CYS A 180 SHEET 1 AA2 7 TYR B 56 MET B 58 0 SHEET 2 AA2 7 ASP B 28 ALA B 33 1 N VAL B 31 O LEU B 57 SHEET 3 AA2 7 ARG B 4 VAL B 7 1 N ILE B 5 O THR B 30 SHEET 4 AA2 7 GLY B 83 LEU B 86 1 O VAL B 85 N LEU B 6 SHEET 5 AA2 7 GLY B 133 LEU B 138 1 O VAL B 136 N LEU B 86 SHEET 6 AA2 7 ILE B 176 PRO B 183 1 O VAL B 181 N THR B 137 SHEET 7 AA2 7 VAL B 233 VAL B 236 1 O ILE B 234 N CYS B 180 SHEET 1 AA3 2 ILE B 186 GLU B 187 0 SHEET 2 AA3 2 GLY B 209 GLN B 210 1 O GLY B 209 N GLU B 187 SHEET 1 AA4 7 TYR C 56 MET C 58 0 SHEET 2 AA4 7 ASP C 28 ALA C 33 1 N VAL C 31 O LEU C 57 SHEET 3 AA4 7 ARG C 4 VAL C 7 1 N ILE C 5 O THR C 30 SHEET 4 AA4 7 GLY C 83 LEU C 86 1 O VAL C 85 N LEU C 6 SHEET 5 AA4 7 GLY C 133 LEU C 138 1 O VAL C 136 N LEU C 86 SHEET 6 AA4 7 ILE C 176 PRO C 183 1 O VAL C 181 N THR C 137 SHEET 7 AA4 7 VAL C 233 VAL C 236 1 O ILE C 234 N CYS C 180 SHEET 1 AA5 7 TYR D 56 MET D 58 0 SHEET 2 AA5 7 ASP D 28 ALA D 33 1 N VAL D 31 O LEU D 57 SHEET 3 AA5 7 ARG D 4 VAL D 7 1 N ILE D 5 O THR D 30 SHEET 4 AA5 7 GLY D 83 LEU D 86 1 O VAL D 85 N LEU D 6 SHEET 5 AA5 7 GLY D 133 LEU D 138 1 O VAL D 136 N LEU D 86 SHEET 6 AA5 7 ILE D 176 PRO D 183 1 O VAL D 181 N THR D 137 SHEET 7 AA5 7 VAL D 233 VAL D 236 1 O ILE D 234 N ALA D 182 SHEET 1 AA6 2 ILE D 186 GLU D 187 0 SHEET 2 AA6 2 GLY D 209 GLN D 210 1 O GLY D 209 N GLU D 187 SITE 1 AC1 5 ARG A 3 ALA A 25 PHE A 27 SER A 223 SITE 2 AC1 5 ASP A 224 SITE 1 AC2 7 GLY A 143 ILE A 144 ALA A 158 HOH A 401 SITE 2 AC2 7 GLY C 143 ALA C 158 ILE C 161 SITE 1 AC3 33 GLY B 9 SER B 11 ARG B 12 ILE B 14 SITE 2 AC3 33 HIS B 32 ALA B 33 ARG B 34 SER B 35 SITE 3 AC3 33 ARG B 36 PHE B 59 ASP B 60 VAL B 61 SITE 4 AC3 33 ASN B 62 ASN B 87 ALA B 88 GLY B 89 SITE 5 AC3 33 SER B 139 TYR B 153 LYS B 157 PRO B 183 SITE 6 AC3 33 GLY B 184 ILE B 186 THR B 188 HOH B 407 SITE 7 AC3 33 HOH B 409 HOH B 423 HOH B 434 HOH B 457 SITE 8 AC3 33 HOH B 465 HOH B 466 HOH B 479 HOH B 494 SITE 9 AC3 33 HOH B 533 SITE 1 AC4 3 THR B 2 ARG B 3 GLY B 26 SITE 1 AC5 7 ARG B 3 ALA B 25 PHE B 27 SER B 223 SITE 2 AC5 7 ASP B 224 GLU B 225 HOH B 440 SITE 1 AC6 6 ASP B 101 HOH B 504 ARG D 64 TYR D 116 SITE 2 AC6 6 LYS D 120 HOH D 427 SITE 1 AC7 5 ASP B 113 HOH B 405 HOH B 546 ILE D 108 SITE 2 AC7 5 ASP D 113 SITE 1 AC8 7 GLY B 143 ALA B 158 ILE B 161 HOH B 427 SITE 2 AC8 7 HOH B 439 GLY D 143 ILE D 161 SITE 1 AC9 5 GLN B 68 TYR B 116 LYS B 120 HOH B 408 SITE 2 AC9 5 ASP D 101 SITE 1 AD1 4 GLU B 41 HIS B 55 TYR B 56 HOH B 464 SITE 1 AD2 4 PRO B 97 HOH B 410 MET D 124 HOH D 451 SITE 1 AD3 2 ARG C 3 GLY C 26 SITE 1 AD4 7 ARG C 3 ALA C 25 PHE C 27 SER C 223 SITE 2 AD4 7 ASP C 224 GLU C 225 HOH C 408 SITE 1 AD5 27 GLY D 9 SER D 11 ARG D 12 ILE D 14 SITE 2 AD5 27 HIS D 32 ALA D 33 ARG D 34 SER D 35 SITE 3 AD5 27 ARG D 36 PHE D 59 ASP D 60 VAL D 61 SITE 4 AD5 27 ASN D 62 ASN D 87 ALA D 88 GLY D 89 SITE 5 AD5 27 SER D 139 SER D 140 TYR D 153 LYS D 157 SITE 6 AD5 27 PRO D 183 GLY D 184 ILE D 186 HOH D 413 SITE 7 AD5 27 HOH D 421 HOH D 474 HOH D 478 SITE 1 AD6 3 GLU D 170 LYS D 173 HOH D 401 SITE 1 AD7 7 ARG D 3 ALA D 25 PHE D 27 SER D 223 SITE 2 AD7 7 ASP D 224 GLU D 225 HOH D 416 SITE 1 AD8 4 THR D 2 ARG D 3 GLY D 26 PHE D 27 CRYST1 61.929 90.018 97.776 90.00 92.68 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016148 0.000000 0.000756 0.00000 SCALE2 0.000000 0.011109 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010239 0.00000