HEADER DE NOVO PROTEIN 11-JUN-20 7CBC TITLE CRYSTAL STRUCTURE OF A DE NOVO DESIGNED SWITCH PROTEIN CAGING A TITLE 2 HEMAGGLUTININ BINDER COMPND MOL_ID: 1; COMPND 2 MOLECULE: DE NOVO DESIGNED SWITCH PROTEIN CAGING A HEMAGGLUTININ COMPND 3 BINDER (SCAGEHA267_1S); COMPND 4 CHAIN: A, B; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: SF FILE CONTAINS FRIEDEL PAIRS. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ARTIFICIAL BIOSENSOR, SIX-HELICAL BUNDLE, DE NOVO PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.LEE,B.-H.OH,D.BAKER REVDAT 3 31-MAR-21 7CBC 1 JRNL REVDAT 2 17-MAR-21 7CBC 1 JRNL REVDAT 1 23-DEC-20 7CBC 0 JRNL AUTH A.QUIJANO-RUBIO,H.W.YEH,J.PARK,H.LEE,R.A.LANGAN,S.E.BOYKEN, JRNL AUTH 2 M.J.LAJOIE,L.CAO,C.M.CHOW,M.C.MIRANDA,J.WI,H.J.HONG, JRNL AUTH 3 L.STEWART,B.H.OH,D.BAKER JRNL TITL DE NOVO DESIGN OF MODULAR AND TUNABLE PROTEIN BIOSENSORS. JRNL REF NATURE V. 591 482 2021 JRNL REFN ESSN 1476-4687 JRNL PMID 33503651 JRNL DOI 10.1038/S41586-021-03258-Z REMARK 2 REMARK 2 RESOLUTION. 1.99 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.99 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.09 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.800 REMARK 3 COMPLETENESS FOR RANGE (%) : 69.7 REMARK 3 NUMBER OF REFLECTIONS : 66108 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.360 REMARK 3 FREE R VALUE TEST SET COUNT : 3544 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.0940 - 5.8158 0.90 3226 187 0.2139 0.2304 REMARK 3 2 5.8158 - 4.6176 0.96 3458 191 0.2086 0.2687 REMARK 3 3 4.6176 - 4.0343 0.92 3313 191 0.1724 0.1901 REMARK 3 4 4.0343 - 3.6656 0.89 3183 183 0.1813 0.2625 REMARK 3 5 3.6656 - 3.4029 0.93 3339 180 0.1935 0.2536 REMARK 3 6 3.4029 - 3.2023 0.93 3329 186 0.2281 0.2785 REMARK 3 7 3.2023 - 3.0420 0.92 3306 182 0.2264 0.3256 REMARK 3 8 3.0420 - 2.9096 0.88 3174 184 0.2364 0.2628 REMARK 3 9 2.9096 - 2.7976 0.83 2971 164 0.2244 0.2685 REMARK 3 10 2.7976 - 2.7011 0.75 2706 155 0.2171 0.2287 REMARK 3 11 2.7011 - 2.6166 0.79 2835 165 0.2181 0.2221 REMARK 3 12 2.6166 - 2.5418 0.76 2730 159 0.2141 0.2244 REMARK 3 13 2.5418 - 2.4749 0.77 2795 152 0.1966 0.2508 REMARK 3 14 2.4749 - 2.4146 0.74 2610 154 0.2078 0.2694 REMARK 3 15 2.4146 - 2.3597 0.69 2530 138 0.2042 0.3417 REMARK 3 16 2.3597 - 2.3095 0.68 2387 139 0.2163 0.2251 REMARK 3 17 2.3095 - 2.2633 0.62 2246 146 0.2228 0.2584 REMARK 3 18 2.2633 - 2.2205 0.59 2108 111 0.2212 0.2351 REMARK 3 19 2.2205 - 2.1809 0.54 1940 101 0.2061 0.2668 REMARK 3 20 2.1809 - 2.1439 0.45 1613 96 0.2204 0.2443 REMARK 3 21 2.1439 - 2.1093 0.45 1659 72 0.2121 0.2761 REMARK 3 22 2.1093 - 2.0769 0.44 1536 95 0.2199 0.2496 REMARK 3 23 2.0769 - 2.0463 0.39 1412 86 0.2430 0.2952 REMARK 3 24 2.0463 - 2.0175 0.35 1293 58 0.2603 0.3180 REMARK 3 25 2.0175 - 1.9903 0.25 865 69 0.2699 0.2706 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.580 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 5056 REMARK 3 ANGLE : 0.905 6756 REMARK 3 CHIRALITY : 0.042 783 REMARK 3 PLANARITY : 0.004 884 REMARK 3 DIHEDRAL : 16.783 3272 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7CBC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1300017311. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-DEC-19 REMARK 200 TEMPERATURE (KELVIN) : 173 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 5C (4A) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66246 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.990 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 78.2 REMARK 200 DATA REDUNDANCY : 2.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.0400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 11% (V/V) ETHANOL, 0.25 M NACL, 0.1 M REMARK 280 TRIS-HCL (PH 8.5), VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 89.49650 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.06350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 89.49650 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 30.06350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG B 316 REMARK 465 PRO B 317 REMARK 465 GLY B 318 REMARK 465 LEU B 319 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 47 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 289 O HOH B 501 1.94 REMARK 500 O HOH A 589 O HOH A 612 1.98 REMARK 500 O HOH A 600 O HOH A 602 1.99 REMARK 500 O HOH B 613 O HOH B 664 2.00 REMARK 500 O HOH B 625 O HOH B 663 2.02 REMARK 500 OD2 ASP B 234 O HOH B 502 2.04 REMARK 500 O HOH A 565 O HOH A 575 2.04 REMARK 500 OE2 GLU B 39 O HOH B 503 2.05 REMARK 500 O ARG B 90 OG SER B 94 2.05 REMARK 500 O HOH A 579 O HOH B 600 2.07 REMARK 500 OE2 GLU B 124 O HOH B 504 2.07 REMARK 500 OE2 GLU B 294 O HOH B 505 2.07 REMARK 500 NH2 ARG B 212 O HOH B 506 2.09 REMARK 500 O HOH A 614 O HOH A 618 2.10 REMARK 500 OE1 GLU B 24 O HOH B 507 2.10 REMARK 500 OE2 GLU B 258 O HOH B 508 2.11 REMARK 500 O HOH B 537 O HOH B 603 2.11 REMARK 500 N THR A 48 O HOH A 501 2.13 REMARK 500 NH1 ARG A 180 O HOH A 502 2.14 REMARK 500 NE2 GLN B 209 O HOH B 509 2.14 REMARK 500 O LEU B 140 O HOH B 510 2.14 REMARK 500 NE ARG A 268 O HOH A 503 2.15 REMARK 500 O ARG B 314 O HOH B 511 2.15 REMARK 500 O HOH B 531 O HOH B 638 2.15 REMARK 500 O HOH A 559 O HOH A 583 2.15 REMARK 500 OE2 GLU A 72 O HOH A 504 2.17 REMARK 500 NZ LYS A 175 O HOH A 505 2.18 REMARK 500 NH1 ARG B 187 O HOH B 512 2.18 REMARK 500 O HOH A 515 O HOH A 607 2.19 REMARK 500 O HOH B 593 O HOH B 690 2.19 REMARK 500 OE1 GLU A 46 O HOH A 506 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 596 O HOH B 514 2555 1.92 REMARK 500 O HOH A 586 O HOH A 592 4546 2.01 REMARK 500 O HOH A 592 O HOH A 605 4556 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 187 NE - CZ - NH1 ANGL. DEV. = -3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 2 140.21 156.53 REMARK 500 GLU A 241 50.88 -95.08 REMARK 500 THR A 243 -75.32 -87.95 REMARK 500 SER B 98 97.86 -69.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EOH A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EOH B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EOH B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EOH B 403 DBREF 7CBC A 1 319 PDB 7CBC 7CBC 1 319 DBREF 7CBC B 1 319 PDB 7CBC 7CBC 1 319 SEQRES 1 A 319 MSE SER GLU LEU ALA ARG LYS LEU LEU GLU ALA SER THR SEQRES 2 A 319 LYS LEU GLN ARG LEU ASN ILE ARG LEU ALA GLU ALA LEU SEQRES 3 A 319 LEU GLU ALA MSE ALA ARG LEU GLN GLU LEU ASN LEU GLU SEQRES 4 A 319 LEU VAL TYR LEU ALA VAL GLU LEU THR ASP PRO LYS ARG SEQRES 5 A 319 ILE ARG ASP GLU ILE LYS GLU VAL LYS ASP LYS SER LYS SEQRES 6 A 319 GLU ILE ILE ARG ARG ALA GLU LYS GLU ILE ASP ASP ALA SEQRES 7 A 319 ALA LYS GLU SER GLU LYS ILE LEU GLU GLU ALA ARG GLU SEQRES 8 A 319 ALA ILE SER GLY SER GLY SER TYR LEU ALA LYS LEU LEU SEQRES 9 A 319 LEU LYS ALA ILE ALA GLU THR GLN ASP LEU ASN LEU ARG SEQRES 10 A 319 ALA ALA LYS ALA PHE LEU GLU ALA ALA ALA LYS LEU GLN SEQRES 11 A 319 GLU LEU ASN ILE ARG ALA VAL GLU LEU LEU VAL LYS LEU SEQRES 12 A 319 TYR ASP PRO ALA THR ILE ARG GLU ALA LEU GLU HIS ALA SEQRES 13 A 319 LYS ARG ARG SER LYS GLU ILE ILE ASP GLU ALA GLU ARG SEQRES 14 A 319 ALA ILE ARG ALA ALA LYS ARG GLU SER GLU ARG ILE ILE SEQRES 15 A 319 GLU GLU ALA ARG ARG LEU ILE GLU LYS GLY SER GLY SER SEQRES 16 A 319 GLY SER GLU LEU ALA ARG GLU LEU LEU ARG ALA HIS ALA SEQRES 17 A 319 GLN LEU GLN ARG LEU ASN LEU GLU LEU LEU ARG GLU LEU SEQRES 18 A 319 LEU ARG ALA LEU ALA GLN LEU GLN GLU LEU ASN LEU ASP SEQRES 19 A 319 LEU LEU ARG LEU ALA SER GLU LEU THR ASP PRO ASP GLU SEQRES 20 A 319 ALA ARG LYS ALA ILE ALA ARG SER LYS ARG GLU SER LYS SEQRES 21 A 319 ARG ILE VAL GLU ASP ALA GLU ARG GLY GLY GLY THR PHE SEQRES 22 A 319 ALA CYS ARG ILE ALA ALA LYS ILE ALA ALA GLU PHE GLY SEQRES 23 A 319 TYR SER GLU GLU GLN ILE LYS GLU LEU LEU LYS ASN ALA SEQRES 24 A 319 GLY CYS SER GLU ASP GLU ALA ARG ASP ALA VAL GLU TYR SEQRES 25 A 319 LEU ARG SER ARG PRO GLY LEU SEQRES 1 B 319 MSE SER GLU LEU ALA ARG LYS LEU LEU GLU ALA SER THR SEQRES 2 B 319 LYS LEU GLN ARG LEU ASN ILE ARG LEU ALA GLU ALA LEU SEQRES 3 B 319 LEU GLU ALA MSE ALA ARG LEU GLN GLU LEU ASN LEU GLU SEQRES 4 B 319 LEU VAL TYR LEU ALA VAL GLU LEU THR ASP PRO LYS ARG SEQRES 5 B 319 ILE ARG ASP GLU ILE LYS GLU VAL LYS ASP LYS SER LYS SEQRES 6 B 319 GLU ILE ILE ARG ARG ALA GLU LYS GLU ILE ASP ASP ALA SEQRES 7 B 319 ALA LYS GLU SER GLU LYS ILE LEU GLU GLU ALA ARG GLU SEQRES 8 B 319 ALA ILE SER GLY SER GLY SER TYR LEU ALA LYS LEU LEU SEQRES 9 B 319 LEU LYS ALA ILE ALA GLU THR GLN ASP LEU ASN LEU ARG SEQRES 10 B 319 ALA ALA LYS ALA PHE LEU GLU ALA ALA ALA LYS LEU GLN SEQRES 11 B 319 GLU LEU ASN ILE ARG ALA VAL GLU LEU LEU VAL LYS LEU SEQRES 12 B 319 TYR ASP PRO ALA THR ILE ARG GLU ALA LEU GLU HIS ALA SEQRES 13 B 319 LYS ARG ARG SER LYS GLU ILE ILE ASP GLU ALA GLU ARG SEQRES 14 B 319 ALA ILE ARG ALA ALA LYS ARG GLU SER GLU ARG ILE ILE SEQRES 15 B 319 GLU GLU ALA ARG ARG LEU ILE GLU LYS GLY SER GLY SER SEQRES 16 B 319 GLY SER GLU LEU ALA ARG GLU LEU LEU ARG ALA HIS ALA SEQRES 17 B 319 GLN LEU GLN ARG LEU ASN LEU GLU LEU LEU ARG GLU LEU SEQRES 18 B 319 LEU ARG ALA LEU ALA GLN LEU GLN GLU LEU ASN LEU ASP SEQRES 19 B 319 LEU LEU ARG LEU ALA SER GLU LEU THR ASP PRO ASP GLU SEQRES 20 B 319 ALA ARG LYS ALA ILE ALA ARG SER LYS ARG GLU SER LYS SEQRES 21 B 319 ARG ILE VAL GLU ASP ALA GLU ARG GLY GLY GLY THR PHE SEQRES 22 B 319 ALA CYS ARG ILE ALA ALA LYS ILE ALA ALA GLU PHE GLY SEQRES 23 B 319 TYR SER GLU GLU GLN ILE LYS GLU LEU LEU LYS ASN ALA SEQRES 24 B 319 GLY CYS SER GLU ASP GLU ALA ARG ASP ALA VAL GLU TYR SEQRES 25 B 319 LEU ARG SER ARG PRO GLY LEU HET MSE A 1 8 HET MSE A 30 8 HET MSE B 1 8 HET MSE B 30 8 HET EOH A 401 3 HET EOH B 401 3 HET EOH B 402 3 HET EOH B 403 3 HETNAM MSE SELENOMETHIONINE HETNAM EOH ETHANOL FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 EOH 4(C2 H6 O) FORMUL 7 HOH *317(H2 O) HELIX 1 AA1 SER A 2 LEU A 47 1 46 HELIX 2 AA2 ASP A 49 SER A 94 1 46 HELIX 3 AA3 SER A 98 LEU A 143 1 46 HELIX 4 AA4 ASP A 145 LYS A 191 1 47 HELIX 5 AA5 GLY A 194 SER A 240 1 47 HELIX 6 AA6 ASP A 244 GLY A 269 1 26 HELIX 7 AA7 PHE A 273 PHE A 285 1 13 HELIX 8 AA8 SER A 288 ALA A 299 1 12 HELIX 9 AA9 SER A 302 ARG A 316 1 15 HELIX 10 AB1 SER B 2 LEU B 47 1 46 HELIX 11 AB2 ASP B 49 SER B 94 1 46 HELIX 12 AB3 SER B 98 VAL B 141 1 44 HELIX 13 AB4 ASP B 145 LYS B 191 1 47 HELIX 14 AB5 GLY B 194 LEU B 242 1 49 HELIX 15 AB6 ASP B 244 GLY B 269 1 26 HELIX 16 AB7 PHE B 273 PHE B 285 1 13 HELIX 17 AB8 SER B 288 ALA B 299 1 12 HELIX 18 AB9 SER B 302 SER B 315 1 14 SSBOND 1 CYS A 275 CYS A 301 1555 1555 2.06 SSBOND 2 CYS B 275 CYS B 301 1555 1555 2.06 LINK C MSE A 1 N SER A 2 1555 1555 1.34 LINK C ALA A 29 N MSE A 30 1555 1555 1.33 LINK C MSE A 30 N ALA A 31 1555 1555 1.34 LINK C MSE B 1 N SER B 2 1555 1555 1.34 LINK C ALA B 29 N MSE B 30 1555 1555 1.33 LINK C MSE B 30 N ALA B 31 1555 1555 1.34 SITE 1 AC1 4 SER A 12 ILE A 108 LEU A 203 HIS A 207 SITE 1 AC2 5 LEU B 8 SER B 12 ILE B 108 LEU B 203 SITE 2 AC2 5 HIS B 207 SITE 1 AC3 3 ASN B 19 ASN B 214 LEU B 218 SITE 1 AC4 1 GLY B 196 CRYST1 178.993 60.127 71.799 90.00 112.46 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005587 0.000000 0.002310 0.00000 SCALE2 0.000000 0.016631 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015071 0.00000 HETATM 1 N MSE A 1 -11.627 25.295 35.425 1.00 64.97 N HETATM 2 CA MSE A 1 -11.587 26.639 34.852 1.00 64.18 C HETATM 3 C MSE A 1 -11.879 26.607 33.354 1.00 62.77 C HETATM 4 O MSE A 1 -12.412 27.574 32.805 1.00 67.01 O HETATM 5 CB MSE A 1 -10.229 27.291 35.108 1.00 57.69 C HETATM 6 CG MSE A 1 -9.040 26.447 34.667 1.00 55.88 C HETATM 7 SE MSE A 1 -7.406 27.511 34.720 1.00 86.66 SE HETATM 8 CE MSE A 1 -6.058 26.126 34.472 1.00 50.21 C