HEADER HYDROLASE 30-JUN-20 7CG9 TITLE CRYSTAL STRUCTURE OF PILIN-SPECIFIC SORTASE SRTC1 FROM LACTOBACILLUS TITLE 2 RHAMNOSUS GG COMPND MOL_ID: 1; COMPND 2 MOLECULE: CLASS C SORTASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACTOBACILLUS RHAMNOSUS; SOURCE 3 ORGANISM_TAXID: 47715; SOURCE 4 ATCC: ATCC 53103; SOURCE 5 GENE: F8M46_02250; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A(+) KEYWDS PILIN-SPECIFIC SORTASE, CYSTEINE-TRANSPEPTIDASE, PILUS ASSEMBLY, KEYWDS 2 LACTOBACILLAR PILUS, SPACBA PILUS, HYDROLASE, PROBIOTICS EXPDTA X-RAY DIFFRACTION AUTHOR A.K.MEGTA,S.PRATAP,V.KRISHNAN REVDAT 2 29-NOV-23 7CG9 1 REMARK REVDAT 1 02-MAR-22 7CG9 0 JRNL AUTH A.K.MEGTA,S.PRATAP,V.KRISHNAN JRNL TITL CRYSTAL STRUCTURE OF PILIN-SPECIFIC SORTASE SRTC1 FROM JRNL TITL 2 LACTOBACILLUS RHAMNOSUS GG JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.32 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 91.1 REMARK 3 NUMBER OF REFLECTIONS : 12165 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.235 REMARK 3 R VALUE (WORKING SET) : 0.235 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 593 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.11 REMARK 3 REFLECTION IN BIN (WORKING SET) : 381 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 40.98 REMARK 3 BIN R VALUE (WORKING SET) : 0.3250 REMARK 3 BIN FREE R VALUE SET COUNT : 21 REMARK 3 BIN FREE R VALUE : 0.3590 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1469 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 26 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 42.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.28000 REMARK 3 B22 (A**2) : 1.28000 REMARK 3 B33 (A**2) : -2.55000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.251 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.185 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.941 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1513 ; 0.007 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 1396 ; 0.036 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2059 ; 1.469 ; 1.649 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3228 ; 2.328 ; 1.573 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 193 ; 7.590 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 73 ;33.533 ;21.918 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 243 ;14.274 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ; 9.387 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 207 ; 0.061 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1694 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 308 ; 0.009 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 772 ; 3.379 ; 4.886 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 771 ; 3.378 ; 4.881 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 965 ; 5.034 ; 7.306 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 966 ; 5.031 ; 7.313 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 741 ; 4.952 ; 5.386 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 731 ; 4.937 ; 5.342 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1082 ; 7.044 ; 7.804 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 1535 ; 8.700 ;56.979 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 1535 ; 8.700 ;57.018 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.00 REMARK 3 ION PROBE RADIUS : 0.70 REMARK 3 SHRINKAGE RADIUS : 0.70 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 7CG9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-JUL-20. REMARK 100 THE DEPOSITION ID IS D_1300017414. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-FEB-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ELETTRA REMARK 200 BEAMLINE : 11.2C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97800 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12848 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 42.320 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.0 REMARK 200 DATA REDUNDANCY : 21.90 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 31.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 70.5 REMARK 200 DATA REDUNDANCY IN SHELL : 15.30 REMARK 200 R MERGE FOR SHELL (I) : 0.83000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4G1H REMARK 200 REMARK 200 REMARK: THREE-DIMENSIONAL DIAMOND-SHAPED CRYSTALS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LITHIUM SULFATE, 0.1 M TRIS-CL REMARK 280 PH 8.0, 30% (W/V) PEG 4000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 111.09950 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 21.53550 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 21.53550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 55.54975 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 21.53550 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 21.53550 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 166.64925 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 21.53550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 21.53550 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 55.54975 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 21.53550 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 21.53550 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 166.64925 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 111.09950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9610 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 402 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 14 REMARK 465 GLY A 15 REMARK 465 SER A 16 REMARK 465 SER A 17 REMARK 465 HIS A 18 REMARK 465 HIS A 19 REMARK 465 HIS A 20 REMARK 465 HIS A 21 REMARK 465 HIS A 22 REMARK 465 HIS A 23 REMARK 465 SER A 24 REMARK 465 SER A 25 REMARK 465 GLY A 26 REMARK 465 LEU A 27 REMARK 465 VAL A 28 REMARK 465 PRO A 29 REMARK 465 ARG A 30 REMARK 465 GLY A 31 REMARK 465 SER A 32 REMARK 465 HIS A 33 REMARK 465 MET A 34 REMARK 465 ALA A 35 REMARK 465 TYR A 36 REMARK 465 VAL A 37 REMARK 465 SER A 38 REMARK 465 TYR A 39 REMARK 465 GLN A 40 REMARK 465 ASN A 41 REMARK 465 GLN A 42 REMARK 465 GLN A 43 REMARK 465 VAL A 44 REMARK 465 ILE A 45 REMARK 465 ASP A 46 REMARK 465 ARG A 47 REMARK 465 TYR A 48 REMARK 465 ARG A 49 REMARK 465 GLN A 50 REMARK 465 GLN A 51 REMARK 465 GLU A 52 REMARK 465 ALA A 53 REMARK 465 ARG A 54 REMARK 465 LYS A 55 REMARK 465 ASN A 56 REMARK 465 ALA A 249 REMARK 465 SER A 250 REMARK 465 SER A 251 REMARK 465 TRP A 252 REMARK 465 ALA A 253 REMARK 465 VAL A 254 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 58 CG SD CE REMARK 470 LEU A 60 CG CD1 CD2 REMARK 470 ARG A 61 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 62 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 63 CG CD OE1 OE2 REMARK 470 GLN A 78 CG CD OE1 NE2 REMARK 470 GLN A 79 CG CD OE1 NE2 REMARK 470 LYS A 97 CG CD CE NZ REMARK 470 ASP A 143 CG OD1 OD2 REMARK 470 ASN A 188 CG OD1 ND2 REMARK 470 HIS A 189 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 244 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 155 89.39 -150.77 REMARK 500 LEU A 169 -118.93 50.20 REMARK 500 ASN A 188 62.05 -104.58 REMARK 500 ILE A 228 -53.12 -121.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7CFJ RELATED DB: PDB REMARK 900 HOUSEKEEPING SORTASE SRTA FROM LACTOBACILLUS RHAMNOSUS GG DBREF1 7CG9 A 35 254 UNP A0A5P5ZBR6_LACRH DBREF2 7CG9 A A0A5P5ZBR6 35 254 SEQADV 7CG9 MET A 14 UNP A0A5P5ZBR INITIATING METHIONINE SEQADV 7CG9 GLY A 15 UNP A0A5P5ZBR EXPRESSION TAG SEQADV 7CG9 SER A 16 UNP A0A5P5ZBR EXPRESSION TAG SEQADV 7CG9 SER A 17 UNP A0A5P5ZBR EXPRESSION TAG SEQADV 7CG9 HIS A 18 UNP A0A5P5ZBR EXPRESSION TAG SEQADV 7CG9 HIS A 19 UNP A0A5P5ZBR EXPRESSION TAG SEQADV 7CG9 HIS A 20 UNP A0A5P5ZBR EXPRESSION TAG SEQADV 7CG9 HIS A 21 UNP A0A5P5ZBR EXPRESSION TAG SEQADV 7CG9 HIS A 22 UNP A0A5P5ZBR EXPRESSION TAG SEQADV 7CG9 HIS A 23 UNP A0A5P5ZBR EXPRESSION TAG SEQADV 7CG9 SER A 24 UNP A0A5P5ZBR EXPRESSION TAG SEQADV 7CG9 SER A 25 UNP A0A5P5ZBR EXPRESSION TAG SEQADV 7CG9 GLY A 26 UNP A0A5P5ZBR EXPRESSION TAG SEQADV 7CG9 LEU A 27 UNP A0A5P5ZBR EXPRESSION TAG SEQADV 7CG9 VAL A 28 UNP A0A5P5ZBR EXPRESSION TAG SEQADV 7CG9 PRO A 29 UNP A0A5P5ZBR EXPRESSION TAG SEQADV 7CG9 ARG A 30 UNP A0A5P5ZBR EXPRESSION TAG SEQADV 7CG9 GLY A 31 UNP A0A5P5ZBR EXPRESSION TAG SEQADV 7CG9 SER A 32 UNP A0A5P5ZBR EXPRESSION TAG SEQADV 7CG9 HIS A 33 UNP A0A5P5ZBR EXPRESSION TAG SEQADV 7CG9 MET A 34 UNP A0A5P5ZBR EXPRESSION TAG SEQRES 1 A 241 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 241 LEU VAL PRO ARG GLY SER HIS MET ALA TYR VAL SER TYR SEQRES 3 A 241 GLN ASN GLN GLN VAL ILE ASP ARG TYR ARG GLN GLN GLU SEQRES 4 A 241 ALA ARG LYS ASN GLN MET VAL LEU ARG ARG GLU TYR ASN SEQRES 5 A 241 ASP TYR GLN GLN LYS ASN LYS GLN LEU ALA ALA SER GLN SEQRES 6 A 241 GLN VAL PRO GLY VAL ALA SER PHE ASN HIS ALA VAL ASN SEQRES 7 A 241 ASP GLN GLY THR ALA LYS THR ALA ALA LYS ARG ASN GLN SEQRES 8 A 241 GLN ILE LEU THR ARG GLN THR VAL ALA GLN LEU THR ILE SEQRES 9 A 241 PRO LYS ILE GLY LEU SER LEU PRO VAL PHE ASP HIS THR SEQRES 10 A 241 SER ASP TRP LEU LEU GLN PHE GLY ALA CYS LEU LEU ASP SEQRES 11 A 241 GLY THR SER TYR PRO THR GLY GLY LYS ASN THR HIS ALA SEQRES 12 A 241 VAL ILE SER ALA HIS ARG GLY VAL PRO ASN ALA GLU LEU SEQRES 13 A 241 PHE THR ARG VAL PRO ALA LEU LYS LYS GLY ASP LYS PHE SEQRES 14 A 241 PHE ILE SER ILE GLY ASN HIS LYS LEU ALA TYR GLN VAL SEQRES 15 A 241 PHE LYS ARG GLN VAL ILE GLU PRO SER ASP THR ARG GLN SEQRES 16 A 241 LEU ARG ILE VAL PRO GLY GLN ASP LEU VAL THR LEU MET SEQRES 17 A 241 THR CME THR PRO TYR MET ILE ASN SER HIS ARG LEU LEU SEQRES 18 A 241 ILE THR GLY ARG ARG ILE PRO TYR VAL LYS ALA ASP GLU SEQRES 19 A 241 GLU ALA SER SER TRP ALA VAL MODRES 7CG9 CME A 223 CYS MODIFIED RESIDUE HET CME A 223 10 HET SO4 A 301 5 HET SO4 A 302 5 HETNAM CME S,S-(2-HYDROXYETHYL)THIOCYSTEINE HETNAM SO4 SULFATE ION FORMUL 1 CME C5 H11 N O3 S2 FORMUL 2 SO4 2(O4 S 2-) FORMUL 4 HOH *26(H2 O) HELIX 1 AA1 GLN A 57 ALA A 76 1 20 HELIX 2 AA2 GLY A 82 ALA A 96 1 15 HELIX 3 AA3 ASN A 103 GLN A 110 1 8 HELIX 4 AA4 PRO A 118 GLY A 121 5 4 HELIX 5 AA5 TRP A 133 PHE A 137 5 5 HELIX 6 AA6 ARG A 172 LEU A 176 5 5 HELIX 7 AA7 THR A 206 ARG A 210 5 5 HELIX 8 AA8 VAL A 243 GLU A 248 1 6 SHEET 1 AA1 9 THR A 111 ILE A 117 0 SHEET 2 AA1 9 LEU A 122 PHE A 127 -1 O VAL A 126 N ALA A 113 SHEET 3 AA1 9 ALA A 139 LEU A 141 1 O ALA A 139 N PHE A 127 SHEET 4 AA1 9 THR A 154 SER A 159 -1 O SER A 159 N CYS A 140 SHEET 5 AA1 9 ASP A 216 THR A 224 1 O THR A 219 N ILE A 158 SHEET 6 AA1 9 HIS A 231 ILE A 240 -1 O GLY A 237 N VAL A 218 SHEET 7 AA1 9 LYS A 190 ILE A 201 -1 N GLN A 199 O LEU A 234 SHEET 8 AA1 9 LYS A 181 SER A 185 -1 N ILE A 184 O LEU A 191 SHEET 9 AA1 9 THR A 111 ILE A 117 -1 N THR A 116 O PHE A 183 LINK C THR A 222 N CME A 223 1555 1555 1.33 LINK C CME A 223 N THR A 224 1555 1555 1.34 CISPEP 1 THR A 224 PRO A 225 0 -10.03 SITE 1 AC1 6 HIS A 155 LYS A 197 GLN A 199 GLN A 208 SITE 2 AC1 6 LEU A 217 THR A 236 SITE 1 AC2 4 ARG A 162 THR A 224 PRO A 225 TYR A 226 CRYST1 43.071 43.071 222.199 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023217 0.000000 0.000000 0.00000 SCALE2 0.000000 0.023217 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004500 0.00000