HEADER VIRAL PROTEIN 06-JUL-20 7CHP TITLE CRYSTAL STRUCTURE OF SARS-COV-2 ANTIBODY P5A-3C8 WITH RBD COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPIKE PROTEIN S1; COMPND 3 CHAIN: E; COMPND 4 FRAGMENT: RECEPTOR BINDING DOMAIN; COMPND 5 SYNONYM: S GLYCOPROTEIN,E2,PEPLOMER PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ANTIBODY P5A-3C8 HEAVY CHAIN; COMPND 9 CHAIN: H; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: ANTIBODY P5A-3C8 LIGHT CHAIN; COMPND 13 CHAIN: L; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_COMMON: 2019-NCOV; SOURCE 5 ORGANISM_TAXID: 2697049; SOURCE 6 GENE: S, 2; SOURCE 7 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 14 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 16 MOL_ID: 3; SOURCE 17 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 18 ORGANISM_COMMON: HUMAN; SOURCE 19 ORGANISM_TAXID: 9606; SOURCE 20 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 21 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS SPIKE, RECEPTOR BINDING DOMAIN, ANTIBODY, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR X.WANG,L.ZHANG,J.GE,R.WANG,Q.ZHANG REVDAT 4 09-OCT-24 7CHP 1 REMARK REVDAT 3 29-NOV-23 7CHP 1 REMARK REVDAT 2 01-DEC-21 7CHP 1 JRNL REVDAT 1 19-MAY-21 7CHP 0 JRNL AUTH Q.ZHANG,B.JU,J.GE,J.F.CHAN,L.CHENG,R.WANG,W.HUANG,M.FANG, JRNL AUTH 2 P.CHEN,B.ZHOU,S.SONG,S.SHAN,B.YAN,S.ZHANG,X.GE,J.YU,J.ZHAO, JRNL AUTH 3 H.WANG,L.LIU,Q.LV,L.FU,X.SHI,K.Y.YUEN,L.LIU,Y.WANG,Z.CHEN, JRNL AUTH 4 L.ZHANG,X.WANG,Z.ZHANG JRNL TITL POTENT AND PROTECTIVE IGHV3-53/3-66 PUBLIC ANTIBODIES AND JRNL TITL 2 THEIR SHARED ESCAPE MUTANT ON THE SPIKE OF SARS-COV-2. JRNL REF NAT COMMUN V. 12 4210 2021 JRNL REFN ESSN 2041-1723 JRNL PMID 34244522 JRNL DOI 10.1038/S41467-021-24514-W REMARK 2 REMARK 2 RESOLUTION. 2.36 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2_3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.36 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 43617 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.830 REMARK 3 FREE R VALUE TEST SET COUNT : 2106 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 50.9840 - 5.8100 0.99 3016 164 0.1806 0.2006 REMARK 3 2 5.8100 - 4.6125 1.00 2918 142 0.1525 0.1583 REMARK 3 3 4.6125 - 4.0297 1.00 2888 143 0.1479 0.1578 REMARK 3 4 4.0297 - 3.6614 1.00 2825 149 0.1843 0.2097 REMARK 3 5 3.6614 - 3.3990 1.00 2866 139 0.2006 0.2682 REMARK 3 6 3.3990 - 3.1987 1.00 2845 138 0.2114 0.2228 REMARK 3 7 3.1987 - 3.0385 1.00 2831 130 0.2264 0.2309 REMARK 3 8 3.0385 - 2.9062 1.00 2799 145 0.2262 0.2946 REMARK 3 9 2.9062 - 2.7944 1.00 2859 135 0.2228 0.2855 REMARK 3 10 2.7944 - 2.6979 1.00 2811 143 0.2237 0.2546 REMARK 3 11 2.6979 - 2.6136 0.59 1624 90 0.2329 0.2587 REMARK 3 12 2.6136 - 2.5389 1.00 2856 150 0.2317 0.2738 REMARK 3 13 2.5389 - 2.4720 1.00 2771 142 0.2490 0.2497 REMARK 3 14 2.4720 - 2.4117 1.00 2788 148 0.2530 0.3443 REMARK 3 15 2.4117 - 2.3570 1.00 2814 148 0.2837 0.3210 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.440 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7CHP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-JUL-20. REMARK 100 THE DEPOSITION ID IS D_1300017654. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JUN-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9796 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43632 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.357 REMARK 200 RESOLUTION RANGE LOW (A) : 68.220 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : 13.20 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.36 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.48 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6M0J REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M LITHIUM SULFATE MONOHYDRATE, 0.1M REMARK 280 HEPES, PH 7.5, 25% W/V PEG 3350, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 56.27200 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 85.78300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 56.27200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 85.78300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG E 319 REMARK 465 VAL E 320 REMARK 465 GLN E 321 REMARK 465 PRO E 322 REMARK 465 THR E 323 REMARK 465 GLU E 324 REMARK 465 SER E 325 REMARK 465 ILE E 326 REMARK 465 VAL E 327 REMARK 465 ARG E 328 REMARK 465 PHE E 329 REMARK 465 PRO E 330 REMARK 465 ASN E 331 REMARK 465 ILE E 332 REMARK 465 LEU E 368 REMARK 465 TYR E 369 REMARK 465 ASN E 370 REMARK 465 SER E 371 REMARK 465 THR E 523 REMARK 465 VAL E 524 REMARK 465 CYS E 525 REMARK 465 GLY E 526 REMARK 465 PRO E 527 REMARK 465 LYS E 528 REMARK 465 LYS E 529 REMARK 465 HIS E 530 REMARK 465 HIS E 531 REMARK 465 HIS E 532 REMARK 465 HIS E 533 REMARK 465 HIS E 534 REMARK 465 HIS E 535 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH L 343 O HOH L 385 1.91 REMARK 500 O HOH E 790 O HOH E 800 1.94 REMARK 500 O HOH E 702 O HOH E 705 2.00 REMARK 500 O HOH H 354 O HOH H 366 2.01 REMARK 500 NE ARG E 403 O HOH E 701 2.01 REMARK 500 O HOH E 811 O HOH E 812 2.02 REMARK 500 O HOH E 711 O HOH E 762 2.03 REMARK 500 O HOH H 362 O HOH H 380 2.13 REMARK 500 OE1 GLN L 157 O HOH L 301 2.16 REMARK 500 O HOH E 808 O HOH E 811 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO E 337 48.15 -84.48 REMARK 500 SER E 366 86.04 -162.43 REMARK 500 SER E 373 -6.21 75.61 REMARK 500 ASN E 422 -54.05 -135.12 REMARK 500 GLN H 100 -123.23 57.67 REMARK 500 SER H 136 -84.18 -21.52 REMARK 500 ASP H 148 68.81 66.98 REMARK 500 THR H 195 -64.18 -91.33 REMARK 500 PRO H 206 -8.27 -59.82 REMARK 500 LYS H 219 -78.15 -51.61 REMARK 500 ILE L 29 -158.49 -120.01 REMARK 500 ALA L 51 -38.48 76.70 REMARK 500 GLU L 81 10.33 -64.71 REMARK 500 ALA L 84 -179.48 169.77 REMARK 500 ASN L 140 76.74 57.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH E 812 DISTANCE = 6.10 ANGSTROMS REMARK 525 HOH E 813 DISTANCE = 6.59 ANGSTROMS DBREF 7CHP E 319 529 UNP P0DTC2 SPIKE_SARS2 319 529 DBREF 7CHP H 1 220 PDB 7CHP 7CHP 1 220 DBREF 7CHP L 1 216 PDB 7CHP 7CHP 1 216 SEQADV 7CHP HIS E 530 UNP P0DTC2 EXPRESSION TAG SEQADV 7CHP HIS E 531 UNP P0DTC2 EXPRESSION TAG SEQADV 7CHP HIS E 532 UNP P0DTC2 EXPRESSION TAG SEQADV 7CHP HIS E 533 UNP P0DTC2 EXPRESSION TAG SEQADV 7CHP HIS E 534 UNP P0DTC2 EXPRESSION TAG SEQADV 7CHP HIS E 535 UNP P0DTC2 EXPRESSION TAG SEQRES 1 E 217 ARG VAL GLN PRO THR GLU SER ILE VAL ARG PHE PRO ASN SEQRES 2 E 217 ILE THR ASN LEU CYS PRO PHE GLY GLU VAL PHE ASN ALA SEQRES 3 E 217 THR ARG PHE ALA SER VAL TYR ALA TRP ASN ARG LYS ARG SEQRES 4 E 217 ILE SER ASN CYS VAL ALA ASP TYR SER VAL LEU TYR ASN SEQRES 5 E 217 SER ALA SER PHE SER THR PHE LYS CYS TYR GLY VAL SER SEQRES 6 E 217 PRO THR LYS LEU ASN ASP LEU CYS PHE THR ASN VAL TYR SEQRES 7 E 217 ALA ASP SER PHE VAL ILE ARG GLY ASP GLU VAL ARG GLN SEQRES 8 E 217 ILE ALA PRO GLY GLN THR GLY LYS ILE ALA ASP TYR ASN SEQRES 9 E 217 TYR LYS LEU PRO ASP ASP PHE THR GLY CYS VAL ILE ALA SEQRES 10 E 217 TRP ASN SER ASN ASN LEU ASP SER LYS VAL GLY GLY ASN SEQRES 11 E 217 TYR ASN TYR LEU TYR ARG LEU PHE ARG LYS SER ASN LEU SEQRES 12 E 217 LYS PRO PHE GLU ARG ASP ILE SER THR GLU ILE TYR GLN SEQRES 13 E 217 ALA GLY SER THR PRO CYS ASN GLY VAL GLU GLY PHE ASN SEQRES 14 E 217 CYS TYR PHE PRO LEU GLN SER TYR GLY PHE GLN PRO THR SEQRES 15 E 217 ASN GLY VAL GLY TYR GLN PRO TYR ARG VAL VAL VAL LEU SEQRES 16 E 217 SER PHE GLU LEU LEU HIS ALA PRO ALA THR VAL CYS GLY SEQRES 17 E 217 PRO LYS LYS HIS HIS HIS HIS HIS HIS SEQRES 1 H 220 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU ILE GLN SEQRES 2 H 220 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 H 220 PHE THR VAL SER SER ASN TYR MET SER TRP VAL ARG GLN SEQRES 4 H 220 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER PHE ILE TYR SEQRES 5 H 220 SER GLY GLY SER THR TYR TYR ALA ASP SER VAL LYS GLY SEQRES 6 H 220 ARG PHE THR ILE SER ARG ASP ASN SER LYS ASN THR LEU SEQRES 7 H 220 TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR ALA SEQRES 8 H 220 VAL TYR TYR CYS ALA ARG ASP LEU GLN GLU HIS GLY MET SEQRES 9 H 220 ASP VAL TRP GLY GLN GLY THR THR VAL THR VAL SER SER SEQRES 10 H 220 ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SEQRES 11 H 220 SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU GLY SEQRES 12 H 220 CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SEQRES 13 H 220 SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS THR SEQRES 14 H 220 PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SEQRES 15 H 220 SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY THR SEQRES 16 H 220 GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN SEQRES 17 H 220 THR LYS VAL ASP LYS LYS VAL GLU PRO LYS LYS GLU SEQRES 1 L 216 ASP ILE GLN LEU THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 L 216 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 L 216 GLN GLY ILE SER SER TYR LEU ALA TRP TYR GLN GLN LYS SEQRES 4 L 216 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR ALA ALA SER SEQRES 5 L 216 THR LEU GLN SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 216 GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 L 216 GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN HIS LEU SEQRES 8 L 216 ASN SER TYR PRO PRO GLY TYR THR PHE GLY GLN GLY THR SEQRES 9 L 216 LYS LEU GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL SEQRES 10 L 216 PHE ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY SEQRES 11 L 216 THR ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO SEQRES 12 L 216 ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU SEQRES 13 L 216 GLN SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SEQRES 14 L 216 SER LYS ASP SER THR TYR SER LEU SER SER THR LEU THR SEQRES 15 L 216 LEU SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA SEQRES 16 L 216 CYS GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR SEQRES 17 L 216 LYS SER PHE ASN ARG GLY GLU CYS HET NAG E 601 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 4 NAG C8 H15 N O6 FORMUL 5 HOH *294(H2 O) HELIX 1 AA1 PRO E 337 ASN E 343 1 7 HELIX 2 AA2 SER E 349 TRP E 353 5 5 HELIX 3 AA3 ASP E 405 ILE E 410 5 6 HELIX 4 AA4 GLY E 416 ASN E 422 1 7 HELIX 5 AA5 SER E 438 SER E 443 1 6 HELIX 6 AA6 GLY E 502 TYR E 505 5 4 HELIX 7 AA7 THR H 28 ASN H 32 5 5 HELIX 8 AA8 ASP H 61 LYS H 64 5 4 HELIX 9 AA9 ARG H 86 THR H 90 5 5 HELIX 10 AB1 GLN H 100 HIS H 102 5 3 HELIX 11 AB2 SER H 160 ALA H 162 5 3 HELIX 12 AB3 SER H 191 LEU H 193 5 3 HELIX 13 AB4 LYS H 205 ASN H 208 5 4 HELIX 14 AB5 GLN L 79 PHE L 83 5 5 HELIX 15 AB6 SER L 123 LYS L 128 1 6 HELIX 16 AB7 LYS L 185 GLU L 189 1 5 SHEET 1 AA1 5 ASN E 354 ILE E 358 0 SHEET 2 AA1 5 LEU E 390 ARG E 403 -1 O ALA E 397 N LYS E 356 SHEET 3 AA1 5 PRO E 507 HIS E 519 -1 O VAL E 512 N ASP E 398 SHEET 4 AA1 5 GLY E 431 ASN E 437 -1 N ILE E 434 O VAL E 511 SHEET 5 AA1 5 THR E 376 TYR E 380 -1 N LYS E 378 O VAL E 433 SHEET 1 AA2 2 LEU E 452 ARG E 454 0 SHEET 2 AA2 2 LEU E 492 SER E 494 -1 O GLN E 493 N TYR E 453 SHEET 1 AA3 2 TYR E 473 GLN E 474 0 SHEET 2 AA3 2 CYS E 488 TYR E 489 -1 O TYR E 489 N TYR E 473 SHEET 1 AA4 4 GLN H 3 SER H 7 0 SHEET 2 AA4 4 LEU H 18 SER H 25 -1 O SER H 21 N SER H 7 SHEET 3 AA4 4 THR H 77 MET H 82 -1 O MET H 82 N LEU H 18 SHEET 4 AA4 4 PHE H 67 ASP H 72 -1 N THR H 68 O GLN H 81 SHEET 1 AA5 6 LEU H 11 ILE H 12 0 SHEET 2 AA5 6 THR H 111 VAL H 115 1 O THR H 114 N ILE H 12 SHEET 3 AA5 6 ALA H 91 ASP H 98 -1 N TYR H 93 O THR H 111 SHEET 4 AA5 6 TYR H 33 GLN H 39 -1 N VAL H 37 O TYR H 94 SHEET 5 AA5 6 GLU H 46 ILE H 51 -1 O GLU H 46 N ARG H 38 SHEET 6 AA5 6 THR H 57 TYR H 59 -1 O TYR H 58 N PHE H 50 SHEET 1 AA6 4 LEU H 11 ILE H 12 0 SHEET 2 AA6 4 THR H 111 VAL H 115 1 O THR H 114 N ILE H 12 SHEET 3 AA6 4 ALA H 91 ASP H 98 -1 N TYR H 93 O THR H 111 SHEET 4 AA6 4 MET H 104 TRP H 107 -1 O VAL H 106 N ARG H 97 SHEET 1 AA7 4 SER H 124 LEU H 128 0 SHEET 2 AA7 4 THR H 139 TYR H 149 -1 O LEU H 145 N PHE H 126 SHEET 3 AA7 4 TYR H 180 PRO H 189 -1 O LEU H 182 N VAL H 146 SHEET 4 AA7 4 VAL H 167 THR H 169 -1 N HIS H 168 O VAL H 185 SHEET 1 AA8 4 SER H 124 LEU H 128 0 SHEET 2 AA8 4 THR H 139 TYR H 149 -1 O LEU H 145 N PHE H 126 SHEET 3 AA8 4 TYR H 180 PRO H 189 -1 O LEU H 182 N VAL H 146 SHEET 4 AA8 4 VAL H 173 LEU H 174 -1 N VAL H 173 O SER H 181 SHEET 1 AA9 3 THR H 155 TRP H 158 0 SHEET 2 AA9 3 TYR H 198 HIS H 204 -1 O ASN H 201 N SER H 157 SHEET 3 AA9 3 THR H 209 VAL H 215 -1 O VAL H 211 N VAL H 202 SHEET 1 AB1 4 LEU L 4 SER L 7 0 SHEET 2 AB1 4 VAL L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 AB1 4 ASP L 70 ILE L 75 -1 O PHE L 71 N CYS L 23 SHEET 4 AB1 4 PHE L 62 SER L 67 -1 N SER L 65 O THR L 72 SHEET 1 AB2 6 SER L 10 ALA L 13 0 SHEET 2 AB2 6 THR L 104 ILE L 108 1 O GLU L 107 N LEU L 11 SHEET 3 AB2 6 ALA L 84 ASN L 92 -1 N ALA L 84 O LEU L 106 SHEET 4 AB2 6 ALA L 34 GLN L 38 -1 N GLN L 38 O THR L 85 SHEET 5 AB2 6 LYS L 45 TYR L 49 -1 O LEU L 47 N TRP L 35 SHEET 6 AB2 6 THR L 53 LEU L 54 -1 O THR L 53 N TYR L 49 SHEET 1 AB3 4 SER L 10 ALA L 13 0 SHEET 2 AB3 4 THR L 104 ILE L 108 1 O GLU L 107 N LEU L 11 SHEET 3 AB3 4 ALA L 84 ASN L 92 -1 N ALA L 84 O LEU L 106 SHEET 4 AB3 4 GLY L 97 PHE L 100 -1 O GLY L 97 N ASN L 92 SHEET 1 AB4 4 SER L 116 PHE L 120 0 SHEET 2 AB4 4 THR L 131 PHE L 141 -1 O LEU L 137 N PHE L 118 SHEET 3 AB4 4 TYR L 175 SER L 184 -1 O LEU L 183 N ALA L 132 SHEET 4 AB4 4 SER L 161 VAL L 165 -1 N GLN L 162 O THR L 180 SHEET 1 AB5 4 ALA L 155 LEU L 156 0 SHEET 2 AB5 4 LYS L 147 VAL L 152 -1 N VAL L 152 O ALA L 155 SHEET 3 AB5 4 VAL L 193 THR L 199 -1 O GLU L 197 N GLN L 149 SHEET 4 AB5 4 VAL L 207 ASN L 212 -1 O VAL L 207 N VAL L 198 SSBOND 1 CYS E 336 CYS E 361 1555 1555 2.04 SSBOND 2 CYS E 379 CYS E 432 1555 1555 2.06 SSBOND 3 CYS E 480 CYS E 488 1555 1555 2.09 SSBOND 4 CYS H 22 CYS H 95 1555 1555 2.26 SSBOND 5 CYS H 144 CYS H 200 1555 1555 2.04 SSBOND 6 CYS L 136 CYS L 196 1555 1555 1.96 LINK ND2 ASN E 343 C1 NAG E 601 1555 1555 1.45 CISPEP 1 PHE H 150 PRO H 151 0 -6.22 CISPEP 2 GLU H 152 PRO H 153 0 5.64 CISPEP 3 SER L 7 PRO L 8 0 -1.27 CISPEP 4 TYR L 94 PRO L 95 0 -14.08 CISPEP 5 TYR L 142 PRO L 143 0 2.70 CRYST1 112.544 171.566 54.873 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008885 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005829 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018224 0.00000