HEADER CHAPERONE 09-JUL-20 7CJ0 TITLE CRYSTAL STRUCTURE OF DNAJC9 HBD IN COMPLEX WITH H3.3-H4 DIMER AND MCM2 TITLE 2 HBD COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE H3.3; COMPND 3 CHAIN: E, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: HISTONE H4; COMPND 7 CHAIN: F, C; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: DNA REPLICATION LICENSING FACTOR MCM2; COMPND 11 CHAIN: G, H; COMPND 12 SYNONYM: MINICHROMOSOME MAINTENANCE PROTEIN 2 HOMOLOG,NUCLEAR PROTEIN COMPND 13 BM28; COMPND 14 EC: 3.6.4.12; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: DNAJ HOMOLOG SUBFAMILY C MEMBER 9; COMPND 18 CHAIN: D, A; COMPND 19 SYNONYM: HDJC9,DNAJ PROTEIN SB73; COMPND 20 ENGINEERED: YES; COMPND 21 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: H3-3A, H3.3A, H3F3, H3F3A, PP781, H3-3B, H3.3B, H3F3B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: HIST1H4A, H4/A, H4FA, HIST1H4B, H4/I, H4FI, HIST1H4C, H4/G, SOURCE 14 H4FG, HIST1H4D, H4/B, H4FB, HIST1H4E, H4/J, H4FJ, HIST1H4F, H4/C, SOURCE 15 H4FC, HIST1H4H, H4/H, H4FH, HIST1H4I, H4/M, H4FM, HIST1H4J, H4/E, SOURCE 16 H4FE, HIST1H4K, H4/D, H4FD, HIST1H4L, H4/K, H4FK, HIST2H4A, H4/N, SOURCE 17 H4F2, H4FN, HIST2H4, HIST2H4B, H4/O, H4FO, HIST4H4; SOURCE 18 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 20 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 21 MOL_ID: 3; SOURCE 22 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 23 ORGANISM_COMMON: HUMAN; SOURCE 24 ORGANISM_TAXID: 9606; SOURCE 25 GENE: MCM2; SOURCE 26 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 27 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 28 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 29 MOL_ID: 4; SOURCE 30 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 31 ORGANISM_COMMON: HUMAN; SOURCE 32 ORGANISM_TAXID: 9606; SOURCE 33 GENE: DNAJC9; SOURCE 34 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 35 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 36 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS HISTONE CHAPERONE, CHAPERONE EXPDTA X-RAY DIFFRACTION AUTHOR H.BAO,H.HUANG REVDAT 4 29-NOV-23 7CJ0 1 REMARK REVDAT 3 30-JUN-21 7CJ0 1 JRNL REVDAT 2 28-APR-21 7CJ0 1 JRNL REVDAT 1 14-APR-21 7CJ0 0 JRNL AUTH C.M.HAMMOND,H.BAO,I.A.HENDRIKS,M.CARRARO,A.GARCIA-NIETO, JRNL AUTH 2 Y.LIU,N.REVERON-GOMEZ,C.SPANOS,L.CHEN,J.RAPPSILBER, JRNL AUTH 3 M.L.NIELSEN,D.J.PATEL,H.HUANG,A.GROTH JRNL TITL DNAJC9 INTEGRATES HEAT SHOCK MOLECULAR CHAPERONES INTO THE JRNL TITL 2 HISTONE CHAPERONE NETWORK. JRNL REF MOL.CELL V. 81 2533 2021 JRNL REFN ISSN 1097-2765 JRNL PMID 33857403 JRNL DOI 10.1016/J.MOLCEL.2021.03.041 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : TWIN_LSQ_F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.08 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 32.390 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 29934 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.261 REMARK 3 R VALUE (WORKING SET) : 0.258 REMARK 3 FREE R VALUE : 0.295 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 1479 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.3488 - 5.5563 0.95 2905 157 0.2239 0.2612 REMARK 3 2 5.5563 - 4.4119 0.95 2660 143 0.2156 0.2658 REMARK 3 3 4.4119 - 3.8547 0.95 2624 141 0.2184 0.2875 REMARK 3 4 3.8547 - 3.5025 0.95 2572 141 0.2725 0.2884 REMARK 3 5 3.5025 - 3.2516 0.95 2568 143 0.2817 0.3384 REMARK 3 6 3.2516 - 3.0600 0.96 2543 114 0.3143 0.3585 REMARK 3 7 3.0600 - 2.9068 0.94 2535 158 0.3224 0.3631 REMARK 3 8 2.9068 - 2.7803 0.95 2487 123 0.3387 0.3339 REMARK 3 9 2.7803 - 2.6733 0.95 2530 146 0.3517 0.3912 REMARK 3 10 2.6733 - 2.5810 0.96 2562 105 0.3663 0.3739 REMARK 3 11 2.5810 - 2.5003 0.96 2456 108 0.3982 0.4031 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.600 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 81.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: 0.1300 REMARK 3 OPERATOR: -H,-K,L REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 4666 REMARK 3 ANGLE : 0.445 6245 REMARK 3 CHIRALITY : 0.035 689 REMARK 3 PLANARITY : 0.005 832 REMARK 3 DIHEDRAL : 20.557 2926 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7CJ0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-JUL-20. REMARK 100 THE DEPOSITION ID IS D_1300017696. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-NOV-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41413 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.240 REMARK 200 RESOLUTION RANGE LOW (A) : 41.084 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 17.30 REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.24 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 16.80 REMARK 200 R MERGE FOR SHELL (I) : 2.03400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5BNV REMARK 200 REMARK 200 REMARK: THE ENTRY CONTAINS FRIEDEL PAIRS IN I/F_PLUS/MINUS REMARK 200 COLUMNS. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.17 M SODIUM ACETATE, 0.1 M TRIS, REMARK 280 PH8.5, 25% (V/V) PEG 4000, 20% (V/V) GLYCEROL, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 205.42000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 410.84000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 410.84000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 205.42000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -67.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F, G, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10990 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -69.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C, H, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER E 57 REMARK 465 ALA E 135 REMARK 465 SER F 1 REMARK 465 GLY F 2 REMARK 465 ARG F 3 REMARK 465 GLY F 4 REMARK 465 LYS F 5 REMARK 465 GLY F 6 REMARK 465 GLY F 7 REMARK 465 LYS F 8 REMARK 465 GLY F 9 REMARK 465 LEU F 10 REMARK 465 GLY F 11 REMARK 465 LYS F 12 REMARK 465 GLY F 13 REMARK 465 GLY F 14 REMARK 465 ALA F 15 REMARK 465 LYS F 16 REMARK 465 ARG F 17 REMARK 465 GLY F 102 REMARK 465 GLY G 61 REMARK 465 PRO G 62 REMARK 465 LEU G 63 REMARK 465 GLU G 64 REMARK 465 GLY G 125 REMARK 465 ARG G 126 REMARK 465 GLY G 127 REMARK 465 LEU G 128 REMARK 465 GLY G 129 REMARK 465 ARG G 130 REMARK 465 GLY D 166 REMARK 465 PRO D 167 REMARK 465 LEU D 168 REMARK 465 GLY D 169 REMARK 465 SER D 170 REMARK 465 GLU D 171 REMARK 465 GLY D 249 REMARK 465 SER B 57 REMARK 465 THR B 58 REMARK 465 SER C 1 REMARK 465 GLY C 2 REMARK 465 ARG C 3 REMARK 465 GLY C 4 REMARK 465 LYS C 5 REMARK 465 GLY C 6 REMARK 465 GLY C 7 REMARK 465 LYS C 8 REMARK 465 GLY C 9 REMARK 465 LEU C 10 REMARK 465 GLY C 11 REMARK 465 LYS C 12 REMARK 465 GLY C 13 REMARK 465 GLY C 14 REMARK 465 ALA C 15 REMARK 465 LYS C 16 REMARK 465 ARG C 17 REMARK 465 HIS C 18 REMARK 465 ARG C 19 REMARK 465 LYS C 20 REMARK 465 VAL C 21 REMARK 465 GLY C 101 REMARK 465 GLY C 102 REMARK 465 GLY H 61 REMARK 465 PRO H 62 REMARK 465 LEU H 63 REMARK 465 GLU H 64 REMARK 465 GLU H 65 REMARK 465 GLU H 66 REMARK 465 ARG H 126 REMARK 465 GLY H 127 REMARK 465 LEU H 128 REMARK 465 GLY H 129 REMARK 465 ARG H 130 REMARK 465 GLY A 166 REMARK 465 PRO A 167 REMARK 465 LEU A 168 REMARK 465 GLY A 169 REMARK 465 SER A 170 REMARK 465 GLY A 248 REMARK 465 GLY A 249 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG E 83 CG CD NE CZ NH1 NH2 REMARK 470 HIS F 18 CG ND1 CD2 CE1 NE2 REMARK 470 ARG F 19 CG CD NE CZ NH1 NH2 REMARK 470 LYS F 20 CG CD CE NZ REMARK 470 GLU G 65 CG CD OE1 OE2 REMARK 470 GLU G 78 CG CD OE1 OE2 REMARK 470 GLU G 123 CG CD OE1 OE2 REMARK 470 VAL D 172 CG1 CG2 REMARK 470 LYS D 180 CG CD CE NZ REMARK 470 LYS D 183 CG CD CE NZ REMARK 470 LYS D 190 CG CD CE NZ REMARK 470 GLU B 59 CG CD OE1 OE2 REMARK 470 ARG B 69 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 83 CG CD NE CZ NH1 NH2 REMARK 470 LEU C 22 CG CD1 CD2 REMARK 470 ARG C 23 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 44 CG CD CE NZ REMARK 470 ILE C 46 CD1 REMARK 470 ARG H 79 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 171 CG CD OE1 OE2 REMARK 470 VAL A 172 CG1 CG2 REMARK 470 LYS A 183 CG CD CE NZ REMARK 470 LYS A 190 CG CD CE NZ REMARK 470 LYS A 198 CG CD CE NZ REMARK 470 ARG A 204 CZ NH1 NH2 REMARK 470 LYS A 205 CG CD CE NZ REMARK 470 LEU A 209 CG CD1 CD2 REMARK 470 LYS A 247 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP G 99 30.78 -92.46 REMARK 500 GLU H 78 -62.19 -95.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL E 201 DBREF 7CJ0 E 57 135 UNP P84243 H33_HUMAN 58 136 DBREF 7CJ0 F 1 102 UNP P62805 H4_HUMAN 2 103 DBREF 7CJ0 G 61 130 UNP P49736 MCM2_HUMAN 61 130 DBREF 7CJ0 D 171 249 UNP Q8WXX5 DNJC9_HUMAN 171 249 DBREF 7CJ0 B 57 135 UNP P84243 H33_HUMAN 58 136 DBREF 7CJ0 C 1 102 UNP P62805 H4_HUMAN 2 103 DBREF 7CJ0 H 61 130 UNP P49736 MCM2_HUMAN 61 130 DBREF 7CJ0 A 171 249 UNP Q8WXX5 DNJC9_HUMAN 171 249 SEQADV 7CJ0 GLY D 166 UNP Q8WXX5 EXPRESSION TAG SEQADV 7CJ0 PRO D 167 UNP Q8WXX5 EXPRESSION TAG SEQADV 7CJ0 LEU D 168 UNP Q8WXX5 EXPRESSION TAG SEQADV 7CJ0 GLY D 169 UNP Q8WXX5 EXPRESSION TAG SEQADV 7CJ0 SER D 170 UNP Q8WXX5 EXPRESSION TAG SEQADV 7CJ0 SER D 243 UNP Q8WXX5 CYS 243 ENGINEERED MUTATION SEQADV 7CJ0 GLY A 166 UNP Q8WXX5 EXPRESSION TAG SEQADV 7CJ0 PRO A 167 UNP Q8WXX5 EXPRESSION TAG SEQADV 7CJ0 LEU A 168 UNP Q8WXX5 EXPRESSION TAG SEQADV 7CJ0 GLY A 169 UNP Q8WXX5 EXPRESSION TAG SEQADV 7CJ0 SER A 170 UNP Q8WXX5 EXPRESSION TAG SEQADV 7CJ0 SER A 243 UNP Q8WXX5 CYS 243 ENGINEERED MUTATION SEQRES 1 E 79 SER THR GLU LEU LEU ILE ARG LYS LEU PRO PHE GLN ARG SEQRES 2 E 79 LEU VAL ARG GLU ILE ALA GLN ASP PHE LYS THR ASP LEU SEQRES 3 E 79 ARG PHE GLN SER ALA ALA ILE GLY ALA LEU GLN GLU ALA SEQRES 4 E 79 SER GLU ALA TYR LEU VAL GLY LEU PHE GLU ASP THR ASN SEQRES 5 E 79 LEU CYS ALA ILE HIS ALA LYS ARG VAL THR ILE MET PRO SEQRES 6 E 79 LYS ASP ILE GLN LEU ALA ARG ARG ILE ARG GLY GLU ARG SEQRES 7 E 79 ALA SEQRES 1 F 102 SER GLY ARG GLY LYS GLY GLY LYS GLY LEU GLY LYS GLY SEQRES 2 F 102 GLY ALA LYS ARG HIS ARG LYS VAL LEU ARG ASP ASN ILE SEQRES 3 F 102 GLN GLY ILE THR LYS PRO ALA ILE ARG ARG LEU ALA ARG SEQRES 4 F 102 ARG GLY GLY VAL LYS ARG ILE SER GLY LEU ILE TYR GLU SEQRES 5 F 102 GLU THR ARG GLY VAL LEU LYS VAL PHE LEU GLU ASN VAL SEQRES 6 F 102 ILE ARG ASP ALA VAL THR TYR THR GLU HIS ALA LYS ARG SEQRES 7 F 102 LYS THR VAL THR ALA MET ASP VAL VAL TYR ALA LEU LYS SEQRES 8 F 102 ARG GLN GLY ARG THR LEU TYR GLY PHE GLY GLY SEQRES 1 G 70 GLY PRO LEU GLU GLU GLU GLU ASP GLY GLU GLU LEU ILE SEQRES 2 G 70 GLY ASP GLY MET GLU ARG ASP TYR ARG ALA ILE PRO GLU SEQRES 3 G 70 LEU ASP ALA TYR GLU ALA GLU GLY LEU ALA LEU ASP ASP SEQRES 4 G 70 GLU ASP VAL GLU GLU LEU THR ALA SER GLN ARG GLU ALA SEQRES 5 G 70 ALA GLU ARG ALA MET ARG GLN ARG ASP ARG GLU ALA GLY SEQRES 6 G 70 ARG GLY LEU GLY ARG SEQRES 1 D 84 GLY PRO LEU GLY SER GLU VAL PRO SER TYR ASN ALA PHE SEQRES 2 D 84 VAL LYS GLU SER LYS GLN LYS MET ASN ALA ARG LYS ARG SEQRES 3 D 84 ARG ALA GLN GLU GLU ALA LYS GLU ALA GLU MET SER ARG SEQRES 4 D 84 LYS GLU LEU GLY LEU ASP GLU GLY VAL ASP SER LEU LYS SEQRES 5 D 84 ALA ALA ILE GLN SER ARG GLN LYS ASP ARG GLN LYS GLU SEQRES 6 D 84 MET ASP ASN PHE LEU ALA GLN MET GLU ALA LYS TYR SER SEQRES 7 D 84 LYS SER SER LYS GLY GLY SEQRES 1 B 79 SER THR GLU LEU LEU ILE ARG LYS LEU PRO PHE GLN ARG SEQRES 2 B 79 LEU VAL ARG GLU ILE ALA GLN ASP PHE LYS THR ASP LEU SEQRES 3 B 79 ARG PHE GLN SER ALA ALA ILE GLY ALA LEU GLN GLU ALA SEQRES 4 B 79 SER GLU ALA TYR LEU VAL GLY LEU PHE GLU ASP THR ASN SEQRES 5 B 79 LEU CYS ALA ILE HIS ALA LYS ARG VAL THR ILE MET PRO SEQRES 6 B 79 LYS ASP ILE GLN LEU ALA ARG ARG ILE ARG GLY GLU ARG SEQRES 7 B 79 ALA SEQRES 1 C 102 SER GLY ARG GLY LYS GLY GLY LYS GLY LEU GLY LYS GLY SEQRES 2 C 102 GLY ALA LYS ARG HIS ARG LYS VAL LEU ARG ASP ASN ILE SEQRES 3 C 102 GLN GLY ILE THR LYS PRO ALA ILE ARG ARG LEU ALA ARG SEQRES 4 C 102 ARG GLY GLY VAL LYS ARG ILE SER GLY LEU ILE TYR GLU SEQRES 5 C 102 GLU THR ARG GLY VAL LEU LYS VAL PHE LEU GLU ASN VAL SEQRES 6 C 102 ILE ARG ASP ALA VAL THR TYR THR GLU HIS ALA LYS ARG SEQRES 7 C 102 LYS THR VAL THR ALA MET ASP VAL VAL TYR ALA LEU LYS SEQRES 8 C 102 ARG GLN GLY ARG THR LEU TYR GLY PHE GLY GLY SEQRES 1 H 70 GLY PRO LEU GLU GLU GLU GLU ASP GLY GLU GLU LEU ILE SEQRES 2 H 70 GLY ASP GLY MET GLU ARG ASP TYR ARG ALA ILE PRO GLU SEQRES 3 H 70 LEU ASP ALA TYR GLU ALA GLU GLY LEU ALA LEU ASP ASP SEQRES 4 H 70 GLU ASP VAL GLU GLU LEU THR ALA SER GLN ARG GLU ALA SEQRES 5 H 70 ALA GLU ARG ALA MET ARG GLN ARG ASP ARG GLU ALA GLY SEQRES 6 H 70 ARG GLY LEU GLY ARG SEQRES 1 A 84 GLY PRO LEU GLY SER GLU VAL PRO SER TYR ASN ALA PHE SEQRES 2 A 84 VAL LYS GLU SER LYS GLN LYS MET ASN ALA ARG LYS ARG SEQRES 3 A 84 ARG ALA GLN GLU GLU ALA LYS GLU ALA GLU MET SER ARG SEQRES 4 A 84 LYS GLU LEU GLY LEU ASP GLU GLY VAL ASP SER LEU LYS SEQRES 5 A 84 ALA ALA ILE GLN SER ARG GLN LYS ASP ARG GLN LYS GLU SEQRES 6 A 84 MET ASP ASN PHE LEU ALA GLN MET GLU ALA LYS TYR SER SEQRES 7 A 84 LYS SER SER LYS GLY GLY HET GOL E 201 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 9 GOL C3 H8 O3 FORMUL 10 HOH *69(H2 O) HELIX 1 AA1 ARG E 63 GLN E 76 1 14 HELIX 2 AA2 GLN E 85 ALA E 114 1 30 HELIX 3 AA3 MET E 120 GLY E 132 1 13 HELIX 4 AA4 ASP F 24 ILE F 29 5 6 HELIX 5 AA5 THR F 30 GLY F 41 1 12 HELIX 6 AA6 LEU F 49 ALA F 76 1 28 HELIX 7 AA7 THR F 82 LEU F 97 1 16 HELIX 8 AA8 GLY G 76 ARG G 82 5 7 HELIX 9 AA9 THR G 106 GLU G 123 1 18 HELIX 10 AB1 SER D 174 GLY D 208 1 35 HELIX 11 AB2 GLY D 212 SER D 243 1 32 HELIX 12 AB3 SER D 243 GLY D 248 1 6 HELIX 13 AB4 ARG B 63 ASP B 77 1 15 HELIX 14 AB5 SER B 86 ALA B 114 1 29 HELIX 15 AB6 MET B 120 GLY B 132 1 13 HELIX 16 AB7 ASP C 24 ILE C 29 5 6 HELIX 17 AB8 THR C 30 GLY C 41 1 12 HELIX 18 AB9 LEU C 49 ALA C 76 1 28 HELIX 19 AC1 THR C 82 LEU C 97 1 16 HELIX 20 AC2 THR H 106 GLY H 125 1 20 HELIX 21 AC3 VAL A 172 LYS A 205 1 34 HELIX 22 AC4 GLY A 212 SER A 243 1 32 SHEET 1 AA1 2 ARG E 83 PHE E 84 0 SHEET 2 AA1 2 THR F 80 VAL F 81 1 O VAL F 81 N ARG E 83 SHEET 1 AA2 3 THR E 118 ILE E 119 0 SHEET 2 AA2 3 ARG F 45 ILE F 46 1 O ARG F 45 N ILE E 119 SHEET 3 AA2 3 GLU G 70 GLU G 71 -1 O GLU G 70 N ILE F 46 SHEET 1 AA3 2 PHE B 84 GLN B 85 0 SHEET 2 AA3 2 LEU H 95 ALA H 96 1 O ALA H 96 N PHE B 84 SHEET 1 AA4 3 THR B 118 ILE B 119 0 SHEET 2 AA4 3 ARG C 45 ILE C 46 1 O ARG C 45 N ILE B 119 SHEET 3 AA4 3 GLU H 70 GLU H 71 -1 O GLU H 70 N ILE C 46 SITE 1 AC1 6 ASP D 214 GLN E 85 SER E 86 ALA E 87 SITE 2 AC1 6 ALA G 96 ASP G 99 CRYST1 47.510 47.510 616.260 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021048 0.012152 0.000000 0.00000 SCALE2 0.000000 0.024304 0.000000 0.00000 SCALE3 0.000000 0.000000 0.001623 0.00000