HEADER IMMUNE SYSTEM 09-JUL-20 7CJ2 TITLE CRYSTAL STRUCTURE OF THE FAB ANTIBODY COMPLEXED WITH HUMAN YKL-40 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FAB(HEAVY CHAIN); COMPND 3 CHAIN: C, K; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: FAB(LIGHT CHAIN); COMPND 7 CHAIN: D, L; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: CHITINASE 3-LIKE 1 (CARTILAGE GLYCOPROTEIN-39), ISOFORM COMPND 11 CRA_A; COMPND 12 CHAIN: A, B; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21[DE3]; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 13 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 14 EXPRESSION_SYSTEM_STRAIN: BL21[DE3]; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_COMMON: HUMAN; SOURCE 18 ORGANISM_TAXID: 9606; SOURCE 19 GENE: CHI3L1, HCG_24326; SOURCE 20 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 21 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS CHITIN BINDING PROTEIN, INFLAMMATORY RESPONSE, FAB, ANTIBODY-ANTIGEN KEYWDS 2 COMPLEX, APOPTOSIS, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR S.CHOI,J.H.NA,S.J.LEE,J.R.WOO,D.Y.KIM,J.T.HONG,W.K.LEE REVDAT 2 29-NOV-23 7CJ2 1 REMARK REVDAT 1 14-JUL-21 7CJ2 0 JRNL AUTH S.CHOI,J.H.NA,S.J.LEE,J.R.WOO,D.Y.KIM,W.K.LEE JRNL TITL CRYSTAL STRUCTURE OF THE FAB ANTIBODY COMPLEXED WITH HUMAN JRNL TITL 2 YKL-40 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.83 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 52996 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.269 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 2640 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.8300 - 7.2000 1.00 2850 154 0.2273 0.2744 REMARK 3 2 7.2000 - 5.7200 1.00 2732 120 0.2484 0.2890 REMARK 3 3 5.7100 - 4.9900 1.00 2680 146 0.2028 0.2601 REMARK 3 4 4.9900 - 4.5400 1.00 2693 135 0.1733 0.2290 REMARK 3 5 4.5400 - 4.2100 1.00 2651 128 0.1764 0.2087 REMARK 3 6 4.2100 - 3.9600 1.00 2694 132 0.1823 0.2364 REMARK 3 7 3.9600 - 3.7700 1.00 2629 139 0.1924 0.2789 REMARK 3 8 3.7700 - 3.6000 1.00 2628 140 0.1970 0.2657 REMARK 3 9 3.6000 - 3.4600 1.00 2635 144 0.1980 0.2480 REMARK 3 10 3.4600 - 3.3400 1.00 2621 145 0.2100 0.2475 REMARK 3 11 3.3400 - 3.2400 1.00 2645 136 0.2287 0.2729 REMARK 3 12 3.2400 - 3.1500 1.00 2595 146 0.2410 0.3130 REMARK 3 13 3.1500 - 3.0600 1.00 2637 141 0.2341 0.3148 REMARK 3 14 3.0600 - 2.9900 1.00 2619 150 0.2441 0.3241 REMARK 3 15 2.9900 - 2.9200 1.00 2595 144 0.2504 0.3303 REMARK 3 16 2.9200 - 2.8600 1.00 2623 119 0.2465 0.3262 REMARK 3 17 2.8600 - 2.8000 1.00 2609 144 0.2552 0.3419 REMARK 3 18 2.8000 - 2.7500 1.00 2619 136 0.2767 0.3592 REMARK 3 19 2.7500 - 2.7000 1.00 2601 141 0.2947 0.3836 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.401 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.052 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 64.19 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 64.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 11787 REMARK 3 ANGLE : 1.050 16062 REMARK 3 CHIRALITY : 0.054 1818 REMARK 3 PLANARITY : 0.006 2058 REMARK 3 DIHEDRAL : 14.859 1671 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7CJ2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-JUL-20. REMARK 100 THE DEPOSITION ID IS D_1300017596. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-FEB-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS V1.0.5 REMARK 200 DATA SCALING SOFTWARE : XDS V1.0.5 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 70738 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 45.830 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.09200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.48 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.07466 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.17.1_3660 REMARK 200 STARTING MODEL: 1HJX,5VEB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.6M SODIUM CHLORIDE, 0.1M MES:NAOH, REMARK 280 PH 6.5, 20% (W/V)PEG 4000, 1.0M NDSB-256, MICROBATCH, REMARK 280 TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 44.79150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.00350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 66.26300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 80.00350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 44.79150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 66.26300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, A, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, K, L, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER C 131 REMARK 465 LYS C 132 REMARK 465 SER C 133 REMARK 465 THR C 134 REMARK 465 SER C 135 REMARK 465 GLY C 136 REMARK 465 GLY C 137 REMARK 465 THR C 194 REMARK 465 GLN C 195 REMARK 465 THR C 196 REMARK 465 GLU C 215 REMARK 465 PRO C 216 REMARK 465 LYS C 217 REMARK 465 SER C 218 REMARK 465 CYS C 219 REMARK 465 ASP C 220 REMARK 465 LYS C 221 REMARK 465 THR C 222 REMARK 465 ARG D 212 REMARK 465 GLY D 213 REMARK 465 GLU D 214 REMARK 465 CYS D 215 REMARK 465 THR A 362 REMARK 465 THR B 362 REMARK 465 PRO K 129 REMARK 465 SER K 130 REMARK 465 SER K 131 REMARK 465 LYS K 132 REMARK 465 SER K 133 REMARK 465 THR K 134 REMARK 465 SER K 135 REMARK 465 GLY K 136 REMARK 465 GLY K 137 REMARK 465 THR K 138 REMARK 465 ALA K 139 REMARK 465 ALA K 140 REMARK 465 LEU K 141 REMARK 465 THR K 186 REMARK 465 VAL K 187 REMARK 465 PRO K 188 REMARK 465 SER K 189 REMARK 465 SER K 190 REMARK 465 SER K 191 REMARK 465 LEU K 192 REMARK 465 GLY K 193 REMARK 465 THR K 194 REMARK 465 GLN K 195 REMARK 465 THR K 196 REMARK 465 TYR K 197 REMARK 465 CYS K 199 REMARK 465 ASN K 200 REMARK 465 PRO K 216 REMARK 465 LYS K 217 REMARK 465 SER K 218 REMARK 465 CYS K 219 REMARK 465 ASP K 220 REMARK 465 LYS K 221 REMARK 465 THR K 222 REMARK 465 SER L 209 REMARK 465 PHE L 210 REMARK 465 ASN L 211 REMARK 465 ARG L 212 REMARK 465 GLY L 213 REMARK 465 GLU L 214 REMARK 465 CYS L 215 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS C 120 CG CD CE NZ REMARK 470 SER C 123 OG REMARK 470 LEU C 127 CG CD1 CD2 REMARK 470 LEU C 141 CG CD1 CD2 REMARK 470 LYS C 146 CG CD CE NZ REMARK 470 ASN C 158 CG OD1 ND2 REMARK 470 SER C 175 OG REMARK 470 TYR C 197 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS C 204 CG CD CE NZ REMARK 470 LYS C 209 CG CD CE NZ REMARK 470 LYS C 212 CG CD CE NZ REMARK 470 LYS C 213 CG CD CE NZ REMARK 470 ARG D 24 NE CZ NH1 NH2 REMARK 470 LYS D 42 CE NZ REMARK 470 LYS D 45 CD CE NZ REMARK 470 LYS D 107 CD CE NZ REMARK 470 ASP D 123 CG OD1 OD2 REMARK 470 GLU D 124 CG CD OE1 OE2 REMARK 470 LEU D 126 CG CD1 CD2 REMARK 470 LYS D 127 CG CD CE NZ REMARK 470 GLU D 144 CG CD OE1 OE2 REMARK 470 LYS D 146 CG CD CE NZ REMARK 470 LYS D 150 CG CD CE NZ REMARK 470 ASP D 152 CG OD1 OD2 REMARK 470 LEU D 155 CG CD1 CD2 REMARK 470 GLN D 161 CG CD OE1 NE2 REMARK 470 LYS D 170 CG CD CE NZ REMARK 470 LEU D 182 CG CD1 CD2 REMARK 470 LYS D 184 CG CD CE NZ REMARK 470 GLU D 188 CG CD OE1 OE2 REMARK 470 LYS D 189 CG CD CE NZ REMARK 470 GLU D 196 CG CD OE1 OE2 REMARK 470 LYS D 208 CG CD CE NZ REMARK 470 ASN A 68 CG OD1 ND2 REMARK 470 LYS A 70 CE NZ REMARK 470 TRP A 78 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 78 CZ3 CH2 REMARK 470 ASN A 79 CG OD1 ND2 REMARK 470 GLN A 83 CG CD OE1 NE2 REMARK 470 ILE A 88 CD1 REMARK 470 GLN A 93 CG CD OE1 NE2 REMARK 470 LYS A 100 CG CD CE NZ REMARK 470 GLN A 127 CG CD OE1 NE2 REMARK 470 LYS A 134 CG CD CE NZ REMARK 470 PHE A 140 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN A 145 CG CD OE1 NE2 REMARK 470 LYS A 148 CE NZ REMARK 470 LYS A 149 CD CE NZ REMARK 470 ARG A 192 CZ NH1 NH2 REMARK 470 ARG A 225 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 283 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 15 CG CD OE1 OE2 REMARK 470 ARG B 65 CZ NH1 NH2 REMARK 470 GLN B 83 CG CD OE1 NE2 REMARK 470 LYS B 87 CG CD CE NZ REMARK 470 ARG B 123 NE CZ NH1 NH2 REMARK 470 ARG B 124 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 126 CG CD CE NZ REMARK 470 LYS B 142 CD CE NZ REMARK 470 LYS B 149 CG CD CE NZ REMARK 470 LYS B 172 CD CE NZ REMARK 470 ARG B 212 NE CZ NH1 NH2 REMARK 470 LYS B 321 NZ REMARK 470 ASN K 74 CG OD1 ND2 REMARK 470 LYS K 76 CG CD CE NZ REMARK 470 ARG K 87 NE CZ NH1 NH2 REMARK 470 GLN K 107 CG CD OE1 NE2 REMARK 470 ASP K 147 CG OD1 OD2 REMARK 470 VAL K 155 CG1 CG2 REMARK 470 ASN K 158 CG OD1 ND2 REMARK 470 LEU K 162 CG CD1 CD2 REMARK 470 THR K 163 OG1 CG2 REMARK 470 VAL K 172 CG1 CG2 REMARK 470 SER K 175 OG REMARK 470 SER K 176 OG REMARK 470 ILE K 198 CG1 CG2 CD1 REMARK 470 LYS K 204 CG CD CE NZ REMARK 470 LYS K 209 CG CD CE NZ REMARK 470 LYS K 212 CG CD CE NZ REMARK 470 LYS K 213 CG CD CE NZ REMARK 470 VAL K 214 CG1 CG2 REMARK 470 GLU K 215 CG CD OE1 OE2 REMARK 470 GLN L 3 CG CD OE1 NE2 REMARK 470 ARG L 24 NE CZ NH1 NH2 REMARK 470 GLU L 105 CD OE1 OE2 REMARK 470 ASP L 123 CG OD1 OD2 REMARK 470 LEU L 126 CG CD1 CD2 REMARK 470 LYS L 127 CG CD CE NZ REMARK 470 ASN L 138 CG OD1 ND2 REMARK 470 GLU L 144 CG CD OE1 OE2 REMARK 470 LYS L 146 CG CD CE NZ REMARK 470 GLN L 148 CG CD OE1 NE2 REMARK 470 LEU L 155 CG CD1 CD2 REMARK 470 SER L 157 OG REMARK 470 ASN L 159 CG OD1 ND2 REMARK 470 LYS L 170 CG CD CE NZ REMARK 470 LEU L 182 CG CD1 CD2 REMARK 470 SER L 183 OG REMARK 470 LYS L 184 CG CD CE NZ REMARK 470 GLU L 188 CG CD OE1 OE2 REMARK 470 LYS L 191 CD CE NZ REMARK 470 VAL L 197 CG1 CG2 REMARK 470 GLN L 200 CG CD OE1 NE2 REMARK 470 LYS L 208 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER C 206 OG1 THR C 208 2.02 REMARK 500 O GLN L 125 OG SER L 128 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OG SER C 190 O ALA A 360 3655 1.85 REMARK 500 NH2 ARG B 192 O SER K 117 3755 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS C 96 CA - CB - SG ANGL. DEV. = 9.8 DEGREES REMARK 500 CYS K 96 CA - CB - SG ANGL. DEV. = 7.3 DEGREES REMARK 500 CYS K 143 CA - CB - SG ANGL. DEV. = 7.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP C 147 77.51 56.80 REMARK 500 ASN C 158 -113.03 51.43 REMARK 500 SER D 30 -111.18 58.42 REMARK 500 ALA D 51 -30.95 73.71 REMARK 500 SER D 52 -1.40 -147.87 REMARK 500 ALA D 84 173.68 179.61 REMARK 500 HIS D 199 145.75 -174.27 REMARK 500 PHE D 210 148.09 -175.20 REMARK 500 TRP A 48 -73.01 -68.79 REMARK 500 GLN A 205 113.33 -39.15 REMARK 500 SER A 214 59.53 -91.08 REMARK 500 ALA B 190 -7.59 -59.59 REMARK 500 ASP B 309 -168.97 -119.63 REMARK 500 GLU K 89 1.83 -66.99 REMARK 500 ASP K 147 81.69 56.11 REMARK 500 PRO K 150 -159.56 -86.39 REMARK 500 SER L 30 -110.49 51.91 REMARK 500 ALA L 51 -43.91 72.48 REMARK 500 ALA L 84 162.62 178.91 REMARK 500 ASN L 153 84.66 -69.91 REMARK 500 SER L 157 -70.39 -59.81 REMARK 500 SER L 172 60.76 38.49 REMARK 500 ALA L 185 -0.54 78.21 REMARK 500 LYS L 191 -36.32 -130.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH D 324 DISTANCE = 6.43 ANGSTROMS REMARK 525 HOH K 325 DISTANCE = 6.07 ANGSTROMS REMARK 525 HOH K 326 DISTANCE = 6.38 ANGSTROMS REMARK 525 HOH K 327 DISTANCE = 7.13 ANGSTROMS REMARK 525 HOH L 331 DISTANCE = 6.65 ANGSTROMS REMARK 525 HOH L 332 DISTANCE = 6.74 ANGSTROMS DBREF 7CJ2 C 1 222 PDB 7CJ2 7CJ2 1 222 DBREF 7CJ2 D 1 215 PDB 7CJ2 7CJ2 1 215 DBREF1 7CJ2 A 1 362 UNP A0A024R969_HUMAN DBREF2 7CJ2 A A0A024R969 22 383 DBREF1 7CJ2 B 1 362 UNP A0A024R969_HUMAN DBREF2 7CJ2 B A0A024R969 22 383 DBREF 7CJ2 K 1 222 PDB 7CJ2 7CJ2 1 222 DBREF 7CJ2 L 1 215 PDB 7CJ2 7CJ2 1 215 SEQRES 1 C 222 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 C 222 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 C 222 PHE THR PHE SER ASN TYR ALA MET SER TRP VAL ARG GLN SEQRES 4 C 222 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER GLY ILE SER SEQRES 5 C 222 GLY SER GLY GLY THR THR TYR TYR ALA ASP SER VAL LYS SEQRES 6 C 222 GLY ARG PHE THR ILE SER ARG ASP ASN SER LYS ASN THR SEQRES 7 C 222 LEU TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 C 222 ALA VAL TYR TYR CYS ALA GLY VAL GLY THR PHE ASP VAL SEQRES 9 C 222 TRP GLY GLN GLY THR LEU VAL THR VAL SER SER ALA SER SEQRES 10 C 222 THR ALA LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SEQRES 11 C 222 SER LYS SER THR SER GLY GLY THR ALA ALA LEU GLY CYS SEQRES 12 C 222 LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER SEQRES 13 C 222 TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS THR PHE SEQRES 14 C 222 PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SEQRES 15 C 222 SER VAL VAL THR VAL PRO SER SER SER LEU GLY THR GLN SEQRES 16 C 222 THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR SEQRES 17 C 222 LYS VAL ASP LYS LYS VAL GLU PRO LYS SER CYS ASP LYS SEQRES 18 C 222 THR SEQRES 1 D 215 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 D 215 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 D 215 GLN THR ILE SER SER TRP LEU ASN TRP TYR GLN GLN LYS SEQRES 4 D 215 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR ALA ALA SER SEQRES 5 D 215 ARG LEU GLN SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 D 215 GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 D 215 GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN SER SEQRES 8 D 215 TYR SER THR PRO LEU THR PHE GLY GLN GLY THR LYS VAL SEQRES 9 D 215 GLU ILE LYS ALA SER THR VAL ALA ALA PRO SER VAL PHE SEQRES 10 D 215 ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR SEQRES 11 D 215 ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG SEQRES 12 D 215 GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SEQRES 13 D 215 SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER SEQRES 14 D 215 LYS ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SEQRES 15 D 215 SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS SEQRES 16 D 215 GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SEQRES 17 D 215 SER PHE ASN ARG GLY GLU CYS SEQRES 1 A 362 TYR LYS LEU VAL CYS TYR TYR THR SER TRP SER GLN TYR SEQRES 2 A 362 ARG GLU GLY ASP GLY SER CYS PHE PRO ASP ALA LEU ASP SEQRES 3 A 362 ARG PHE LEU CYS THR HIS ILE ILE TYR SER PHE ALA ASN SEQRES 4 A 362 ILE SER ASN ASP HIS ILE ASP THR TRP GLU TRP ASN ASP SEQRES 5 A 362 VAL THR LEU TYR GLY MET LEU ASN THR LEU LYS ASN ARG SEQRES 6 A 362 ASN PRO ASN LEU LYS THR LEU LEU SER VAL GLY GLY TRP SEQRES 7 A 362 ASN PHE GLY SER GLN ARG PHE SER LYS ILE ALA SER ASN SEQRES 8 A 362 THR GLN SER ARG ARG THR PHE ILE LYS SER VAL PRO PRO SEQRES 9 A 362 PHE LEU ARG THR HIS GLY PHE ASP GLY LEU ASP LEU ALA SEQRES 10 A 362 TRP LEU TYR PRO GLY ARG ARG ASP LYS GLN HIS PHE THR SEQRES 11 A 362 THR LEU ILE LYS GLU MET LYS ALA GLU PHE ILE LYS GLU SEQRES 12 A 362 ALA GLN PRO GLY LYS LYS GLN LEU LEU LEU SER ALA ALA SEQRES 13 A 362 LEU SER ALA GLY LYS VAL THR ILE ASP SER SER TYR ASP SEQRES 14 A 362 ILE ALA LYS ILE SER GLN HIS LEU ASP PHE ILE SER ILE SEQRES 15 A 362 MET THR TYR ASP PHE HIS GLY ALA TRP ARG GLY THR THR SEQRES 16 A 362 GLY HIS HIS SER PRO LEU PHE ARG GLY GLN GLU ASP ALA SEQRES 17 A 362 SER PRO ASP ARG PHE SER ASN THR ASP TYR ALA VAL GLY SEQRES 18 A 362 TYR MET LEU ARG LEU GLY ALA PRO ALA SER LYS LEU VAL SEQRES 19 A 362 MET GLY ILE PRO THR PHE GLY ARG SER PHE THR LEU ALA SEQRES 20 A 362 SER SER GLU THR GLY VAL GLY ALA PRO ILE SER GLY PRO SEQRES 21 A 362 GLY ILE PRO GLY ARG PHE THR LYS GLU ALA GLY THR LEU SEQRES 22 A 362 ALA TYR TYR GLU ILE CYS ASP PHE LEU ARG GLY ALA THR SEQRES 23 A 362 VAL HIS ARG ILE LEU GLY GLN GLN VAL PRO TYR ALA THR SEQRES 24 A 362 LYS GLY ASN GLN TRP VAL GLY TYR ASP ASP GLN GLU SER SEQRES 25 A 362 VAL LYS SER LYS VAL GLN TYR LEU LYS ASP ARG GLN LEU SEQRES 26 A 362 ALA GLY ALA MET VAL TRP ALA LEU ASP LEU ASP ASP PHE SEQRES 27 A 362 GLN GLY SER PHE CYS GLY GLN ASP LEU ARG PHE PRO LEU SEQRES 28 A 362 THR ASN ALA ILE LYS ASP ALA LEU ALA ALA THR SEQRES 1 B 362 TYR LYS LEU VAL CYS TYR TYR THR SER TRP SER GLN TYR SEQRES 2 B 362 ARG GLU GLY ASP GLY SER CYS PHE PRO ASP ALA LEU ASP SEQRES 3 B 362 ARG PHE LEU CYS THR HIS ILE ILE TYR SER PHE ALA ASN SEQRES 4 B 362 ILE SER ASN ASP HIS ILE ASP THR TRP GLU TRP ASN ASP SEQRES 5 B 362 VAL THR LEU TYR GLY MET LEU ASN THR LEU LYS ASN ARG SEQRES 6 B 362 ASN PRO ASN LEU LYS THR LEU LEU SER VAL GLY GLY TRP SEQRES 7 B 362 ASN PHE GLY SER GLN ARG PHE SER LYS ILE ALA SER ASN SEQRES 8 B 362 THR GLN SER ARG ARG THR PHE ILE LYS SER VAL PRO PRO SEQRES 9 B 362 PHE LEU ARG THR HIS GLY PHE ASP GLY LEU ASP LEU ALA SEQRES 10 B 362 TRP LEU TYR PRO GLY ARG ARG ASP LYS GLN HIS PHE THR SEQRES 11 B 362 THR LEU ILE LYS GLU MET LYS ALA GLU PHE ILE LYS GLU SEQRES 12 B 362 ALA GLN PRO GLY LYS LYS GLN LEU LEU LEU SER ALA ALA SEQRES 13 B 362 LEU SER ALA GLY LYS VAL THR ILE ASP SER SER TYR ASP SEQRES 14 B 362 ILE ALA LYS ILE SER GLN HIS LEU ASP PHE ILE SER ILE SEQRES 15 B 362 MET THR TYR ASP PHE HIS GLY ALA TRP ARG GLY THR THR SEQRES 16 B 362 GLY HIS HIS SER PRO LEU PHE ARG GLY GLN GLU ASP ALA SEQRES 17 B 362 SER PRO ASP ARG PHE SER ASN THR ASP TYR ALA VAL GLY SEQRES 18 B 362 TYR MET LEU ARG LEU GLY ALA PRO ALA SER LYS LEU VAL SEQRES 19 B 362 MET GLY ILE PRO THR PHE GLY ARG SER PHE THR LEU ALA SEQRES 20 B 362 SER SER GLU THR GLY VAL GLY ALA PRO ILE SER GLY PRO SEQRES 21 B 362 GLY ILE PRO GLY ARG PHE THR LYS GLU ALA GLY THR LEU SEQRES 22 B 362 ALA TYR TYR GLU ILE CYS ASP PHE LEU ARG GLY ALA THR SEQRES 23 B 362 VAL HIS ARG ILE LEU GLY GLN GLN VAL PRO TYR ALA THR SEQRES 24 B 362 LYS GLY ASN GLN TRP VAL GLY TYR ASP ASP GLN GLU SER SEQRES 25 B 362 VAL LYS SER LYS VAL GLN TYR LEU LYS ASP ARG GLN LEU SEQRES 26 B 362 ALA GLY ALA MET VAL TRP ALA LEU ASP LEU ASP ASP PHE SEQRES 27 B 362 GLN GLY SER PHE CYS GLY GLN ASP LEU ARG PHE PRO LEU SEQRES 28 B 362 THR ASN ALA ILE LYS ASP ALA LEU ALA ALA THR SEQRES 1 K 222 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 K 222 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 K 222 PHE THR PHE SER ASN TYR ALA MET SER TRP VAL ARG GLN SEQRES 4 K 222 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER GLY ILE SER SEQRES 5 K 222 GLY SER GLY GLY THR THR TYR TYR ALA ASP SER VAL LYS SEQRES 6 K 222 GLY ARG PHE THR ILE SER ARG ASP ASN SER LYS ASN THR SEQRES 7 K 222 LEU TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 K 222 ALA VAL TYR TYR CYS ALA GLY VAL GLY THR PHE ASP VAL SEQRES 9 K 222 TRP GLY GLN GLY THR LEU VAL THR VAL SER SER ALA SER SEQRES 10 K 222 THR ALA LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SEQRES 11 K 222 SER LYS SER THR SER GLY GLY THR ALA ALA LEU GLY CYS SEQRES 12 K 222 LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER SEQRES 13 K 222 TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS THR PHE SEQRES 14 K 222 PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SEQRES 15 K 222 SER VAL VAL THR VAL PRO SER SER SER LEU GLY THR GLN SEQRES 16 K 222 THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR SEQRES 17 K 222 LYS VAL ASP LYS LYS VAL GLU PRO LYS SER CYS ASP LYS SEQRES 18 K 222 THR SEQRES 1 L 215 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 L 215 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 L 215 GLN THR ILE SER SER TRP LEU ASN TRP TYR GLN GLN LYS SEQRES 4 L 215 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR ALA ALA SER SEQRES 5 L 215 ARG LEU GLN SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 215 GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 L 215 GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN SER SEQRES 8 L 215 TYR SER THR PRO LEU THR PHE GLY GLN GLY THR LYS VAL SEQRES 9 L 215 GLU ILE LYS ALA SER THR VAL ALA ALA PRO SER VAL PHE SEQRES 10 L 215 ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR SEQRES 11 L 215 ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG SEQRES 12 L 215 GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SEQRES 13 L 215 SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER SEQRES 14 L 215 LYS ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SEQRES 15 L 215 SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS SEQRES 16 L 215 GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SEQRES 17 L 215 SER PHE ASN ARG GLY GLU CYS HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET NAG F 1 14 HET NAG F 2 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 7 NAG 4(C8 H15 N O6) FORMUL 7 BMA C6 H12 O6 FORMUL 9 HOH *209(H2 O) HELIX 1 AA1 THR C 28 TYR C 32 5 5 HELIX 2 AA2 ASP C 62 LYS C 65 5 4 HELIX 3 AA3 ARG C 87 THR C 91 5 5 HELIX 4 AA4 PRO C 188 LEU C 192 5 5 HELIX 5 AA5 GLN D 79 PHE D 83 5 5 HELIX 6 AA6 SER D 122 LYS D 127 1 6 HELIX 7 AA7 LYS D 184 HIS D 190 1 7 HELIX 8 AA8 TRP A 10 ARG A 14 5 5 HELIX 9 AA9 GLU A 15 SER A 19 5 5 HELIX 10 AB1 PHE A 21 LEU A 25 5 5 HELIX 11 AB2 ASN A 51 ASN A 66 1 16 HELIX 12 AB3 GLY A 81 ASN A 91 1 11 HELIX 13 AB4 ASN A 91 GLY A 110 1 20 HELIX 14 AB5 GLY A 122 ARG A 124 5 3 HELIX 15 AB6 ASP A 125 ALA A 144 1 20 HELIX 16 AB7 GLY A 160 TYR A 168 1 9 HELIX 17 AB8 ASP A 169 LEU A 177 1 9 HELIX 18 AB9 GLN A 205 SER A 209 5 5 HELIX 19 AC1 ASN A 215 LEU A 226 1 12 HELIX 20 AC2 PRO A 229 SER A 231 5 3 HELIX 21 AC3 ALA A 274 LEU A 282 1 9 HELIX 22 AC4 ASP A 309 ARG A 323 1 15 HELIX 23 AC5 ALA A 332 ASP A 336 5 5 HELIX 24 AC6 PHE A 349 ALA A 361 1 13 HELIX 25 AC7 TRP B 10 ARG B 14 5 5 HELIX 26 AC8 GLU B 15 SER B 19 5 5 HELIX 27 AC9 PHE B 21 LEU B 25 5 5 HELIX 28 AD1 ASN B 51 THR B 61 1 11 HELIX 29 AD2 LEU B 62 ASN B 64 5 3 HELIX 30 AD3 TRP B 78 PHE B 80 5 3 HELIX 31 AD4 GLY B 81 ASN B 91 1 11 HELIX 32 AD5 ASN B 91 GLY B 110 1 20 HELIX 33 AD6 GLY B 122 ARG B 124 5 3 HELIX 34 AD7 ASP B 125 GLU B 143 1 19 HELIX 35 AD8 GLY B 160 TYR B 168 1 9 HELIX 36 AD9 ASP B 169 LEU B 177 1 9 HELIX 37 AE1 GLN B 205 SER B 209 5 5 HELIX 38 AE2 ASN B 215 GLY B 227 1 13 HELIX 39 AE3 PRO B 229 SER B 231 5 3 HELIX 40 AE4 TYR B 275 ARG B 283 1 9 HELIX 41 AE5 ASP B 309 ARG B 323 1 15 HELIX 42 AE6 ALA B 332 ASP B 336 5 5 HELIX 43 AE7 PHE B 349 ALA B 361 1 13 HELIX 44 AE8 THR K 28 TYR K 32 5 5 HELIX 45 AE9 ARG K 87 THR K 91 5 5 HELIX 46 AF1 GLN L 79 PHE L 83 5 5 HELIX 47 AF2 SER L 122 GLY L 129 1 8 SHEET 1 AA1 4 GLN C 3 SER C 7 0 SHEET 2 AA1 4 LEU C 18 SER C 25 -1 O SER C 21 N SER C 7 SHEET 3 AA1 4 THR C 78 MET C 83 -1 O MET C 83 N LEU C 18 SHEET 4 AA1 4 PHE C 68 ASP C 73 -1 N SER C 71 O TYR C 80 SHEET 1 AA2 6 LEU C 11 VAL C 12 0 SHEET 2 AA2 6 THR C 109 VAL C 113 1 O THR C 112 N VAL C 12 SHEET 3 AA2 6 ALA C 92 VAL C 99 -1 N TYR C 94 O THR C 109 SHEET 4 AA2 6 MET C 34 GLN C 39 -1 N VAL C 37 O TYR C 95 SHEET 5 AA2 6 LEU C 45 ILE C 51 -1 O GLU C 46 N ARG C 38 SHEET 6 AA2 6 THR C 58 TYR C 60 -1 O TYR C 59 N GLY C 50 SHEET 1 AA3 4 LEU C 11 VAL C 12 0 SHEET 2 AA3 4 THR C 109 VAL C 113 1 O THR C 112 N VAL C 12 SHEET 3 AA3 4 ALA C 92 VAL C 99 -1 N TYR C 94 O THR C 109 SHEET 4 AA3 4 PHE C 102 TRP C 105 -1 O PHE C 102 N VAL C 99 SHEET 1 AA4 4 SER C 123 PRO C 126 0 SHEET 2 AA4 4 ALA C 139 TYR C 148 -1 O LEU C 144 N PHE C 125 SHEET 3 AA4 4 TYR C 179 VAL C 187 -1 O TYR C 179 N TYR C 148 SHEET 4 AA4 4 HIS C 167 THR C 168 -1 N HIS C 167 O VAL C 184 SHEET 1 AA5 4 SER C 123 PRO C 126 0 SHEET 2 AA5 4 ALA C 139 TYR C 148 -1 O LEU C 144 N PHE C 125 SHEET 3 AA5 4 TYR C 179 VAL C 187 -1 O TYR C 179 N TYR C 148 SHEET 4 AA5 4 VAL C 172 LEU C 173 -1 N VAL C 172 O SER C 180 SHEET 1 AA6 3 THR C 154 TRP C 157 0 SHEET 2 AA6 3 ILE C 198 HIS C 203 -1 O ASN C 200 N SER C 156 SHEET 3 AA6 3 THR C 208 LYS C 213 -1 O VAL C 210 N VAL C 201 SHEET 1 AA7 4 MET D 4 SER D 7 0 SHEET 2 AA7 4 VAL D 19 ALA D 25 -1 O ARG D 24 N THR D 5 SHEET 3 AA7 4 ASP D 70 ILE D 75 -1 O LEU D 73 N ILE D 21 SHEET 4 AA7 4 PHE D 62 GLY D 66 -1 N SER D 65 O THR D 72 SHEET 1 AA8 6 SER D 10 SER D 14 0 SHEET 2 AA8 6 THR D 102 LYS D 107 1 O LYS D 107 N ALA D 13 SHEET 3 AA8 6 ALA D 84 GLN D 90 -1 N ALA D 84 O VAL D 104 SHEET 4 AA8 6 LEU D 33 GLN D 38 -1 N TYR D 36 O TYR D 87 SHEET 5 AA8 6 LYS D 45 TYR D 49 -1 O LYS D 45 N GLN D 37 SHEET 6 AA8 6 ARG D 53 LEU D 54 -1 O ARG D 53 N TYR D 49 SHEET 1 AA9 4 SER D 10 SER D 14 0 SHEET 2 AA9 4 THR D 102 LYS D 107 1 O LYS D 107 N ALA D 13 SHEET 3 AA9 4 ALA D 84 GLN D 90 -1 N ALA D 84 O VAL D 104 SHEET 4 AA9 4 THR D 97 PHE D 98 -1 O THR D 97 N GLN D 90 SHEET 1 AB1 4 SER D 115 PHE D 119 0 SHEET 2 AB1 4 THR D 130 PHE D 140 -1 O VAL D 134 N PHE D 119 SHEET 3 AB1 4 TYR D 174 SER D 183 -1 O TYR D 174 N PHE D 140 SHEET 4 AB1 4 SER D 160 VAL D 164 -1 N SER D 163 O SER D 177 SHEET 1 AB2 3 LYS D 146 VAL D 151 0 SHEET 2 AB2 3 TYR D 193 THR D 198 -1 O GLU D 196 N GLN D 148 SHEET 3 AB2 3 VAL D 206 PHE D 210 -1 O VAL D 206 N VAL D 197 SHEET 1 AB310 HIS A 44 THR A 47 0 SHEET 2 AB310 HIS A 32 SER A 41 -1 N SER A 41 O HIS A 44 SHEET 3 AB310 LYS A 70 GLY A 76 1 O SER A 74 N TYR A 35 SHEET 4 AB310 GLY A 113 ALA A 117 1 O ALA A 117 N VAL A 75 SHEET 5 AB310 LEU A 152 SER A 158 1 O SER A 154 N LEU A 116 SHEET 6 AB310 PHE A 179 MET A 183 1 O MET A 183 N LEU A 157 SHEET 7 AB310 LEU A 233 PRO A 238 1 O VAL A 234 N ILE A 180 SHEET 8 AB310 GLY A 327 TRP A 331 1 O MET A 329 N ILE A 237 SHEET 9 AB310 LYS A 2 THR A 8 1 N VAL A 4 O VAL A 330 SHEET 10 AB310 HIS A 32 SER A 41 1 O ILE A 34 N TYR A 7 SHEET 1 AB4 3 ILE A 257 PRO A 260 0 SHEET 2 AB4 3 GLY A 241 LEU A 246 -1 N THR A 245 O GLY A 259 SHEET 3 AB4 3 THR A 272 LEU A 273 -1 O LEU A 273 N GLY A 241 SHEET 1 AB5 5 ILE A 257 PRO A 260 0 SHEET 2 AB5 5 GLY A 241 LEU A 246 -1 N THR A 245 O GLY A 259 SHEET 3 AB5 5 GLN A 303 GLY A 306 -1 O TRP A 304 N PHE A 244 SHEET 4 AB5 5 VAL A 295 LYS A 300 -1 N ALA A 298 O VAL A 305 SHEET 5 AB5 5 THR A 286 ILE A 290 -1 N ILE A 290 O VAL A 295 SHEET 1 AB610 HIS B 44 THR B 47 0 SHEET 2 AB610 HIS B 32 SER B 41 -1 N ASN B 39 O ASP B 46 SHEET 3 AB610 LYS B 70 GLY B 76 1 O SER B 74 N TYR B 35 SHEET 4 AB610 GLY B 113 ALA B 117 1 O ASP B 115 N VAL B 75 SHEET 5 AB610 LEU B 152 SER B 158 1 O ALA B 156 N LEU B 116 SHEET 6 AB610 PHE B 179 MET B 183 1 O MET B 183 N LEU B 157 SHEET 7 AB610 LEU B 233 PRO B 238 1 O VAL B 234 N ILE B 180 SHEET 8 AB610 GLY B 327 TRP B 331 1 O MET B 329 N ILE B 237 SHEET 9 AB610 LYS B 2 THR B 8 1 N VAL B 4 O VAL B 330 SHEET 10 AB610 HIS B 32 SER B 41 1 O ILE B 34 N CYS B 5 SHEET 1 AB7 3 ILE B 257 PRO B 260 0 SHEET 2 AB7 3 PHE B 240 LEU B 246 -1 N THR B 245 O GLY B 259 SHEET 3 AB7 3 THR B 272 ALA B 274 -1 O LEU B 273 N GLY B 241 SHEET 1 AB8 5 ILE B 257 PRO B 260 0 SHEET 2 AB8 5 PHE B 240 LEU B 246 -1 N THR B 245 O GLY B 259 SHEET 3 AB8 5 GLN B 303 GLY B 306 -1 O TRP B 304 N PHE B 244 SHEET 4 AB8 5 PRO B 296 LYS B 300 -1 N ALA B 298 O VAL B 305 SHEET 5 AB8 5 THR B 286 ARG B 289 -1 N HIS B 288 O TYR B 297 SHEET 1 AB9 4 GLN K 3 SER K 7 0 SHEET 2 AB9 4 LEU K 18 SER K 25 -1 O SER K 25 N GLN K 3 SHEET 3 AB9 4 THR K 78 MET K 83 -1 O LEU K 81 N LEU K 20 SHEET 4 AB9 4 PHE K 68 ASP K 73 -1 N SER K 71 O TYR K 80 SHEET 1 AC1 6 GLY K 10 VAL K 12 0 SHEET 2 AC1 6 THR K 109 VAL K 113 1 O THR K 112 N GLY K 10 SHEET 3 AC1 6 ALA K 92 VAL K 99 -1 N TYR K 94 O THR K 109 SHEET 4 AC1 6 MET K 34 GLN K 39 -1 N VAL K 37 O TYR K 95 SHEET 5 AC1 6 GLU K 46 ILE K 51 -1 O GLU K 46 N ARG K 38 SHEET 6 AC1 6 THR K 58 TYR K 60 -1 O TYR K 59 N GLY K 50 SHEET 1 AC2 4 GLY K 10 VAL K 12 0 SHEET 2 AC2 4 THR K 109 VAL K 113 1 O THR K 112 N GLY K 10 SHEET 3 AC2 4 ALA K 92 VAL K 99 -1 N TYR K 94 O THR K 109 SHEET 4 AC2 4 PHE K 102 TRP K 105 -1 O PHE K 102 N VAL K 99 SHEET 1 AC3 4 SER K 123 PRO K 126 0 SHEET 2 AC3 4 CYS K 143 TYR K 148 -1 O LYS K 146 N SER K 123 SHEET 3 AC3 4 TYR K 179 VAL K 184 -1 O SER K 183 N CYS K 143 SHEET 4 AC3 4 HIS K 167 THR K 168 -1 N HIS K 167 O VAL K 184 SHEET 1 AC4 4 SER K 123 PRO K 126 0 SHEET 2 AC4 4 CYS K 143 TYR K 148 -1 O LYS K 146 N SER K 123 SHEET 3 AC4 4 TYR K 179 VAL K 184 -1 O SER K 183 N CYS K 143 SHEET 4 AC4 4 VAL K 172 LEU K 173 -1 N VAL K 172 O SER K 180 SHEET 1 AC5 2 ASN K 202 HIS K 203 0 SHEET 2 AC5 2 THR K 208 LYS K 209 -1 O THR K 208 N HIS K 203 SHEET 1 AC6 4 MET L 4 SER L 7 0 SHEET 2 AC6 4 VAL L 19 ALA L 25 -1 O THR L 22 N SER L 7 SHEET 3 AC6 4 ASP L 70 ILE L 75 -1 O LEU L 73 N ILE L 21 SHEET 4 AC6 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 AC7 6 SER L 10 SER L 14 0 SHEET 2 AC7 6 THR L 102 LYS L 107 1 O LYS L 107 N ALA L 13 SHEET 3 AC7 6 ALA L 84 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 AC7 6 LEU L 33 GLN L 38 -1 N ASN L 34 O GLN L 89 SHEET 5 AC7 6 LYS L 45 TYR L 49 -1 O ILE L 48 N TRP L 35 SHEET 6 AC7 6 ARG L 53 LEU L 54 -1 O ARG L 53 N TYR L 49 SHEET 1 AC8 4 SER L 10 SER L 14 0 SHEET 2 AC8 4 THR L 102 LYS L 107 1 O LYS L 107 N ALA L 13 SHEET 3 AC8 4 ALA L 84 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 AC8 4 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SHEET 1 AC9 4 SER L 115 PHE L 119 0 SHEET 2 AC9 4 THR L 130 PHE L 140 -1 O ASN L 138 N SER L 115 SHEET 3 AC9 4 TYR L 174 SER L 183 -1 O TYR L 174 N PHE L 140 SHEET 4 AC9 4 GLN L 161 VAL L 164 -1 N SER L 163 O SER L 177 SHEET 1 AD1 3 LYS L 146 LYS L 150 0 SHEET 2 AD1 3 ALA L 194 THR L 198 -1 O GLU L 196 N GLN L 148 SHEET 3 AD1 3 VAL L 206 LYS L 208 -1 O LYS L 208 N CYS L 195 SSBOND 1 CYS C 22 CYS C 96 1555 1555 2.11 SSBOND 2 CYS C 143 CYS C 199 1555 1555 2.03 SSBOND 3 CYS D 23 CYS D 88 1555 1555 2.13 SSBOND 4 CYS D 135 CYS D 195 1555 1555 2.02 SSBOND 5 CYS A 5 CYS A 30 1555 1555 2.10 SSBOND 6 CYS A 279 CYS A 343 1555 1555 2.04 SSBOND 7 CYS B 5 CYS B 30 1555 1555 2.06 SSBOND 8 CYS B 279 CYS B 343 1555 1555 2.07 SSBOND 9 CYS K 22 CYS K 96 1555 1555 2.08 SSBOND 10 CYS L 23 CYS L 88 1555 1555 2.20 SSBOND 11 CYS L 135 CYS L 195 1555 1555 2.04 LINK ND2 ASN A 39 C1 NAG E 1 1555 1555 1.43 LINK ND2 ASN B 39 C1 NAG F 1 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.43 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.39 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.41 CISPEP 1 PHE C 149 PRO C 150 0 -4.39 CISPEP 2 SER D 7 PRO D 8 0 -3.64 CISPEP 3 THR D 94 PRO D 95 0 -2.23 CISPEP 4 TYR D 141 PRO D 142 0 3.65 CISPEP 5 SER A 36 PHE A 37 0 5.13 CISPEP 6 LEU A 119 TYR A 120 0 -5.73 CISPEP 7 TRP A 331 ALA A 332 0 -1.37 CISPEP 8 SER B 36 PHE B 37 0 10.93 CISPEP 9 LEU B 119 TYR B 120 0 -5.35 CISPEP 10 TRP B 331 ALA B 332 0 -0.83 CISPEP 11 PHE K 149 PRO K 150 0 -6.69 CISPEP 12 SER L 7 PRO L 8 0 -0.81 CISPEP 13 THR L 94 PRO L 95 0 -3.53 CISPEP 14 TYR L 141 PRO L 142 0 12.96 CRYST1 89.583 132.526 160.007 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011163 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007546 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006250 0.00000