HEADER SIGNALING PROTEIN 22-JUL-20 7CLX TITLE CRYSTAL STRUCTURE OF THE DOCK8 DHR-1 DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: DEDICATOR OF CYTOKINESIS PROTEIN 8; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: DOCK8; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: CELL-FREE PROTEIN SYNTHESIS KEYWDS GUANINE NUCLEOTIDE EXCHANGE FACTOR, DOCK, RHO GTPASE, CDC42, KEYWDS 2 MEMBRANE, PHOSPHOINOSITIDE, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.KUKIMOTO-NIINO,M.SHIROUZU,S.YOKOYAMA,Y.FUKUI,T.URUNO REVDAT 3 27-MAR-24 7CLX 1 REMARK REVDAT 2 17-MAR-21 7CLX 1 JRNL REVDAT 1 10-FEB-21 7CLX 0 JRNL AUTH T.SAKURAI,M.KUKIMOTO-NIINO,K.KUNIMURA,N.YAMANE,D.SAKATA, JRNL AUTH 2 R.AIHARA,T.YASUDA,S.YOKOYAMA,M.SHIROUZU,Y.FUKUI,T.URUNO JRNL TITL A CONSERVED PI(4,5)P2-BINDING DOMAIN IS CRITICAL FOR IMMUNE JRNL TITL 2 REGULATORY FUNCTION OF DOCK8. JRNL REF LIFE SCI ALLIANCE V. 4 2021 JRNL REFN ESSN 2575-1077 JRNL PMID 33574036 JRNL DOI 10.26508/LSA.202000873 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.15 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 32634 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 1668 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.1538 - 3.4285 1.00 2787 138 0.1617 0.1697 REMARK 3 2 3.4285 - 2.7217 1.00 2649 135 0.1658 0.1856 REMARK 3 3 2.7217 - 2.3778 1.00 2610 136 0.1849 0.2336 REMARK 3 4 2.3778 - 2.1604 1.00 2575 157 0.1704 0.1933 REMARK 3 5 2.1604 - 2.0056 1.00 2570 139 0.1677 0.1901 REMARK 3 6 2.0056 - 1.8873 1.00 2546 152 0.1614 0.1929 REMARK 3 7 1.8873 - 1.7928 1.00 2579 139 0.1819 0.2156 REMARK 3 8 1.7928 - 1.7148 1.00 2533 138 0.1969 0.2131 REMARK 3 9 1.7148 - 1.6488 1.00 2560 121 0.1961 0.2181 REMARK 3 10 1.6488 - 1.5919 1.00 2544 136 0.2173 0.2359 REMARK 3 11 1.5919 - 1.5421 1.00 2528 135 0.2269 0.2723 REMARK 3 12 1.5421 - 1.4980 0.98 2485 142 0.2570 0.2853 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.080 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 1481 REMARK 3 ANGLE : 0.848 2015 REMARK 3 CHIRALITY : 0.082 221 REMARK 3 PLANARITY : 0.005 257 REMARK 3 DIHEDRAL : 15.691 543 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 557 THROUGH 571 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.9311 6.8458 -2.9144 REMARK 3 T TENSOR REMARK 3 T11: 0.1664 T22: 0.1516 REMARK 3 T33: 0.1927 T12: -0.0104 REMARK 3 T13: -0.0013 T23: 0.0294 REMARK 3 L TENSOR REMARK 3 L11: 1.1202 L22: 2.0241 REMARK 3 L33: 2.1208 L12: 0.5468 REMARK 3 L13: -1.2383 L23: -0.5570 REMARK 3 S TENSOR REMARK 3 S11: 0.0963 S12: -0.1635 S13: 0.0424 REMARK 3 S21: 0.0682 S22: -0.1550 S23: -0.1218 REMARK 3 S31: -0.1702 S32: 0.2296 S33: 0.0123 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 572 THROUGH 590 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.9737 -8.6923 2.2263 REMARK 3 T TENSOR REMARK 3 T11: 0.1880 T22: 0.1774 REMARK 3 T33: 0.2038 T12: -0.0281 REMARK 3 T13: 0.0441 T23: -0.0116 REMARK 3 L TENSOR REMARK 3 L11: 4.2535 L22: 2.3739 REMARK 3 L33: 4.3524 L12: 1.2174 REMARK 3 L13: -3.1928 L23: -0.0902 REMARK 3 S TENSOR REMARK 3 S11: 0.0182 S12: -0.7351 S13: 0.0546 REMARK 3 S21: 0.3502 S22: -0.1703 S23: 0.4302 REMARK 3 S31: 0.1603 S32: 0.0088 S33: 0.0740 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 591 THROUGH 607 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.8144 -5.8388 -4.4261 REMARK 3 T TENSOR REMARK 3 T11: 0.1075 T22: 0.1083 REMARK 3 T33: 0.1208 T12: 0.0013 REMARK 3 T13: 0.0049 T23: 0.0277 REMARK 3 L TENSOR REMARK 3 L11: 5.4839 L22: 6.3514 REMARK 3 L33: 7.4383 L12: 1.3217 REMARK 3 L13: 2.5813 L23: 2.4804 REMARK 3 S TENSOR REMARK 3 S11: 0.1701 S12: -0.0485 S13: 0.0864 REMARK 3 S21: 0.3089 S22: -0.0051 S23: -0.2677 REMARK 3 S31: 0.2510 S32: 0.0358 S33: -0.1708 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 608 THROUGH 631 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.3985 0.2044 6.4312 REMARK 3 T TENSOR REMARK 3 T11: 0.1846 T22: 0.1730 REMARK 3 T33: 0.1508 T12: 0.0339 REMARK 3 T13: -0.0006 T23: -0.0233 REMARK 3 L TENSOR REMARK 3 L11: 1.6582 L22: 3.0070 REMARK 3 L33: 1.5491 L12: -2.1102 REMARK 3 L13: -1.2442 L23: 0.3949 REMARK 3 S TENSOR REMARK 3 S11: -0.1591 S12: -0.2594 S13: 0.1133 REMARK 3 S21: 0.3788 S22: 0.2101 S23: -0.0288 REMARK 3 S31: -0.1256 S32: 0.0266 S33: -0.0321 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 632 THROUGH 653 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.5070 -4.6410 -7.4005 REMARK 3 T TENSOR REMARK 3 T11: 0.0773 T22: 0.0779 REMARK 3 T33: 0.1122 T12: 0.0133 REMARK 3 T13: 0.0018 T23: 0.0252 REMARK 3 L TENSOR REMARK 3 L11: 2.6563 L22: 2.6049 REMARK 3 L33: 3.1015 L12: 0.9756 REMARK 3 L13: -0.0218 L23: -0.4148 REMARK 3 S TENSOR REMARK 3 S11: 0.0164 S12: -0.0341 S13: -0.0639 REMARK 3 S21: -0.0817 S22: 0.0732 S23: 0.0776 REMARK 3 S31: 0.1124 S32: -0.0692 S33: -0.0476 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 654 THROUGH 663 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.6793 -25.1379 10.8055 REMARK 3 T TENSOR REMARK 3 T11: 1.2448 T22: 0.8756 REMARK 3 T33: 0.9497 T12: 0.0175 REMARK 3 T13: 0.3589 T23: 0.1825 REMARK 3 L TENSOR REMARK 3 L11: 4.4677 L22: 8.7365 REMARK 3 L33: 4.9707 L12: 3.1472 REMARK 3 L13: -1.5971 L23: 0.7105 REMARK 3 S TENSOR REMARK 3 S11: 0.0845 S12: 1.3676 S13: 0.7175 REMARK 3 S21: 0.6774 S22: 0.8563 S23: 1.2326 REMARK 3 S31: -0.3224 S32: -0.4040 S33: -0.8028 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 664 THROUGH 673 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.0625 -12.0711 -4.9807 REMARK 3 T TENSOR REMARK 3 T11: 0.1692 T22: 0.1399 REMARK 3 T33: 0.1654 T12: -0.0292 REMARK 3 T13: -0.0149 T23: 0.0255 REMARK 3 L TENSOR REMARK 3 L11: 3.3573 L22: 4.9781 REMARK 3 L33: 6.3346 L12: 0.3355 REMARK 3 L13: -0.4482 L23: -2.6995 REMARK 3 S TENSOR REMARK 3 S11: 0.0021 S12: -0.2211 S13: -0.2984 REMARK 3 S21: 0.1827 S22: 0.0670 S23: 0.0122 REMARK 3 S31: 0.3788 S32: -0.1302 S33: -0.0288 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 674 THROUGH 687 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.7031 2.1469 -15.3639 REMARK 3 T TENSOR REMARK 3 T11: 0.2050 T22: 0.2696 REMARK 3 T33: 0.2385 T12: -0.0133 REMARK 3 T13: -0.0282 T23: 0.0951 REMARK 3 L TENSOR REMARK 3 L11: 4.3080 L22: 2.2617 REMARK 3 L33: 1.8984 L12: 0.9835 REMARK 3 L13: -1.1126 L23: 0.0472 REMARK 3 S TENSOR REMARK 3 S11: -0.0714 S12: 0.8464 S13: 0.3791 REMARK 3 S21: -0.3941 S22: 0.1635 S23: 0.2828 REMARK 3 S31: -0.1341 S32: -0.3172 S33: -0.2274 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 688 THROUGH 715 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.0520 -14.4725 -14.8135 REMARK 3 T TENSOR REMARK 3 T11: 0.1917 T22: 0.2336 REMARK 3 T33: 0.1934 T12: -0.0321 REMARK 3 T13: -0.0045 T23: -0.0099 REMARK 3 L TENSOR REMARK 3 L11: 4.8981 L22: 2.1955 REMARK 3 L33: 3.6592 L12: 2.3235 REMARK 3 L13: -1.4273 L23: 0.9227 REMARK 3 S TENSOR REMARK 3 S11: -0.2375 S12: 0.6488 S13: -0.3099 REMARK 3 S21: -0.2546 S22: 0.1150 S23: -0.0175 REMARK 3 S31: 0.2060 S32: -0.2875 S33: 0.0797 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 716 THROUGH 736 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.5167 2.7209 -5.1148 REMARK 3 T TENSOR REMARK 3 T11: 0.1358 T22: 0.1636 REMARK 3 T33: 0.1600 T12: 0.0071 REMARK 3 T13: -0.0215 T23: 0.0386 REMARK 3 L TENSOR REMARK 3 L11: 1.2172 L22: 0.6463 REMARK 3 L33: 1.4157 L12: -0.3714 REMARK 3 L13: -1.3422 L23: 0.1134 REMARK 3 S TENSOR REMARK 3 S11: 0.2080 S12: -0.1333 S13: 0.5524 REMARK 3 S21: 0.1175 S22: -0.1342 S23: 0.2732 REMARK 3 S31: -0.1119 S32: 0.0853 S33: -0.0698 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7CLX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 29-JUL-20. REMARK 100 THE DEPOSITION ID IS D_1300011418. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32687 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 12.90 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 35.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, DI-SODIUM HYDROGEN REMARK 280 PHOSPHATE, PH 8.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 24.74350 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 44.63750 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 44.63750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 12.37175 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 44.63750 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 44.63750 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 37.11525 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 44.63750 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 44.63750 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 12.37175 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 44.63750 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 44.63750 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 37.11525 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 24.74350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 890 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 904 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1030 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1031 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 549 REMARK 465 SER A 550 REMARK 465 SER A 551 REMARK 465 GLY A 552 REMARK 465 SER A 553 REMARK 465 SER A 554 REMARK 465 GLY A 555 REMARK 465 PRO A 556 REMARK 465 ASP A 737 REMARK 465 ASN A 738 REMARK 465 HIS A 739 REMARK 465 LEU A 740 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 819 O HOH A 867 2.00 REMARK 500 O HOH A 814 O HOH A 949 2.03 REMARK 500 O HOH A 830 O HOH A 1004 2.08 REMARK 500 O HOH A 810 O HOH A 992 2.09 REMARK 500 OE1 GLU A 726 O HOH A 801 2.12 REMARK 500 O HOH A 1008 O HOH A 1011 2.13 REMARK 500 O HOH A 825 O HOH A 976 2.15 REMARK 500 O HOH A 950 O HOH A 990 2.15 REMARK 500 O HOH A 804 O HOH A 1006 2.16 REMARK 500 O HOH A 953 O HOH A 970 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 829 O HOH A 829 7555 1.81 REMARK 500 O HOH A 939 O HOH A 996 3455 1.88 REMARK 500 O HOH A 996 O HOH A 1001 5444 1.97 REMARK 500 O HOH A 821 O HOH A 881 7555 2.06 REMARK 500 O HOH A 921 O HOH A 1029 7555 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 692 -54.11 77.42 REMARK 500 HIS A 719 17.17 86.38 REMARK 500 THR A 735 54.04 -103.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7CLY RELATED DB: PDB REMARK 900 7CLY CONTAINS THE SAME PROTEIN CRYSTALLIZED WITH DI-C8- REMARK 900 PHOSPHATIDYLINOSITOL-(4,5)-BISPHOSPHATE. DBREF 7CLX A 556 740 UNP Q8C147 DOCK8_MOUSE 556 740 SEQADV 7CLX GLY A 549 UNP Q8C147 EXPRESSION TAG SEQADV 7CLX SER A 550 UNP Q8C147 EXPRESSION TAG SEQADV 7CLX SER A 551 UNP Q8C147 EXPRESSION TAG SEQADV 7CLX GLY A 552 UNP Q8C147 EXPRESSION TAG SEQADV 7CLX SER A 553 UNP Q8C147 EXPRESSION TAG SEQADV 7CLX SER A 554 UNP Q8C147 EXPRESSION TAG SEQADV 7CLX GLY A 555 UNP Q8C147 EXPRESSION TAG SEQRES 1 A 192 GLY SER SER GLY SER SER GLY PRO HIS THR VAL TYR ARG SEQRES 2 A 192 ASN LEU LEU TYR VAL TYR PRO GLN ARG LEU ASN PHE ALA SEQRES 3 A 192 SER LYS LEU ALA SER ALA ARG ASN ILE THR ILE LYS ILE SEQRES 4 A 192 GLN PHE MET CYS GLY GLU ASP PRO SER ASN ALA MET PRO SEQRES 5 A 192 VAL ILE PHE GLY LYS SER SER GLY PRO GLU PHE LEU GLN SEQRES 6 A 192 GLU VAL TYR THR ALA ILE THR TYR HIS ASN LYS SER PRO SEQRES 7 A 192 ASP PHE TYR GLU GLU VAL LYS ILE LYS LEU PRO ALA LYS SEQRES 8 A 192 LEU THR VAL ASN HIS HIS LEU LEU PHE THR PHE TYR HIS SEQRES 9 A 192 ILE SER CYS GLN GLN LYS GLN GLY ALA SER GLY GLU SER SEQRES 10 A 192 LEU LEU GLY TYR SER TRP LEU PRO ILE LEU LEU ASN GLU SEQRES 11 A 192 ARG LEU GLN THR GLY SER TYR CYS LEU PRO VAL ALA LEU SEQRES 12 A 192 GLU LYS LEU PRO PRO ASN TYR SER ILE HIS SER ALA GLU SEQRES 13 A 192 LYS VAL PRO LEU GLN ASN PRO PRO ILE LYS TRP ALA GLU SEQRES 14 A 192 GLY HIS LYS GLY VAL PHE ASN ILE GLU VAL GLN ALA VAL SEQRES 15 A 192 SER SER VAL HIS THR GLN ASP ASN HIS LEU FORMUL 2 HOH *234(H2 O) HELIX 1 AA1 SER A 579 ILE A 583 5 5 HELIX 2 AA2 ASP A 594 ALA A 598 5 5 HELIX 3 AA3 GLN A 657 ALA A 661 5 5 HELIX 4 AA4 ASN A 697 HIS A 701 5 5 HELIX 5 AA5 TRP A 715 LYS A 720 5 6 SHEET 1 AA1 4 VAL A 632 LYS A 635 0 SHEET 2 AA1 4 VAL A 559 LEU A 571 -1 N VAL A 566 O VAL A 632 SHEET 3 AA1 4 PHE A 723 HIS A 734 -1 O HIS A 734 N VAL A 559 SHEET 4 AA1 4 GLY A 683 LEU A 687 -1 N GLY A 683 O VAL A 727 SHEET 1 AA2 5 VAL A 615 THR A 617 0 SHEET 2 AA2 5 THR A 584 MET A 590 -1 N ILE A 585 O THR A 617 SHEET 3 AA2 5 HIS A 645 ILE A 653 -1 O THR A 649 N LYS A 586 SHEET 4 AA2 5 GLU A 664 PRO A 673 -1 O LEU A 667 N PHE A 650 SHEET 5 AA2 5 ALA A 690 LEU A 691 -1 O ALA A 690 N TYR A 669 SHEET 1 AA3 2 ILE A 602 PHE A 603 0 SHEET 2 AA3 2 PHE A 611 LEU A 612 -1 O LEU A 612 N ILE A 602 SHEET 1 AA4 2 LEU A 675 LEU A 676 0 SHEET 2 AA4 2 ARG A 679 LEU A 680 -1 O ARG A 679 N LEU A 676 CISPEP 1 GLY A 608 PRO A 609 0 0.26 CISPEP 2 ASN A 710 PRO A 711 0 2.86 CRYST1 89.275 89.275 49.487 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011201 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011201 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020207 0.00000