HEADER HYDROLASE 28-JUL-20 7CMO TITLE CRYSTAL STRUCTURE OF HUMAN INORGANIC PYROPHOSPHATASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: INORGANIC PYROPHOSPHATASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: PYROPHOSPHATE PHOSPHO-HYDROLASE,PPASE; COMPND 5 EC: 3.6.1.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PPA1, IOPPP, PP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS COMPLEX, MONOMER, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR F.HU,Z.HUANG,L.LI REVDAT 3 29-NOV-23 7CMO 1 REMARK REVDAT 2 30-DEC-20 7CMO 1 JRNL REVDAT 1 21-OCT-20 7CMO 0 JRNL AUTH F.HU,Z.HUANG,S.ZHENG,Q.WU,Y.CHEN,H.LIN,W.HUANG,L.LI JRNL TITL STRUCTURAL AND BIOCHEMICAL CHARACTERIZATION OF INORGANIC JRNL TITL 2 PYROPHOSPHATASE FROM HOMO SAPIENS. JRNL REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 533 1115 2020 JRNL REFN ESSN 1090-2104 JRNL PMID 33036755 JRNL DOI 10.1016/J.BBRC.2020.09.139 REMARK 2 REMARK 2 RESOLUTION. 3.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.06 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 20287 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.277 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1013 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.0600 - 6.5000 0.96 2854 149 0.1921 0.2327 REMARK 3 2 6.5000 - 5.1600 0.98 2790 147 0.2086 0.2858 REMARK 3 3 5.1600 - 4.5100 0.99 2743 144 0.1906 0.2497 REMARK 3 4 4.5100 - 4.1000 1.00 2777 146 0.2140 0.3039 REMARK 3 5 4.1000 - 3.8000 1.00 2739 145 0.2753 0.3187 REMARK 3 6 3.8000 - 3.5800 0.96 2628 138 0.2943 0.3228 REMARK 3 7 3.5800 - 3.4000 0.99 2743 144 0.3133 0.3580 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.540 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.500 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 105.8 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 6.0387 -1.2126 -39.0941 REMARK 3 T TENSOR REMARK 3 T11: 0.8961 T22: 1.0049 REMARK 3 T33: 0.9895 T12: 0.0184 REMARK 3 T13: 0.0776 T23: 0.0450 REMARK 3 L TENSOR REMARK 3 L11: 0.1216 L22: 0.2861 REMARK 3 L33: 0.6569 L12: -0.1389 REMARK 3 L13: 0.3829 L23: 0.0993 REMARK 3 S TENSOR REMARK 3 S11: -0.0894 S12: -0.0074 S13: 0.0580 REMARK 3 S21: 0.1149 S22: -0.0453 S23: 0.0160 REMARK 3 S31: 0.0837 S32: 0.1311 S33: 0.1360 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 24 THROUGH 44 OR REMARK 3 RESID 46 THROUGH 124 OR RESID 133 THROUGH REMARK 3 306)) REMARK 3 SELECTION : (CHAIN B AND (RESID 24 THROUGH 44 OR REMARK 3 RESID 46 THROUGH 124 OR RESID 133 THROUGH REMARK 3 306)) REMARK 3 ATOM PAIRS NUMBER : 3285 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 24 THROUGH 44 OR REMARK 3 RESID 46 THROUGH 124 OR RESID 133 THROUGH REMARK 3 306)) REMARK 3 SELECTION : (CHAIN C AND RESID 24 THROUGH 306) REMARK 3 ATOM PAIRS NUMBER : 3285 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 3 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 24 THROUGH 44 OR REMARK 3 RESID 46 THROUGH 124 OR RESID 133 THROUGH REMARK 3 306)) REMARK 3 SELECTION : (CHAIN D AND (RESID 24 THROUGH 44 OR REMARK 3 RESID 46 THROUGH 124 OR RESID 133 THROUGH REMARK 3 306)) REMARK 3 ATOM PAIRS NUMBER : 3285 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7CMO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-JUL-20. REMARK 100 THE DEPOSITION ID IS D_1300017852. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-NOV-17 REMARK 200 TEMPERATURE (KELVIN) : 200 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.987 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20300 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.597 REMARK 200 RESOLUTION RANGE LOW (A) : 48.970 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 3.050 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.52 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: 6C45 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20%PEG4K, 50MM LI2SO4,50 MM NA2SO4,PH REMARK 280 5.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.95250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 106.35350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 67.52050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 106.35350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.95250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 67.52050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 107 REMARK 465 ASP A 108 REMARK 465 LYS A 109 REMARK 465 HIS A 110 REMARK 465 THR A 111 REMARK 465 GLY A 112 REMARK 465 ASN A 289 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 GLN B 287 REMARK 465 LYS B 288 REMARK 465 ASN B 289 REMARK 465 MET C 1 REMARK 465 SER C 2 REMARK 465 LYS C 25 REMARK 465 GLY C 105 REMARK 465 HIS C 106 REMARK 465 ASN C 107 REMARK 465 ASP C 108 REMARK 465 LYS C 109 REMARK 465 HIS C 110 REMARK 465 THR C 111 REMARK 465 GLY C 112 REMARK 465 LYS C 288 REMARK 465 ASN C 289 REMARK 465 MET D 1 REMARK 465 SER D 2 REMARK 465 GLY D 3 REMARK 465 HIS D 106 REMARK 465 ASN D 107 REMARK 465 ASP D 108 REMARK 465 LYS D 109 REMARK 465 GLN D 287 REMARK 465 LYS D 288 REMARK 465 ASN D 289 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 153 NZ LYS A 155 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS B 25 OD2 ASP D 214 3544 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 113 N - CA - C ANGL. DEV. = 22.7 DEGREES REMARK 500 ALA C 145 N - CA - C ANGL. DEV. = 16.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 10 -179.66 69.26 REMARK 500 ALA A 61 95.10 -67.94 REMARK 500 ASN A 170 -1.95 -148.73 REMARK 500 PHE A 206 18.12 55.31 REMARK 500 LYS A 233 -1.94 67.86 REMARK 500 LEU A 247 109.10 -55.46 REMARK 500 TRP A 283 -164.51 -75.83 REMARK 500 PHE A 284 127.67 -171.15 REMARK 500 ALA B 10 179.20 72.33 REMARK 500 ASN B 23 -166.32 -75.82 REMARK 500 ALA B 61 94.93 -69.61 REMARK 500 ASN B 107 -159.34 -86.19 REMARK 500 LYS B 109 -13.97 -49.66 REMARK 500 THR B 111 -58.65 -143.29 REMARK 500 CYS B 114 -160.56 -114.51 REMARK 500 ASP B 116 -32.55 -31.46 REMARK 500 ASN B 170 -3.01 -145.77 REMARK 500 LYS B 194 -4.45 56.84 REMARK 500 PRO B 200 -178.90 -66.57 REMARK 500 PHE B 206 14.70 56.61 REMARK 500 ASP B 212 -168.84 -73.85 REMARK 500 LEU B 247 109.75 -54.02 REMARK 500 TRP B 283 -162.12 -74.87 REMARK 500 PHE B 284 125.95 -170.25 REMARK 500 ALA C 10 139.88 69.91 REMARK 500 LYS C 75 62.39 61.20 REMARK 500 CYS C 114 -158.61 -119.27 REMARK 500 ASN C 170 -1.75 -148.58 REMARK 500 PHE C 206 15.66 57.26 REMARK 500 ASP C 212 -169.17 -74.04 REMARK 500 LYS C 233 -0.35 66.83 REMARK 500 LEU C 247 107.94 -54.16 REMARK 500 TRP C 283 -164.21 -75.59 REMARK 500 PHE C 284 129.06 -171.34 REMARK 500 ALA D 10 168.69 78.48 REMARK 500 ASN D 23 -175.36 -69.55 REMARK 500 ASP D 42 17.00 57.10 REMARK 500 ALA D 61 91.59 -69.33 REMARK 500 THR D 111 161.00 -48.14 REMARK 500 CYS D 113 -124.44 -157.22 REMARK 500 CYS D 114 -157.18 -84.30 REMARK 500 ASN D 170 -0.48 -146.27 REMARK 500 PRO D 200 -178.84 -67.27 REMARK 500 PHE D 206 16.01 57.86 REMARK 500 ASP D 212 -169.28 -72.86 REMARK 500 THR D 246 -35.25 -130.22 REMARK 500 PHE D 284 132.74 -176.77 REMARK 500 HIS D 285 -143.69 -133.64 REMARK 500 REMARK 500 REMARK: NULL DBREF 7CMO A 1 289 UNP Q15181 IPYR_HUMAN 1 289 DBREF 7CMO B 1 289 UNP Q15181 IPYR_HUMAN 1 289 DBREF 7CMO C 1 289 UNP Q15181 IPYR_HUMAN 1 289 DBREF 7CMO D 1 289 UNP Q15181 IPYR_HUMAN 1 289 SEQRES 1 A 289 MET SER GLY PHE SER THR GLU GLU ARG ALA ALA PRO PHE SEQRES 2 A 289 SER LEU GLU TYR ARG VAL PHE LEU LYS ASN GLU LYS GLY SEQRES 3 A 289 GLN TYR ILE SER PRO PHE HIS ASP ILE PRO ILE TYR ALA SEQRES 4 A 289 ASP LYS ASP VAL PHE HIS MET VAL VAL GLU VAL PRO ARG SEQRES 5 A 289 TRP SER ASN ALA LYS MET GLU ILE ALA THR LYS ASP PRO SEQRES 6 A 289 LEU ASN PRO ILE LYS GLN ASP VAL LYS LYS GLY LYS LEU SEQRES 7 A 289 ARG TYR VAL ALA ASN LEU PHE PRO TYR LYS GLY TYR ILE SEQRES 8 A 289 TRP ASN TYR GLY ALA ILE PRO GLN THR TRP GLU ASP PRO SEQRES 9 A 289 GLY HIS ASN ASP LYS HIS THR GLY CYS CYS GLY ASP ASN SEQRES 10 A 289 ASP PRO ILE ASP VAL CYS GLU ILE GLY SER LYS VAL CYS SEQRES 11 A 289 ALA ARG GLY GLU ILE ILE GLY VAL LYS VAL LEU GLY ILE SEQRES 12 A 289 LEU ALA MET ILE ASP GLU GLY GLU THR ASP TRP LYS VAL SEQRES 13 A 289 ILE ALA ILE ASN VAL ASP ASP PRO ASP ALA ALA ASN TYR SEQRES 14 A 289 ASN ASP ILE ASN ASP VAL LYS ARG LEU LYS PRO GLY TYR SEQRES 15 A 289 LEU GLU ALA THR VAL ASP TRP PHE ARG ARG TYR LYS VAL SEQRES 16 A 289 PRO ASP GLY LYS PRO GLU ASN GLU PHE ALA PHE ASN ALA SEQRES 17 A 289 GLU PHE LYS ASP LYS ASP PHE ALA ILE ASP ILE ILE LYS SEQRES 18 A 289 SER THR HIS ASP HIS TRP LYS ALA LEU VAL THR LYS LYS SEQRES 19 A 289 THR ASN GLY LYS GLY ILE SER CYS MET ASN THR THR LEU SEQRES 20 A 289 SER GLU SER PRO PHE LYS CYS ASP PRO ASP ALA ALA ARG SEQRES 21 A 289 ALA ILE VAL ASP ALA LEU PRO PRO PRO CYS GLU SER ALA SEQRES 22 A 289 CYS THR VAL PRO THR ASP VAL ASP LYS TRP PHE HIS HIS SEQRES 23 A 289 GLN LYS ASN SEQRES 1 B 289 MET SER GLY PHE SER THR GLU GLU ARG ALA ALA PRO PHE SEQRES 2 B 289 SER LEU GLU TYR ARG VAL PHE LEU LYS ASN GLU LYS GLY SEQRES 3 B 289 GLN TYR ILE SER PRO PHE HIS ASP ILE PRO ILE TYR ALA SEQRES 4 B 289 ASP LYS ASP VAL PHE HIS MET VAL VAL GLU VAL PRO ARG SEQRES 5 B 289 TRP SER ASN ALA LYS MET GLU ILE ALA THR LYS ASP PRO SEQRES 6 B 289 LEU ASN PRO ILE LYS GLN ASP VAL LYS LYS GLY LYS LEU SEQRES 7 B 289 ARG TYR VAL ALA ASN LEU PHE PRO TYR LYS GLY TYR ILE SEQRES 8 B 289 TRP ASN TYR GLY ALA ILE PRO GLN THR TRP GLU ASP PRO SEQRES 9 B 289 GLY HIS ASN ASP LYS HIS THR GLY CYS CYS GLY ASP ASN SEQRES 10 B 289 ASP PRO ILE ASP VAL CYS GLU ILE GLY SER LYS VAL CYS SEQRES 11 B 289 ALA ARG GLY GLU ILE ILE GLY VAL LYS VAL LEU GLY ILE SEQRES 12 B 289 LEU ALA MET ILE ASP GLU GLY GLU THR ASP TRP LYS VAL SEQRES 13 B 289 ILE ALA ILE ASN VAL ASP ASP PRO ASP ALA ALA ASN TYR SEQRES 14 B 289 ASN ASP ILE ASN ASP VAL LYS ARG LEU LYS PRO GLY TYR SEQRES 15 B 289 LEU GLU ALA THR VAL ASP TRP PHE ARG ARG TYR LYS VAL SEQRES 16 B 289 PRO ASP GLY LYS PRO GLU ASN GLU PHE ALA PHE ASN ALA SEQRES 17 B 289 GLU PHE LYS ASP LYS ASP PHE ALA ILE ASP ILE ILE LYS SEQRES 18 B 289 SER THR HIS ASP HIS TRP LYS ALA LEU VAL THR LYS LYS SEQRES 19 B 289 THR ASN GLY LYS GLY ILE SER CYS MET ASN THR THR LEU SEQRES 20 B 289 SER GLU SER PRO PHE LYS CYS ASP PRO ASP ALA ALA ARG SEQRES 21 B 289 ALA ILE VAL ASP ALA LEU PRO PRO PRO CYS GLU SER ALA SEQRES 22 B 289 CYS THR VAL PRO THR ASP VAL ASP LYS TRP PHE HIS HIS SEQRES 23 B 289 GLN LYS ASN SEQRES 1 C 289 MET SER GLY PHE SER THR GLU GLU ARG ALA ALA PRO PHE SEQRES 2 C 289 SER LEU GLU TYR ARG VAL PHE LEU LYS ASN GLU LYS GLY SEQRES 3 C 289 GLN TYR ILE SER PRO PHE HIS ASP ILE PRO ILE TYR ALA SEQRES 4 C 289 ASP LYS ASP VAL PHE HIS MET VAL VAL GLU VAL PRO ARG SEQRES 5 C 289 TRP SER ASN ALA LYS MET GLU ILE ALA THR LYS ASP PRO SEQRES 6 C 289 LEU ASN PRO ILE LYS GLN ASP VAL LYS LYS GLY LYS LEU SEQRES 7 C 289 ARG TYR VAL ALA ASN LEU PHE PRO TYR LYS GLY TYR ILE SEQRES 8 C 289 TRP ASN TYR GLY ALA ILE PRO GLN THR TRP GLU ASP PRO SEQRES 9 C 289 GLY HIS ASN ASP LYS HIS THR GLY CYS CYS GLY ASP ASN SEQRES 10 C 289 ASP PRO ILE ASP VAL CYS GLU ILE GLY SER LYS VAL CYS SEQRES 11 C 289 ALA ARG GLY GLU ILE ILE GLY VAL LYS VAL LEU GLY ILE SEQRES 12 C 289 LEU ALA MET ILE ASP GLU GLY GLU THR ASP TRP LYS VAL SEQRES 13 C 289 ILE ALA ILE ASN VAL ASP ASP PRO ASP ALA ALA ASN TYR SEQRES 14 C 289 ASN ASP ILE ASN ASP VAL LYS ARG LEU LYS PRO GLY TYR SEQRES 15 C 289 LEU GLU ALA THR VAL ASP TRP PHE ARG ARG TYR LYS VAL SEQRES 16 C 289 PRO ASP GLY LYS PRO GLU ASN GLU PHE ALA PHE ASN ALA SEQRES 17 C 289 GLU PHE LYS ASP LYS ASP PHE ALA ILE ASP ILE ILE LYS SEQRES 18 C 289 SER THR HIS ASP HIS TRP LYS ALA LEU VAL THR LYS LYS SEQRES 19 C 289 THR ASN GLY LYS GLY ILE SER CYS MET ASN THR THR LEU SEQRES 20 C 289 SER GLU SER PRO PHE LYS CYS ASP PRO ASP ALA ALA ARG SEQRES 21 C 289 ALA ILE VAL ASP ALA LEU PRO PRO PRO CYS GLU SER ALA SEQRES 22 C 289 CYS THR VAL PRO THR ASP VAL ASP LYS TRP PHE HIS HIS SEQRES 23 C 289 GLN LYS ASN SEQRES 1 D 289 MET SER GLY PHE SER THR GLU GLU ARG ALA ALA PRO PHE SEQRES 2 D 289 SER LEU GLU TYR ARG VAL PHE LEU LYS ASN GLU LYS GLY SEQRES 3 D 289 GLN TYR ILE SER PRO PHE HIS ASP ILE PRO ILE TYR ALA SEQRES 4 D 289 ASP LYS ASP VAL PHE HIS MET VAL VAL GLU VAL PRO ARG SEQRES 5 D 289 TRP SER ASN ALA LYS MET GLU ILE ALA THR LYS ASP PRO SEQRES 6 D 289 LEU ASN PRO ILE LYS GLN ASP VAL LYS LYS GLY LYS LEU SEQRES 7 D 289 ARG TYR VAL ALA ASN LEU PHE PRO TYR LYS GLY TYR ILE SEQRES 8 D 289 TRP ASN TYR GLY ALA ILE PRO GLN THR TRP GLU ASP PRO SEQRES 9 D 289 GLY HIS ASN ASP LYS HIS THR GLY CYS CYS GLY ASP ASN SEQRES 10 D 289 ASP PRO ILE ASP VAL CYS GLU ILE GLY SER LYS VAL CYS SEQRES 11 D 289 ALA ARG GLY GLU ILE ILE GLY VAL LYS VAL LEU GLY ILE SEQRES 12 D 289 LEU ALA MET ILE ASP GLU GLY GLU THR ASP TRP LYS VAL SEQRES 13 D 289 ILE ALA ILE ASN VAL ASP ASP PRO ASP ALA ALA ASN TYR SEQRES 14 D 289 ASN ASP ILE ASN ASP VAL LYS ARG LEU LYS PRO GLY TYR SEQRES 15 D 289 LEU GLU ALA THR VAL ASP TRP PHE ARG ARG TYR LYS VAL SEQRES 16 D 289 PRO ASP GLY LYS PRO GLU ASN GLU PHE ALA PHE ASN ALA SEQRES 17 D 289 GLU PHE LYS ASP LYS ASP PHE ALA ILE ASP ILE ILE LYS SEQRES 18 D 289 SER THR HIS ASP HIS TRP LYS ALA LEU VAL THR LYS LYS SEQRES 19 D 289 THR ASN GLY LYS GLY ILE SER CYS MET ASN THR THR LEU SEQRES 20 D 289 SER GLU SER PRO PHE LYS CYS ASP PRO ASP ALA ALA ARG SEQRES 21 D 289 ALA ILE VAL ASP ALA LEU PRO PRO PRO CYS GLU SER ALA SEQRES 22 D 289 CYS THR VAL PRO THR ASP VAL ASP LYS TRP PHE HIS HIS SEQRES 23 D 289 GLN LYS ASN HELIX 1 AA1 ASP A 165 TYR A 169 5 5 HELIX 2 AA2 ASP A 171 LYS A 179 1 9 HELIX 3 AA3 GLY A 181 TYR A 193 1 13 HELIX 4 AA4 LYS A 194 GLY A 198 5 5 HELIX 5 AA5 PHE A 206 GLU A 209 5 4 HELIX 6 AA6 ASP A 212 THR A 232 1 21 HELIX 7 AA7 ASP A 255 ALA A 265 1 11 HELIX 8 AA8 PRO A 277 LYS A 282 5 6 HELIX 9 AA9 ASP B 165 TYR B 169 5 5 HELIX 10 AB1 ASP B 171 LYS B 179 1 9 HELIX 11 AB2 GLY B 181 TYR B 193 1 13 HELIX 12 AB3 LYS B 194 GLY B 198 5 5 HELIX 13 AB4 PHE B 204 ALA B 208 5 5 HELIX 14 AB5 ASP B 212 THR B 232 1 21 HELIX 15 AB6 ASP B 255 ALA B 265 1 11 HELIX 16 AB7 PRO B 277 ASP B 281 5 5 HELIX 17 AB8 ASP C 171 LYS C 179 1 9 HELIX 18 AB9 GLY C 181 TYR C 193 1 13 HELIX 19 AC1 LYS C 194 GLY C 198 5 5 HELIX 20 AC2 PHE C 206 ALA C 208 5 3 HELIX 21 AC3 ASP C 212 THR C 232 1 21 HELIX 22 AC4 ASP C 255 ALA C 265 1 11 HELIX 23 AC5 PRO C 277 ASP C 281 5 5 HELIX 24 AC6 ASP D 165 TYR D 169 5 5 HELIX 25 AC7 ASP D 171 LYS D 179 1 9 HELIX 26 AC8 GLY D 181 TYR D 193 1 13 HELIX 27 AC9 LYS D 194 GLY D 198 5 5 HELIX 28 AD1 PHE D 206 ALA D 208 5 3 HELIX 29 AD2 ASP D 212 THR D 232 1 21 HELIX 30 AD3 ASP D 255 ALA D 265 1 11 HELIX 31 AD4 PRO D 277 ASP D 281 5 5 SHEET 1 AA1 3 SER A 5 ARG A 9 0 SHEET 2 AA1 3 ARG A 18 LYS A 22 -1 O LYS A 22 N SER A 5 SHEET 3 AA1 3 TYR A 28 ILE A 29 -1 O ILE A 29 N LEU A 21 SHEET 1 AA2 7 TYR A 38 ASP A 40 0 SHEET 2 AA2 7 VAL A 43 VAL A 50 -1 O VAL A 43 N ALA A 39 SHEET 3 AA2 7 ASN A 93 ILE A 97 -1 O ALA A 96 N VAL A 47 SHEET 4 AA2 7 ILE A 120 GLU A 124 -1 O GLU A 124 N ASN A 93 SHEET 5 AA2 7 GLU A 151 ASN A 160 1 O VAL A 156 N ASP A 121 SHEET 6 AA2 7 ILE A 135 ASP A 148 -1 N ASP A 148 O GLU A 151 SHEET 7 AA2 7 GLU A 203 PHE A 204 -1 O GLU A 203 N ILE A 147 SHEET 1 AA3 4 TYR A 38 ASP A 40 0 SHEET 2 AA3 4 VAL A 43 VAL A 50 -1 O VAL A 43 N ALA A 39 SHEET 3 AA3 4 ILE A 135 ASP A 148 -1 O VAL A 138 N PHE A 44 SHEET 4 AA3 4 GLU A 203 PHE A 204 -1 O GLU A 203 N ILE A 147 SHEET 1 AA4 2 MET A 58 ILE A 60 0 SHEET 2 AA4 2 ILE A 69 GLN A 71 -1 O LYS A 70 N GLU A 59 SHEET 1 AA5 2 VAL A 73 LYS A 74 0 SHEET 2 AA5 2 LYS A 77 LEU A 78 -1 O LYS A 77 N LYS A 74 SHEET 1 AA6 3 SER B 5 ARG B 9 0 SHEET 2 AA6 3 ARG B 18 LYS B 22 -1 O LYS B 22 N SER B 5 SHEET 3 AA6 3 TYR B 28 ILE B 29 -1 O ILE B 29 N LEU B 21 SHEET 1 AA7 4 SER B 5 ARG B 9 0 SHEET 2 AA7 4 ARG B 18 LYS B 22 -1 O LYS B 22 N SER B 5 SHEET 3 AA7 4 ILE B 69 GLN B 71 -1 O ILE B 69 N VAL B 19 SHEET 4 AA7 4 MET B 58 ILE B 60 -1 N GLU B 59 O LYS B 70 SHEET 1 AA8 6 TYR B 38 ASP B 40 0 SHEET 2 AA8 6 VAL B 43 VAL B 50 -1 O VAL B 43 N ALA B 39 SHEET 3 AA8 6 ASN B 93 ILE B 97 -1 O ALA B 96 N VAL B 47 SHEET 4 AA8 6 ILE B 120 GLU B 124 -1 O GLU B 124 N ASN B 93 SHEET 5 AA8 6 GLU B 151 ASN B 160 1 O VAL B 156 N ASP B 121 SHEET 6 AA8 6 CYS B 114 GLY B 115 1 N CYS B 114 O THR B 152 SHEET 1 AA9 5 TYR B 38 ASP B 40 0 SHEET 2 AA9 5 VAL B 43 VAL B 50 -1 O VAL B 43 N ALA B 39 SHEET 3 AA9 5 ILE B 135 ASP B 148 -1 O ILE B 136 N MET B 46 SHEET 4 AA9 5 GLU B 151 ASN B 160 -1 O ASP B 153 N MET B 146 SHEET 5 AA9 5 CYS B 114 GLY B 115 1 N CYS B 114 O THR B 152 SHEET 1 AB1 2 VAL B 73 LYS B 74 0 SHEET 2 AB1 2 LYS B 77 LEU B 78 -1 O LYS B 77 N LYS B 74 SHEET 1 AB2 3 PHE C 4 ARG C 9 0 SHEET 2 AB2 3 ARG C 18 ASN C 23 -1 O PHE C 20 N GLU C 7 SHEET 3 AB2 3 TYR C 28 ILE C 29 -1 O ILE C 29 N LEU C 21 SHEET 1 AB3 4 PHE C 4 ARG C 9 0 SHEET 2 AB3 4 ARG C 18 ASN C 23 -1 O PHE C 20 N GLU C 7 SHEET 3 AB3 4 ILE C 69 GLN C 71 -1 O ILE C 69 N VAL C 19 SHEET 4 AB3 4 MET C 58 ILE C 60 -1 N GLU C 59 O LYS C 70 SHEET 1 AB4 6 PHE C 44 VAL C 50 0 SHEET 2 AB4 6 ASN C 93 ILE C 97 -1 O ALA C 96 N VAL C 47 SHEET 3 AB4 6 ILE C 120 GLU C 124 -1 O GLU C 124 N ASN C 93 SHEET 4 AB4 6 LYS C 155 ASN C 160 1 O VAL C 156 N ASP C 121 SHEET 5 AB4 6 ILE C 135 ILE C 143 -1 N GLY C 142 O ILE C 157 SHEET 6 AB4 6 PHE C 44 VAL C 50 -1 N PHE C 44 O VAL C 138 SHEET 1 AB5 2 VAL C 73 LYS C 74 0 SHEET 2 AB5 2 LYS C 77 LEU C 78 -1 O LYS C 77 N LYS C 74 SHEET 1 AB6 3 GLU C 151 ASP C 153 0 SHEET 2 AB6 3 MET C 146 ASP C 148 -1 N ASP C 148 O GLU C 151 SHEET 3 AB6 3 GLU C 203 PHE C 204 -1 O GLU C 203 N ILE C 147 SHEET 1 AB7 3 SER D 5 ARG D 9 0 SHEET 2 AB7 3 ARG D 18 LYS D 22 -1 O LYS D 22 N SER D 5 SHEET 3 AB7 3 TYR D 28 ILE D 29 -1 O ILE D 29 N LEU D 21 SHEET 1 AB8 4 CYS D 114 GLY D 115 0 SHEET 2 AB8 4 GLU D 151 ASN D 160 1 O THR D 152 N CYS D 114 SHEET 3 AB8 4 ILE D 135 ASP D 148 -1 N ASP D 148 O GLU D 151 SHEET 4 AB8 4 GLU D 203 PHE D 204 -1 O GLU D 203 N ILE D 147 SHEET 1 AB9 7 TYR D 38 ASP D 40 0 SHEET 2 AB9 7 VAL D 43 VAL D 50 -1 O VAL D 43 N ALA D 39 SHEET 3 AB9 7 ASN D 93 ILE D 97 -1 O ALA D 96 N VAL D 47 SHEET 4 AB9 7 ILE D 120 GLU D 124 -1 O GLU D 124 N ASN D 93 SHEET 5 AB9 7 GLU D 151 ASN D 160 1 O ALA D 158 N CYS D 123 SHEET 6 AB9 7 ILE D 135 ASP D 148 -1 N ASP D 148 O GLU D 151 SHEET 7 AB9 7 GLU D 203 PHE D 204 -1 O GLU D 203 N ILE D 147 SHEET 1 AC1 4 GLU D 203 PHE D 204 0 SHEET 2 AC1 4 ILE D 135 ASP D 148 -1 N ILE D 147 O GLU D 203 SHEET 3 AC1 4 VAL D 43 VAL D 50 -1 N PHE D 44 O VAL D 138 SHEET 4 AC1 4 TYR D 38 ASP D 40 -1 N ALA D 39 O VAL D 43 SHEET 1 AC2 2 MET D 58 ILE D 60 0 SHEET 2 AC2 2 ILE D 69 GLN D 71 -1 O LYS D 70 N GLU D 59 SHEET 1 AC3 2 VAL D 73 LYS D 74 0 SHEET 2 AC3 2 LYS D 77 LEU D 78 -1 O LYS D 77 N LYS D 74 SSBOND 1 CYS A 254 CYS C 254 1555 2554 2.04 CISPEP 1 PHE A 85 PRO A 86 0 0.43 CISPEP 2 PHE B 85 PRO B 86 0 -0.81 CISPEP 3 PHE C 85 PRO C 86 0 1.06 CISPEP 4 PHE D 85 PRO D 86 0 0.37 CRYST1 49.905 135.041 212.707 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020038 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007405 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004701 0.00000