HEADER LYASE 03-AUG-20 7CNS TITLE CRYSTAL STRUCTURE OF THERMOCOCCUS KODAKARAENSIS ACONITASE X (HOLO- TITLE 2 FORM) COMPND MOL_ID: 1; COMPND 2 MOLECULE: DUF521 DOMAIN-CONTAINING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: UPF0107 PROTEIN TK1248; COMPND 7 CHAIN: B; COMPND 8 SYNONYM: MEVALONATE 5-PHOSPHATE DEHYDRATASE SMALL SUBUNIT; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOCOCCUS KODAKARENSIS (STRAIN ATCC BAA-918 SOURCE 3 / JCM 12380 / KOD1); SOURCE 4 ORGANISM_TAXID: 69014; SOURCE 5 STRAIN: ATCC BAA-918 / JCM 12380 / KOD1; SOURCE 6 GENE: TK1249; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: THERMOCOCCUS KODAKARENSIS (STRAIN ATCC BAA-918 SOURCE 11 / JCM 12380 / KOD1); SOURCE 12 ORGANISM_TAXID: 69014; SOURCE 13 STRAIN: ATCC BAA-918 / JCM 12380 / KOD1; SOURCE 14 GENE: TK1248; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MEVALONATE 5-PHOSPHATE DEHYDRATASE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.MURASE,Y.WATANABE,S.WATANABE REVDAT 2 28-DEC-22 7CNS 1 JRNL REVDAT 1 16-JUN-21 7CNS 0 JRNL AUTH S.WATANABE,Y.MURASE,Y.WATANABE,Y.SAKURAI,K.TAJIMA JRNL TITL CRYSTAL STRUCTURES OF ACONITASE X ENZYMES FROM BACTERIA AND JRNL TITL 2 ARCHAEA PROVIDE INSIGHTS INTO THE MOLECULAR EVOLUTION OF THE JRNL TITL 3 ACONITASE SUPERFAMILY. JRNL REF COMMUN BIOL V. 4 687 2021 JRNL REFN ESSN 2399-3642 JRNL PMID 34099860 JRNL DOI 10.1038/S42003-021-02147-5 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.85 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 48577 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.120 REMARK 3 FREE R VALUE TEST SET COUNT : 2489 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.8470 - 4.9828 0.99 2804 140 0.1562 0.1952 REMARK 3 2 4.9828 - 3.9557 1.00 2631 158 0.1361 0.1501 REMARK 3 3 3.9557 - 3.4558 0.99 2606 149 0.1610 0.1619 REMARK 3 4 3.4558 - 3.1399 1.00 2593 132 0.1757 0.2052 REMARK 3 5 3.1399 - 2.9149 1.00 2573 139 0.1833 0.2318 REMARK 3 6 2.9149 - 2.7431 1.00 2596 141 0.1820 0.2363 REMARK 3 7 2.7431 - 2.6057 1.00 2558 151 0.1773 0.2199 REMARK 3 8 2.6057 - 2.4923 0.99 2557 121 0.1724 0.2115 REMARK 3 9 2.4923 - 2.3964 1.00 2574 132 0.1758 0.2397 REMARK 3 10 2.3964 - 2.3137 1.00 2544 135 0.1848 0.2296 REMARK 3 11 2.3137 - 2.2413 0.99 2558 119 0.1825 0.2850 REMARK 3 12 2.2413 - 2.1773 1.00 2528 139 0.1838 0.2323 REMARK 3 13 2.1773 - 2.1199 1.00 2551 144 0.1896 0.2388 REMARK 3 14 2.1199 - 2.0682 1.00 2512 166 0.2020 0.2334 REMARK 3 15 2.0682 - 2.0212 1.00 2548 138 0.2085 0.2202 REMARK 3 16 2.0212 - 1.9782 1.00 2550 115 0.2267 0.2895 REMARK 3 17 1.9782 - 1.9386 0.98 2481 138 0.2355 0.2733 REMARK 3 18 1.9386 - 1.9020 0.92 2324 132 0.2630 0.3333 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.470 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 44.16 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7CNS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-AUG-20. REMARK 100 THE DEPOSITION ID IS D_1300017927. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-APR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 91030 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 46.847 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 3.499 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.5400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.33 REMARK 200 R MERGE FOR SHELL (I) : 0.80100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.270 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PENTAERYTHRITOL ETHOXYLATE (15/4 REMARK 280 EO/OH), AMMONIUM SULFATE, BIS-TRIS, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 51.22200 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 51.22200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 57.92450 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 51.22200 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 51.22200 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 57.92450 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 51.22200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 51.22200 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 57.92450 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 51.22200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 51.22200 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 57.92450 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -90.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 773 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP B 131 REMARK 465 GLY B 132 REMARK 465 GLU B 133 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 246 OE2 GLU A 246 2555 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 111 65.96 -119.83 REMARK 500 GLU A 129 101.94 63.13 REMARK 500 PHE A 269 63.41 -119.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F3S A 502 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 110 SG REMARK 620 2 F3S A 502 S1 113.2 REMARK 620 3 F3S A 502 S3 115.1 105.8 REMARK 620 4 F3S A 502 S4 109.3 109.9 102.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F3S A 502 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 283 SG REMARK 620 2 F3S A 502 S2 105.8 REMARK 620 3 F3S A 502 S3 111.3 106.6 REMARK 620 4 F3S A 502 S4 118.3 111.7 102.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F3S A 502 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 342 SG REMARK 620 2 F3S A 502 S1 117.8 REMARK 620 3 F3S A 502 S2 107.4 111.2 REMARK 620 4 F3S A 502 S3 108.8 104.8 106.3 REMARK 620 N 1 2 3 DBREF 7CNS A 1 386 UNP Q5JGJ6 Q5JGJ6_THEKO 1 386 DBREF 7CNS B 2 133 UNP Q5JGJ7 Y1248_THEKO 2 133 SEQADV 7CNS GLY B 0 UNP Q5JGJ7 EXPRESSION TAG SEQADV 7CNS PRO B 1 UNP Q5JGJ7 EXPRESSION TAG SEQRES 1 A 386 MET TYR LEU THR LYS GLU GLU GLU LEU ILE LEU ALA GLY SEQRES 2 A 386 GLU TYR GLY TYR ALA LEU GLN LYS ALA MET GLU ILE LEU SEQRES 3 A 386 VAL ALA LEU GLY ASP ILE TYR GLY ALA ASP ARG LEU ILE SEQRES 4 A 386 PRO ILE LYS SER ALA GLN VAL ALA GLY VAL SER TYR LYS SEQRES 5 A 386 ASN ILE GLY ASP ALA GLY ILE GLU PHE LEU ARG ASP PHE SEQRES 6 A 386 VAL GLU ALA GLY ALA LYS VAL SER VAL TYR THR THR LEU SEQRES 7 A 386 ASN PRO ALA GLY ILE GLY ASP ASP GLU PHE MET GLU LYS SEQRES 8 A 386 GLN MET GLU VAL LEU GLU LEU TYR ARG LYS MET GLY ILE SEQRES 9 A 386 GLU VAL THR SER THR CYS THR PRO TYR TYR GLY ALA ASN SEQRES 10 A 386 LEU PRO LYS PHE GLY ASP HIS ILE ALA TRP SER GLU SER SEQRES 11 A 386 SER ALA VAL SER PHE ALA ASN SER ILE LEU GLY ALA ARG SEQRES 12 A 386 THR ASN ARG GLU GLY GLY PRO SER SER LEU ALA ALA ALA SEQRES 13 A 386 ILE VAL GLY LYS THR PRO ASN TYR GLY LEU HIS LEU ASP SEQRES 14 A 386 GLU ASN ARG LYS ALA THR VAL ILE VAL ASP VAL LYS ALA SEQRES 15 A 386 LYS VAL LYS THR PHE ALA ASP TYR SER VAL LEU GLY TYR SEQRES 16 A 386 HIS VAL GLY LYS THR LEU GLY ASN ASP VAL PRO TYR PHE SEQRES 17 A 386 LYS ASN LEU LYS PRO GLU LYS THR GLU PHE LEU LYS GLU SEQRES 18 A 386 LEU GLY ALA ALA MET GLY ALA THR GLY SER ILE ALA LEU SEQRES 19 A 386 TYR HIS VAL GLU GLY GLU THR PRO GLU TYR ARG GLU ALA SEQRES 20 A 386 ILE THR ASP LYS LEU GLU THR ILE THR VAL GLU ASP SER SEQRES 21 A 386 ASP LEU LYS ALA VAL ARG GLU SER PHE GLN ASP ASP TRP SEQRES 22 A 386 SER ASP ILE ASP MET ILE LEU ILE GLY CYS PRO HIS ALA SEQRES 23 A 386 SER LEU PRO GLU VAL LYS GLU ILE ALA GLU LEU LEU ARG SEQRES 24 A 386 MET ARG GLY LYS PRO LEU LYS ILE PRO LEU PHE ILE THR SEQRES 25 A 386 ALA SER ARG ALA VAL LYS ALA LEU ALA ASP ALA LEU GLY SEQRES 26 A 386 TYR THR GLU ILE ILE GLU ARG TYR ASN GLY LYS ILE ILE SEQRES 27 A 386 PRO ASP SER CYS PHE VAL VAL SER PRO ILE LYS GLY TRP SEQRES 28 A 386 TYR ARG GLY ILE ALA THR ASN SER GLY LYS SER ALA PHE SEQRES 29 A 386 TYR PHE ARG SER PHE GLY PHE SER VAL ARG LEU ASP ASP SEQRES 30 A 386 VAL GLU ASN LEU ILE LYS GLU ALA PRO SEQRES 1 B 134 GLY PRO LYS LEU LYS GLY ARG LYS ILE VAL GLY GLY LYS SEQRES 2 B 134 ALA GLU GLY GLU VAL ILE VAL SER ARG LYS PRO LEU SER SEQRES 3 B 134 PHE LEU GLY GLY VAL ASP PRO GLU THR GLY ILE VAL THR SEQRES 4 B 134 ASP ALA GLU SER ASP ILE ARG GLY GLN SER ILE ALA GLY SEQRES 5 B 134 LYS ILE LEU VAL PHE PRO ARG GLY LYS GLY SER THR VAL SEQRES 6 B 134 GLY SER TYR VAL ILE TYR ALA LEU LYS LYS ASN ASN LYS SEQRES 7 B 134 ALA PRO LYS ALA ILE ILE VAL GLY GLU ALA GLU THR ILE SEQRES 8 B 134 VAL ALA THR GLY ALA ILE ILE SER ASP ILE PRO MET VAL SEQRES 9 B 134 ASP GLY VAL ASP VAL SER LYS LEU LYS THR GLY MET LYS SEQRES 10 B 134 VAL ARG VAL ASP ALA ASP SER GLY GLU VAL GLU ILE LEU SEQRES 11 B 134 GLU ASP GLY GLU HET PMV A 501 14 HET F3S A 502 7 HETNAM PMV (3R)-3-HYDROXY-3-METHYL-5-(PHOSPHONOOXY)PENTANOIC ACID HETNAM F3S FE3-S4 CLUSTER HETSYN PMV PHOSPHOMEVALONATE FORMUL 3 PMV C6 H13 O7 P FORMUL 4 F3S FE3 S4 FORMUL 5 HOH *250(H2 O) HELIX 1 AA1 THR A 4 GLY A 13 1 10 HELIX 2 AA2 GLY A 16 GLY A 34 1 19 HELIX 3 AA3 SER A 50 ALA A 68 1 19 HELIX 4 AA4 ASP A 85 MET A 102 1 18 HELIX 5 AA5 GLU A 129 ILE A 139 1 11 HELIX 6 AA6 GLY A 148 GLY A 159 1 12 HELIX 7 AA7 TYR A 164 LYS A 173 5 10 HELIX 8 AA8 THR A 186 LEU A 201 1 16 HELIX 9 AA9 LYS A 215 GLY A 230 1 16 HELIX 10 AB1 GLU A 243 ALA A 247 5 5 HELIX 11 AB2 GLU A 258 PHE A 269 1 12 HELIX 12 AB3 ASP A 272 ILE A 276 5 5 HELIX 13 AB4 SER A 287 GLY A 302 1 16 HELIX 14 AB5 SER A 314 LEU A 324 1 11 HELIX 15 AB6 GLY A 325 ARG A 332 1 8 HELIX 16 AB7 SER A 359 PHE A 369 1 11 HELIX 17 AB8 ASP A 377 ALA A 385 1 9 HELIX 18 AB9 SER B 25 VAL B 30 1 6 HELIX 19 AC1 VAL B 64 ASN B 75 1 12 HELIX 20 AC2 GLU B 88 ASP B 99 1 12 HELIX 21 AC3 ASP B 107 LEU B 111 5 5 SHEET 1 AA1 2 LEU A 38 PRO A 40 0 SHEET 2 AA1 2 LYS A 160 PRO A 162 -1 O THR A 161 N ILE A 39 SHEET 1 AA2 3 THR A 76 LEU A 78 0 SHEET 2 AA2 3 ALA A 44 VAL A 46 1 N ALA A 44 O THR A 77 SHEET 3 AA2 3 ALA A 126 TRP A 127 1 O ALA A 126 N GLN A 45 SHEET 1 AA3 4 HIS A 236 VAL A 237 0 SHEET 2 AA3 4 PRO A 206 LYS A 209 1 N PHE A 208 O HIS A 236 SHEET 3 AA3 4 VAL A 176 VAL A 180 1 N VAL A 178 O TYR A 207 SHEET 4 AA3 4 THR A 254 VAL A 257 1 O ILE A 255 N ASP A 179 SHEET 1 AA4 5 GLY A 335 PRO A 339 0 SHEET 2 AA4 5 LEU A 309 ALA A 313 1 N ILE A 311 O ILE A 338 SHEET 3 AA4 5 MET A 278 ALA A 286 1 N ILE A 279 O PHE A 310 SHEET 4 AA4 5 GLY A 354 THR A 357 1 O ALA A 356 N LEU A 280 SHEET 5 AA4 5 SER A 372 LEU A 375 1 O ARG A 374 N THR A 357 SHEET 1 AA5 8 LYS B 2 LYS B 4 0 SHEET 2 AA5 8 GLU B 125 LEU B 129 -1 O VAL B 126 N LEU B 3 SHEET 3 AA5 8 LYS B 116 ASP B 120 -1 N ASP B 120 O GLU B 125 SHEET 4 AA5 8 LYS B 12 VAL B 19 -1 N ALA B 13 O VAL B 119 SHEET 5 AA5 8 ILE B 53 ARG B 58 1 O ILE B 53 N GLU B 16 SHEET 6 AA5 8 ALA B 81 GLU B 86 1 O ILE B 83 N LEU B 54 SHEET 7 AA5 8 MET B 102 ASP B 104 1 O VAL B 103 N VAL B 84 SHEET 8 AA5 8 ARG B 6 VAL B 9 -1 N ARG B 6 O ASP B 104 LINK SG CYS A 110 FE3 F3S A 502 1555 1555 2.42 LINK SG CYS A 283 FE4 F3S A 502 1555 1555 2.44 LINK SG CYS A 342 FE1 F3S A 502 1555 1555 2.41 CISPEP 1 CYS A 283 PRO A 284 0 -3.67 CRYST1 102.444 102.444 115.849 90.00 90.00 90.00 P 42 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009761 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009761 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008632 0.00000