HEADER PEPTIDE BINDING PROTEIN 03-AUG-20 7CO3 TITLE HTRA-TYPE PROTEASE ALGWS227A WITH TRIPEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRP-VAL-PHE; COMPND 3 CHAIN: C; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: ALGW PROTEIN; COMPND 7 CHAIN: A; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA (STRAIN ATCC 15692 / DSM SOURCE 7 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1); SOURCE 8 ORGANISM_TAXID: 208964; SOURCE 9 STRAIN: ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 SOURCE 10 / 1C / PRS 101 / PAO1; SOURCE 11 GENE: ALGW, PA4446; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 13 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS COMPLEX, PEPTIDE BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.LI,Y.J.SONG,R.BAO REVDAT 2 29-NOV-23 7CO3 1 REMARK REVDAT 1 10-MAR-21 7CO3 0 JRNL AUTH T.LI,Y.SONG,L.LUO,N.ZHAO,L.HE,M.KANG,C.LI,Y.ZHU,Y.SHEN, JRNL AUTH 2 C.ZHAO,J.YANG,Q.HUANG,X.MOU,Z.ZONG,J.YANG,H.TANG,Y.HE,R.BAO JRNL TITL MOLECULAR BASIS OF THE VERSATILE REGULATORY MECHANISM OF JRNL TITL 2 HTRA-TYPE PROTEASE ALGW FROM PSEUDOMONAS AERUGINOSA. JRNL REF MBIO V. 12 2021 JRNL REFN ESSN 2150-7511 JRNL PMID 33622718 JRNL DOI 10.1128/MBIO.03299-20 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.49 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 49248 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.236 REMARK 3 R VALUE (WORKING SET) : 0.234 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.530 REMARK 3 FREE R VALUE TEST SET COUNT : 3706 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.4900 - 5.6200 1.00 1778 137 0.2152 0.2472 REMARK 3 2 5.6200 - 4.4600 1.00 1771 133 0.1976 0.2264 REMARK 3 3 4.4600 - 3.9000 1.00 1752 149 0.1750 0.2277 REMARK 3 4 3.9000 - 3.5400 1.00 1747 140 0.1958 0.2261 REMARK 3 5 3.5400 - 3.2900 1.00 1753 146 0.2064 0.2161 REMARK 3 6 3.2900 - 3.0900 1.00 1768 142 0.2300 0.2597 REMARK 3 7 3.0900 - 2.9400 1.00 1732 143 0.2316 0.3061 REMARK 3 8 2.9400 - 2.8100 1.00 1786 137 0.2300 0.2894 REMARK 3 9 2.8100 - 2.7000 1.00 1736 144 0.2202 0.2838 REMARK 3 10 2.7000 - 2.6100 1.00 1739 142 0.2258 0.2884 REMARK 3 11 2.6100 - 2.5300 1.00 1768 146 0.2454 0.2610 REMARK 3 12 2.5300 - 2.4600 1.00 1765 140 0.2289 0.2770 REMARK 3 13 2.4600 - 2.3900 1.00 1729 145 0.2499 0.3029 REMARK 3 14 2.3900 - 2.3300 1.00 1779 143 0.2516 0.2892 REMARK 3 15 2.3300 - 2.2800 1.00 1764 147 0.2455 0.2965 REMARK 3 16 2.2800 - 2.2300 1.00 1747 144 0.2543 0.2800 REMARK 3 17 2.2300 - 2.1900 1.00 1722 146 0.2691 0.2781 REMARK 3 18 2.1900 - 2.1500 1.00 1758 141 0.2743 0.3041 REMARK 3 19 2.1500 - 2.1100 1.00 1770 142 0.2928 0.3225 REMARK 3 20 2.1100 - 2.0700 1.00 1770 144 0.3074 0.3510 REMARK 3 21 2.0700 - 2.0400 1.00 1759 146 0.3317 0.3895 REMARK 3 22 2.0400 - 2.0100 1.00 1751 144 0.3262 0.3431 REMARK 3 23 2.0100 - 1.9800 1.00 1723 137 0.3331 0.3793 REMARK 3 24 1.9800 - 1.9500 1.00 1782 149 0.3377 0.3158 REMARK 3 25 1.9500 - 1.9200 1.00 1717 139 0.3383 0.3383 REMARK 3 26 1.9200 - 1.9000 0.95 1676 140 0.3733 0.3955 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.815 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.71 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.84 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 2231 REMARK 3 ANGLE : 1.503 3026 REMARK 3 CHIRALITY : 0.088 363 REMARK 3 PLANARITY : 0.008 398 REMARK 3 DIHEDRAL : 13.849 1337 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7CO3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-AUG-20. REMARK 100 THE DEPOSITION ID IS D_1300017969. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JUN-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97930 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49248 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.898 REMARK 200 RESOLUTION RANGE LOW (A) : 39.490 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 28.50 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.6700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1SOZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.8M SODIUM/POTASSIUM PHOSPHATE, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 59.77500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 59.77500 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 59.77500 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 59.77500 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 59.77500 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 59.77500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -47.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 48.30700 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -83.67018 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 96.61400 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 425 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 483 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 534 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 538 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 547 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 555 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 561 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 564 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 LYS A 3 REMARK 465 ALA A 4 REMARK 465 LEU A 5 REMARK 465 ARG A 6 REMARK 465 PHE A 7 REMARK 465 LEU A 8 REMARK 465 GLY A 9 REMARK 465 TRP A 10 REMARK 465 PRO A 11 REMARK 465 VAL A 12 REMARK 465 LEU A 13 REMARK 465 VAL A 14 REMARK 465 GLY A 15 REMARK 465 VAL A 16 REMARK 465 LEU A 17 REMARK 465 LEU A 18 REMARK 465 ALA A 19 REMARK 465 LEU A 20 REMARK 465 LEU A 21 REMARK 465 ILE A 22 REMARK 465 ILE A 23 REMARK 465 GLN A 24 REMARK 465 HIS A 25 REMARK 465 ASN A 26 REMARK 465 PRO A 27 REMARK 465 GLU A 28 REMARK 465 LEU A 29 REMARK 465 VAL A 30 REMARK 465 GLY A 31 REMARK 465 LEU A 32 REMARK 465 PRO A 33 REMARK 465 ARG A 34 REMARK 465 GLN A 35 REMARK 465 GLU A 36 REMARK 465 VAL A 37 REMARK 465 HIS A 38 REMARK 465 VAL A 39 REMARK 465 GLU A 40 REMARK 465 GLN A 41 REMARK 465 ALA A 42 REMARK 465 PRO A 43 REMARK 465 LEU A 44 REMARK 465 LEU A 45 REMARK 465 SER A 46 REMARK 465 ARG A 47 REMARK 465 LEU A 48 REMARK 465 GLN A 49 REMARK 465 GLU A 50 REMARK 465 GLY A 51 REMARK 465 PRO A 52 REMARK 465 VAL A 75 REMARK 465 SER A 76 REMARK 465 LYS A 77 REMARK 465 PRO A 78 REMARK 465 SER A 79 REMARK 465 HIS A 80 REMARK 465 PRO A 81 REMARK 465 LEU A 82 REMARK 465 PHE A 83 REMARK 465 ASP A 84 REMARK 465 ASP A 85 REMARK 465 PRO A 86 REMARK 465 MET A 87 REMARK 465 PHE A 88 REMARK 465 ARG A 89 REMARK 465 ARG A 90 REMARK 465 PHE A 91 REMARK 465 PHE A 92 REMARK 465 GLY A 93 REMARK 465 ASP A 94 REMARK 465 ASN A 95 REMARK 465 LEU A 96 REMARK 465 PRO A 97 REMARK 465 GLN A 98 REMARK 465 GLN A 99 REMARK 465 LYS A 100 REMARK 465 ARG A 101 REMARK 465 MET A 102 REMARK 465 ALA A 378 REMARK 465 PRO A 379 REMARK 465 ALA A 380 REMARK 465 PRO A 381 REMARK 465 GLN A 382 REMARK 465 GLN A 383 REMARK 465 LYS A 384 REMARK 465 GLN A 385 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 442 O HOH A 520 1.65 REMARK 500 O HOH A 515 O HOH A 535 1.78 REMARK 500 O HOH A 433 O HOH A 533 1.88 REMARK 500 O HOH A 485 O HOH A 513 1.94 REMARK 500 OD1 ASN A 366 O HOH A 401 1.94 REMARK 500 O VAL A 53 O HOH A 402 1.94 REMARK 500 OG SER A 355 O HOH A 403 1.96 REMARK 500 O HOH A 548 O HOH A 550 1.98 REMARK 500 O HOH A 508 O HOH A 548 2.04 REMARK 500 O ILE A 327 O HOH A 404 2.06 REMARK 500 O ASN A 205 O HOH A 405 2.07 REMARK 500 O GLU A 334 O HOH A 406 2.08 REMARK 500 OD1 ASN A 57 O HOH A 407 2.12 REMARK 500 NE2 GLN A 363 O HOH A 408 2.13 REMARK 500 O HOH A 418 O HOH A 431 2.15 REMARK 500 O HOH A 427 O HOH A 475 2.17 REMARK 500 O HOH A 544 O HOH A 549 2.17 REMARK 500 O HOH A 518 O HOH A 559 2.18 REMARK 500 ND2 ASN A 366 O HOH A 409 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CB LEU A 322 CD1 LEU A 322 10445 2.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 VAL A 307 CB VAL A 307 CG2 -0.181 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 293 CB - CG - CD1 ANGL. DEV. = 10.6 DEGREES REMARK 500 LEU A 293 CB - CG - CD2 ANGL. DEV. = -17.1 DEGREES REMARK 500 LEU A 322 CA - CB - CG ANGL. DEV. = 16.3 DEGREES REMARK 500 LYS A 332 CD - CE - NZ ANGL. DEV. = -14.5 DEGREES REMARK 500 ARG A 374 CG - CD - NE ANGL. DEV. = 14.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 188 14.98 53.39 REMARK 500 ALA A 201 162.49 178.32 REMARK 500 ASP A 214 45.38 -154.48 REMARK 500 THR A 243 -51.14 -133.70 REMARK 500 VAL A 286 141.21 -174.55 REMARK 500 ASP A 313 -0.01 74.64 REMARK 500 LYS A 332 -15.70 76.53 REMARK 500 ALA A 335 49.83 -93.59 REMARK 500 VAL A 365 110.62 -160.04 REMARK 500 PRO A 375 -175.98 -65.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 564 DISTANCE = 6.10 ANGSTROMS REMARK 525 HOH A 565 DISTANCE = 7.48 ANGSTROMS DBREF 7CO3 C 1 3 PDB 7CO3 7CO3 1 3 DBREF 7CO3 A 1 389 UNP Q9HVX1 Q9HVX1_PSEAE 1 389 SEQADV 7CO3 ALA A 227 UNP Q9HVX1 SER 227 ENGINEERED MUTATION SEQRES 1 C 3 TRP VAL PHE SEQRES 1 A 389 MET PRO LYS ALA LEU ARG PHE LEU GLY TRP PRO VAL LEU SEQRES 2 A 389 VAL GLY VAL LEU LEU ALA LEU LEU ILE ILE GLN HIS ASN SEQRES 3 A 389 PRO GLU LEU VAL GLY LEU PRO ARG GLN GLU VAL HIS VAL SEQRES 4 A 389 GLU GLN ALA PRO LEU LEU SER ARG LEU GLN GLU GLY PRO SEQRES 5 A 389 VAL SER TYR ALA ASN ALA VAL SER ARG ALA ALA PRO ALA SEQRES 6 A 389 VAL ALA ASN LEU TYR THR THR LYS MET VAL SER LYS PRO SEQRES 7 A 389 SER HIS PRO LEU PHE ASP ASP PRO MET PHE ARG ARG PHE SEQRES 8 A 389 PHE GLY ASP ASN LEU PRO GLN GLN LYS ARG MET GLU SER SEQRES 9 A 389 SER LEU GLY SER ALA VAL ILE MET SER ALA GLU GLY TYR SEQRES 10 A 389 LEU LEU THR ASN ASN HIS VAL THR ALA GLY ALA ASP GLN SEQRES 11 A 389 ILE ILE VAL ALA LEU ARG ASP GLY ARG GLU THR ILE ALA SEQRES 12 A 389 GLN LEU VAL GLY SER ASP PRO GLU THR ASP LEU ALA VAL SEQRES 13 A 389 LEU LYS ILE ASP LEU LYS ASN LEU PRO ALA MET THR LEU SEQRES 14 A 389 GLY ARG SER ASP GLY ILE ARG THR GLY ASP VAL CYS LEU SEQRES 15 A 389 ALA ILE GLY ASN PRO PHE GLY VAL GLY GLN THR VAL THR SEQRES 16 A 389 MET GLY ILE ILE SER ALA THR GLY ARG ASN GLN LEU GLY SEQRES 17 A 389 LEU ASN THR TYR GLU ASP PHE ILE GLN THR ASP ALA ALA SEQRES 18 A 389 ILE ASN PRO GLY ASN ALA GLY GLY ALA LEU VAL ASP ALA SEQRES 19 A 389 ALA GLY ASN LEU ILE GLY ILE ASN THR ALA ILE PHE SER SEQRES 20 A 389 LYS SER GLY GLY SER GLN GLY ILE GLY PHE ALA ILE PRO SEQRES 21 A 389 THR LYS LEU ALA LEU GLU VAL MET GLN SER ILE ILE GLU SEQRES 22 A 389 HIS GLY GLN VAL ILE ARG GLY TRP LEU GLY VAL GLU VAL SEQRES 23 A 389 LYS ALA LEU THR PRO GLU LEU ALA GLU SER LEU GLY LEU SEQRES 24 A 389 GLY GLU THR ALA GLY ILE VAL VAL ALA GLY VAL TYR ARG SEQRES 25 A 389 ASP GLY PRO ALA ALA ARG GLY GLY LEU LEU PRO GLY ASP SEQRES 26 A 389 VAL ILE LEU THR ILE ASP LYS GLN GLU ALA SER ASP GLY SEQRES 27 A 389 ARG ARG SER MET ASN GLN VAL ALA ARG THR ARG PRO GLY SEQRES 28 A 389 GLN LYS ILE SER ILE VAL VAL LEU ARG ASN GLY GLN LYS SEQRES 29 A 389 VAL ASN LEU THR ALA GLU VAL GLY LEU ARG PRO PRO PRO SEQRES 30 A 389 ALA PRO ALA PRO GLN GLN LYS GLN ASP GLY GLY GLU FORMUL 3 HOH *165(H2 O) HELIX 1 AA1 TYR A 55 ALA A 63 1 9 HELIX 2 AA2 ASN A 121 ALA A 126 1 6 HELIX 3 AA3 ASN A 186 VAL A 190 5 5 HELIX 4 AA4 THR A 261 GLY A 275 1 15 HELIX 5 AA5 THR A 290 LEU A 297 1 8 HELIX 6 AA6 GLY A 314 GLY A 319 1 6 HELIX 7 AA7 ASP A 337 ARG A 347 1 11 SHEET 1 AA1 7 GLU A 140 ILE A 142 0 SHEET 2 AA1 7 GLN A 130 ALA A 134 -1 N VAL A 133 O THR A 141 SHEET 3 AA1 7 VAL A 66 THR A 72 -1 N TYR A 70 O ILE A 132 SHEET 4 AA1 7 SER A 104 SER A 113 -1 O SER A 105 N THR A 71 SHEET 5 AA1 7 TYR A 117 THR A 120 -1 O LEU A 119 N VAL A 110 SHEET 6 AA1 7 LEU A 154 LYS A 158 -1 O LEU A 157 N LEU A 118 SHEET 7 AA1 7 GLN A 144 ASP A 149 -1 N ASP A 149 O LEU A 154 SHEET 1 AA2 8 GLY A 387 GLU A 389 0 SHEET 2 AA2 8 LEU A 238 PHE A 246 1 N ILE A 245 O GLY A 387 SHEET 3 AA2 8 GLY A 256 PRO A 260 -1 O ILE A 259 N ILE A 241 SHEET 4 AA2 8 PHE A 215 THR A 218 -1 N ILE A 216 O ALA A 258 SHEET 5 AA2 8 THR A 193 ARG A 204 -1 N ARG A 204 O PHE A 215 SHEET 6 AA2 8 VAL A 180 GLY A 185 -1 N GLY A 185 O THR A 193 SHEET 7 AA2 8 ALA A 230 ASP A 233 -1 O VAL A 232 N LEU A 182 SHEET 8 AA2 8 LEU A 238 PHE A 246 -1 O ILE A 239 N LEU A 231 SHEET 1 AA3 2 GLY A 280 TRP A 281 0 SHEET 2 AA3 2 GLY A 372 LEU A 373 -1 O GLY A 372 N TRP A 281 SHEET 1 AA4 4 GLN A 333 GLU A 334 0 SHEET 2 AA4 4 ILE A 327 ILE A 330 -1 N ILE A 330 O GLN A 333 SHEET 3 AA4 4 LYS A 353 VAL A 358 -1 O VAL A 357 N THR A 329 SHEET 4 AA4 4 ASN A 366 GLU A 370 -1 O LEU A 367 N ILE A 356 CRYST1 96.614 96.614 119.550 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010350 0.005976 0.000000 0.00000 SCALE2 0.000000 0.011952 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008365 0.00000