HEADER VIRAL PROTEIN 05-AUG-20 7COT TITLE STRUCTURE OF POST FUSION CORE OF SARS-COV-2 S2 SUBUNIT COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPIKE GLYCOPROTEIN; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: S GLYCOPROTEIN,E2,PEPLOMER PROTEIN,S GLYCOPROTEIN,E2, COMPND 5 PEPLOMER PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: POST FUSION CORE OF SARS-COV-2 S2 SUBUNIT SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_COMMON: 2019-NCOV; SOURCE 5 ORGANISM_TAXID: 2697049; SOURCE 6 GENE: S, 2; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS COVID-19, SARS-COV-2, SPIKE PROTEIN, HEPTAD REPEAT, MEMBRANE FUSION, KEYWDS 2 POST FUSION CORE, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.H.LIN,K.P.TAN,C.H.HSU REVDAT 2 29-NOV-23 7COT 1 REMARK REVDAT 1 18-AUG-21 7COT 0 JRNL AUTH K.P.TAN,M.H.LIN,P.C.KUO,C.H.HSU JRNL TITL CRYSTAL STRUCTURE OF POST FUSION CORE OF SARS-COV-2 S2 JRNL TITL 2 SUBUNIT JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.16 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.16 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.36 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.890 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 3 NUMBER OF REFLECTIONS : 17832 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.940 REMARK 3 FREE R VALUE TEST SET COUNT : 1772 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.3600 - 5.0600 0.96 1272 135 0.2701 0.2750 REMARK 3 2 5.0600 - 4.0200 0.99 1311 146 0.1786 0.2411 REMARK 3 3 4.0100 - 3.5200 0.98 1287 136 0.1796 0.2407 REMARK 3 4 3.5100 - 3.1900 0.99 1301 144 0.1965 0.2427 REMARK 3 5 3.1900 - 2.9700 0.99 1340 147 0.1892 0.2299 REMARK 3 6 2.9600 - 2.7900 0.98 1277 150 0.1724 0.2215 REMARK 3 7 2.7900 - 2.6500 0.99 1268 133 0.1983 0.2555 REMARK 3 8 2.6500 - 2.5300 0.97 1278 156 0.1906 0.2353 REMARK 3 9 2.5300 - 2.4400 0.95 1261 135 0.1813 0.2427 REMARK 3 10 2.4400 - 2.3500 0.91 1170 124 0.1887 0.2580 REMARK 3 11 2.3500 - 2.2800 0.89 1175 123 0.1956 0.2783 REMARK 3 12 2.2800 - 2.2100 0.83 1129 139 0.2126 0.2608 REMARK 3 13 2.2100 - 2.1600 0.78 991 104 0.2183 0.2500 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.470 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.22 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.34 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: 0.4800 REMARK 3 OPERATOR: H,-H-K,-L REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 3:76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.374 -11.096 -6.300 REMARK 3 T TENSOR REMARK 3 T11: 0.1081 T22: 0.0727 REMARK 3 T33: 0.0878 T12: 0.0132 REMARK 3 T13: -0.0021 T23: 0.0172 REMARK 3 L TENSOR REMARK 3 L11: 0.2420 L22: 0.2735 REMARK 3 L33: 0.7327 L12: -0.0213 REMARK 3 L13: -0.2718 L23: 0.1442 REMARK 3 S TENSOR REMARK 3 S11: -0.0389 S12: 0.0487 S13: 0.1498 REMARK 3 S21: -0.0219 S22: -0.0834 S23: -0.1027 REMARK 3 S31: -0.1252 S32: 0.2908 S33: -0.3617 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 77:94 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.394 -14.002 -44.800 REMARK 3 T TENSOR REMARK 3 T11: 0.5283 T22: 0.7947 REMARK 3 T33: 0.2104 T12: 0.0651 REMARK 3 T13: -0.0151 T23: 0.0430 REMARK 3 L TENSOR REMARK 3 L11: 0.2210 L22: 0.0033 REMARK 3 L33: 0.2529 L12: -0.0949 REMARK 3 L13: -0.1735 L23: 0.0066 REMARK 3 S TENSOR REMARK 3 S11: 0.1519 S12: 0.0803 S13: 0.1173 REMARK 3 S21: -0.2603 S22: -0.1432 S23: 0.0339 REMARK 3 S31: -0.0801 S32: -0.1741 S33: -0.0328 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 95:126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.314 -5.791 7.518 REMARK 3 T TENSOR REMARK 3 T11: 0.2157 T22: 0.0474 REMARK 3 T33: 0.1963 T12: 0.0223 REMARK 3 T13: -0.0225 T23: -0.0288 REMARK 3 L TENSOR REMARK 3 L11: 0.9293 L22: 0.2549 REMARK 3 L33: 0.8756 L12: -0.0695 REMARK 3 L13: -0.1710 L23: 0.1471 REMARK 3 S TENSOR REMARK 3 S11: -0.1535 S12: -0.1390 S13: 0.3129 REMARK 3 S21: 0.0708 S22: -0.1363 S23: 0.0281 REMARK 3 S31: -0.5116 S32: -0.5018 S33: -0.1036 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN B AND RESID 3:76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.379 11.107 6.313 REMARK 3 T TENSOR REMARK 3 T11: 0.1174 T22: 0.0964 REMARK 3 T33: 0.1345 T12: -0.0058 REMARK 3 T13: 0.0034 T23: 0.0077 REMARK 3 L TENSOR REMARK 3 L11: 0.2492 L22: 0.2653 REMARK 3 L33: 0.3065 L12: -0.0422 REMARK 3 L13: 0.3742 L23: 0.1599 REMARK 3 S TENSOR REMARK 3 S11: 0.0977 S12: -0.0617 S13: -0.0326 REMARK 3 S21: 0.0118 S22: 0.1009 S23: -0.0846 REMARK 3 S31: 0.3142 S32: 0.3642 S33: 0.0819 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN B AND RESID 77:94 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.195 14.008 44.570 REMARK 3 T TENSOR REMARK 3 T11: 0.3031 T22: 0.8202 REMARK 3 T33: -0.8667 T12: -0.3778 REMARK 3 T13: 0.4930 T23: 0.4210 REMARK 3 L TENSOR REMARK 3 L11: 0.0935 L22: 0.2696 REMARK 3 L33: 0.3450 L12: -0.1111 REMARK 3 L13: -0.0590 L23: 0.1442 REMARK 3 S TENSOR REMARK 3 S11: 0.1275 S12: -0.3191 S13: -0.4011 REMARK 3 S21: -0.1971 S22: -0.3213 S23: -0.0385 REMARK 3 S31: -0.0740 S32: -0.3975 S33: -0.0418 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN B AND RESID 95:126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.303 5.805 -7.551 REMARK 3 T TENSOR REMARK 3 T11: 0.2106 T22: 0.0684 REMARK 3 T33: 0.1502 T12: -0.0112 REMARK 3 T13: 0.0165 T23: -0.0051 REMARK 3 L TENSOR REMARK 3 L11: 1.0528 L22: 0.6126 REMARK 3 L33: 0.6781 L12: -0.0303 REMARK 3 L13: 0.2206 L23: 0.0118 REMARK 3 S TENSOR REMARK 3 S11: -0.2791 S12: 0.1218 S13: -0.3415 REMARK 3 S21: -0.1438 S22: -0.2346 S23: 0.1625 REMARK 3 S31: 0.6584 S32: -0.3237 S33: -0.1167 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN C AND RESID 2:103 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.870 1.212 -40.671 REMARK 3 T TENSOR REMARK 3 T11: 0.8547 T22: 0.8468 REMARK 3 T33: 0.5766 T12: 0.0429 REMARK 3 T13: 0.0112 T23: -0.0364 REMARK 3 L TENSOR REMARK 3 L11: -0.2409 L22: -0.3963 REMARK 3 L33: 0.3013 L12: 0.2892 REMARK 3 L13: 0.3145 L23: 0.3443 REMARK 3 S TENSOR REMARK 3 S11: -0.1326 S12: 0.1023 S13: -0.1102 REMARK 3 S21: 0.0729 S22: 0.0360 S23: -0.2442 REMARK 3 S31: -0.8166 S32: 0.4706 S33: -0.0332 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: ( CHAIN C AND RESID 104:126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.306 4.956 -18.416 REMARK 3 T TENSOR REMARK 3 T11: 0.7287 T22: 1.2661 REMARK 3 T33: 0.9151 T12: -0.0859 REMARK 3 T13: 0.1165 T23: -0.0683 REMARK 3 L TENSOR REMARK 3 L11: 0.0280 L22: 0.1746 REMARK 3 L33: 0.7422 L12: 0.0064 REMARK 3 L13: 0.2972 L23: 0.0029 REMARK 3 S TENSOR REMARK 3 S11: -0.4626 S12: 0.3086 S13: 0.0880 REMARK 3 S21: -0.2834 S22: 0.2485 S23: -0.0881 REMARK 3 S31: 0.1382 S32: 0.2879 S33: -0.0033 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7COT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-AUG-20. REMARK 100 THE DEPOSITION ID IS D_1300017196. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-MAY-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : TPS 05A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99984 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18634 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.160 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 2.600 REMARK 200 R MERGE (I) : 0.08800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.5500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.16 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.51000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1WYY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 3350, 0.07M BIS-TRIS PROPANE REMARK 280 PH 8.5, 0.03M CITRIC ACID, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 283K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -97.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 25.98400 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -45.00561 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 51.96800 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -98.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 51.96800 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 25.98400 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 45.00561 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -86.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 244 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 245 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 244 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 245 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 VAL A 2 REMARK 465 GLU A 79 REMARK 465 SER A 80 REMARK 465 GLY A 81 REMARK 465 GLY A 82 REMARK 465 ARG A 83 REMARK 465 GLY A 84 REMARK 465 GLY A 85 REMARK 465 PRO A 86 REMARK 465 LEU A 127 REMARK 465 GLY A 128 REMARK 465 LYS A 129 REMARK 465 TYR A 130 REMARK 465 GLY B 1 REMARK 465 VAL B 2 REMARK 465 GLU B 79 REMARK 465 SER B 80 REMARK 465 GLY B 81 REMARK 465 GLY B 82 REMARK 465 ARG B 83 REMARK 465 GLY B 84 REMARK 465 GLY B 85 REMARK 465 PRO B 86 REMARK 465 LEU B 127 REMARK 465 GLY B 128 REMARK 465 LYS B 129 REMARK 465 TYR B 130 REMARK 465 GLY C 1 REMARK 465 ASP C 76 REMARK 465 LYS C 77 REMARK 465 VAL C 78 REMARK 465 GLU C 79 REMARK 465 SER C 80 REMARK 465 GLY C 81 REMARK 465 GLY C 82 REMARK 465 ARG C 83 REMARK 465 GLY C 84 REMARK 465 GLY C 85 REMARK 465 PRO C 86 REMARK 465 ASP C 87 REMARK 465 VAL C 88 REMARK 465 ASP C 89 REMARK 465 LEU C 90 REMARK 465 GLY C 91 REMARK 465 LEU C 127 REMARK 465 GLY C 128 REMARK 465 LYS C 129 REMARK 465 TYR C 130 DBREF 7COT A 1 79 UNP P0DTC2 SPIKE_SARS2 910 988 DBREF 7COT A 86 130 UNP P0DTC2 SPIKE_SARS2 1162 1206 DBREF 7COT B 1 79 UNP P0DTC2 SPIKE_SARS2 910 988 DBREF 7COT B 86 130 UNP P0DTC2 SPIKE_SARS2 1162 1206 DBREF 7COT C 1 79 UNP P0DTC2 SPIKE_SARS2 910 988 DBREF 7COT C 86 130 UNP P0DTC2 SPIKE_SARS2 1162 1206 SEQADV 7COT SER A 80 UNP P0DTC2 LINKER SEQADV 7COT GLY A 81 UNP P0DTC2 LINKER SEQADV 7COT GLY A 82 UNP P0DTC2 LINKER SEQADV 7COT ARG A 83 UNP P0DTC2 LINKER SEQADV 7COT GLY A 84 UNP P0DTC2 LINKER SEQADV 7COT GLY A 85 UNP P0DTC2 LINKER SEQADV 7COT SER B 80 UNP P0DTC2 LINKER SEQADV 7COT GLY B 81 UNP P0DTC2 LINKER SEQADV 7COT GLY B 82 UNP P0DTC2 LINKER SEQADV 7COT ARG B 83 UNP P0DTC2 LINKER SEQADV 7COT GLY B 84 UNP P0DTC2 LINKER SEQADV 7COT GLY B 85 UNP P0DTC2 LINKER SEQADV 7COT SER C 80 UNP P0DTC2 LINKER SEQADV 7COT GLY C 81 UNP P0DTC2 LINKER SEQADV 7COT GLY C 82 UNP P0DTC2 LINKER SEQADV 7COT ARG C 83 UNP P0DTC2 LINKER SEQADV 7COT GLY C 84 UNP P0DTC2 LINKER SEQADV 7COT GLY C 85 UNP P0DTC2 LINKER SEQRES 1 A 130 GLY VAL THR GLN ASN VAL LEU TYR GLU ASN GLN LYS LEU SEQRES 2 A 130 ILE ALA ASN GLN PHE ASN SER ALA ILE GLY LYS ILE GLN SEQRES 3 A 130 ASP SER LEU SER SER THR ALA SER ALA LEU GLY LYS LEU SEQRES 4 A 130 GLN ASP VAL VAL ASN GLN ASN ALA GLN ALA LEU ASN THR SEQRES 5 A 130 LEU VAL LYS GLN LEU SER SER ASN PHE GLY ALA ILE SER SEQRES 6 A 130 SER VAL LEU ASN ASP ILE LEU SER ARG LEU ASP LYS VAL SEQRES 7 A 130 GLU SER GLY GLY ARG GLY GLY PRO ASP VAL ASP LEU GLY SEQRES 8 A 130 ASP ILE SER GLY ILE ASN ALA SER VAL VAL ASN ILE GLN SEQRES 9 A 130 LYS GLU ILE ASP ARG LEU ASN GLU VAL ALA LYS ASN LEU SEQRES 10 A 130 ASN GLU SER LEU ILE ASP LEU GLN GLU LEU GLY LYS TYR SEQRES 1 B 130 GLY VAL THR GLN ASN VAL LEU TYR GLU ASN GLN LYS LEU SEQRES 2 B 130 ILE ALA ASN GLN PHE ASN SER ALA ILE GLY LYS ILE GLN SEQRES 3 B 130 ASP SER LEU SER SER THR ALA SER ALA LEU GLY LYS LEU SEQRES 4 B 130 GLN ASP VAL VAL ASN GLN ASN ALA GLN ALA LEU ASN THR SEQRES 5 B 130 LEU VAL LYS GLN LEU SER SER ASN PHE GLY ALA ILE SER SEQRES 6 B 130 SER VAL LEU ASN ASP ILE LEU SER ARG LEU ASP LYS VAL SEQRES 7 B 130 GLU SER GLY GLY ARG GLY GLY PRO ASP VAL ASP LEU GLY SEQRES 8 B 130 ASP ILE SER GLY ILE ASN ALA SER VAL VAL ASN ILE GLN SEQRES 9 B 130 LYS GLU ILE ASP ARG LEU ASN GLU VAL ALA LYS ASN LEU SEQRES 10 B 130 ASN GLU SER LEU ILE ASP LEU GLN GLU LEU GLY LYS TYR SEQRES 1 C 130 GLY VAL THR GLN ASN VAL LEU TYR GLU ASN GLN LYS LEU SEQRES 2 C 130 ILE ALA ASN GLN PHE ASN SER ALA ILE GLY LYS ILE GLN SEQRES 3 C 130 ASP SER LEU SER SER THR ALA SER ALA LEU GLY LYS LEU SEQRES 4 C 130 GLN ASP VAL VAL ASN GLN ASN ALA GLN ALA LEU ASN THR SEQRES 5 C 130 LEU VAL LYS GLN LEU SER SER ASN PHE GLY ALA ILE SER SEQRES 6 C 130 SER VAL LEU ASN ASP ILE LEU SER ARG LEU ASP LYS VAL SEQRES 7 C 130 GLU SER GLY GLY ARG GLY GLY PRO ASP VAL ASP LEU GLY SEQRES 8 C 130 ASP ILE SER GLY ILE ASN ALA SER VAL VAL ASN ILE GLN SEQRES 9 C 130 LYS GLU ILE ASP ARG LEU ASN GLU VAL ALA LYS ASN LEU SEQRES 10 C 130 ASN GLU SER LEU ILE ASP LEU GLN GLU LEU GLY LYS TYR FORMUL 4 HOH *96(H2 O) HELIX 1 AA1 THR A 3 LYS A 77 1 75 HELIX 2 AA2 ILE A 103 LEU A 117 1 15 HELIX 3 AA3 ASN A 118 LEU A 121 5 4 HELIX 4 AA4 GLN B 4 LYS B 77 1 74 HELIX 5 AA5 ILE B 103 LEU B 117 1 15 HELIX 6 AA6 ASN B 118 LEU B 121 5 4 HELIX 7 AA7 THR C 3 LEU C 75 1 73 HELIX 8 AA8 ILE C 103 LEU C 117 1 15 HELIX 9 AA9 ASN C 118 LEU C 121 5 4 CRYST1 51.968 51.968 116.225 90.00 90.00 120.00 P 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019243 0.011110 0.000000 0.00000 SCALE2 0.000000 0.022219 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008604 0.00000