HEADER HYDROLASE 15-AUG-20 7CSN TITLE CRYSTAL STRUCTURE OF PEPTIDYL-TRNA HYDROLASE FROM ACINETOBACTER TITLE 2 BAUMANNII AT 1.00 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDYL-TRNA HYDROLASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PTH; COMPND 5 EC: 3.1.1.29; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACINETOBACTER BAUMANNII (STRAIN ATCC 19606 / SOURCE 3 DSM 30007 / CIP 70.34 / JCM 6841 / NBRC 109757 / NCIMB 12457 / NCTC SOURCE 4 12156 / 81); SOURCE 5 ORGANISM_TAXID: 575584; SOURCE 6 STRAIN: ATCC 19606 / DSM 30007 / CIP 70.34 / JCM 6841 / NBRC 109757 SOURCE 7 / NCIMB 12457 / NCTC 12156 / 81; SOURCE 8 GENE: PTH, HMPREF0010_01329; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR V.VISWANATHAN,P.SHARMA,P.K.SINGH,P.KAUR,S.SHARMA,T.P.SINGH REVDAT 2 29-NOV-23 7CSN 1 REMARK REVDAT 1 02-SEP-20 7CSN 0 JRNL AUTH V.VISWANATHAN,P.SHARMA,P.K.SINGH,P.KAUR,S.SHARMA,T.P.SINGH JRNL TITL CRYSTAL STRUCTURE OF PEPTIDYL-TRNA HYDROLASE FROM JRNL TITL 2 ACINETOBACTER BAUMANNII AT 1.00 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.15 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 3 NUMBER OF REFLECTIONS : 89426 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.145 REMARK 3 FREE R VALUE : 0.157 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.054 REMARK 3 FREE R VALUE TEST SET COUNT : 4520 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.03 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4521 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 69.99 REMARK 3 BIN R VALUE (WORKING SET) : 0.3550 REMARK 3 BIN FREE R VALUE SET COUNT : 249 REMARK 3 BIN FREE R VALUE : 0.3700 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1496 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 239 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.12200 REMARK 3 B22 (A**2) : 0.20000 REMARK 3 B33 (A**2) : -0.07800 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.024 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.023 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.020 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.896 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.979 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.978 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1578 ; 0.026 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 1451 ; 0.010 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2144 ; 2.514 ; 1.632 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3391 ; 1.794 ; 1.575 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 207 ; 6.564 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 84 ;34.865 ;22.857 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 266 ;12.552 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;15.941 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 199 ; 0.158 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1813 ; 0.013 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 314 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 322 ; 0.242 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 38 ; 0.239 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 777 ; 0.183 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 127 ; 0.246 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 795 ;12.242 ; 1.212 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 794 ;12.249 ; 1.210 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 995 ;10.896 ; 1.789 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 996 ;10.892 ; 1.790 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 783 ;14.984 ; 1.706 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 783 ;14.984 ; 1.704 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1143 ;13.717 ; 2.308 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1143 ;13.716 ; 2.306 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 3029 ;39.083 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -2 A 538 REMARK 3 ORIGIN FOR THE GROUP (A): 7.3331 8.8338 15.6639 REMARK 3 T TENSOR REMARK 3 T11: 0.0142 T22: 0.0001 REMARK 3 T33: 0.0126 T12: -0.0002 REMARK 3 T13: 0.0001 T23: -0.0002 REMARK 3 L TENSOR REMARK 3 L11: 0.0384 L22: 0.0277 REMARK 3 L33: 0.0239 L12: -0.0087 REMARK 3 L13: 0.0083 L23: -0.0145 REMARK 3 S TENSOR REMARK 3 S11: 0.0001 S12: -0.0020 S13: -0.0001 REMARK 3 S21: 0.0007 S22: 0.0003 S23: 0.0007 REMARK 3 S31: -0.0003 S32: -0.0010 S33: -0.0004 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 7CSN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-AUG-20. REMARK 100 THE DEPOSITION ID IS D_1300018180. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-AUG-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9720 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 90567 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.000 REMARK 200 RESOLUTION RANGE LOW (A) : 33.150 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 200 DATA REDUNDANCY : 9.500 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 8.50 REMARK 200 R MERGE FOR SHELL (I) : 0.79000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 6J93 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12% PEG 1500, 0.1M HEPES, PH 7.5, 20% REMARK 280 GLYCEROL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 17.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.11500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.12500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 38.11500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 17.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.12500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 30 O HOH A 302 1.97 REMARK 500 O TYR A 83 O HOH A 303 2.05 REMARK 500 O HOH A 325 O HOH A 456 2.09 REMARK 500 OD2 ASP A 98 O HOH A 304 2.09 REMARK 500 O HOH A 482 O HOH A 497 2.11 REMARK 500 OD1 ASP A 98 O HOH A 305 2.19 REMARK 500 O HOH A 398 O HOH A 429 2.19 REMARK 500 NE ARG A 119 O HOH A 306 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ASN A 3 C ASN A 3 O -0.310 REMARK 500 ARG A 61 NE ARG A 61 CZ -0.093 REMARK 500 GLY A 137 N GLY A 137 CA 0.092 REMARK 500 GLY A 140 C GLY A 140 O 0.130 REMARK 500 GLU A 143 C GLU A 143 O 0.394 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASN A 3 O - C - N ANGL. DEV. = -10.8 DEGREES REMARK 500 TYR A 17 CB - CG - CD2 ANGL. DEV. = -7.9 DEGREES REMARK 500 TYR A 17 CB - CG - CD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 TYR A 17 OH - CZ - CE2 ANGL. DEV. = -16.4 DEGREES REMARK 500 ARG A 61 NE - CZ - NH1 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG A 105 NE - CZ - NH2 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG A 133 NE - CZ - NH1 ANGL. DEV. = -4.6 DEGREES REMARK 500 ARG A 133 NE - CZ - NH2 ANGL. DEV. = 3.8 DEGREES REMARK 500 GLU A 143 CB - CA - C ANGL. DEV. = 13.0 DEGREES REMARK 500 ARG A 144 NE - CZ - NH1 ANGL. DEV. = -7.7 DEGREES REMARK 500 ARG A 144 NE - CZ - NH2 ANGL. DEV. = 4.0 DEGREES REMARK 500 ALA A 189 CA - C - N ANGL. DEV. = 17.2 DEGREES REMARK 500 ALA A 189 O - C - N ANGL. DEV. = -12.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 1 -143.52 59.56 REMARK 500 TYR A 68 149.49 80.30 REMARK 500 ASN A 128 31.57 -81.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLU A 143 14.15 REMARK 500 REMARK 500 REMARK: NULL DBREF 7CSN A 1 193 UNP D0C9L6 D0C9L6_ACIB2 1 193 SEQADV 7CSN GLY A -2 UNP D0C9L6 EXPRESSION TAG SEQADV 7CSN SER A -1 UNP D0C9L6 EXPRESSION TAG SEQADV 7CSN HIS A 0 UNP D0C9L6 EXPRESSION TAG SEQRES 1 A 196 GLY SER HIS MET SER ASN ILE SER LEU ILE VAL GLY LEU SEQRES 2 A 196 GLY ASN PRO GLY SER GLU TYR ALA GLN THR ARG HIS ASN SEQRES 3 A 196 ALA GLY PHE TRP PHE VAL GLU GLN LEU ALA ASP LYS TYR SEQRES 4 A 196 GLY ILE THR LEU LYS ASN ASP PRO LYS PHE HIS GLY ILE SEQRES 5 A 196 SER GLY ARG GLY ASN ILE GLU GLY HIS ASP VAL ARG LEU SEQRES 6 A 196 LEU LEU PRO MET THR TYR MET ASN ARG SER GLY GLN SER SEQRES 7 A 196 VAL VAL PRO PHE SER LYS PHE TYR GLN ILE ALA PRO GLU SEQRES 8 A 196 ALA ILE LEU ILE ALA HIS ASP GLU LEU ASP MET ASN PRO SEQRES 9 A 196 GLY VAL ILE ARG LEU LYS THR GLY GLY GLY HIS GLY GLY SEQRES 10 A 196 HIS ASN GLY LEU ARG ASP ILE VAL PRO HIS ILE GLY PRO SEQRES 11 A 196 ASN PHE HIS ARG LEU ARG ILE GLY ILE GLY HIS PRO GLY SEQRES 12 A 196 SER LYS GLU ARG VAL SER GLY HIS VAL LEU GLY LYS ALA SEQRES 13 A 196 PRO SER ASN GLU GLN SER LEU MET ASP GLY ALA ILE ASP SEQRES 14 A 196 HIS ALA LEU SER LYS VAL LYS LEU LEU VAL GLN GLY GLN SEQRES 15 A 196 VAL PRO GLN ALA MET ASN GLN ILE ASN ALA TYR LYS PRO SEQRES 16 A 196 ALA FORMUL 2 HOH *239(H2 O) HELIX 1 AA1 THR A 20 HIS A 22 5 3 HELIX 2 AA2 ASN A 23 GLY A 37 1 15 HELIX 3 AA3 PRO A 44 PHE A 46 5 3 HELIX 4 AA4 TYR A 68 ARG A 71 5 4 HELIX 5 AA5 SER A 72 TYR A 83 1 12 HELIX 6 AA6 ALA A 86 GLU A 88 5 3 HELIX 7 AA7 HIS A 115 ASP A 120 1 6 HELIX 8 AA8 ILE A 121 GLY A 126 1 6 HELIX 9 AA9 ARG A 144 LEU A 150 1 7 HELIX 10 AB1 PRO A 154 SER A 170 1 17 HELIX 11 AB2 LYS A 171 GLN A 177 1 7 HELIX 12 AB3 GLN A 179 ALA A 189 1 11 SHEET 1 AA1 7 LYS A 41 ASP A 43 0 SHEET 2 AA1 7 GLY A 48 ILE A 55 -1 O SER A 50 N LYS A 41 SHEET 3 AA1 7 HIS A 58 PRO A 65 -1 O LEU A 64 N ILE A 49 SHEET 4 AA1 7 LEU A 6 GLY A 9 1 N GLY A 9 O LEU A 63 SHEET 5 AA1 7 ILE A 90 GLU A 96 1 O ALA A 93 N VAL A 8 SHEET 6 AA1 7 HIS A 130 GLY A 135 1 O ILE A 134 N HIS A 94 SHEET 7 AA1 7 ILE A 104 THR A 108 -1 N ARG A 105 O ARG A 133 CRYST1 34.000 66.250 76.230 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.029412 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015094 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013118 0.00000