HEADER HYDROLASE 28-AUG-20 7CWI TITLE CRYSTAL STRUCTURE OF BETA-GALACTOSIDASE II FROM BACILLUS CIRCULANS COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-GALACTOSIDASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS CIRCULANS; SOURCE 3 ORGANISM_TAXID: 1397; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS BETA-GALACTOSIDASE, CARBOHYDRATE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR H.HONG,H.SEO REVDAT 2 29-NOV-23 7CWI 1 REMARK REVDAT 1 09-DEC-20 7CWI 0 JRNL AUTH J.Y.CHOI,H.HONG,H.SEO,J.G.PAN,E.J.KIM,P.J.MAENG,T.H.YANG, JRNL AUTH 2 K.J.KIM JRNL TITL HIGH GALACTO-OLIGOSACCHARIDE PRODUCTION AND A STRUCTURAL JRNL TITL 2 MODEL FOR TRANSGALACTOSYLATION OF BETA-GALACTOSIDASE II FROM JRNL TITL 3 BACILLUS CIRCULANS . JRNL REF J.AGRIC.FOOD CHEM. V. 68 13806 2020 JRNL REFN ESSN 1520-5118 JRNL PMID 33169609 JRNL DOI 10.1021/ACS.JAFC.0C05871 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0253 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.77 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 96434 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.187 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5030 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6692 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.73 REMARK 3 BIN R VALUE (WORKING SET) : 0.2180 REMARK 3 BIN FREE R VALUE SET COUNT : 353 REMARK 3 BIN FREE R VALUE : 0.2430 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6386 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 73 REMARK 3 SOLVENT ATOMS : 645 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.75000 REMARK 3 B22 (A**2) : 0.75000 REMARK 3 B33 (A**2) : -2.43000 REMARK 3 B12 (A**2) : 0.37000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.101 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.101 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.068 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.428 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6648 ; 0.013 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 5853 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9030 ; 1.734 ; 1.645 REMARK 3 BOND ANGLES OTHERS (DEGREES): 13598 ; 1.483 ; 1.580 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 810 ; 7.733 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 366 ;34.963 ;22.869 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1058 ;12.720 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 36 ;20.670 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 841 ; 0.086 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7515 ; 0.012 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1453 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7CWI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-SEP-20. REMARK 100 THE DEPOSITION ID IS D_1300018338. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-OCT-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 7A (6B, 6C1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 101473 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 8.400 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.98 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.4 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : 0.29900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4YPJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, SODIUM REMARK 280 ACETATE/ACETIC ACID PH4, SODIUM CHLORIDE, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.11133 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 32.05567 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 32.05567 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 64.11133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1580 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 804 REMARK 465 ALA A 805 REMARK 465 ASP A 806 REMARK 465 GLN A 807 REMARK 465 LEU A 808 REMARK 465 GLU A 809 REMARK 465 HIS A 810 REMARK 465 HIS A 811 REMARK 465 HIS A 812 REMARK 465 HIS A 813 REMARK 465 HIS A 814 REMARK 465 HIS A 815 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1571 O HOH A 1572 1.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 718 CD GLU A 718 OE1 -0.072 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 702 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 9 41.69 71.50 REMARK 500 ILE A 16 -86.53 -122.14 REMARK 500 THR A 55 -171.41 59.31 REMARK 500 ALA A 77 -4.86 -58.89 REMARK 500 ASN A 136 54.68 -103.86 REMARK 500 TRP A 362 -120.32 -98.85 REMARK 500 ASP A 370 -168.37 -70.82 REMARK 500 LYS A 444 -3.49 75.66 REMARK 500 VAL A 445 -57.06 -122.45 REMARK 500 SER A 491 -81.64 77.54 REMARK 500 HIS A 502 56.80 36.83 REMARK 500 GLU A 558 61.36 34.05 REMARK 500 PRO A 559 32.98 -79.02 REMARK 500 SER A 565 40.42 -144.60 REMARK 500 TYR A 566 128.92 -39.28 REMARK 500 PRO A 603 -155.47 -86.98 REMARK 500 TRP A 607 -159.81 -125.01 REMARK 500 ALA A 694 -35.67 -133.53 REMARK 500 ASN A 777 -165.91 -109.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 903 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 904 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 905 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 906 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 907 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 908 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 909 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 910 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 911 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 912 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 913 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 914 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE HAS BEEN DEPOSITED TO GENBANK WITH ACCESSION NUMBER REMARK 999 QJU69416. DBREF 7CWI A 1 815 PDB 7CWI 7CWI 1 815 SEQRES 1 A 815 MET ARG ARG ILE ASN PHE ASN ASP ASN TRP ARG PHE GLN SEQRES 2 A 815 ARG GLU ILE SER THR SER LEU ARG GLU ALA GLN LYS PRO SEQRES 3 A 815 SER PHE ASN ASP HIS SER TRP ARG GLN LEU SER LEU PRO SEQRES 4 A 815 HIS ASP TRP SER ILE GLU LEU ASP PHE ASN LYS ASP SER SEQRES 5 A 815 LEU ALA THR HIS GLU GLY GLY TYR LEU ASP GLY GLY VAL SEQRES 6 A 815 GLY TRP TYR ARG LYS THR PHE THR VAL PRO SER ALA MET SEQRES 7 A 815 GLU GLY LYS ARG ILE SER LEU ASP PHE ASP GLY VAL TYR SEQRES 8 A 815 MET ASN SER THR THR TYR LEU ASN GLY GLU GLU LEU GLY SEQRES 9 A 815 THR TYR PRO PHE GLY TYR ASN ALA PHE SER TYR ASP ILE SEQRES 10 A 815 THR ASP LYS LEU PHE MET ASP GLY ARG GLU ASN VAL LEU SEQRES 11 A 815 ALA VAL LYS VAL ASP ASN THR GLN PRO SER SER ARG TRP SEQRES 12 A 815 TYR SER GLY SER GLY ILE TYR ARG ASN VAL TYR LEU THR SEQRES 13 A 815 VAL THR ASN PRO VAL HIS VAL ALA ARG TYR GLY THR PHE SEQRES 14 A 815 VAL THR THR PRO ASP LEU GLU SER ALA TYR ALA ALA ARG SEQRES 15 A 815 LYS ALA GLU VAL ASN ILE LYS THR LYS ILE ASN ASN ASP SEQRES 16 A 815 SER ASP ALA ALA VAL GLN VAL LYS VAL LYS SER THR ILE SEQRES 17 A 815 TYR ASP THR ASP GLY LYS GLU VAL ALA SER VAL VAL SER SEQRES 18 A 815 GLN GLU LYS THR ALA ALA ALA GLY THR THR ALA HIS PHE SEQRES 19 A 815 GLU ASP ASN THR VAL ILE GLU ASN PRO GLU LEU TRP SER SEQRES 20 A 815 LEU ASP ASN PRO TYR ARG TYR LYS LEU VAL THR ASP VAL SEQRES 21 A 815 LEU ILE GLY GLY GLU THR VAL ASP THR TYR GLU THR ARG SEQRES 22 A 815 PHE GLY ALA ARG PHE PHE LYS PHE ASP ALA ASN GLU GLY SEQRES 23 A 815 PHE SER LEU ASN GLY LYS PRO MET LYS LEU TYR GLY VAL SEQRES 24 A 815 SER MET HIS HIS ASP LEU GLY ALA LEU GLY ALA ALA THR SEQRES 25 A 815 ASN ALA ARG ALA VAL GLU ARG GLN LEU GLN ILE MET LYS SEQRES 26 A 815 ASP MET GLY VAL ASN ALA ILE ARG GLY THR HIS ASN PRO SEQRES 27 A 815 VAL SER PRO GLU PHE LEU GLU ALA VAL ASN ASN LEU GLY SEQRES 28 A 815 LEU LEU LEU ILE GLU GLU ALA PHE ASP CYS TRP SER GLN SEQRES 29 A 815 SER LYS LYS THR TYR ASP TYR GLY ARG PHE PHE THR ARG SEQRES 30 A 815 TRP ALA GLU HIS ASP VAL LYS GLU MET VAL ASP ARG GLY SEQRES 31 A 815 LYS ASN GLU PRO SER ILE ILE MET TRP SER ILE GLY ASN SEQRES 32 A 815 GLU ILE TYR ASP THR THR SER PRO SER GLY VAL GLU THR SEQRES 33 A 815 ALA ARG ASN LEU VAL ARG TRP ILE LYS GLU ILE ASP THR SEQRES 34 A 815 THR ARG PRO THR THR ILE GLY GLU ASP LYS THR ARG GLY SEQRES 35 A 815 ASP LYS VAL ASN VAL THR PRO ILE ASP PRO ASN ILE LEU SEQRES 36 A 815 GLU ILE PHE HIS THR VAL ASP VAL VAL GLY LEU ASN TYR SEQRES 37 A 815 SER GLU ASN ASN TYR VAL GLY TYR HIS GLU GLN HIS PRO SEQRES 38 A 815 ASN TRP LYS LEU TYR GLY SER GLU THR SER SER ALA THR SEQRES 39 A 815 ARG SER ARG GLY VAL TYR THR HIS PRO TYR GLU TYR ASN SEQRES 40 A 815 LEU GLY THR LYS TYR ASP ASP LEU GLN GLN SER SER TYR SEQRES 41 A 815 ASP ASN ASP TYR VAL PRO TRP GLY ARG THR ALA GLU ASP SEQRES 42 A 815 ALA TRP LYS SER ASP ARG ASP LEU LYS HIS PHE ALA GLY SEQRES 43 A 815 GLN PHE ILE TRP THR GLY PHE ASP TYR ILE GLY GLU PRO SEQRES 44 A 815 THR PRO TYR TYR ASP SER TYR PRO ALA LYS SER SER TYR SEQRES 45 A 815 PHE GLY ALA VAL ASP THR ALA GLY PHE PRO LYS ASP ILE SEQRES 46 A 815 PHE TYR TYR TYR GLN SER GLN TRP LYS LYS GLU PRO MET SEQRES 47 A 815 VAL HIS LEU LEU PRO HIS TRP ASN TRP THR GLU GLY GLU SEQRES 48 A 815 PRO VAL ARG VAL LEU ALA TYR THR ASN ALA HIS GLN VAL SEQRES 49 A 815 GLU LEU PHE LEU ASN GLY LYS SER LEU GLY VAL ARG GLY SEQRES 50 A 815 TYR GLU ASN LYS LYS THR SER TRP GLY ALA PRO TYR LYS SEQRES 51 A 815 GLU THR LYS ASP GLY LYS THR TYR LEU GLU TRP ALA VAL SEQRES 52 A 815 PRO PHE LYS ALA GLY THR LEU GLU ALA VAL ALA MET ASP SEQRES 53 A 815 GLU ASN GLY LYS GLU ILE ALA ARG ASP GLN VAL THR THR SEQRES 54 A 815 ALA GLY ALA PRO ALA ALA VAL LYS LEU THR ALA ASP ARG SEQRES 55 A 815 LYS VAL ILE LYS ALA ASP GLY THR ASP LEU SER PHE ILE SEQRES 56 A 815 THR ALA GLU ILE VAL ASP SER LYS GLY ASN VAL VAL PRO SEQRES 57 A 815 ASN ALA ASP HIS LEU ILE GLN PHE HIS LEU SER GLY HIS SEQRES 58 A 815 GLY GLU LEU ALA GLY VAL ASP ASN GLY ASP ALA ALA SER SEQRES 59 A 815 VAL GLU ARG TYR LYS ASP ASN LYS ARG LYS ALA PHE SER SEQRES 60 A 815 GLY LYS ALA LEU ALA ILE VAL GLN SER ASN LYS LEU ASP SEQRES 61 A 815 GLY ASN ILE THR LEU HIS ALA SER ALA GLU GLY LEU SER SEQRES 62 A 815 SER GLY ASN VAL THR ILE PHE THR THR ALA SER ALA ASP SEQRES 63 A 815 GLN LEU GLU HIS HIS HIS HIS HIS HIS HET GOL A 901 6 HET GOL A 902 6 HET GOL A 903 6 HET GOL A 904 6 HET GOL A 905 6 HET GOL A 906 6 HET GOL A 907 6 HET SO4 A 908 5 HET SO4 A 909 5 HET SO4 A 910 5 HET SO4 A 911 5 HET SO4 A 912 5 HET SO4 A 913 5 HET CL A 914 1 HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL 7(C3 H8 O3) FORMUL 9 SO4 6(O4 S 2-) FORMUL 15 CL CL 1- FORMUL 16 HOH *645(H2 O) HELIX 1 AA1 LEU A 20 LYS A 25 5 6 HELIX 2 AA2 PRO A 75 GLU A 79 5 5 HELIX 3 AA3 ASP A 174 ALA A 181 1 8 HELIX 4 AA4 LEU A 305 GLY A 309 5 5 HELIX 5 AA5 ASN A 313 MET A 327 1 15 HELIX 6 AA6 SER A 340 GLY A 351 1 12 HELIX 7 AA7 TYR A 371 LYS A 391 1 21 HELIX 8 AA8 ILE A 405 THR A 409 5 5 HELIX 9 AA9 SER A 410 GLU A 426 1 17 HELIX 10 AB1 ASP A 451 VAL A 461 1 11 HELIX 11 AB2 SER A 469 TYR A 473 5 5 HELIX 12 AB3 VAL A 474 HIS A 480 1 7 HELIX 13 AB4 THR A 530 ASP A 540 1 11 HELIX 14 AB5 ASP A 584 LYS A 594 1 11 SHEET 1 AA1 4 ARG A 3 ASN A 5 0 SHEET 2 AA1 4 VAL A 153 THR A 158 -1 O LEU A 155 N ILE A 4 SHEET 3 AA1 4 ARG A 82 PHE A 87 -1 N ARG A 82 O THR A 158 SHEET 4 AA1 4 PHE A 113 ASP A 116 -1 O TYR A 115 N LEU A 85 SHEET 1 AA2 6 ARG A 34 LEU A 36 0 SHEET 2 AA2 6 TRP A 10 ARG A 14 -1 N TRP A 10 O LEU A 36 SHEET 3 AA2 6 GLY A 64 PHE A 72 -1 O TRP A 67 N GLN A 13 SHEET 4 AA2 6 ASN A 128 ASN A 136 -1 O VAL A 134 N GLY A 66 SHEET 5 AA2 6 SER A 94 LEU A 98 -1 N THR A 95 O LYS A 133 SHEET 6 AA2 6 GLU A 101 TYR A 106 -1 O LEU A 103 N THR A 96 SHEET 1 AA3 3 VAL A 161 THR A 171 0 SHEET 2 AA3 3 LYS A 183 ASN A 194 -1 O LYS A 191 N GLY A 167 SHEET 3 AA3 3 THR A 230 GLU A 241 -1 O ASP A 236 N ILE A 188 SHEET 1 AA4 3 GLU A 215 VAL A 220 0 SHEET 2 AA4 3 VAL A 200 TYR A 209 -1 N ILE A 208 O VAL A 216 SHEET 3 AA4 3 LYS A 224 ALA A 226 -1 O ALA A 226 N VAL A 200 SHEET 1 AA5 4 GLU A 215 VAL A 220 0 SHEET 2 AA5 4 VAL A 200 TYR A 209 -1 N ILE A 208 O VAL A 216 SHEET 3 AA5 4 TYR A 254 ILE A 262 -1 O LEU A 261 N LYS A 203 SHEET 4 AA5 4 GLU A 265 PHE A 274 -1 O VAL A 267 N VAL A 260 SHEET 1 AA6 3 PHE A 279 ASP A 282 0 SHEET 2 AA6 3 GLY A 286 LEU A 289 -1 O GLY A 286 N ASP A 282 SHEET 3 AA6 3 LYS A 292 PRO A 293 -1 O LYS A 292 N LEU A 289 SHEET 1 AA7 9 LEU A 296 SER A 300 0 SHEET 2 AA7 9 ALA A 331 GLY A 334 1 O ARG A 333 N VAL A 299 SHEET 3 AA7 9 LEU A 353 GLU A 357 1 O ILE A 355 N ILE A 332 SHEET 4 AA7 9 ILE A 396 ASN A 403 1 O SER A 400 N GLU A 356 SHEET 5 AA7 9 THR A 433 GLU A 437 1 O THR A 434 N ILE A 401 SHEET 6 AA7 9 VAL A 463 ASN A 467 1 O ASN A 467 N GLU A 437 SHEET 7 AA7 9 LEU A 485 SER A 491 1 O TYR A 486 N LEU A 466 SHEET 8 AA7 9 GLY A 546 TRP A 550 1 O TRP A 550 N THR A 490 SHEET 9 AA7 9 LEU A 296 SER A 300 1 N SER A 300 O ILE A 549 SHEET 1 AA8 2 ASN A 507 LEU A 508 0 SHEET 2 AA8 2 ASP A 523 TYR A 524 1 O TYR A 524 N ASN A 507 SHEET 1 AA9 3 VAL A 599 LEU A 602 0 SHEET 2 AA9 3 PRO A 612 THR A 619 -1 O LEU A 616 N LEU A 602 SHEET 3 AA9 3 LEU A 659 PRO A 664 -1 O TRP A 661 N VAL A 615 SHEET 1 AB1 4 LYS A 631 GLY A 637 0 SHEET 2 AB1 4 GLN A 623 LEU A 628 -1 N LEU A 626 O LEU A 633 SHEET 3 AB1 4 THR A 669 MET A 675 -1 O GLU A 671 N PHE A 627 SHEET 4 AB1 4 GLU A 681 THR A 688 -1 O ALA A 683 N ALA A 674 SHEET 1 AB2 2 GLU A 639 LYS A 642 0 SHEET 2 AB2 2 PRO A 648 GLU A 651 -1 O GLU A 651 N GLU A 639 SHEET 1 AB3 4 ALA A 695 ALA A 700 0 SHEET 2 AB3 4 LEU A 712 VAL A 720 -1 O GLU A 718 N LYS A 697 SHEET 3 AB3 4 LYS A 769 SER A 776 -1 O VAL A 774 N SER A 713 SHEET 4 AB3 4 GLY A 742 ASP A 748 -1 N GLY A 746 O ILE A 773 SHEET 1 AB4 5 VAL A 704 LYS A 706 0 SHEET 2 AB4 5 GLY A 795 THR A 802 1 O PHE A 800 N ILE A 705 SHEET 3 AB4 5 GLY A 781 SER A 788 -1 N ILE A 783 O ILE A 799 SHEET 4 AB4 5 LEU A 733 GLY A 740 -1 N SER A 739 O THR A 784 SHEET 5 AB4 5 LYS A 762 LYS A 764 -1 O ARG A 763 N ILE A 734 CISPEP 1 LEU A 38 PRO A 39 0 -3.12 CISPEP 2 TYR A 91 MET A 92 0 -6.14 CISPEP 3 GLN A 138 PRO A 139 0 2.43 CISPEP 4 THR A 335 HIS A 336 0 -2.35 CISPEP 5 TRP A 550 THR A 551 0 1.01 CISPEP 6 THR A 560 PRO A 561 0 4.39 CISPEP 7 TYR A 566 PRO A 567 0 10.83 CISPEP 8 LEU A 602 PRO A 603 0 2.17 SITE 1 AC1 10 ARG A 142 HIS A 336 ASN A 403 GLU A 404 SITE 2 AC1 10 GLU A 489 TRP A 550 GLU A 558 GOL A 905 SITE 3 AC1 10 HOH A1021 HOH A1233 SITE 1 AC2 6 HIS A 459 HIS A 480 PRO A 481 ASN A 482 SITE 2 AC2 6 TRP A 483 HOH A1227 SITE 1 AC3 7 LYS A 384 ASP A 388 ILE A 427 HOH A1013 SITE 2 AC3 7 HOH A1217 HOH A1279 HOH A1339 SITE 1 AC4 10 TYR A 91 PHE A 108 SER A 140 CYS A 361 SITE 2 AC4 10 ASP A 370 TYR A 371 HOH A1188 HOH A1189 SITE 3 AC4 10 HOH A1219 HOH A1474 SITE 1 AC5 6 GLU A 404 ASP A 438 ARG A 441 TRP A 527 SITE 2 AC5 6 GOL A 901 HOH A1021 SITE 1 AC6 2 ARG A 377 HIS A 381 SITE 1 AC7 4 LYS A 191 THR A 231 HIS A 233 HOH A1353 SITE 1 AC8 7 LEU A 541 LYS A 542 HIS A 543 TRP A 645 SITE 2 AC8 7 HOH A1010 HOH A1012 HOH A1141 SITE 1 AC9 4 LYS A 594 LYS A 595 GLU A 596 HOH A1175 SITE 1 AD1 5 PHE A 6 ASN A 9 LYS A 70 HOH A1367 SITE 2 AD1 5 HOH A1423 SITE 1 AD2 4 ARG A 422 TRP A 423 GLU A 426 HOH A1004 SITE 1 AD3 2 ARG A 21 HOH A1354 SITE 1 AD4 3 LYS A 25 PRO A 26 SER A 27 SITE 1 AD5 4 PHE A 274 GLY A 275 ASN A 392 PRO A 394 CRYST1 159.802 159.802 96.167 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006258 0.003613 0.000000 0.00000 SCALE2 0.000000 0.007226 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010399 0.00000