HEADER FLAVOPROTEIN 05-SEP-20 7CYX TITLE CRYSTAL STRCUTURE OF GLYCINE OXIDASE FROM BACILLUS CEREUS ATCC 14579 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCINE OXIDASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.5.3.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS CEREUS ATCC 14579; SOURCE 3 ORGANISM_TAXID: 226900; SOURCE 4 STRAIN: ATCC 14579; SOURCE 5 GENE: BC_0747; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET30A KEYWDS OXIDASE, FLAVOPROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.SEOK,K.-J.KIM REVDAT 3 29-NOV-23 7CYX 1 REMARK REVDAT 2 30-DEC-20 7CYX 1 JRNL REVDAT 1 14-OCT-20 7CYX 0 JRNL AUTH J.SEOK,Y.J.KIM,I.K.KIM,K.J.KIM JRNL TITL STRUCTURAL BASIS FOR STEREOSPECIFICITY TO D-AMINO ACID OF JRNL TITL 2 GLYCINE OXIDASE FROM BACILLUS CEREUS ATCC 14579. JRNL REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 533 824 2020 JRNL REFN ESSN 1090-2104 JRNL PMID 32993959 JRNL DOI 10.1016/J.BBRC.2020.09.093 REMARK 2 REMARK 2 RESOLUTION. 2.41 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0230 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.41 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.60 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.1 REMARK 3 NUMBER OF REFLECTIONS : 32704 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : 0.300 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1740 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.41 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.42 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1644 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 63.63 REMARK 3 BIN R VALUE (WORKING SET) : 0.3700 REMARK 3 BIN FREE R VALUE SET COUNT : 90 REMARK 3 BIN FREE R VALUE : 0.4850 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5666 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 106 REMARK 3 SOLVENT ATOMS : 32 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 61.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : 0.01000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.430 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.312 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.250 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.038 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.906 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5897 ; 0.009 ; 0.014 REMARK 3 BOND LENGTHS OTHERS (A): 5309 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7999 ; 1.416 ; 1.681 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12427 ; 0.853 ; 1.646 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 716 ; 7.091 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 296 ;36.591 ;22.095 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 997 ;19.379 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 36 ;20.383 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 770 ; 0.064 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6564 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1094 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7CYX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-SEP-20. REMARK 100 THE DEPOSITION ID IS D_1300018451. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAY-20 REMARK 200 TEMPERATURE (KELVIN) : 297 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 7A (6B, 6C1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36198 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.360 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 12.90 REMARK 200 R MERGE (I) : 0.10200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.41 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.60 REMARK 200 R MERGE FOR SHELL (I) : 1.35800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4YSH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TACSIMATE, HEPES, PEG 3350, PH 7.0, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 82.60600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 82.60600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 41.09000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 66.40500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 41.09000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 66.40500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 82.60600 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 41.09000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 66.40500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 82.60600 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 41.09000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 66.40500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 CYS A 2 REMARK 465 GLU A 3 REMARK 465 GLN A 53 REMARK 465 ALA A 54 REMARK 465 GLU A 55 REMARK 465 TRP A 56 REMARK 465 ASP A 57 REMARK 465 HIS A 372 REMARK 465 HIS A 373 REMARK 465 HIS A 374 REMARK 465 HIS A 375 REMARK 465 HIS A 376 REMARK 465 HIS A 377 REMARK 465 MET B 1 REMARK 465 CYS B 2 REMARK 465 GLU B 3 REMARK 465 GLN B 53 REMARK 465 ALA B 54 REMARK 465 GLU B 55 REMARK 465 LEU B 364 REMARK 465 LEU B 365 REMARK 465 SER B 366 REMARK 465 ARG B 367 REMARK 465 ARG B 368 REMARK 465 VAL B 369 REMARK 465 LEU B 370 REMARK 465 GLU B 371 REMARK 465 HIS B 372 REMARK 465 HIS B 373 REMARK 465 HIS B 374 REMARK 465 HIS B 375 REMARK 465 HIS B 376 REMARK 465 HIS B 377 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 175 NH1 ARG B 238 1.99 REMARK 500 OE1 GLN A 100 NE2 GLN A 248 2.07 REMARK 500 NH2 ARG A 131 O ILE A 141 2.15 REMARK 500 O LEU B 50 OD1 ASP B 150 2.17 REMARK 500 N GLY B 127 O ILE B 142 2.18 REMARK 500 OD1 ASP A 181 OH TYR A 218 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 36 -109.44 -119.00 REMARK 500 GLU A 41 -127.83 -126.66 REMARK 500 ASN A 60 178.52 177.78 REMARK 500 ARG A 250 -27.69 83.60 REMARK 500 ARG A 257 129.90 -31.36 REMARK 500 LEU A 292 78.14 -155.11 REMARK 500 CYS A 330 77.83 -163.68 REMARK 500 TYR A 334 -108.13 55.80 REMARK 500 LEU A 370 -169.84 -116.22 REMARK 500 GLN B 36 -92.79 -108.23 REMARK 500 GLU B 41 -129.43 -120.48 REMARK 500 GLU B 120 50.11 35.72 REMARK 500 ASP B 121 53.87 29.82 REMARK 500 ALA B 161 -70.99 -47.96 REMARK 500 TYR B 174 74.28 -101.08 REMARK 500 HIS B 220 121.36 -174.69 REMARK 500 GLN B 248 95.23 -163.29 REMARK 500 ARG B 250 -25.21 82.44 REMARK 500 ALA B 298 -172.84 -64.33 REMARK 500 CYS B 330 76.28 -167.21 REMARK 500 TYR B 334 -105.48 45.25 REMARK 500 ASP B 362 -71.01 -76.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 221 0.16 SIDE CHAIN REMARK 500 ARG A 308 0.08 SIDE CHAIN REMARK 500 ARG A 367 0.08 SIDE CHAIN REMARK 500 ARG A 368 0.11 SIDE CHAIN REMARK 500 ARG B 221 0.21 SIDE CHAIN REMARK 500 ARG B 236 0.18 SIDE CHAIN REMARK 500 ARG B 238 0.11 SIDE CHAIN REMARK 500 ARG B 260 0.09 SIDE CHAIN REMARK 500 ARG B 308 0.09 SIDE CHAIN REMARK 500 ARG B 335 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FAD A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FAD B 401 DBREF 7CYX A 1 369 UNP Q81HQ7 Q81HQ7_BACCR 1 369 DBREF 7CYX B 1 369 UNP Q81HQ7 Q81HQ7_BACCR 1 369 SEQADV 7CYX LEU A 370 UNP Q81HQ7 EXPRESSION TAG SEQADV 7CYX GLU A 371 UNP Q81HQ7 EXPRESSION TAG SEQADV 7CYX HIS A 372 UNP Q81HQ7 EXPRESSION TAG SEQADV 7CYX HIS A 373 UNP Q81HQ7 EXPRESSION TAG SEQADV 7CYX HIS A 374 UNP Q81HQ7 EXPRESSION TAG SEQADV 7CYX HIS A 375 UNP Q81HQ7 EXPRESSION TAG SEQADV 7CYX HIS A 376 UNP Q81HQ7 EXPRESSION TAG SEQADV 7CYX HIS A 377 UNP Q81HQ7 EXPRESSION TAG SEQADV 7CYX LEU B 370 UNP Q81HQ7 EXPRESSION TAG SEQADV 7CYX GLU B 371 UNP Q81HQ7 EXPRESSION TAG SEQADV 7CYX HIS B 372 UNP Q81HQ7 EXPRESSION TAG SEQADV 7CYX HIS B 373 UNP Q81HQ7 EXPRESSION TAG SEQADV 7CYX HIS B 374 UNP Q81HQ7 EXPRESSION TAG SEQADV 7CYX HIS B 375 UNP Q81HQ7 EXPRESSION TAG SEQADV 7CYX HIS B 376 UNP Q81HQ7 EXPRESSION TAG SEQADV 7CYX HIS B 377 UNP Q81HQ7 EXPRESSION TAG SEQRES 1 A 377 MET CYS GLU LYS TYR ASP VAL ALA ILE ILE GLY GLY GLY SEQRES 2 A 377 VAL ILE GLY SER SER VAL ALA HIS PHE LEU ALA GLU ARG SEQRES 3 A 377 GLY HIS LYS VAL ALA ILE VAL GLU LYS GLN SER ILE ALA SEQRES 4 A 377 SER GLU ALA SER LYS ALA ALA ALA GLY LEU LEU GLY VAL SEQRES 5 A 377 GLN ALA GLU TRP ASP ALA TYR ASN PRO LEU PHE GLU LEU SEQRES 6 A 377 ALA ARG GLU SER ARG ALA ILE PHE PRO GLN LEU ALA ALA SEQRES 7 A 377 VAL LEU ARG GLU LYS THR GLY VAL ASP ILE GLY TYR GLU SEQRES 8 A 377 GLU LYS GLY ILE TYR ARG ILE ALA GLN ASN GLU ASP GLU SEQRES 9 A 377 LYS GLU ARG ILE LEU HIS ILE MET ASP TRP GLN GLN LYS SEQRES 10 A 377 THR GLY GLU ASP SER TYR PHE LEU THR GLY ASP HIS VAL SEQRES 11 A 377 ARG GLU LYS GLU PRO TYR LEU SER GLU SER ILE ILE GLY SEQRES 12 A 377 ALA VAL TYR TYR PRO LYS ASP GLY HIS VAL ILE ALA PRO SEQRES 13 A 377 GLU LEU THR LYS ALA PHE ALA HIS SER ALA ALA ILE SER SEQRES 14 A 377 GLY ALA ASP ILE TYR GLU GLN THR GLU VAL PHE ASP ILE SEQRES 15 A 377 ARG ILE GLU ASN ASN LYS VAL THR GLY VAL ILE THR SER SEQRES 16 A 377 GLU GLY ILE VAL THR CYS GLU LYS VAL VAL ILE ALA GLY SEQRES 17 A 377 GLY SER TRP SER THR LYS LEU LEU SER TYR PHE HIS ARG SEQRES 18 A 377 ASP TRP GLY THR TYR PRO VAL LYS GLY GLU VAL VAL ALA SEQRES 19 A 377 VAL ARG SER ARG LYS GLN LEU LEU LYS ALA PRO ILE PHE SEQRES 20 A 377 GLN GLU ARG PHE TYR ILE THR PRO LYS ARG GLY GLY ARG SEQRES 21 A 377 TYR VAL ILE GLY ALA THR MET LYS PRO HIS THR PHE ASN SEQRES 22 A 377 LYS THR VAL GLN PRO GLU SER ILE THR SER ILE LEU GLU SEQRES 23 A 377 ARG ALA TYR THR ILE LEU PRO ALA LEU LYS GLU ALA GLU SEQRES 24 A 377 TRP GLU SER THR TRP ALA GLY LEU ARG PRO GLN SER ASN SEQRES 25 A 377 HIS GLU ALA PRO TYR MET GLY GLU HIS GLU GLU ILE LYS SEQRES 26 A 377 GLY LEU TYR ALA CYS THR GLY HIS TYR ARG ASN GLY ILE SEQRES 27 A 377 LEU LEU SER PRO ILE SER GLY GLN TYR MET ALA ASP LEU SEQRES 28 A 377 ILE GLU GLY LYS GLN GLU ASN HIS LEU LEU ASP SER LEU SEQRES 29 A 377 LEU SER ARG ARG VAL LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 377 MET CYS GLU LYS TYR ASP VAL ALA ILE ILE GLY GLY GLY SEQRES 2 B 377 VAL ILE GLY SER SER VAL ALA HIS PHE LEU ALA GLU ARG SEQRES 3 B 377 GLY HIS LYS VAL ALA ILE VAL GLU LYS GLN SER ILE ALA SEQRES 4 B 377 SER GLU ALA SER LYS ALA ALA ALA GLY LEU LEU GLY VAL SEQRES 5 B 377 GLN ALA GLU TRP ASP ALA TYR ASN PRO LEU PHE GLU LEU SEQRES 6 B 377 ALA ARG GLU SER ARG ALA ILE PHE PRO GLN LEU ALA ALA SEQRES 7 B 377 VAL LEU ARG GLU LYS THR GLY VAL ASP ILE GLY TYR GLU SEQRES 8 B 377 GLU LYS GLY ILE TYR ARG ILE ALA GLN ASN GLU ASP GLU SEQRES 9 B 377 LYS GLU ARG ILE LEU HIS ILE MET ASP TRP GLN GLN LYS SEQRES 10 B 377 THR GLY GLU ASP SER TYR PHE LEU THR GLY ASP HIS VAL SEQRES 11 B 377 ARG GLU LYS GLU PRO TYR LEU SER GLU SER ILE ILE GLY SEQRES 12 B 377 ALA VAL TYR TYR PRO LYS ASP GLY HIS VAL ILE ALA PRO SEQRES 13 B 377 GLU LEU THR LYS ALA PHE ALA HIS SER ALA ALA ILE SER SEQRES 14 B 377 GLY ALA ASP ILE TYR GLU GLN THR GLU VAL PHE ASP ILE SEQRES 15 B 377 ARG ILE GLU ASN ASN LYS VAL THR GLY VAL ILE THR SER SEQRES 16 B 377 GLU GLY ILE VAL THR CYS GLU LYS VAL VAL ILE ALA GLY SEQRES 17 B 377 GLY SER TRP SER THR LYS LEU LEU SER TYR PHE HIS ARG SEQRES 18 B 377 ASP TRP GLY THR TYR PRO VAL LYS GLY GLU VAL VAL ALA SEQRES 19 B 377 VAL ARG SER ARG LYS GLN LEU LEU LYS ALA PRO ILE PHE SEQRES 20 B 377 GLN GLU ARG PHE TYR ILE THR PRO LYS ARG GLY GLY ARG SEQRES 21 B 377 TYR VAL ILE GLY ALA THR MET LYS PRO HIS THR PHE ASN SEQRES 22 B 377 LYS THR VAL GLN PRO GLU SER ILE THR SER ILE LEU GLU SEQRES 23 B 377 ARG ALA TYR THR ILE LEU PRO ALA LEU LYS GLU ALA GLU SEQRES 24 B 377 TRP GLU SER THR TRP ALA GLY LEU ARG PRO GLN SER ASN SEQRES 25 B 377 HIS GLU ALA PRO TYR MET GLY GLU HIS GLU GLU ILE LYS SEQRES 26 B 377 GLY LEU TYR ALA CYS THR GLY HIS TYR ARG ASN GLY ILE SEQRES 27 B 377 LEU LEU SER PRO ILE SER GLY GLN TYR MET ALA ASP LEU SEQRES 28 B 377 ILE GLU GLY LYS GLN GLU ASN HIS LEU LEU ASP SER LEU SEQRES 29 B 377 LEU SER ARG ARG VAL LEU GLU HIS HIS HIS HIS HIS HIS HET FAD A 401 53 HET FAD B 401 53 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE FORMUL 3 FAD 2(C27 H33 N9 O15 P2) FORMUL 5 HOH *32(H2 O) HELIX 1 AA1 GLY A 13 ARG A 26 1 14 HELIX 2 AA2 GLU A 41 ALA A 46 1 6 HELIX 3 AA3 ASN A 60 ALA A 71 1 12 HELIX 4 AA4 ILE A 72 GLY A 85 1 14 HELIX 5 AA5 ASN A 101 LYS A 117 1 17 HELIX 6 AA6 GLY A 127 GLU A 134 1 8 HELIX 7 AA7 ILE A 154 SER A 169 1 16 HELIX 8 AA8 GLY A 208 TRP A 211 5 4 HELIX 9 AA9 SER A 212 SER A 217 1 6 HELIX 10 AB1 GLN A 277 LEU A 292 1 16 HELIX 11 AB2 PRO A 293 ALA A 298 5 6 HELIX 12 AB3 LEU A 340 GLU A 353 1 14 HELIX 13 AB4 HIS A 359 SER A 366 1 8 HELIX 14 AB5 GLY B 13 GLU B 25 1 13 HELIX 15 AB6 GLU B 41 ALA B 46 1 6 HELIX 16 AB7 ASN B 60 GLY B 85 1 26 HELIX 17 AB8 ASN B 101 TRP B 114 1 14 HELIX 18 AB9 GLY B 127 GLU B 134 1 8 HELIX 19 AC1 ILE B 154 SER B 169 1 16 HELIX 20 AC2 GLY B 208 TRP B 211 5 4 HELIX 21 AC3 SER B 212 SER B 217 1 6 HELIX 22 AC4 GLN B 277 LEU B 292 1 16 HELIX 23 AC5 PRO B 293 ALA B 298 5 6 HELIX 24 AC6 LEU B 340 GLU B 353 1 14 SHEET 1 AA1 6 ASP A 172 TYR A 174 0 SHEET 2 AA1 6 VAL A 30 VAL A 33 1 N ILE A 32 O TYR A 174 SHEET 3 AA1 6 TYR A 5 ILE A 10 1 N ILE A 9 O ALA A 31 SHEET 4 AA1 6 GLY A 197 ILE A 206 1 O VAL A 205 N ILE A 10 SHEET 5 AA1 6 VAL A 189 THR A 194 -1 N THR A 194 O GLY A 197 SHEET 6 AA1 6 VAL A 179 ILE A 184 -1 N ARG A 183 O THR A 190 SHEET 1 AA2 6 ASP A 172 TYR A 174 0 SHEET 2 AA2 6 VAL A 30 VAL A 33 1 N ILE A 32 O TYR A 174 SHEET 3 AA2 6 TYR A 5 ILE A 10 1 N ILE A 9 O ALA A 31 SHEET 4 AA2 6 GLY A 197 ILE A 206 1 O VAL A 205 N ILE A 10 SHEET 5 AA2 6 LEU A 327 THR A 331 1 O CYS A 330 N ILE A 206 SHEET 6 AA2 6 TYR A 317 GLU A 320 -1 N TYR A 317 O THR A 331 SHEET 1 AA3 2 LEU A 49 LEU A 50 0 SHEET 2 AA3 2 GLY A 151 HIS A 152 -1 O GLY A 151 N LEU A 50 SHEET 1 AA4 8 TYR A 123 THR A 126 0 SHEET 2 AA4 8 GLY A 143 TYR A 147 -1 O ALA A 144 N LEU A 125 SHEET 3 AA4 8 ILE A 95 ALA A 99 -1 N ARG A 97 O VAL A 145 SHEET 4 AA4 8 ILE A 246 GLN A 248 1 O PHE A 247 N TYR A 96 SHEET 5 AA4 8 PHE A 251 LYS A 256 -1 O ILE A 253 N ILE A 246 SHEET 6 AA4 8 ARG A 260 GLY A 264 -1 O GLY A 264 N TYR A 252 SHEET 7 AA4 8 THR A 225 ARG A 236 -1 N VAL A 235 O TYR A 261 SHEET 8 AA4 8 LYS A 268 PRO A 269 -1 O LYS A 268 N LYS A 229 SHEET 1 AA5 8 TYR A 123 THR A 126 0 SHEET 2 AA5 8 GLY A 143 TYR A 147 -1 O ALA A 144 N LEU A 125 SHEET 3 AA5 8 ILE A 95 ALA A 99 -1 N ARG A 97 O VAL A 145 SHEET 4 AA5 8 ILE A 246 GLN A 248 1 O PHE A 247 N TYR A 96 SHEET 5 AA5 8 PHE A 251 LYS A 256 -1 O ILE A 253 N ILE A 246 SHEET 6 AA5 8 ARG A 260 GLY A 264 -1 O GLY A 264 N TYR A 252 SHEET 7 AA5 8 THR A 225 ARG A 236 -1 N VAL A 235 O TYR A 261 SHEET 8 AA5 8 GLU A 299 SER A 311 -1 O GLU A 299 N ARG A 236 SHEET 1 AA6 6 ASP B 172 GLU B 175 0 SHEET 2 AA6 6 VAL B 30 GLU B 34 1 N ILE B 32 O TYR B 174 SHEET 3 AA6 6 VAL B 7 ILE B 10 1 N ILE B 9 O VAL B 33 SHEET 4 AA6 6 VAL B 204 ILE B 206 1 O VAL B 205 N ILE B 10 SHEET 5 AA6 6 LEU B 327 THR B 331 1 O TYR B 328 N VAL B 204 SHEET 6 AA6 6 TYR B 317 GLU B 320 -1 N TYR B 317 O THR B 331 SHEET 1 AA7 2 LEU B 49 LEU B 50 0 SHEET 2 AA7 2 GLY B 151 HIS B 152 -1 O GLY B 151 N LEU B 50 SHEET 1 AA8 8 TYR B 123 THR B 126 0 SHEET 2 AA8 8 GLY B 143 TYR B 147 -1 O TYR B 146 N TYR B 123 SHEET 3 AA8 8 ILE B 95 ALA B 99 -1 N ARG B 97 O VAL B 145 SHEET 4 AA8 8 ILE B 246 GLN B 248 1 O PHE B 247 N TYR B 96 SHEET 5 AA8 8 PHE B 251 LYS B 256 -1 O ILE B 253 N ILE B 246 SHEET 6 AA8 8 ARG B 260 GLY B 264 -1 O GLY B 264 N TYR B 252 SHEET 7 AA8 8 THR B 225 ARG B 236 -1 N VAL B 233 O ILE B 263 SHEET 8 AA8 8 LYS B 268 PRO B 269 -1 O LYS B 268 N LYS B 229 SHEET 1 AA9 8 TYR B 123 THR B 126 0 SHEET 2 AA9 8 GLY B 143 TYR B 147 -1 O TYR B 146 N TYR B 123 SHEET 3 AA9 8 ILE B 95 ALA B 99 -1 N ARG B 97 O VAL B 145 SHEET 4 AA9 8 ILE B 246 GLN B 248 1 O PHE B 247 N TYR B 96 SHEET 5 AA9 8 PHE B 251 LYS B 256 -1 O ILE B 253 N ILE B 246 SHEET 6 AA9 8 ARG B 260 GLY B 264 -1 O GLY B 264 N TYR B 252 SHEET 7 AA9 8 THR B 225 ARG B 236 -1 N VAL B 233 O ILE B 263 SHEET 8 AA9 8 GLU B 299 SER B 311 -1 O SER B 302 N ALA B 234 SHEET 1 AB1 3 VAL B 179 GLU B 185 0 SHEET 2 AB1 3 LYS B 188 THR B 194 -1 O ILE B 193 N ASP B 181 SHEET 3 AB1 3 ILE B 198 THR B 200 -1 O VAL B 199 N VAL B 192 CISPEP 1 GLY A 264 ALA A 265 0 2.92 CISPEP 2 GLY B 264 ALA B 265 0 5.64 SITE 1 AC1 33 GLY A 11 GLY A 13 VAL A 14 ILE A 15 SITE 2 AC1 33 VAL A 33 GLU A 34 LYS A 35 GLU A 41 SITE 3 AC1 33 ALA A 42 SER A 43 ALA A 46 ALA A 47 SITE 4 AC1 33 GLY A 48 LEU A 49 THR A 177 VAL A 179 SITE 5 AC1 33 ALA A 207 GLY A 208 GLY A 209 TRP A 211 SITE 6 AC1 33 VAL A 232 GLY A 306 ARG A 308 TYR A 334 SITE 7 AC1 33 ARG A 335 ASN A 336 GLY A 337 ILE A 338 SITE 8 AC1 33 LEU A 339 HOH A 504 HOH A 507 HOH A 511 SITE 9 AC1 33 HOH A 512 SITE 1 AC2 30 GLY B 11 GLY B 13 VAL B 14 ILE B 15 SITE 2 AC2 30 VAL B 33 GLU B 34 LYS B 35 GLU B 41 SITE 3 AC2 30 ALA B 42 SER B 43 ALA B 46 ALA B 47 SITE 4 AC2 30 GLY B 48 LEU B 49 THR B 177 VAL B 179 SITE 5 AC2 30 ALA B 207 GLY B 208 GLY B 209 TRP B 211 SITE 6 AC2 30 GLY B 306 ARG B 308 TYR B 334 ARG B 335 SITE 7 AC2 30 ASN B 336 GLY B 337 ILE B 338 LEU B 339 SITE 8 AC2 30 HOH B 503 HOH B 505 CRYST1 82.180 132.810 165.212 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012168 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007530 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006053 0.00000