HEADER HYDROLASE 12-SEP-20 7D0V TITLE CRYSTAL STRUCTURE OF TAIWAN COBRA 5'-NUCLEOTIDASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SNAKE VENOM 5'-NUCLEOTIDASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.1.3.5 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NAJA ATRA; SOURCE 3 ORGANISM_COMMON: CHINESE COBRA; SOURCE 4 ORGANISM_TAXID: 8656 KEYWDS 5'-NUCLEOTIDASE, COBRA VENOM, CD73, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.-H.TSAI,I.-J.LIN,C.-C.LIN,W.-G.WU REVDAT 2 29-NOV-23 7D0V 1 REMARK REVDAT 1 15-SEP-21 7D0V 0 JRNL AUTH M.-H.TSAI,I.-J.LIN,C.-C.LIN,W.-G.WU JRNL TITL CRYSTAL STRUCTURE OF TAIWAN COBRA 5'-NUCLEOTIDASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.18 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16-3549-000 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.18 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.67 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 52203 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2565 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 2.2530 - 2.1750 0.91 0 0 0.2239 0.2748 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 8430 REMARK 3 ANGLE : 0.858 11402 REMARK 3 CHIRALITY : 0.055 1286 REMARK 3 PLANARITY : 0.006 1478 REMARK 3 DIHEDRAL : 14.613 5063 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7D0V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-SEP-20. REMARK 100 THE DEPOSITION ID IS D_1300018492. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUL-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL15A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9998 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52203 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.175 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.11700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.9600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.18 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.26 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.58800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4H1S REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 3350, 0.2M MAGNESIUM CHLORIDE REMARK 280 HEXAHYDRATE, 0.1 M BIS-TRIS PH 6.7, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 34.06350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 41360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -162.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 552 REMARK 465 THR A 553 REMARK 465 LEU A 554 REMARK 465 PHE A 555 REMARK 465 GLY B 552 REMARK 465 THR B 553 REMARK 465 LEU B 554 REMARK 465 PHE B 555 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O4 NAG D 2 O5 BMA D 3 2.09 REMARK 500 C4 NAG E 2 C1 BMA E 3 2.15 REMARK 500 O HOH A 1014 O HOH A 1035 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 88 127.79 75.40 REMARK 500 SER A 141 104.60 -168.86 REMARK 500 ALA A 151 -82.60 -30.57 REMARK 500 SER A 152 -80.04 -11.01 REMARK 500 HIS A 243 -42.54 76.58 REMARK 500 SER A 255 -150.46 -130.65 REMARK 500 TYR A 281 -119.80 55.24 REMARK 500 ASN A 306 146.79 -174.29 REMARK 500 ALA A 352 -63.90 -90.94 REMARK 500 ASP A 378 -103.70 16.23 REMARK 500 PHE A 540 54.28 -154.17 REMARK 500 GLN B 88 132.99 75.12 REMARK 500 ASN B 122 33.63 -99.83 REMARK 500 SER B 141 103.63 -167.23 REMARK 500 HIS B 243 -38.86 75.18 REMARK 500 SER B 255 -149.77 -132.13 REMARK 500 TYR B 281 -117.86 55.02 REMARK 500 ASN B 306 146.26 -172.97 REMARK 500 ASP B 378 -69.34 62.47 REMARK 500 PHE B 540 53.77 -153.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1062 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH A1063 DISTANCE = 5.82 ANGSTROMS REMARK 525 HOH B 975 DISTANCE = 6.68 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 701 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 37 OD1 REMARK 620 2 HIS A 39 NE2 108.3 REMARK 620 3 ASP A 85 OD2 91.0 93.5 REMARK 620 4 HOH A 815 O 92.6 92.6 171.6 REMARK 620 5 HOH A 914 O 98.3 152.0 77.0 95.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 702 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 85 OD2 REMARK 620 2 ASN A 117 OD1 95.5 REMARK 620 3 HIS A 220 NE2 87.0 94.3 REMARK 620 4 HIS A 243 ND1 170.7 91.9 98.1 REMARK 620 5 HOH A 914 O 83.4 131.5 133.9 87.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 703 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 213 O REMARK 620 2 ASP A 237 OD1 138.9 REMARK 620 3 ASP A 237 OD2 88.9 50.7 REMARK 620 4 GLY A 298 O 92.1 83.9 92.7 REMARK 620 5 HOH A 871 O 84.2 99.8 88.5 176.1 REMARK 620 6 HOH A 905 O 80.5 139.7 169.3 86.9 91.2 REMARK 620 7 HOH A 921 O 152.3 68.5 117.1 96.0 86.8 73.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 602 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 37 OD1 REMARK 620 2 HIS B 39 NE2 123.4 REMARK 620 3 ASP B 85 OD2 89.4 93.3 REMARK 620 4 HOH B 723 O 101.3 95.1 159.7 REMARK 620 5 HOH B 828 O 104.5 131.4 78.7 81.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 603 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 85 OD2 REMARK 620 2 ASN B 117 OD1 96.1 REMARK 620 3 HIS B 220 NE2 86.8 95.1 REMARK 620 4 HIS B 243 ND1 168.6 92.8 99.5 REMARK 620 5 HOH B 828 O 80.3 127.9 136.0 88.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 604 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 213 O REMARK 620 2 ASP B 237 OD1 138.2 REMARK 620 3 ASP B 237 OD2 90.3 53.6 REMARK 620 4 GLY B 298 O 82.5 80.6 94.3 REMARK 620 5 HOH B 751 O 85.0 111.0 88.7 167.1 REMARK 620 6 HOH B 839 O 147.8 73.9 116.6 110.9 78.6 REMARK 620 7 HOH B 865 O 80.5 133.1 169.9 80.6 94.4 73.5 REMARK 620 N 1 2 3 4 5 6 DBREF 7D0V A 26 555 PDB 7D0V 7D0V 26 555 DBREF 7D0V B 26 555 PDB 7D0V 7D0V 26 555 SEQRES 1 A 530 GLY SER PHE LYS LEU THR ILE LEU HIS THR ASN ASP VAL SEQRES 2 A 530 HIS ALA ARG LEU GLU GLN THR SER ARG ASP SER GLY LYS SEQRES 3 A 530 CYS SER GLY GLU ASP CYS TYR GLY GLY VAL ALA ARG ARG SEQRES 4 A 530 ALA THR LYS ILE ARG GLN ILE ARG ALA SER HIS ARG ASN SEQRES 5 A 530 VAL LEU LEU LEU ASP ALA GLY ASP GLN TYR GLN GLY THR SEQRES 6 A 530 ILE TRP PHE ASN TYR PHE LYS GLY ARG GLU VAL VAL HIS SEQRES 7 A 530 PHE MET ASN SER LEU ARG TYR ASP ALA MET ALA LEU GLY SEQRES 8 A 530 ASN HIS GLU PHE ASP ASN GLY LEU ASN GLY LEU LEU ASP SEQRES 9 A 530 PRO LEU LEU LYS ASN VAL LYS PHE PRO ILE LEU SER ALA SEQRES 10 A 530 ASN ILE ARG PRO LYS GLY PRO ILE ALA SER LYS ILE SER SEQRES 11 A 530 GLY TYR ILE LEU PRO TYR LYS ILE ILE ASN VAL GLY SER SEQRES 12 A 530 GLU LYS VAL GLY ILE ILE GLY TYR THR THR LYS GLU THR SEQRES 13 A 530 PRO VAL LEU SER ASN PRO GLY PRO TYR LEU GLU PHE ARG SEQRES 14 A 530 ASP GLU VAL GLU GLU LEU GLN LYS HIS ALA ASP LYS LEU SEQRES 15 A 530 THR THR LEU GLY VAL ASN LYS ILE ILE ALA LEU GLY HIS SEQRES 16 A 530 SER GLY PHE MET GLU ASP CYS ARG ILE ALA GLN LYS VAL SEQRES 17 A 530 LYS GLY VAL ASP VAL VAL VAL GLY GLY HIS THR ASN THR SEQRES 18 A 530 PHE LEU TYR THR GLY SER PRO PRO SER ASN GLU VAL ALA SEQRES 19 A 530 ALA GLY ASN TYR PRO PHE MET GLN LEU SER ASP ASP GLY SEQRES 20 A 530 ARG GLN VAL PRO VAL VAL GLN ALA TYR ALA PHE GLY LYS SEQRES 21 A 530 TYR LEU GLY TYR LEU ASN VAL ILE PHE ASP ASP LYS GLY SEQRES 22 A 530 LYS VAL ILE LYS ALA SER GLY ASN PRO ILE LEU LEU ASN SEQRES 23 A 530 LYS SER ILE GLN GLU ASP PRO ALA VAL LYS ALA GLU ILE SEQRES 24 A 530 SER ARG MET LYS VAL GLN LEU GLN ASN TYR SER SER GLN SEQRES 25 A 530 GLU ILE GLY ARG THR ILE VAL TYR LEU ASN GLY THR THR SEQRES 26 A 530 HIS ALA CYS ARG PHE HIS GLU CYS ASN LEU GLY ASN LEU SEQRES 27 A 530 ILE CYS ASP ALA VAL VAL TYR ASN ASN LEU ARG HIS PRO SEQRES 28 A 530 ASP ASP ASN GLU TRP ASN HIS VAL SER MET CYS ILE VAL SEQRES 29 A 530 ASN GLY GLY GLY ILE ARG SER PRO ILE ASP GLU GLN ALA SEQRES 30 A 530 ASN ASN GLY ILE ILE THR LEU GLU GLU LEU THR ALA VAL SEQRES 31 A 530 LEU PRO PHE GLY GLY THR PHE ASP LEU LEU GLN ILE LYS SEQRES 32 A 530 GLY SER THR LEU ARG GLN ALA PHE GLU HIS SER VAL HIS SEQRES 33 A 530 ARG HIS GLY GLN GLY THR GLY GLU LEU LEU GLN VAL SER SEQRES 34 A 530 GLY ILE LYS VAL VAL TYR ASP LEU SER GLN LYS PRO GLY SEQRES 35 A 530 LYS ARG VAL VAL SER LEU ASN VAL LEU CYS THR GLU CYS SEQRES 36 A 530 ARG VAL PRO THR TYR VAL PRO LEU GLU MET GLU LYS THR SEQRES 37 A 530 TYR LYS VAL LEU LEU PRO SER PHE LEU ALA ALA GLY GLY SEQRES 38 A 530 ASP GLY TYR TYR MET LEU LYS GLY ASP SER SER ASN HIS SEQRES 39 A 530 SER SER GLY ASP LEU ASP ILE SER ILE VAL GLY ASN TYR SEQRES 40 A 530 ILE LYS ARG MET GLY LYS VAL PHE PRO ALA MET GLU GLY SEQRES 41 A 530 ARG MET VAL PHE SER ALA GLY THR LEU PHE SEQRES 1 B 530 GLY SER PHE LYS LEU THR ILE LEU HIS THR ASN ASP VAL SEQRES 2 B 530 HIS ALA ARG LEU GLU GLN THR SER ARG ASP SER GLY LYS SEQRES 3 B 530 CYS SER GLY GLU ASP CYS TYR GLY GLY VAL ALA ARG ARG SEQRES 4 B 530 ALA THR LYS ILE ARG GLN ILE ARG ALA SER HIS ARG ASN SEQRES 5 B 530 VAL LEU LEU LEU ASP ALA GLY ASP GLN TYR GLN GLY THR SEQRES 6 B 530 ILE TRP PHE ASN TYR PHE LYS GLY ARG GLU VAL VAL HIS SEQRES 7 B 530 PHE MET ASN SER LEU ARG TYR ASP ALA MET ALA LEU GLY SEQRES 8 B 530 ASN HIS GLU PHE ASP ASN GLY LEU ASN GLY LEU LEU ASP SEQRES 9 B 530 PRO LEU LEU LYS ASN VAL LYS PHE PRO ILE LEU SER ALA SEQRES 10 B 530 ASN ILE ARG PRO LYS GLY PRO ILE ALA SER LYS ILE SER SEQRES 11 B 530 GLY TYR ILE LEU PRO TYR LYS ILE ILE ASN VAL GLY SER SEQRES 12 B 530 GLU LYS VAL GLY ILE ILE GLY TYR THR THR LYS GLU THR SEQRES 13 B 530 PRO VAL LEU SER ASN PRO GLY PRO TYR LEU GLU PHE ARG SEQRES 14 B 530 ASP GLU VAL GLU GLU LEU GLN LYS HIS ALA ASP LYS LEU SEQRES 15 B 530 THR THR LEU GLY VAL ASN LYS ILE ILE ALA LEU GLY HIS SEQRES 16 B 530 SER GLY PHE MET GLU ASP CYS ARG ILE ALA GLN LYS VAL SEQRES 17 B 530 LYS GLY VAL ASP VAL VAL VAL GLY GLY HIS THR ASN THR SEQRES 18 B 530 PHE LEU TYR THR GLY SER PRO PRO SER ASN GLU VAL ALA SEQRES 19 B 530 ALA GLY ASN TYR PRO PHE MET GLN LEU SER ASP ASP GLY SEQRES 20 B 530 ARG GLN VAL PRO VAL VAL GLN ALA TYR ALA PHE GLY LYS SEQRES 21 B 530 TYR LEU GLY TYR LEU ASN VAL ILE PHE ASP ASP LYS GLY SEQRES 22 B 530 LYS VAL ILE LYS ALA SER GLY ASN PRO ILE LEU LEU ASN SEQRES 23 B 530 LYS SER ILE GLN GLU ASP PRO ALA VAL LYS ALA GLU ILE SEQRES 24 B 530 SER ARG MET LYS VAL GLN LEU GLN ASN TYR SER SER GLN SEQRES 25 B 530 GLU ILE GLY ARG THR ILE VAL TYR LEU ASN GLY THR THR SEQRES 26 B 530 HIS ALA CYS ARG PHE HIS GLU CYS ASN LEU GLY ASN LEU SEQRES 27 B 530 ILE CYS ASP ALA VAL VAL TYR ASN ASN LEU ARG HIS PRO SEQRES 28 B 530 ASP ASP ASN GLU TRP ASN HIS VAL SER MET CYS ILE VAL SEQRES 29 B 530 ASN GLY GLY GLY ILE ARG SER PRO ILE ASP GLU GLN ALA SEQRES 30 B 530 ASN ASN GLY ILE ILE THR LEU GLU GLU LEU THR ALA VAL SEQRES 31 B 530 LEU PRO PHE GLY GLY THR PHE ASP LEU LEU GLN ILE LYS SEQRES 32 B 530 GLY SER THR LEU ARG GLN ALA PHE GLU HIS SER VAL HIS SEQRES 33 B 530 ARG HIS GLY GLN GLY THR GLY GLU LEU LEU GLN VAL SER SEQRES 34 B 530 GLY ILE LYS VAL VAL TYR ASP LEU SER GLN LYS PRO GLY SEQRES 35 B 530 LYS ARG VAL VAL SER LEU ASN VAL LEU CYS THR GLU CYS SEQRES 36 B 530 ARG VAL PRO THR TYR VAL PRO LEU GLU MET GLU LYS THR SEQRES 37 B 530 TYR LYS VAL LEU LEU PRO SER PHE LEU ALA ALA GLY GLY SEQRES 38 B 530 ASP GLY TYR TYR MET LEU LYS GLY ASP SER SER ASN HIS SEQRES 39 B 530 SER SER GLY ASP LEU ASP ILE SER ILE VAL GLY ASN TYR SEQRES 40 B 530 ILE LYS ARG MET GLY LYS VAL PHE PRO ALA MET GLU GLY SEQRES 41 B 530 ARG MET VAL PHE SER ALA GLY THR LEU PHE HET NAG C 1 14 HET FUC C 2 10 HET NAG D 1 14 HET NAG D 2 14 HET BMA D 3 11 HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET ZN A 701 1 HET ZN A 702 1 HET CA A 703 1 HET NAG B 601 14 HET ZN B 602 1 HET ZN B 603 1 HET CA B 604 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM ZN ZINC ION HETNAM CA CALCIUM ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 3 NAG 6(C8 H15 N O6) FORMUL 3 FUC C6 H12 O5 FORMUL 4 BMA 2(C6 H12 O6) FORMUL 6 ZN 4(ZN 2+) FORMUL 8 CA 2(CA 2+) FORMUL 13 HOH *538(H2 O) HELIX 1 AA1 GLY A 60 HIS A 75 1 16 HELIX 2 AA2 THR A 90 LYS A 97 1 8 HELIX 3 AA3 GLY A 98 LEU A 108 1 11 HELIX 4 AA4 GLY A 116 ASP A 121 5 6 HELIX 5 AA5 ASN A 122 ASP A 129 1 8 HELIX 6 AA6 PRO A 130 VAL A 135 1 6 HELIX 7 AA7 ILE A 150 ILE A 158 1 9 HELIX 8 AA8 GLU A 180 SER A 185 1 6 HELIX 9 AA9 ASP A 195 LEU A 210 1 16 HELIX 10 AB1 GLY A 222 VAL A 233 1 12 HELIX 11 AB2 ASP A 317 SER A 336 1 20 HELIX 12 AB3 THR A 349 ARG A 354 1 6 HELIX 13 AB4 CYS A 358 ASN A 372 1 15 HELIX 14 AB5 GLY A 392 ILE A 394 5 3 HELIX 15 AB6 LEU A 409 LEU A 416 1 8 HELIX 16 AB7 GLY A 429 HIS A 441 1 13 HELIX 17 AB8 SER A 500 ALA A 504 1 5 HELIX 18 AB9 GLY A 505 LYS A 513 5 9 HELIX 19 AC1 ASP A 525 GLY A 537 1 13 HELIX 20 AC2 GLY B 60 HIS B 75 1 16 HELIX 21 AC3 THR B 90 LYS B 97 1 8 HELIX 22 AC4 GLY B 98 ARG B 109 1 12 HELIX 23 AC5 GLY B 116 ASP B 121 5 6 HELIX 24 AC6 ASN B 122 ASP B 129 1 8 HELIX 25 AC7 PRO B 130 VAL B 135 1 6 HELIX 26 AC8 GLY B 148 GLY B 156 1 9 HELIX 27 AC9 GLU B 180 SER B 185 1 6 HELIX 28 AD1 ASP B 195 LEU B 210 1 16 HELIX 29 AD2 GLY B 222 VAL B 233 1 12 HELIX 30 AD3 ASP B 317 GLN B 337 1 21 HELIX 31 AD4 THR B 349 ARG B 354 1 6 HELIX 32 AD5 CYS B 358 ASN B 372 1 15 HELIX 33 AD6 GLY B 392 ILE B 394 5 3 HELIX 34 AD7 THR B 408 LEU B 416 1 9 HELIX 35 AD8 GLY B 429 HIS B 441 1 13 HELIX 36 AD9 SER B 500 ALA B 504 1 5 HELIX 37 AE1 GLY B 505 LYS B 513 5 9 HELIX 38 AE2 ASP B 525 GLY B 537 1 13 SHEET 1 AA1 6 ILE A 139 LEU A 140 0 SHEET 2 AA1 6 ALA A 112 ALA A 114 1 N MET A 113 O LEU A 140 SHEET 3 AA1 6 VAL A 78 ASP A 82 1 N ASP A 82 O ALA A 114 SHEET 4 AA1 6 SER A 27 THR A 35 1 N LEU A 33 O LEU A 79 SHEET 5 AA1 6 TYR A 286 ASP A 295 -1 O LEU A 290 N ILE A 32 SHEET 6 AA1 6 VAL A 300 GLY A 305 -1 O LYS A 302 N ILE A 293 SHEET 1 AA2 6 ILE A 139 LEU A 140 0 SHEET 2 AA2 6 ALA A 112 ALA A 114 1 N MET A 113 O LEU A 140 SHEET 3 AA2 6 VAL A 78 ASP A 82 1 N ASP A 82 O ALA A 114 SHEET 4 AA2 6 SER A 27 THR A 35 1 N LEU A 33 O LEU A 79 SHEET 5 AA2 6 TYR A 286 ASP A 295 -1 O LEU A 290 N ILE A 32 SHEET 6 AA2 6 ILE A 308 LEU A 309 -1 O ILE A 308 N LEU A 287 SHEET 1 AA3 2 ILE A 144 PRO A 146 0 SHEET 2 AA3 2 LEU A 191 PHE A 193 -1 O GLU A 192 N ARG A 145 SHEET 1 AA4 6 TYR A 161 VAL A 166 0 SHEET 2 AA4 6 GLU A 169 THR A 177 -1 O VAL A 171 N ILE A 164 SHEET 3 AA4 6 ILE A 215 HIS A 220 1 O ILE A 216 N GLY A 172 SHEET 4 AA4 6 VAL A 238 VAL A 240 1 O VAL A 238 N ALA A 217 SHEET 5 AA4 6 GLN A 274 VAL A 278 1 O VAL A 278 N VAL A 239 SHEET 6 AA4 6 PHE A 265 LEU A 268 -1 N GLN A 267 O VAL A 275 SHEET 1 AA5 3 ILE A 406 THR A 408 0 SHEET 2 AA5 3 GLU A 338 THR A 342 -1 N GLY A 340 O ILE A 407 SHEET 3 AA5 3 LYS A 538 VAL A 539 1 O VAL A 539 N ARG A 341 SHEET 1 AA6 2 CYS A 387 ASN A 390 0 SHEET 2 AA6 2 LEU A 451 SER A 454 -1 O GLN A 452 N VAL A 389 SHEET 1 AA7 3 THR A 493 PRO A 499 0 SHEET 2 AA7 3 THR A 421 LYS A 428 -1 N ILE A 427 O TYR A 494 SHEET 3 AA7 3 HIS A 519 LEU A 524 -1 O SER A 520 N LEU A 424 SHEET 1 AA8 4 TYR A 485 PRO A 487 0 SHEET 2 AA8 4 VAL A 470 LEU A 476 -1 N VAL A 475 O VAL A 486 SHEET 3 AA8 4 ILE A 456 TYR A 460 -1 N LYS A 457 O ASN A 474 SHEET 4 AA8 4 MET A 547 PHE A 549 1 O VAL A 548 N TYR A 460 SHEET 1 AA9 6 ILE B 139 LEU B 140 0 SHEET 2 AA9 6 ALA B 112 ALA B 114 1 N MET B 113 O LEU B 140 SHEET 3 AA9 6 VAL B 78 ASP B 82 1 N ASP B 82 O ALA B 114 SHEET 4 AA9 6 PHE B 28 THR B 35 1 N LEU B 33 O LEU B 79 SHEET 5 AA9 6 TYR B 286 PHE B 294 -1 O VAL B 292 N LEU B 30 SHEET 6 AA9 6 VAL B 300 GLY B 305 -1 O SER B 304 N ASN B 291 SHEET 1 AB1 6 ILE B 139 LEU B 140 0 SHEET 2 AB1 6 ALA B 112 ALA B 114 1 N MET B 113 O LEU B 140 SHEET 3 AB1 6 VAL B 78 ASP B 82 1 N ASP B 82 O ALA B 114 SHEET 4 AB1 6 PHE B 28 THR B 35 1 N LEU B 33 O LEU B 79 SHEET 5 AB1 6 TYR B 286 PHE B 294 -1 O VAL B 292 N LEU B 30 SHEET 6 AB1 6 ILE B 308 LEU B 309 -1 O ILE B 308 N LEU B 287 SHEET 1 AB2 2 ILE B 144 PRO B 146 0 SHEET 2 AB2 2 LEU B 191 PHE B 193 -1 O GLU B 192 N ARG B 145 SHEET 1 AB3 6 TYR B 161 VAL B 166 0 SHEET 2 AB3 6 GLU B 169 THR B 177 -1 O GLU B 169 N VAL B 166 SHEET 3 AB3 6 ILE B 215 HIS B 220 1 O ILE B 216 N GLY B 172 SHEET 4 AB3 6 VAL B 238 VAL B 240 1 O VAL B 238 N ALA B 217 SHEET 5 AB3 6 GLN B 274 VAL B 278 1 O PRO B 276 N VAL B 239 SHEET 6 AB3 6 PHE B 265 LEU B 268 -1 N GLN B 267 O VAL B 275 SHEET 1 AB4 3 ILE B 406 ILE B 407 0 SHEET 2 AB4 3 GLY B 340 THR B 342 -1 N GLY B 340 O ILE B 407 SHEET 3 AB4 3 LYS B 538 VAL B 539 1 O VAL B 539 N ARG B 341 SHEET 1 AB5 2 CYS B 387 ASN B 390 0 SHEET 2 AB5 2 LEU B 451 SER B 454 -1 O GLN B 452 N VAL B 389 SHEET 1 AB6 3 THR B 493 PRO B 499 0 SHEET 2 AB6 3 THR B 421 LYS B 428 -1 N ILE B 427 O TYR B 494 SHEET 3 AB6 3 HIS B 519 LEU B 524 -1 O SER B 520 N LEU B 424 SHEET 1 AB7 4 TYR B 485 PRO B 487 0 SHEET 2 AB7 4 VAL B 470 LEU B 476 -1 N VAL B 475 O VAL B 486 SHEET 3 AB7 4 ILE B 456 TYR B 460 -1 N LYS B 457 O ASN B 474 SHEET 4 AB7 4 MET B 547 PHE B 549 1 O VAL B 548 N TYR B 460 SSBOND 1 CYS A 52 CYS A 57 1555 1555 2.01 SSBOND 2 CYS A 353 CYS A 358 1555 1555 2.07 SSBOND 3 CYS A 365 CYS A 387 1555 1555 2.08 SSBOND 4 CYS A 477 CYS A 480 1555 1555 2.07 SSBOND 5 CYS B 52 CYS B 57 1555 1555 2.01 SSBOND 6 CYS B 353 CYS B 358 1555 1555 2.10 SSBOND 7 CYS B 365 CYS B 387 1555 1555 2.08 SSBOND 8 CYS B 477 CYS B 480 1555 1555 2.07 LINK ND2 ASN A 333 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN A 347 C1 NAG D 1 1555 1555 1.43 LINK ND2 ASN B 333 C1 NAG B 601 1555 1555 1.46 LINK ND2 ASN B 347 C1 NAG E 1 1555 1555 1.44 LINK O6 NAG C 1 C1 FUC C 2 1555 1555 1.38 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.37 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.37 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.37 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.38 LINK OD1 ASP A 37 ZN ZN A 701 1555 1555 2.13 LINK NE2 HIS A 39 ZN ZN A 701 1555 1555 2.12 LINK OD2 ASP A 85 ZN ZN A 701 1555 1555 2.27 LINK OD2 ASP A 85 ZN ZN A 702 1555 1555 2.20 LINK OD1 ASN A 117 ZN ZN A 702 1555 1555 2.02 LINK O ASN A 213 CA CA A 703 1555 1555 2.25 LINK NE2 HIS A 220 ZN ZN A 702 1555 1555 1.93 LINK OD1 ASP A 237 CA CA A 703 1555 1555 2.57 LINK OD2 ASP A 237 CA CA A 703 1555 1555 2.57 LINK ND1 HIS A 243 ZN ZN A 702 1555 1555 2.16 LINK O GLY A 298 CA CA A 703 1555 1555 2.38 LINK ZN ZN A 701 O HOH A 815 1555 1555 2.26 LINK ZN ZN A 701 O HOH A 914 1555 1555 2.22 LINK ZN ZN A 702 O HOH A 914 1555 1555 2.00 LINK CA CA A 703 O HOH A 871 1555 1555 2.35 LINK CA CA A 703 O HOH A 905 1555 1555 2.53 LINK CA CA A 703 O HOH A 921 1555 1555 2.43 LINK OD1 ASP B 37 ZN ZN B 602 1555 1555 2.06 LINK NE2 HIS B 39 ZN ZN B 602 1555 1555 2.14 LINK OD2 ASP B 85 ZN ZN B 602 1555 1555 2.24 LINK OD2 ASP B 85 ZN ZN B 603 1555 1555 2.16 LINK OD1 ASN B 117 ZN ZN B 603 1555 1555 1.99 LINK O ASN B 213 CA CA B 604 1555 1555 2.33 LINK NE2 HIS B 220 ZN ZN B 603 1555 1555 1.84 LINK OD1 ASP B 237 CA CA B 604 1555 1555 2.40 LINK OD2 ASP B 237 CA CA B 604 1555 1555 2.53 LINK ND1 HIS B 243 ZN ZN B 603 1555 1555 2.18 LINK O GLY B 298 CA CA B 604 1555 1555 2.40 LINK ZN ZN B 602 O HOH B 723 1555 1555 2.27 LINK ZN ZN B 602 O HOH B 828 1555 1555 2.21 LINK ZN ZN B 603 O HOH B 828 1555 1555 2.22 LINK CA CA B 604 O HOH B 751 1555 1555 2.29 LINK CA CA B 604 O HOH B 839 1555 1555 2.33 LINK CA CA B 604 O HOH B 865 1555 1555 2.44 CISPEP 1 ASP A 129 PRO A 130 0 8.96 CISPEP 2 TYR A 263 PRO A 264 0 -4.58 CISPEP 3 ASP B 129 PRO B 130 0 10.88 CISPEP 4 TYR B 263 PRO B 264 0 -3.65 CRYST1 53.327 68.127 140.214 90.00 95.17 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018752 0.000000 0.001697 0.00000 SCALE2 0.000000 0.014678 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007161 0.00000