HEADER CIRCADIAN CLOCK PROTEIN 14-SEP-20 7D1C TITLE CRYSTAL STRUCTURE OF MOUSE CRYPTOCHROME 1 IN COMPLEX WITH COMPOUND TITLE 2 TH303 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CRYPTOCHROME-1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: CRY1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS CRYPTOCHROME, CRY, CRY1, CLOCK, CIRCADIAN CLOCK PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.A.MILLER,T.HIROTA REVDAT 3 29-NOV-23 7D1C 1 REMARK REVDAT 2 17-FEB-21 7D1C 1 JRNL REVDAT 1 27-JAN-21 7D1C 0 JRNL AUTH D.KOLARSKI,S.MILLER,T.OSHIMA,Y.NAGAI,Y.AOKI,P.KOBAURI, JRNL AUTH 2 A.SRIVASTAVA,A.SUGIYAMA,K.AMAIKE,A.SATO,F.TAMA,W.SZYMANSKI, JRNL AUTH 3 B.L.FERINGA,K.ITAMI,T.HIROTA JRNL TITL PHOTOPHARMACOLOGICAL MANIPULATION OF MAMMALIAN CRY1 FOR JRNL TITL 2 REGULATION OF THE CIRCADIAN CLOCK. JRNL REF J.AM.CHEM.SOC. V. 143 2078 2021 JRNL REFN ESSN 1520-5126 JRNL PMID 33464888 JRNL DOI 10.1021/JACS.0C12280 REMARK 2 REMARK 2 RESOLUTION. 1.91 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.91 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.70 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 37433 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 1905 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.7000 - 4.5900 0.99 2784 117 0.1798 0.2033 REMARK 3 2 4.5900 - 3.6400 1.00 2641 136 0.1569 0.1854 REMARK 3 3 3.6400 - 3.1800 1.00 2607 147 0.1865 0.2081 REMARK 3 4 3.1800 - 2.8900 0.99 2569 146 0.1980 0.2380 REMARK 3 5 2.8900 - 2.6900 0.99 2527 156 0.2004 0.2156 REMARK 3 6 2.6800 - 2.5300 0.99 2524 136 0.1938 0.2080 REMARK 3 7 2.5300 - 2.4000 0.99 2519 156 0.1915 0.2385 REMARK 3 8 2.4000 - 2.3000 0.98 2536 126 0.1933 0.1952 REMARK 3 9 2.3000 - 2.2100 0.99 2527 138 0.2007 0.2339 REMARK 3 10 2.2100 - 2.1300 0.98 2493 140 0.1950 0.2399 REMARK 3 11 2.1300 - 2.0600 0.98 2467 134 0.1985 0.2379 REMARK 3 12 2.0600 - 2.0100 0.98 2515 134 0.2081 0.2663 REMARK 3 13 2.0100 - 1.9500 0.97 2476 120 0.2156 0.2317 REMARK 3 14 1.9500 - 1.9100 0.92 2343 119 0.2354 0.2966 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.182 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.616 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.05 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 4007 REMARK 3 ANGLE : 0.593 5462 REMARK 3 CHIRALITY : 0.041 578 REMARK 3 PLANARITY : 0.004 704 REMARK 3 DIHEDRAL : 24.623 546 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 229 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.0925 6.1720 -11.9280 REMARK 3 T TENSOR REMARK 3 T11: 0.1578 T22: 0.1649 REMARK 3 T33: 0.1440 T12: -0.0301 REMARK 3 T13: -0.0150 T23: 0.0109 REMARK 3 L TENSOR REMARK 3 L11: 0.8934 L22: 1.1374 REMARK 3 L33: 1.5646 L12: -0.2551 REMARK 3 L13: -0.0256 L23: -0.1256 REMARK 3 S TENSOR REMARK 3 S11: 0.0237 S12: -0.1225 S13: -0.0083 REMARK 3 S21: 0.1331 S22: 0.0046 S23: -0.0308 REMARK 3 S31: 0.0061 S32: -0.1299 S33: -0.0191 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 230 THROUGH 277 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4790 21.6902 -21.7902 REMARK 3 T TENSOR REMARK 3 T11: 0.2208 T22: 0.2202 REMARK 3 T33: 0.2347 T12: -0.0697 REMARK 3 T13: 0.0168 T23: 0.0070 REMARK 3 L TENSOR REMARK 3 L11: 0.2471 L22: 0.7012 REMARK 3 L33: 1.0368 L12: 0.2042 REMARK 3 L13: -0.0687 L23: -0.3065 REMARK 3 S TENSOR REMARK 3 S11: 0.1450 S12: -0.0817 S13: 0.1865 REMARK 3 S21: 0.1815 S22: -0.1053 S23: 0.0079 REMARK 3 S31: -0.3035 S32: 0.2126 S33: -0.0449 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 278 THROUGH 310 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.2094 23.2505 -22.4350 REMARK 3 T TENSOR REMARK 3 T11: 0.2938 T22: 0.1600 REMARK 3 T33: 0.2152 T12: 0.0220 REMARK 3 T13: 0.0093 T23: 0.0124 REMARK 3 L TENSOR REMARK 3 L11: 1.7070 L22: 0.4653 REMARK 3 L33: 1.5077 L12: 0.2976 REMARK 3 L13: 0.7505 L23: 0.3246 REMARK 3 S TENSOR REMARK 3 S11: -0.1537 S12: -0.1060 S13: 0.2000 REMARK 3 S21: 0.0230 S22: 0.1702 S23: 0.0847 REMARK 3 S31: -0.5227 S32: -0.1701 S33: 0.0012 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 311 THROUGH 400 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.8657 13.4750 -38.5232 REMARK 3 T TENSOR REMARK 3 T11: 0.1055 T22: 0.1088 REMARK 3 T33: 0.1522 T12: 0.0174 REMARK 3 T13: -0.0224 T23: -0.0240 REMARK 3 L TENSOR REMARK 3 L11: 1.5041 L22: 0.6335 REMARK 3 L33: 0.6362 L12: -0.5902 REMARK 3 L13: 0.0981 L23: -0.3683 REMARK 3 S TENSOR REMARK 3 S11: 0.1443 S12: 0.0067 S13: -0.2453 REMARK 3 S21: -0.0893 S22: -0.0547 S23: 0.1717 REMARK 3 S31: 0.0130 S32: -0.0639 S33: -0.1082 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 401 THROUGH 440 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.5097 18.7626 -45.2363 REMARK 3 T TENSOR REMARK 3 T11: 0.2208 T22: 0.1632 REMARK 3 T33: 0.1674 T12: 0.0544 REMARK 3 T13: 0.0103 T23: -0.0232 REMARK 3 L TENSOR REMARK 3 L11: 1.6486 L22: 0.2819 REMARK 3 L33: 1.1744 L12: 0.3929 REMARK 3 L13: -0.8173 L23: -0.4765 REMARK 3 S TENSOR REMARK 3 S11: 0.2246 S12: 0.1687 S13: 0.3743 REMARK 3 S21: -0.1793 S22: -0.1220 S23: -0.1825 REMARK 3 S31: -0.1735 S32: 0.0178 S33: -0.1402 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 441 THROUGH 496 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.8648 17.5911 -53.2171 REMARK 3 T TENSOR REMARK 3 T11: 0.3096 T22: 0.2966 REMARK 3 T33: 0.1488 T12: 0.1567 REMARK 3 T13: -0.0240 T23: -0.0290 REMARK 3 L TENSOR REMARK 3 L11: 1.1982 L22: 0.4244 REMARK 3 L33: 0.6702 L12: -0.1784 REMARK 3 L13: -0.7778 L23: 0.1325 REMARK 3 S TENSOR REMARK 3 S11: 0.3645 S12: 0.4513 S13: 0.0650 REMARK 3 S21: -0.3750 S22: -0.1938 S23: 0.0446 REMARK 3 S31: -0.0749 S32: -0.1456 S33: -0.0130 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7D1C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-SEP-20. REMARK 100 THE DEPOSITION ID IS D_1300018579. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-JUN-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 0.6.467 REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.22 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37588 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 67.780 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : 0.11700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 0.40000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: 6KX4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.25 M NH4CL, 23% PEG W/V 3350, 3% V/V REMARK 280 ETHYLENE GLYCOL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.53900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.56950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.57400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 66.56950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.53900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.57400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 THR A 0 REMARK 465 MET A 1 REMARK 465 VAL A 231 REMARK 465 ALA A 232 REMARK 465 ASN A 233 REMARK 465 PHE A 234 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 68 CG CD CE NZ REMARK 470 ARG A 77 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 89 CG CD CE NZ REMARK 470 LYS A 115 CG CD CE NZ REMARK 470 ARG A 127 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 137 CG CD CE NZ REMARK 470 GLU A 140 CG CD OE1 OE2 REMARK 470 GLN A 145 CG CD OE1 NE2 REMARK 470 LEU A 148 CG CD1 CD2 REMARK 470 ARG A 152 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 161 CG CD OE1 OE2 REMARK 470 GLU A 164 CG CD OE1 OE2 REMARK 470 MET A 165 CG SD CE REMARK 470 ASP A 168 CG OD1 OD2 REMARK 470 ASP A 173 CG OD1 OD2 REMARK 470 LYS A 177 CG CD CE NZ REMARK 470 ASP A 184 CG OD1 OD2 REMARK 470 LYS A 189 CG CD CE NZ REMARK 470 GLU A 222 CG CD OE1 OE2 REMARK 470 TRP A 230 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 230 CZ3 CH2 REMARK 470 GLU A 235 CG CD OE1 OE2 REMARK 470 ARG A 236 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 274 CG CD CE NZ REMARK 470 SER A 281 OG REMARK 470 LEU A 284 CG CD1 CD2 REMARK 470 GLN A 407 CG CD OE1 NE2 REMARK 470 GLN A 408 CG CD OE1 NE2 REMARK 470 PHE A 410 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 452 CG CD OE1 OE2 REMARK 470 LYS A 456 CG CD CE NZ REMARK 470 LYS A 459 CG CD CE NZ REMARK 470 ARG A 495 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 10 -76.23 -135.11 REMARK 500 SER A 129 5.48 -159.41 REMARK 500 MET A 309 -62.13 -92.06 REMARK 500 THR A 366 -99.07 -101.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 862 DISTANCE = 6.43 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOF A 501 DBREF 7D1C A 1 496 UNP P97784 CRY1_MOUSE 1 496 SEQADV 7D1C GLY A -1 UNP P97784 EXPRESSION TAG SEQADV 7D1C THR A 0 UNP P97784 EXPRESSION TAG SEQRES 1 A 498 GLY THR MET GLY VAL ASN ALA VAL HIS TRP PHE ARG LYS SEQRES 2 A 498 GLY LEU ARG LEU HIS ASP ASN PRO ALA LEU LYS GLU CYS SEQRES 3 A 498 ILE GLN GLY ALA ASP THR ILE ARG CYS VAL TYR ILE LEU SEQRES 4 A 498 ASP PRO TRP PHE ALA GLY SER SER ASN VAL GLY ILE ASN SEQRES 5 A 498 ARG TRP ARG PHE LEU LEU GLN CYS LEU GLU ASP LEU ASP SEQRES 6 A 498 ALA ASN LEU ARG LYS LEU ASN SER ARG LEU PHE VAL ILE SEQRES 7 A 498 ARG GLY GLN PRO ALA ASP VAL PHE PRO ARG LEU PHE LYS SEQRES 8 A 498 GLU TRP ASN ILE THR LYS LEU SER ILE GLU TYR ASP SER SEQRES 9 A 498 GLU PRO PHE GLY LYS GLU ARG ASP ALA ALA ILE LYS LYS SEQRES 10 A 498 LEU ALA THR GLU ALA GLY VAL GLU VAL ILE VAL ARG ILE SEQRES 11 A 498 SER HIS THR LEU TYR ASP LEU ASP LYS ILE ILE GLU LEU SEQRES 12 A 498 ASN GLY GLY GLN PRO PRO LEU THR TYR LYS ARG PHE GLN SEQRES 13 A 498 THR LEU VAL SER LYS MET GLU PRO LEU GLU MET PRO ALA SEQRES 14 A 498 ASP THR ILE THR SER ASP VAL ILE GLY LYS CYS MET THR SEQRES 15 A 498 PRO LEU SER ASP ASP HIS ASP GLU LYS TYR GLY VAL PRO SEQRES 16 A 498 SER LEU GLU GLU LEU GLY PHE ASP THR ASP GLY LEU SER SEQRES 17 A 498 SER ALA VAL TRP PRO GLY GLY GLU THR GLU ALA LEU THR SEQRES 18 A 498 ARG LEU GLU ARG HIS LEU GLU ARG LYS ALA TRP VAL ALA SEQRES 19 A 498 ASN PHE GLU ARG PRO ARG MET ASN ALA ASN SER LEU LEU SEQRES 20 A 498 ALA SER PRO THR GLY LEU SER PRO TYR LEU ARG PHE GLY SEQRES 21 A 498 CYS LEU SER CYS ARG LEU PHE TYR PHE LYS LEU THR ASP SEQRES 22 A 498 LEU TYR LYS LYS VAL LYS LYS ASN SER SER PRO PRO LEU SEQRES 23 A 498 SER LEU TYR GLY GLN LEU LEU TRP ARG GLU PHE PHE TYR SEQRES 24 A 498 THR ALA ALA THR ASN ASN PRO ARG PHE ASP LYS MET GLU SEQRES 25 A 498 GLY ASN PRO ILE CYS VAL GLN ILE PRO TRP ASP LYS ASN SEQRES 26 A 498 PRO GLU ALA LEU ALA LYS TRP ALA GLU GLY ARG THR GLY SEQRES 27 A 498 PHE PRO TRP ILE ASP ALA ILE MET THR GLN LEU ARG GLN SEQRES 28 A 498 GLU GLY TRP ILE HIS HIS LEU ALA ARG HIS ALA VAL ALA SEQRES 29 A 498 CYS PHE LEU THR ARG GLY ASP LEU TRP ILE SER TRP GLU SEQRES 30 A 498 GLU GLY MET LYS VAL PHE GLU GLU LEU LEU LEU ASP ALA SEQRES 31 A 498 ASP TRP SER ILE ASN ALA GLY SER TRP MET TRP LEU SER SEQRES 32 A 498 CYS SER SER PHE PHE GLN GLN PHE PHE HIS CYS TYR CYS SEQRES 33 A 498 PRO VAL GLY PHE GLY ARG ARG THR ASP PRO ASN GLY ASP SEQRES 34 A 498 TYR ILE ARG ARG TYR LEU PRO VAL LEU ARG GLY PHE PRO SEQRES 35 A 498 ALA LYS TYR ILE TYR ASP PRO TRP ASN ALA PRO GLU GLY SEQRES 36 A 498 ILE GLN LYS VAL ALA LYS CYS LEU ILE GLY VAL ASN TYR SEQRES 37 A 498 PRO LYS PRO MET VAL ASN HIS ALA GLU ALA SER ARG LEU SEQRES 38 A 498 ASN ILE GLU ARG MET LYS GLN ILE TYR GLN GLN LEU SER SEQRES 39 A 498 ARG TYR ARG GLY HET GOF A 501 35 HETNAM GOF N-[2-(4-METHOXYPHENYL)-5,5-BIS(OXIDANYLIDENE)-4,6- HETNAM 2 GOF DIHYDROTHIENO[3,4-C]PYRAZOL-3-YL]-4-(PHENYLCARBONYL) HETNAM 3 GOF BENZAMIDE FORMUL 2 GOF C26 H21 N3 O5 S FORMUL 3 HOH *262(H2 O) HELIX 1 AA1 ASN A 18 GLN A 26 1 9 HELIX 2 AA2 PHE A 41 SER A 45 5 5 HELIX 3 AA3 GLY A 48 LYS A 68 1 21 HELIX 4 AA4 GLN A 79 ASN A 92 1 14 HELIX 5 AA5 GLU A 103 ALA A 120 1 18 HELIX 6 AA6 ASP A 134 ASN A 142 1 9 HELIX 7 AA7 THR A 149 LYS A 159 1 11 HELIX 8 AA8 THR A 171 GLY A 176 1 6 HELIX 9 AA9 ASP A 185 GLY A 191 1 7 HELIX 10 AB1 LEU A 195 GLY A 199 5 5 HELIX 11 AB2 GLY A 213 TRP A 230 1 18 HELIX 12 AB3 ASN A 240 LEU A 245 5 6 HELIX 13 AB4 LEU A 251 PHE A 257 1 7 HELIX 14 AB5 SER A 261 LYS A 278 1 18 HELIX 15 AB6 PRO A 283 GLY A 288 5 6 HELIX 16 AB7 GLN A 289 THR A 301 1 13 HELIX 17 AB8 ASN A 323 GLU A 332 1 10 HELIX 18 AB9 PHE A 337 GLY A 351 1 15 HELIX 19 AC1 HIS A 354 THR A 366 1 13 HELIX 20 AC2 SER A 373 LEU A 385 1 13 HELIX 21 AC3 ASP A 389 SER A 401 1 13 HELIX 22 AC4 VAL A 416 ASP A 423 1 8 HELIX 23 AC5 GLY A 426 LEU A 433 1 8 HELIX 24 AC6 PRO A 434 ARG A 437 5 4 HELIX 25 AC7 PRO A 440 TYR A 445 1 6 HELIX 26 AC8 ASP A 446 ALA A 450 5 5 HELIX 27 AC9 PRO A 451 ALA A 458 1 8 HELIX 28 AD1 ASN A 472 GLN A 490 1 19 HELIX 29 AD2 LEU A 491 ARG A 495 5 5 SHEET 1 AA1 5 LEU A 73 ARG A 77 0 SHEET 2 AA1 5 THR A 30 LEU A 37 1 N TYR A 35 O ILE A 76 SHEET 3 AA1 5 ASN A 4 PHE A 9 1 N PHE A 9 O VAL A 34 SHEET 4 AA1 5 LYS A 95 GLU A 99 1 O SER A 97 N TRP A 8 SHEET 5 AA1 5 GLU A 123 ARG A 127 1 O ILE A 125 N LEU A 96 SITE 1 AC1 16 THR A 202 ASP A 203 GLN A 289 TRP A 292 SITE 2 AC1 16 ARG A 293 HIS A 355 ARG A 358 ALA A 362 SITE 3 AC1 16 PHE A 381 ASP A 387 ILE A 392 ASN A 393 SITE 4 AC1 16 SER A 396 TRP A 397 TRP A 399 LEU A 400 CRYST1 45.078 79.148 133.139 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022184 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012635 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007511 0.00000