data_7D2Z # _entry.id 7D2Z # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7D2Z pdb_00007d2z 10.2210/pdb7d2z/pdb WWPDB D_1300016918 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7D2Z _pdbx_database_status.recvd_initial_deposition_date 2020-09-17 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Li, T.' 1 ? 'Cai, H.' 2 ? 'Yao, H.' 3 ? 'Qin, W.' 4 ? 'Li, D.' 5 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Plos Pathog.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1553-7374 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 17 _citation.language ? _citation.page_first e1009328 _citation.page_last e1009328 _citation.title ;A high-affinity RBD-targeting nanobody improves fusion partner's potency against SARS-CoV-2. ; _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1371/journal.ppat.1009328 _citation.pdbx_database_id_PubMed 33657135 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yao, H.' 1 0000-0002-8588-5877 primary 'Cai, H.' 2 0000-0001-7221-8330 primary 'Li, T.' 3 0000-0003-3146-2761 primary 'Zhou, B.' 4 0000-0002-7753-4065 primary 'Qin, W.' 5 0000-0002-8157-6647 primary 'Lavillette, D.' 6 0000-0002-4706-1519 primary 'Li, D.' 7 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 7D2Z _cell.details ? _cell.formula_units_Z ? _cell.length_a 92.393 _cell.length_a_esd ? _cell.length_b 92.393 _cell.length_b_esd ? _cell.length_c 101.145 _cell.length_c_esd ? _cell.volume 747744.433 _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7D2Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ;P 31 2" ; _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'SR31 against SARS-CoV-2 RBD, non neutralizing' 15722.449 1 ? ? ? ? 2 polymer man 'Spike protein S1' 23747.643 1 ? ? 'Receptor binding domain (RBD)' ? 3 branched man ;alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)][alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose ; 1203.105 1 ? ? ? ? 4 non-polymer syn 'FORMIC ACID' 46.025 13 ? ? ? ? 5 non-polymer syn GLYCEROL 92.094 5 ? ? ? ? 6 non-polymer syn 'ACETATE ION' 59.044 2 ? ? ? ? 7 water nat water 18.015 166 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'S glycoprotein,E2,Peplomer protein' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSSSQVQLVESGGGLVQAGGSLRLSCAASGFPVWQGEMAWYRQAPGKEREWVAAISSMGYKTYYADSVKGRFTISRDNAK NTVYLQMNSLKPEDTAVYYCAVMVGFWYAGQGTQVTVSAGRAGEQKLISEEDLNSAVDHHHHHH ; ;GSSSQVQLVESGGGLVQAGGSLRLSCAASGFPVWQGEMAWYRQAPGKEREWVAAISSMGYKTYYADSVKGRFTISRDNAK NTVYLQMNSLKPEDTAVYYCAVMVGFWYAGQGTQVTVSAGRAGEQKLISEEDLNSAVDHHHHHH ; A ? 2 'polypeptide(L)' no no ;AGSPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDE VRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGF NCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTGTLEVLFQ ; ;AGSPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDE VRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGF NCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTGTLEVLFQ ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 SER n 1 5 GLN n 1 6 VAL n 1 7 GLN n 1 8 LEU n 1 9 VAL n 1 10 GLU n 1 11 SER n 1 12 GLY n 1 13 GLY n 1 14 GLY n 1 15 LEU n 1 16 VAL n 1 17 GLN n 1 18 ALA n 1 19 GLY n 1 20 GLY n 1 21 SER n 1 22 LEU n 1 23 ARG n 1 24 LEU n 1 25 SER n 1 26 CYS n 1 27 ALA n 1 28 ALA n 1 29 SER n 1 30 GLY n 1 31 PHE n 1 32 PRO n 1 33 VAL n 1 34 TRP n 1 35 GLN n 1 36 GLY n 1 37 GLU n 1 38 MET n 1 39 ALA n 1 40 TRP n 1 41 TYR n 1 42 ARG n 1 43 GLN n 1 44 ALA n 1 45 PRO n 1 46 GLY n 1 47 LYS n 1 48 GLU n 1 49 ARG n 1 50 GLU n 1 51 TRP n 1 52 VAL n 1 53 ALA n 1 54 ALA n 1 55 ILE n 1 56 SER n 1 57 SER n 1 58 MET n 1 59 GLY n 1 60 TYR n 1 61 LYS n 1 62 THR n 1 63 TYR n 1 64 TYR n 1 65 ALA n 1 66 ASP n 1 67 SER n 1 68 VAL n 1 69 LYS n 1 70 GLY n 1 71 ARG n 1 72 PHE n 1 73 THR n 1 74 ILE n 1 75 SER n 1 76 ARG n 1 77 ASP n 1 78 ASN n 1 79 ALA n 1 80 LYS n 1 81 ASN n 1 82 THR n 1 83 VAL n 1 84 TYR n 1 85 LEU n 1 86 GLN n 1 87 MET n 1 88 ASN n 1 89 SER n 1 90 LEU n 1 91 LYS n 1 92 PRO n 1 93 GLU n 1 94 ASP n 1 95 THR n 1 96 ALA n 1 97 VAL n 1 98 TYR n 1 99 TYR n 1 100 CYS n 1 101 ALA n 1 102 VAL n 1 103 MET n 1 104 VAL n 1 105 GLY n 1 106 PHE n 1 107 TRP n 1 108 TYR n 1 109 ALA n 1 110 GLY n 1 111 GLN n 1 112 GLY n 1 113 THR n 1 114 GLN n 1 115 VAL n 1 116 THR n 1 117 VAL n 1 118 SER n 1 119 ALA n 1 120 GLY n 1 121 ARG n 1 122 ALA n 1 123 GLY n 1 124 GLU n 1 125 GLN n 1 126 LYS n 1 127 LEU n 1 128 ILE n 1 129 SER n 1 130 GLU n 1 131 GLU n 1 132 ASP n 1 133 LEU n 1 134 ASN n 1 135 SER n 1 136 ALA n 1 137 VAL n 1 138 ASP n 1 139 HIS n 1 140 HIS n 1 141 HIS n 1 142 HIS n 1 143 HIS n 1 144 HIS n 2 1 ALA n 2 2 GLY n 2 3 SER n 2 4 PRO n 2 5 ASN n 2 6 ILE n 2 7 THR n 2 8 ASN n 2 9 LEU n 2 10 CYS n 2 11 PRO n 2 12 PHE n 2 13 GLY n 2 14 GLU n 2 15 VAL n 2 16 PHE n 2 17 ASN n 2 18 ALA n 2 19 THR n 2 20 ARG n 2 21 PHE n 2 22 ALA n 2 23 SER n 2 24 VAL n 2 25 TYR n 2 26 ALA n 2 27 TRP n 2 28 ASN n 2 29 ARG n 2 30 LYS n 2 31 ARG n 2 32 ILE n 2 33 SER n 2 34 ASN n 2 35 CYS n 2 36 VAL n 2 37 ALA n 2 38 ASP n 2 39 TYR n 2 40 SER n 2 41 VAL n 2 42 LEU n 2 43 TYR n 2 44 ASN n 2 45 SER n 2 46 ALA n 2 47 SER n 2 48 PHE n 2 49 SER n 2 50 THR n 2 51 PHE n 2 52 LYS n 2 53 CYS n 2 54 TYR n 2 55 GLY n 2 56 VAL n 2 57 SER n 2 58 PRO n 2 59 THR n 2 60 LYS n 2 61 LEU n 2 62 ASN n 2 63 ASP n 2 64 LEU n 2 65 CYS n 2 66 PHE n 2 67 THR n 2 68 ASN n 2 69 VAL n 2 70 TYR n 2 71 ALA n 2 72 ASP n 2 73 SER n 2 74 PHE n 2 75 VAL n 2 76 ILE n 2 77 ARG n 2 78 GLY n 2 79 ASP n 2 80 GLU n 2 81 VAL n 2 82 ARG n 2 83 GLN n 2 84 ILE n 2 85 ALA n 2 86 PRO n 2 87 GLY n 2 88 GLN n 2 89 THR n 2 90 GLY n 2 91 LYS n 2 92 ILE n 2 93 ALA n 2 94 ASP n 2 95 TYR n 2 96 ASN n 2 97 TYR n 2 98 LYS n 2 99 LEU n 2 100 PRO n 2 101 ASP n 2 102 ASP n 2 103 PHE n 2 104 THR n 2 105 GLY n 2 106 CYS n 2 107 VAL n 2 108 ILE n 2 109 ALA n 2 110 TRP n 2 111 ASN n 2 112 SER n 2 113 ASN n 2 114 ASN n 2 115 LEU n 2 116 ASP n 2 117 SER n 2 118 LYS n 2 119 VAL n 2 120 GLY n 2 121 GLY n 2 122 ASN n 2 123 TYR n 2 124 ASN n 2 125 TYR n 2 126 LEU n 2 127 TYR n 2 128 ARG n 2 129 LEU n 2 130 PHE n 2 131 ARG n 2 132 LYS n 2 133 SER n 2 134 ASN n 2 135 LEU n 2 136 LYS n 2 137 PRO n 2 138 PHE n 2 139 GLU n 2 140 ARG n 2 141 ASP n 2 142 ILE n 2 143 SER n 2 144 THR n 2 145 GLU n 2 146 ILE n 2 147 TYR n 2 148 GLN n 2 149 ALA n 2 150 GLY n 2 151 SER n 2 152 THR n 2 153 PRO n 2 154 CYS n 2 155 ASN n 2 156 GLY n 2 157 VAL n 2 158 GLU n 2 159 GLY n 2 160 PHE n 2 161 ASN n 2 162 CYS n 2 163 TYR n 2 164 PHE n 2 165 PRO n 2 166 LEU n 2 167 GLN n 2 168 SER n 2 169 TYR n 2 170 GLY n 2 171 PHE n 2 172 GLN n 2 173 PRO n 2 174 THR n 2 175 ASN n 2 176 GLY n 2 177 VAL n 2 178 GLY n 2 179 TYR n 2 180 GLN n 2 181 PRO n 2 182 TYR n 2 183 ARG n 2 184 VAL n 2 185 VAL n 2 186 VAL n 2 187 LEU n 2 188 SER n 2 189 PHE n 2 190 GLU n 2 191 LEU n 2 192 LEU n 2 193 HIS n 2 194 ALA n 2 195 PRO n 2 196 ALA n 2 197 THR n 2 198 VAL n 2 199 CYS n 2 200 GLY n 2 201 PRO n 2 202 LYS n 2 203 LYS n 2 204 SER n 2 205 THR n 2 206 GLY n 2 207 THR n 2 208 LEU n 2 209 GLU n 2 210 VAL n 2 211 LEU n 2 212 PHE n 2 213 GLN n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 144 ? ? ? ? ? ? ? ? ? 'synthetic construct' 32630 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 213 2019-nCoV ? 'S, 2' ? ? ? ? ? ? 'Severe acute respiratory syndrome coronavirus 2' 2697049 ? ? ? ? ? ? ? ? 'Trichoplusia ni' 7111 ? ? ? ? ? ? Hi5 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 7D2Z 7D2Z ? 1 ? 1 2 UNP SPIKE_SARS2 P0DTC2 ? 2 ;PNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQ IAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCY FPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKST ; 330 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7D2Z A 1 ? 144 ? 7D2Z -3 ? 140 ? -3 140 2 2 7D2Z B 4 ? 205 ? P0DTC2 330 ? 531 ? 330 531 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 2 7D2Z ALA B 1 ? UNP P0DTC2 ? ? 'expression tag' 327 1 2 7D2Z GLY B 2 ? UNP P0DTC2 ? ? 'expression tag' 328 2 2 7D2Z SER B 3 ? UNP P0DTC2 ? ? 'expression tag' 329 3 2 7D2Z GLY B 206 ? UNP P0DTC2 ? ? 'expression tag' 532 4 2 7D2Z THR B 207 ? UNP P0DTC2 ? ? 'expression tag' 533 5 2 7D2Z LEU B 208 ? UNP P0DTC2 ? ? 'expression tag' 534 6 2 7D2Z GLU B 209 ? UNP P0DTC2 ? ? 'expression tag' 535 7 2 7D2Z VAL B 210 ? UNP P0DTC2 ? ? 'expression tag' 536 8 2 7D2Z LEU B 211 ? UNP P0DTC2 ? ? 'expression tag' 537 9 2 7D2Z PHE B 212 ? UNP P0DTC2 ? ? 'expression tag' 538 10 2 7D2Z GLN B 213 ? UNP P0DTC2 ? ? 'expression tag' 539 11 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FMT non-polymer . 'FORMIC ACID' ? 'C H2 O2' 46.025 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose 'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7D2Z _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.38 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 63.63 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '2.0M sodium formate, 0.1M sodium acetate trihydrate pH 4.6' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-05-06 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97853 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL19U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97853 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL19U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate 42.58 _reflns.entry_id 7D2Z _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.97 _reflns.d_resolution_low 19.62 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 35708 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.85 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 19.8 _reflns.pdbx_Rmerge_I_obs 0.0907 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 19.48 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.02094 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.97 _reflns_shell.d_res_low 2.04 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.67 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 3516 _reflns_shell.percent_possible_all 99.97 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 18.8 _reflns_shell.pdbx_Rsym_value 1.425 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.3355 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.819 _reflns_shell.pdbx_CC_star 0.949 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 49.49 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7D2Z _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.97 _refine.ls_d_res_low 19.62 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 35704 _refine.ls_number_reflns_R_free 1738 _refine.ls_number_reflns_R_work 33966 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.98 _refine.ls_percent_reflns_R_free 4.87 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1835 _refine.ls_R_factor_R_free 0.2070 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1822 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 6M0J _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 23.0954 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2057 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.97 _refine_hist.d_res_low 19.62 _refine_hist.number_atoms_solvent 166 _refine_hist.number_atoms_total 2890 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 2566 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 158 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0078 ? 2803 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.8675 ? 3785 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0543 ? 420 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0046 ? 476 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 14.1115 ? 448 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.97 2.03 . . 109 2794 99.97 . . . 0.2525 . 0.2538 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.03 2.09 . . 145 2803 99.97 . . . 0.2938 . 0.2396 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.09 2.17 . . 147 2790 99.90 . . . 0.2577 . 0.2193 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.17 2.25 . . 142 2820 100.00 . . . 0.2631 . 0.2041 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.25 2.36 . . 154 2778 100.00 . . . 0.2185 . 0.1887 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.36 2.48 . . 139 2795 100.00 . . . 0.2042 . 0.2004 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.48 2.64 . . 121 2877 100.00 . . . 0.2327 . 0.2111 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.64 2.84 . . 145 2789 100.00 . . . 0.2684 . 0.2128 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.84 3.12 . . 156 2825 100.00 . . . 0.2263 . 0.2116 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.12 3.57 . . 149 2875 100.00 . . . 0.2102 . 0.1909 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.57 4.49 . . 186 2812 100.00 . . . 0.1843 . 0.1581 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.49 19.62 . . 145 3008 100.00 . . . 0.1757 . 0.1512 . . . . . . . . . . . # _struct.entry_id 7D2Z _struct.title 'Structure of sybody SR31 in complex with the SARS-CoV-2 S Receptor Binding domain (RBD)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7D2Z _struct_keywords.text ;coronavirus, Covid-19, nanobody, neutralizing antibody, receptor binding protein, SARS-CoV-2, S protein, synthetic antibody, VHH., PROTEIN BINDING ; _struct_keywords.pdbx_keywords 'PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 4 ? I N N 6 ? J N N 4 ? K N N 4 ? L N N 4 ? M N N 4 ? N N N 4 ? O N N 5 ? P N N 5 ? Q N N 5 ? R N N 4 ? S N N 4 ? T N N 5 ? U N N 4 ? V N N 4 ? W N N 4 ? X N N 7 ? Y N N 7 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 32 ? GLY A 36 ? PRO A 28 GLY A 32 5 ? 5 HELX_P HELX_P2 AA2 ASP A 66 ? LYS A 69 ? ASP A 62 LYS A 65 5 ? 4 HELX_P HELX_P3 AA3 LYS A 91 ? THR A 95 ? LYS A 87 THR A 91 5 ? 5 HELX_P HELX_P4 AA4 ASN B 5 ? LEU B 9 ? ASN B 331 LEU B 335 5 ? 5 HELX_P HELX_P5 AA5 PRO B 11 ? ALA B 18 ? PRO B 337 ALA B 344 1 ? 8 HELX_P HELX_P6 AA6 SER B 23 ? TRP B 27 ? SER B 349 TRP B 353 5 ? 5 HELX_P HELX_P7 AA7 SER B 57 ? ASP B 63 ? SER B 383 ASP B 389 5 ? 7 HELX_P HELX_P8 AA8 ASP B 79 ? ILE B 84 ? ASP B 405 ILE B 410 5 ? 6 HELX_P HELX_P9 AA9 GLY B 90 ? ASN B 96 ? GLY B 416 ASN B 422 1 ? 7 HELX_P HELX_P10 AB1 SER B 112 ? SER B 117 ? SER B 438 SER B 443 1 ? 6 HELX_P HELX_P11 AB2 GLY B 176 ? TYR B 179 ? GLY B 502 TYR B 505 5 ? 4 HELX_P HELX_P12 AB3 GLY B 206 ? GLN B 213 ? GLY B 532 GLN B 539 5 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 26 SG ? ? ? 1_555 A CYS 100 SG ? ? A CYS 22 A CYS 96 1_555 ? ? ? ? ? ? ? 2.026 ? ? disulf2 disulf ? ? B CYS 10 SG ? ? ? 1_555 B CYS 35 SG ? ? B CYS 336 B CYS 361 1_555 ? ? ? ? ? ? ? 2.025 ? ? disulf3 disulf ? ? B CYS 53 SG ? ? ? 1_555 B CYS 106 SG ? ? B CYS 379 B CYS 432 1_555 ? ? ? ? ? ? ? 2.053 ? ? disulf4 disulf ? ? B CYS 65 SG ? ? ? 1_555 B CYS 199 SG ? ? B CYS 391 B CYS 525 1_555 ? ? ? ? ? ? ? 2.051 ? ? disulf5 disulf ? ? B CYS 154 SG ? ? ? 1_555 B CYS 162 SG ? ? B CYS 480 B CYS 488 1_555 ? ? ? ? ? ? ? 2.035 ? ? covale1 covale one ? B ASN 17 ND2 ? ? ? 1_555 C NAG . C1 ? ? B ASN 343 C NAG 1 1_555 ? ? ? ? ? ? ? 1.436 ? N-Glycosylation covale2 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.444 ? ? covale3 covale both ? C NAG . O3 ? ? ? 1_555 C FUC . C1 ? ? C NAG 1 C FUC 6 1_555 ? ? ? ? ? ? ? 1.448 ? ? covale4 covale both ? C NAG . O6 ? ? ? 1_555 C FUC . C1 ? ? C NAG 1 C FUC 7 1_555 ? ? ? ? ? ? ? 1.441 ? ? covale5 covale both ? C NAG . O4 ? ? ? 1_555 C BMA . C1 ? ? C NAG 2 C BMA 3 1_555 ? ? ? ? ? ? ? 1.440 ? ? covale6 covale both ? C BMA . O3 ? ? ? 1_555 C MAN . C1 ? ? C BMA 3 C MAN 4 1_555 ? ? ? ? ? ? ? 1.447 ? ? covale7 covale both ? C BMA . O6 ? ? ? 1_555 C MAN . C1 ? ? C BMA 3 C MAN 5 1_555 ? ? ? ? ? ? ? 1.450 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 4 ? AA3 ? 6 ? AA4 ? 5 ? AA5 ? 2 ? AA6 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA3 5 6 ? anti-parallel AA4 1 2 ? parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA4 4 5 ? parallel AA5 1 2 ? anti-parallel AA6 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER A 3 ? GLN A 5 ? SER A -1 GLN A 1 AA1 2 THR B 50 ? TYR B 54 ? THR B 376 TYR B 380 AA1 3 GLY B 105 ? ASN B 111 ? GLY B 431 ASN B 437 AA1 4 PRO B 181 ? LEU B 191 ? PRO B 507 LEU B 517 AA1 5 THR B 67 ? ARG B 77 ? THR B 393 ARG B 403 AA1 6 ASN B 28 ? ILE B 32 ? ASN B 354 ILE B 358 AA2 1 GLN A 7 ? SER A 11 ? GLN A 3 SER A 7 AA2 2 LEU A 22 ? SER A 29 ? LEU A 18 SER A 25 AA2 3 THR A 82 ? MET A 87 ? THR A 78 MET A 83 AA2 4 PHE A 72 ? ASP A 77 ? PHE A 68 ASP A 73 AA3 1 GLY A 14 ? VAL A 16 ? GLY A 10 VAL A 12 AA3 2 THR A 113 ? VAL A 117 ? THR A 109 VAL A 113 AA3 3 ALA A 96 ? MET A 103 ? ALA A 92 MET A 99 AA3 4 MET A 38 ? GLN A 43 ? MET A 34 GLN A 39 AA3 5 ARG A 49 ? ILE A 55 ? ARG A 45 ILE A 51 AA3 6 THR A 62 ? TYR A 64 ? THR A 58 TYR A 60 AA4 1 GLY A 14 ? VAL A 16 ? GLY A 10 VAL A 12 AA4 2 THR A 113 ? VAL A 117 ? THR A 109 VAL A 113 AA4 3 ALA A 96 ? MET A 103 ? ALA A 92 MET A 99 AA4 4 TRP A 107 ? ALA A 109 ? TRP A 103 ALA A 105 AA4 5 LEU B 42 ? TYR B 43 ? LEU B 368 TYR B 369 AA5 1 LEU B 126 ? ARG B 128 ? LEU B 452 ARG B 454 AA5 2 LEU B 166 ? SER B 168 ? LEU B 492 SER B 494 AA6 1 TYR B 147 ? GLN B 148 ? TYR B 473 GLN B 474 AA6 2 CYS B 162 ? TYR B 163 ? CYS B 488 TYR B 489 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N SER A 4 ? N SER A 0 O CYS B 53 ? O CYS B 379 AA1 2 3 N TYR B 54 ? N TYR B 380 O GLY B 105 ? O GLY B 431 AA1 3 4 N ILE B 108 ? N ILE B 434 O VAL B 185 ? O VAL B 511 AA1 4 5 O VAL B 186 ? O VAL B 512 N ASP B 72 ? N ASP B 398 AA1 5 6 O VAL B 69 ? O VAL B 395 N ILE B 32 ? N ILE B 358 AA2 1 2 N GLN A 7 ? N GLN A 3 O SER A 29 ? O SER A 25 AA2 2 3 N LEU A 22 ? N LEU A 18 O MET A 87 ? O MET A 83 AA2 3 4 O GLN A 86 ? O GLN A 82 N THR A 73 ? N THR A 69 AA3 1 2 N VAL A 16 ? N VAL A 12 O THR A 116 ? O THR A 112 AA3 2 3 O THR A 113 ? O THR A 109 N TYR A 98 ? N TYR A 94 AA3 3 4 O TYR A 99 ? O TYR A 95 N TYR A 41 ? N TYR A 37 AA3 4 5 N TRP A 40 ? N TRP A 36 O ALA A 53 ? O ALA A 49 AA3 5 6 N ALA A 54 ? N ALA A 50 O TYR A 63 ? O TYR A 59 AA4 1 2 N VAL A 16 ? N VAL A 12 O THR A 116 ? O THR A 112 AA4 2 3 O THR A 113 ? O THR A 109 N TYR A 98 ? N TYR A 94 AA4 3 4 N VAL A 102 ? N VAL A 98 O TYR A 108 ? O TYR A 104 AA4 4 5 N ALA A 109 ? N ALA A 105 O TYR B 43 ? O TYR B 369 AA5 1 2 N TYR B 127 ? N TYR B 453 O GLN B 167 ? O GLN B 493 AA6 1 2 N TYR B 147 ? N TYR B 473 O TYR B 163 ? O TYR B 489 # _atom_sites.entry_id 7D2Z _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.010823 _atom_sites.fract_transf_matrix[1][2] 0.006249 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012498 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009887 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? NA ? ? 9.38062 1.54875 ? ? 3.38349 72.32734 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -3 ? ? ? A . n A 1 2 SER 2 -2 -2 SER SER A . n A 1 3 SER 3 -1 -1 SER SER A . n A 1 4 SER 4 0 0 SER SER A . n A 1 5 GLN 5 1 1 GLN GLN A . n A 1 6 VAL 6 2 2 VAL VAL A . n A 1 7 GLN 7 3 3 GLN GLN A . n A 1 8 LEU 8 4 4 LEU LEU A . n A 1 9 VAL 9 5 5 VAL VAL A . n A 1 10 GLU 10 6 6 GLU GLU A . n A 1 11 SER 11 7 7 SER SER A . n A 1 12 GLY 12 8 8 GLY GLY A . n A 1 13 GLY 13 9 9 GLY GLY A . n A 1 14 GLY 14 10 10 GLY GLY A . n A 1 15 LEU 15 11 11 LEU LEU A . n A 1 16 VAL 16 12 12 VAL VAL A . n A 1 17 GLN 17 13 13 GLN GLN A . n A 1 18 ALA 18 14 14 ALA ALA A . n A 1 19 GLY 19 15 15 GLY GLY A . n A 1 20 GLY 20 16 16 GLY GLY A . n A 1 21 SER 21 17 17 SER SER A . n A 1 22 LEU 22 18 18 LEU LEU A . n A 1 23 ARG 23 19 19 ARG ARG A . n A 1 24 LEU 24 20 20 LEU LEU A . n A 1 25 SER 25 21 21 SER SER A . n A 1 26 CYS 26 22 22 CYS CYS A . n A 1 27 ALA 27 23 23 ALA ALA A . n A 1 28 ALA 28 24 24 ALA ALA A . n A 1 29 SER 29 25 25 SER SER A . n A 1 30 GLY 30 26 26 GLY GLY A . n A 1 31 PHE 31 27 27 PHE PHE A . n A 1 32 PRO 32 28 28 PRO PRO A . n A 1 33 VAL 33 29 29 VAL VAL A . n A 1 34 TRP 34 30 30 TRP TRP A . n A 1 35 GLN 35 31 31 GLN GLN A . n A 1 36 GLY 36 32 32 GLY GLY A . n A 1 37 GLU 37 33 33 GLU GLU A . n A 1 38 MET 38 34 34 MET MET A . n A 1 39 ALA 39 35 35 ALA ALA A . n A 1 40 TRP 40 36 36 TRP TRP A . n A 1 41 TYR 41 37 37 TYR TYR A . n A 1 42 ARG 42 38 38 ARG ARG A . n A 1 43 GLN 43 39 39 GLN GLN A . n A 1 44 ALA 44 40 40 ALA ALA A . n A 1 45 PRO 45 41 41 PRO PRO A . n A 1 46 GLY 46 42 42 GLY GLY A . n A 1 47 LYS 47 43 43 LYS LYS A . n A 1 48 GLU 48 44 44 GLU GLU A . n A 1 49 ARG 49 45 45 ARG ARG A . n A 1 50 GLU 50 46 46 GLU GLU A . n A 1 51 TRP 51 47 47 TRP TRP A . n A 1 52 VAL 52 48 48 VAL VAL A . n A 1 53 ALA 53 49 49 ALA ALA A . n A 1 54 ALA 54 50 50 ALA ALA A . n A 1 55 ILE 55 51 51 ILE ILE A . n A 1 56 SER 56 52 52 SER SER A . n A 1 57 SER 57 53 53 SER SER A . n A 1 58 MET 58 54 54 MET MET A . n A 1 59 GLY 59 55 55 GLY GLY A . n A 1 60 TYR 60 56 56 TYR TYR A . n A 1 61 LYS 61 57 57 LYS LYS A . n A 1 62 THR 62 58 58 THR THR A . n A 1 63 TYR 63 59 59 TYR TYR A . n A 1 64 TYR 64 60 60 TYR TYR A . n A 1 65 ALA 65 61 61 ALA ALA A . n A 1 66 ASP 66 62 62 ASP ASP A . n A 1 67 SER 67 63 63 SER SER A . n A 1 68 VAL 68 64 64 VAL VAL A . n A 1 69 LYS 69 65 65 LYS LYS A . n A 1 70 GLY 70 66 66 GLY GLY A . n A 1 71 ARG 71 67 67 ARG ARG A . n A 1 72 PHE 72 68 68 PHE PHE A . n A 1 73 THR 73 69 69 THR THR A . n A 1 74 ILE 74 70 70 ILE ILE A . n A 1 75 SER 75 71 71 SER SER A . n A 1 76 ARG 76 72 72 ARG ARG A . n A 1 77 ASP 77 73 73 ASP ASP A . n A 1 78 ASN 78 74 74 ASN ASN A . n A 1 79 ALA 79 75 75 ALA ALA A . n A 1 80 LYS 80 76 76 LYS LYS A . n A 1 81 ASN 81 77 77 ASN ASN A . n A 1 82 THR 82 78 78 THR THR A . n A 1 83 VAL 83 79 79 VAL VAL A . n A 1 84 TYR 84 80 80 TYR TYR A . n A 1 85 LEU 85 81 81 LEU LEU A . n A 1 86 GLN 86 82 82 GLN GLN A . n A 1 87 MET 87 83 83 MET MET A . n A 1 88 ASN 88 84 84 ASN ASN A . n A 1 89 SER 89 85 85 SER SER A . n A 1 90 LEU 90 86 86 LEU LEU A . n A 1 91 LYS 91 87 87 LYS LYS A . n A 1 92 PRO 92 88 88 PRO PRO A . n A 1 93 GLU 93 89 89 GLU GLU A . n A 1 94 ASP 94 90 90 ASP ASP A . n A 1 95 THR 95 91 91 THR THR A . n A 1 96 ALA 96 92 92 ALA ALA A . n A 1 97 VAL 97 93 93 VAL VAL A . n A 1 98 TYR 98 94 94 TYR TYR A . n A 1 99 TYR 99 95 95 TYR TYR A . n A 1 100 CYS 100 96 96 CYS CYS A . n A 1 101 ALA 101 97 97 ALA ALA A . n A 1 102 VAL 102 98 98 VAL VAL A . n A 1 103 MET 103 99 99 MET MET A . n A 1 104 VAL 104 100 100 VAL VAL A . n A 1 105 GLY 105 101 101 GLY GLY A . n A 1 106 PHE 106 102 102 PHE PHE A . n A 1 107 TRP 107 103 103 TRP TRP A . n A 1 108 TYR 108 104 104 TYR TYR A . n A 1 109 ALA 109 105 105 ALA ALA A . n A 1 110 GLY 110 106 106 GLY GLY A . n A 1 111 GLN 111 107 107 GLN GLN A . n A 1 112 GLY 112 108 108 GLY GLY A . n A 1 113 THR 113 109 109 THR THR A . n A 1 114 GLN 114 110 110 GLN GLN A . n A 1 115 VAL 115 111 111 VAL VAL A . n A 1 116 THR 116 112 112 THR THR A . n A 1 117 VAL 117 113 113 VAL VAL A . n A 1 118 SER 118 114 114 SER SER A . n A 1 119 ALA 119 115 ? ? ? A . n A 1 120 GLY 120 116 ? ? ? A . n A 1 121 ARG 121 117 ? ? ? A . n A 1 122 ALA 122 118 ? ? ? A . n A 1 123 GLY 123 119 ? ? ? A . n A 1 124 GLU 124 120 ? ? ? A . n A 1 125 GLN 125 121 ? ? ? A . n A 1 126 LYS 126 122 ? ? ? A . n A 1 127 LEU 127 123 ? ? ? A . n A 1 128 ILE 128 124 ? ? ? A . n A 1 129 SER 129 125 ? ? ? A . n A 1 130 GLU 130 126 ? ? ? A . n A 1 131 GLU 131 127 ? ? ? A . n A 1 132 ASP 132 128 ? ? ? A . n A 1 133 LEU 133 129 ? ? ? A . n A 1 134 ASN 134 130 ? ? ? A . n A 1 135 SER 135 131 ? ? ? A . n A 1 136 ALA 136 132 ? ? ? A . n A 1 137 VAL 137 133 ? ? ? A . n A 1 138 ASP 138 134 ? ? ? A . n A 1 139 HIS 139 135 ? ? ? A . n A 1 140 HIS 140 136 ? ? ? A . n A 1 141 HIS 141 137 ? ? ? A . n A 1 142 HIS 142 138 ? ? ? A . n A 1 143 HIS 143 139 ? ? ? A . n A 1 144 HIS 144 140 ? ? ? A . n B 2 1 ALA 1 327 ? ? ? B . n B 2 2 GLY 2 328 328 GLY GLY B . n B 2 3 SER 3 329 329 SER SER B . n B 2 4 PRO 4 330 330 PRO PRO B . n B 2 5 ASN 5 331 331 ASN ASN B . n B 2 6 ILE 6 332 332 ILE ILE B . n B 2 7 THR 7 333 333 THR THR B . n B 2 8 ASN 8 334 334 ASN ASN B . n B 2 9 LEU 9 335 335 LEU LEU B . n B 2 10 CYS 10 336 336 CYS CYS B . n B 2 11 PRO 11 337 337 PRO PRO B . n B 2 12 PHE 12 338 338 PHE PHE B . n B 2 13 GLY 13 339 339 GLY GLY B . n B 2 14 GLU 14 340 340 GLU GLU B . n B 2 15 VAL 15 341 341 VAL VAL B . n B 2 16 PHE 16 342 342 PHE PHE B . n B 2 17 ASN 17 343 343 ASN ASN B . n B 2 18 ALA 18 344 344 ALA ALA B . n B 2 19 THR 19 345 345 THR THR B . n B 2 20 ARG 20 346 346 ARG ARG B . n B 2 21 PHE 21 347 347 PHE PHE B . n B 2 22 ALA 22 348 348 ALA ALA B . n B 2 23 SER 23 349 349 SER SER B . n B 2 24 VAL 24 350 350 VAL VAL B . n B 2 25 TYR 25 351 351 TYR TYR B . n B 2 26 ALA 26 352 352 ALA ALA B . n B 2 27 TRP 27 353 353 TRP TRP B . n B 2 28 ASN 28 354 354 ASN ASN B . n B 2 29 ARG 29 355 355 ARG ARG B . n B 2 30 LYS 30 356 356 LYS LYS B . n B 2 31 ARG 31 357 357 ARG ARG B . n B 2 32 ILE 32 358 358 ILE ILE B . n B 2 33 SER 33 359 359 SER SER B . n B 2 34 ASN 34 360 360 ASN ASN B . n B 2 35 CYS 35 361 361 CYS CYS B . n B 2 36 VAL 36 362 362 VAL VAL B . n B 2 37 ALA 37 363 363 ALA ALA B . n B 2 38 ASP 38 364 364 ASP ASP B . n B 2 39 TYR 39 365 365 TYR TYR B . n B 2 40 SER 40 366 366 SER SER B . n B 2 41 VAL 41 367 367 VAL VAL B . n B 2 42 LEU 42 368 368 LEU LEU B . n B 2 43 TYR 43 369 369 TYR TYR B . n B 2 44 ASN 44 370 370 ASN ASN B . n B 2 45 SER 45 371 371 SER SER B . n B 2 46 ALA 46 372 372 ALA ALA B . n B 2 47 SER 47 373 373 SER SER B . n B 2 48 PHE 48 374 374 PHE PHE B . n B 2 49 SER 49 375 375 SER SER B . n B 2 50 THR 50 376 376 THR THR B . n B 2 51 PHE 51 377 377 PHE PHE B . n B 2 52 LYS 52 378 378 LYS LYS B . n B 2 53 CYS 53 379 379 CYS CYS B . n B 2 54 TYR 54 380 380 TYR TYR B . n B 2 55 GLY 55 381 381 GLY GLY B . n B 2 56 VAL 56 382 382 VAL VAL B . n B 2 57 SER 57 383 383 SER SER B . n B 2 58 PRO 58 384 384 PRO PRO B . n B 2 59 THR 59 385 385 THR THR B . n B 2 60 LYS 60 386 386 LYS LYS B . n B 2 61 LEU 61 387 387 LEU LEU B . n B 2 62 ASN 62 388 388 ASN ASN B . n B 2 63 ASP 63 389 389 ASP ASP B . n B 2 64 LEU 64 390 390 LEU LEU B . n B 2 65 CYS 65 391 391 CYS CYS B . n B 2 66 PHE 66 392 392 PHE PHE B . n B 2 67 THR 67 393 393 THR THR B . n B 2 68 ASN 68 394 394 ASN ASN B . n B 2 69 VAL 69 395 395 VAL VAL B . n B 2 70 TYR 70 396 396 TYR TYR B . n B 2 71 ALA 71 397 397 ALA ALA B . n B 2 72 ASP 72 398 398 ASP ASP B . n B 2 73 SER 73 399 399 SER SER B . n B 2 74 PHE 74 400 400 PHE PHE B . n B 2 75 VAL 75 401 401 VAL VAL B . n B 2 76 ILE 76 402 402 ILE ILE B . n B 2 77 ARG 77 403 403 ARG ARG B . n B 2 78 GLY 78 404 404 GLY GLY B . n B 2 79 ASP 79 405 405 ASP ASP B . n B 2 80 GLU 80 406 406 GLU GLU B . n B 2 81 VAL 81 407 407 VAL VAL B . n B 2 82 ARG 82 408 408 ARG ARG B . n B 2 83 GLN 83 409 409 GLN GLN B . n B 2 84 ILE 84 410 410 ILE ILE B . n B 2 85 ALA 85 411 411 ALA ALA B . n B 2 86 PRO 86 412 412 PRO PRO B . n B 2 87 GLY 87 413 413 GLY GLY B . n B 2 88 GLN 88 414 414 GLN GLN B . n B 2 89 THR 89 415 415 THR THR B . n B 2 90 GLY 90 416 416 GLY GLY B . n B 2 91 LYS 91 417 417 LYS LYS B . n B 2 92 ILE 92 418 418 ILE ILE B . n B 2 93 ALA 93 419 419 ALA ALA B . n B 2 94 ASP 94 420 420 ASP ASP B . n B 2 95 TYR 95 421 421 TYR TYR B . n B 2 96 ASN 96 422 422 ASN ASN B . n B 2 97 TYR 97 423 423 TYR TYR B . n B 2 98 LYS 98 424 424 LYS LYS B . n B 2 99 LEU 99 425 425 LEU LEU B . n B 2 100 PRO 100 426 426 PRO PRO B . n B 2 101 ASP 101 427 427 ASP ASP B . n B 2 102 ASP 102 428 428 ASP ASP B . n B 2 103 PHE 103 429 429 PHE PHE B . n B 2 104 THR 104 430 430 THR THR B . n B 2 105 GLY 105 431 431 GLY GLY B . n B 2 106 CYS 106 432 432 CYS CYS B . n B 2 107 VAL 107 433 433 VAL VAL B . n B 2 108 ILE 108 434 434 ILE ILE B . n B 2 109 ALA 109 435 435 ALA ALA B . n B 2 110 TRP 110 436 436 TRP TRP B . n B 2 111 ASN 111 437 437 ASN ASN B . n B 2 112 SER 112 438 438 SER SER B . n B 2 113 ASN 113 439 439 ASN ASN B . n B 2 114 ASN 114 440 440 ASN ASN B . n B 2 115 LEU 115 441 441 LEU LEU B . n B 2 116 ASP 116 442 442 ASP ASP B . n B 2 117 SER 117 443 443 SER SER B . n B 2 118 LYS 118 444 444 LYS LYS B . n B 2 119 VAL 119 445 445 VAL VAL B . n B 2 120 GLY 120 446 446 GLY GLY B . n B 2 121 GLY 121 447 447 GLY GLY B . n B 2 122 ASN 122 448 448 ASN ASN B . n B 2 123 TYR 123 449 449 TYR TYR B . n B 2 124 ASN 124 450 450 ASN ASN B . n B 2 125 TYR 125 451 451 TYR TYR B . n B 2 126 LEU 126 452 452 LEU LEU B . n B 2 127 TYR 127 453 453 TYR TYR B . n B 2 128 ARG 128 454 454 ARG ARG B . n B 2 129 LEU 129 455 455 LEU LEU B . n B 2 130 PHE 130 456 456 PHE PHE B . n B 2 131 ARG 131 457 457 ARG ARG B . n B 2 132 LYS 132 458 458 LYS LYS B . n B 2 133 SER 133 459 459 SER SER B . n B 2 134 ASN 134 460 460 ASN ASN B . n B 2 135 LEU 135 461 461 LEU LEU B . n B 2 136 LYS 136 462 462 LYS LYS B . n B 2 137 PRO 137 463 463 PRO PRO B . n B 2 138 PHE 138 464 464 PHE PHE B . n B 2 139 GLU 139 465 465 GLU GLU B . n B 2 140 ARG 140 466 466 ARG ARG B . n B 2 141 ASP 141 467 467 ASP ASP B . n B 2 142 ILE 142 468 468 ILE ILE B . n B 2 143 SER 143 469 469 SER SER B . n B 2 144 THR 144 470 470 THR THR B . n B 2 145 GLU 145 471 471 GLU GLU B . n B 2 146 ILE 146 472 472 ILE ILE B . n B 2 147 TYR 147 473 473 TYR TYR B . n B 2 148 GLN 148 474 474 GLN GLN B . n B 2 149 ALA 149 475 475 ALA ALA B . n B 2 150 GLY 150 476 476 GLY GLY B . n B 2 151 SER 151 477 477 SER SER B . n B 2 152 THR 152 478 478 THR THR B . n B 2 153 PRO 153 479 479 PRO PRO B . n B 2 154 CYS 154 480 480 CYS CYS B . n B 2 155 ASN 155 481 481 ASN ASN B . n B 2 156 GLY 156 482 482 GLY GLY B . n B 2 157 VAL 157 483 483 VAL VAL B . n B 2 158 GLU 158 484 484 GLU GLU B . n B 2 159 GLY 159 485 485 GLY GLY B . n B 2 160 PHE 160 486 486 PHE PHE B . n B 2 161 ASN 161 487 487 ASN ASN B . n B 2 162 CYS 162 488 488 CYS CYS B . n B 2 163 TYR 163 489 489 TYR TYR B . n B 2 164 PHE 164 490 490 PHE PHE B . n B 2 165 PRO 165 491 491 PRO PRO B . n B 2 166 LEU 166 492 492 LEU LEU B . n B 2 167 GLN 167 493 493 GLN GLN B . n B 2 168 SER 168 494 494 SER SER B . n B 2 169 TYR 169 495 495 TYR TYR B . n B 2 170 GLY 170 496 496 GLY GLY B . n B 2 171 PHE 171 497 497 PHE PHE B . n B 2 172 GLN 172 498 498 GLN GLN B . n B 2 173 PRO 173 499 499 PRO PRO B . n B 2 174 THR 174 500 500 THR THR B . n B 2 175 ASN 175 501 501 ASN ASN B . n B 2 176 GLY 176 502 502 GLY GLY B . n B 2 177 VAL 177 503 503 VAL VAL B . n B 2 178 GLY 178 504 504 GLY GLY B . n B 2 179 TYR 179 505 505 TYR TYR B . n B 2 180 GLN 180 506 506 GLN GLN B . n B 2 181 PRO 181 507 507 PRO PRO B . n B 2 182 TYR 182 508 508 TYR TYR B . n B 2 183 ARG 183 509 509 ARG ARG B . n B 2 184 VAL 184 510 510 VAL VAL B . n B 2 185 VAL 185 511 511 VAL VAL B . n B 2 186 VAL 186 512 512 VAL VAL B . n B 2 187 LEU 187 513 513 LEU LEU B . n B 2 188 SER 188 514 514 SER SER B . n B 2 189 PHE 189 515 515 PHE PHE B . n B 2 190 GLU 190 516 516 GLU GLU B . n B 2 191 LEU 191 517 517 LEU LEU B . n B 2 192 LEU 192 518 518 LEU LEU B . n B 2 193 HIS 193 519 519 HIS HIS B . n B 2 194 ALA 194 520 520 ALA ALA B . n B 2 195 PRO 195 521 521 PRO PRO B . n B 2 196 ALA 196 522 522 ALA ALA B . n B 2 197 THR 197 523 523 THR THR B . n B 2 198 VAL 198 524 524 VAL VAL B . n B 2 199 CYS 199 525 525 CYS CYS B . n B 2 200 GLY 200 526 526 GLY GLY B . n B 2 201 PRO 201 527 527 PRO PRO B . n B 2 202 LYS 202 528 528 LYS LYS B . n B 2 203 LYS 203 529 529 LYS LYS B . n B 2 204 SER 204 530 530 SER SER B . n B 2 205 THR 205 531 531 THR THR B . n B 2 206 GLY 206 532 532 GLY GLY B . n B 2 207 THR 207 533 533 THR THR B . n B 2 208 LEU 208 534 534 LEU LEU B . n B 2 209 GLU 209 535 535 GLU GLU B . n B 2 210 VAL 210 536 536 VAL VAL B . n B 2 211 LEU 211 537 537 LEU LEU B . n B 2 212 PHE 212 538 538 PHE PHE B . n B 2 213 GLN 213 539 539 GLN GLN B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 FMT 1 601 601 FMT FMT A . E 4 FMT 1 602 701 FMT FMT A . F 5 GOL 1 603 801 GOL GOL A . G 6 ACT 1 604 1001 ACT ACT A . H 4 FMT 1 605 2 FMT FMT A . I 6 ACT 1 701 701 ACT ACT B . J 4 FMT 1 702 1701 FMT FMT B . K 4 FMT 1 703 1801 FMT FMT B . L 4 FMT 1 704 1901 FMT FMT B . M 4 FMT 1 705 2301 FMT FMT B . N 4 FMT 1 706 2601 FMT FMT B . O 5 GOL 1 707 2801 GOL GOL B . P 5 GOL 1 708 3001 GOL GOL B . Q 5 GOL 1 709 3101 GOL GOL B . R 4 FMT 1 710 3201 FMT FMT B . S 4 FMT 1 711 3401 FMT FMT B . T 5 GOL 1 712 3501 GOL GOL B . U 4 FMT 1 713 3 FMT FMT B . V 4 FMT 1 714 4 FMT FMT B . W 4 FMT 1 715 5 FMT FMT B . X 7 HOH 1 701 88 HOH HOH A . X 7 HOH 2 702 82 HOH HOH A . X 7 HOH 3 703 48 HOH HOH A . X 7 HOH 4 704 30 HOH HOH A . X 7 HOH 5 705 78 HOH HOH A . X 7 HOH 6 706 133 HOH HOH A . X 7 HOH 7 707 47 HOH HOH A . X 7 HOH 8 708 102 HOH HOH A . X 7 HOH 9 709 42 HOH HOH A . X 7 HOH 10 710 79 HOH HOH A . X 7 HOH 11 711 35 HOH HOH A . X 7 HOH 12 712 65 HOH HOH A . X 7 HOH 13 713 121 HOH HOH A . X 7 HOH 14 714 157 HOH HOH A . X 7 HOH 15 715 77 HOH HOH A . X 7 HOH 16 716 72 HOH HOH A . X 7 HOH 17 717 153 HOH HOH A . X 7 HOH 18 718 85 HOH HOH A . X 7 HOH 19 719 164 HOH HOH A . X 7 HOH 20 720 91 HOH HOH A . X 7 HOH 21 721 127 HOH HOH A . X 7 HOH 22 722 110 HOH HOH A . X 7 HOH 23 723 59 HOH HOH A . X 7 HOH 24 724 96 HOH HOH A . X 7 HOH 25 725 60 HOH HOH A . X 7 HOH 26 726 83 HOH HOH A . X 7 HOH 27 727 143 HOH HOH A . X 7 HOH 28 728 130 HOH HOH A . X 7 HOH 29 729 147 HOH HOH A . X 7 HOH 30 730 54 HOH HOH A . X 7 HOH 31 731 162 HOH HOH A . X 7 HOH 32 732 75 HOH HOH A . X 7 HOH 33 733 138 HOH HOH A . X 7 HOH 34 734 124 HOH HOH A . X 7 HOH 35 735 183 HOH HOH A . Y 7 HOH 1 801 6 HOH HOH B . Y 7 HOH 2 802 107 HOH HOH B . Y 7 HOH 3 803 98 HOH HOH B . Y 7 HOH 4 804 14 HOH HOH B . Y 7 HOH 5 805 22 HOH HOH B . Y 7 HOH 6 806 94 HOH HOH B . Y 7 HOH 7 807 178 HOH HOH B . Y 7 HOH 8 808 92 HOH HOH B . Y 7 HOH 9 809 117 HOH HOH B . Y 7 HOH 10 810 8 HOH HOH B . Y 7 HOH 11 811 25 HOH HOH B . Y 7 HOH 12 812 37 HOH HOH B . Y 7 HOH 13 813 185 HOH HOH B . Y 7 HOH 14 814 10 HOH HOH B . Y 7 HOH 15 815 7 HOH HOH B . Y 7 HOH 16 816 5 HOH HOH B . Y 7 HOH 17 817 173 HOH HOH B . Y 7 HOH 18 818 84 HOH HOH B . Y 7 HOH 19 819 115 HOH HOH B . Y 7 HOH 20 820 97 HOH HOH B . Y 7 HOH 21 821 29 HOH HOH B . Y 7 HOH 22 822 114 HOH HOH B . Y 7 HOH 23 823 9 HOH HOH B . Y 7 HOH 24 824 15 HOH HOH B . Y 7 HOH 25 825 34 HOH HOH B . Y 7 HOH 26 826 18 HOH HOH B . Y 7 HOH 27 827 180 HOH HOH B . Y 7 HOH 28 828 26 HOH HOH B . Y 7 HOH 29 829 27 HOH HOH B . Y 7 HOH 30 830 19 HOH HOH B . Y 7 HOH 31 831 45 HOH HOH B . Y 7 HOH 32 832 20 HOH HOH B . Y 7 HOH 33 833 1 HOH HOH B . Y 7 HOH 34 834 13 HOH HOH B . Y 7 HOH 35 835 3 HOH HOH B . Y 7 HOH 36 836 171 HOH HOH B . Y 7 HOH 37 837 67 HOH HOH B . Y 7 HOH 38 838 58 HOH HOH B . Y 7 HOH 39 839 126 HOH HOH B . Y 7 HOH 40 840 16 HOH HOH B . Y 7 HOH 41 841 4 HOH HOH B . Y 7 HOH 42 842 90 HOH HOH B . Y 7 HOH 43 843 64 HOH HOH B . Y 7 HOH 44 844 156 HOH HOH B . Y 7 HOH 45 845 86 HOH HOH B . Y 7 HOH 46 846 132 HOH HOH B . Y 7 HOH 47 847 52 HOH HOH B . Y 7 HOH 48 848 56 HOH HOH B . Y 7 HOH 49 849 2 HOH HOH B . Y 7 HOH 50 850 136 HOH HOH B . Y 7 HOH 51 851 51 HOH HOH B . Y 7 HOH 52 852 89 HOH HOH B . Y 7 HOH 53 853 28 HOH HOH B . Y 7 HOH 54 854 70 HOH HOH B . Y 7 HOH 55 855 53 HOH HOH B . Y 7 HOH 56 856 12 HOH HOH B . Y 7 HOH 57 857 160 HOH HOH B . Y 7 HOH 58 858 123 HOH HOH B . Y 7 HOH 59 859 41 HOH HOH B . Y 7 HOH 60 860 99 HOH HOH B . Y 7 HOH 61 861 168 HOH HOH B . Y 7 HOH 62 862 55 HOH HOH B . Y 7 HOH 63 863 43 HOH HOH B . Y 7 HOH 64 864 176 HOH HOH B . Y 7 HOH 65 865 103 HOH HOH B . Y 7 HOH 66 866 21 HOH HOH B . Y 7 HOH 67 867 175 HOH HOH B . Y 7 HOH 68 868 39 HOH HOH B . Y 7 HOH 69 869 23 HOH HOH B . Y 7 HOH 70 870 112 HOH HOH B . Y 7 HOH 71 871 66 HOH HOH B . Y 7 HOH 72 872 68 HOH HOH B . Y 7 HOH 73 873 87 HOH HOH B . Y 7 HOH 74 874 76 HOH HOH B . Y 7 HOH 75 875 142 HOH HOH B . Y 7 HOH 76 876 179 HOH HOH B . Y 7 HOH 77 877 44 HOH HOH B . Y 7 HOH 78 878 49 HOH HOH B . Y 7 HOH 79 879 63 HOH HOH B . Y 7 HOH 80 880 165 HOH HOH B . Y 7 HOH 81 881 74 HOH HOH B . Y 7 HOH 82 882 50 HOH HOH B . Y 7 HOH 83 883 169 HOH HOH B . Y 7 HOH 84 884 46 HOH HOH B . Y 7 HOH 85 885 31 HOH HOH B . Y 7 HOH 86 886 158 HOH HOH B . Y 7 HOH 87 887 71 HOH HOH B . Y 7 HOH 88 888 149 HOH HOH B . Y 7 HOH 89 889 33 HOH HOH B . Y 7 HOH 90 890 81 HOH HOH B . Y 7 HOH 91 891 36 HOH HOH B . Y 7 HOH 92 892 62 HOH HOH B . Y 7 HOH 93 893 80 HOH HOH B . Y 7 HOH 94 894 106 HOH HOH B . Y 7 HOH 95 895 32 HOH HOH B . Y 7 HOH 96 896 100 HOH HOH B . Y 7 HOH 97 897 181 HOH HOH B . Y 7 HOH 98 898 120 HOH HOH B . Y 7 HOH 99 899 17 HOH HOH B . Y 7 HOH 100 900 167 HOH HOH B . Y 7 HOH 101 901 101 HOH HOH B . Y 7 HOH 102 902 24 HOH HOH B . Y 7 HOH 103 903 159 HOH HOH B . Y 7 HOH 104 904 93 HOH HOH B . Y 7 HOH 105 905 139 HOH HOH B . Y 7 HOH 106 906 108 HOH HOH B . Y 7 HOH 107 907 128 HOH HOH B . Y 7 HOH 108 908 105 HOH HOH B . Y 7 HOH 109 909 150 HOH HOH B . Y 7 HOH 110 910 61 HOH HOH B . Y 7 HOH 111 911 184 HOH HOH B . Y 7 HOH 112 912 57 HOH HOH B . Y 7 HOH 113 913 40 HOH HOH B . Y 7 HOH 114 914 141 HOH HOH B . Y 7 HOH 115 915 166 HOH HOH B . Y 7 HOH 116 916 119 HOH HOH B . Y 7 HOH 117 917 95 HOH HOH B . Y 7 HOH 118 918 177 HOH HOH B . Y 7 HOH 119 919 129 HOH HOH B . Y 7 HOH 120 920 182 HOH HOH B . Y 7 HOH 121 921 122 HOH HOH B . Y 7 HOH 122 922 146 HOH HOH B . Y 7 HOH 123 923 170 HOH HOH B . Y 7 HOH 124 924 69 HOH HOH B . Y 7 HOH 125 925 118 HOH HOH B . Y 7 HOH 126 926 151 HOH HOH B . Y 7 HOH 127 927 148 HOH HOH B . Y 7 HOH 128 928 111 HOH HOH B . Y 7 HOH 129 929 172 HOH HOH B . Y 7 HOH 130 930 38 HOH HOH B . Y 7 HOH 131 931 104 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 8050 ? 1 MORE 2 ? 1 'SSA (A^2)' 15880 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-02-17 2 'Structure model' 1 1 2021-09-01 3 'Structure model' 1 2 2023-11-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' database_2 4 3 'Structure model' chem_comp_atom 5 3 'Structure model' chem_comp_bond 6 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 2 'Structure model' '_database_2.pdbx_DOI' 13 2 'Structure model' '_database_2.pdbx_database_accession' # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -y,x-y,z+1/3 3 -x+y,-x,z+2/3 4 x-y,-y,-z+2/3 5 -x,-x+y,-z+1/3 6 y,x,-z # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.17.1_3660 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_entry_details.entry_id 7D2Z _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO B 337 ? ? -91.36 46.79 2 1 ALA B 352 ? ? -107.87 42.71 3 1 ASN B 422 ? ? -123.19 -54.84 4 1 ASP B 428 ? ? -98.25 31.22 5 1 CYS B 525 ? ? -173.95 -173.33 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -3 ? A GLY 1 2 1 Y 1 A ALA 115 ? A ALA 119 3 1 Y 1 A GLY 116 ? A GLY 120 4 1 Y 1 A ARG 117 ? A ARG 121 5 1 Y 1 A ALA 118 ? A ALA 122 6 1 Y 1 A GLY 119 ? A GLY 123 7 1 Y 1 A GLU 120 ? A GLU 124 8 1 Y 1 A GLN 121 ? A GLN 125 9 1 Y 1 A LYS 122 ? A LYS 126 10 1 Y 1 A LEU 123 ? A LEU 127 11 1 Y 1 A ILE 124 ? A ILE 128 12 1 Y 1 A SER 125 ? A SER 129 13 1 Y 1 A GLU 126 ? A GLU 130 14 1 Y 1 A GLU 127 ? A GLU 131 15 1 Y 1 A ASP 128 ? A ASP 132 16 1 Y 1 A LEU 129 ? A LEU 133 17 1 Y 1 A ASN 130 ? A ASN 134 18 1 Y 1 A SER 131 ? A SER 135 19 1 Y 1 A ALA 132 ? A ALA 136 20 1 Y 1 A VAL 133 ? A VAL 137 21 1 Y 1 A ASP 134 ? A ASP 138 22 1 Y 1 A HIS 135 ? A HIS 139 23 1 Y 1 A HIS 136 ? A HIS 140 24 1 Y 1 A HIS 137 ? A HIS 141 25 1 Y 1 A HIS 138 ? A HIS 142 26 1 Y 1 A HIS 139 ? A HIS 143 27 1 Y 1 A HIS 140 ? A HIS 144 28 1 Y 1 B ALA 327 ? B ALA 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACT C C N N 1 ACT O O N N 2 ACT OXT O N N 3 ACT CH3 C N N 4 ACT H1 H N N 5 ACT H2 H N N 6 ACT H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ARG N N N N 21 ARG CA C N S 22 ARG C C N N 23 ARG O O N N 24 ARG CB C N N 25 ARG CG C N N 26 ARG CD C N N 27 ARG NE N N N 28 ARG CZ C N N 29 ARG NH1 N N N 30 ARG NH2 N N N 31 ARG OXT O N N 32 ARG H H N N 33 ARG H2 H N N 34 ARG HA H N N 35 ARG HB2 H N N 36 ARG HB3 H N N 37 ARG HG2 H N N 38 ARG HG3 H N N 39 ARG HD2 H N N 40 ARG HD3 H N N 41 ARG HE H N N 42 ARG HH11 H N N 43 ARG HH12 H N N 44 ARG HH21 H N N 45 ARG HH22 H N N 46 ARG HXT H N N 47 ASN N N N N 48 ASN CA C N S 49 ASN C C N N 50 ASN O O N N 51 ASN CB C N N 52 ASN CG C N N 53 ASN OD1 O N N 54 ASN ND2 N N N 55 ASN OXT O N N 56 ASN H H N N 57 ASN H2 H N N 58 ASN HA H N N 59 ASN HB2 H N N 60 ASN HB3 H N N 61 ASN HD21 H N N 62 ASN HD22 H N N 63 ASN HXT H N N 64 ASP N N N N 65 ASP CA C N S 66 ASP C C N N 67 ASP O O N N 68 ASP CB C N N 69 ASP CG C N N 70 ASP OD1 O N N 71 ASP OD2 O N N 72 ASP OXT O N N 73 ASP H H N N 74 ASP H2 H N N 75 ASP HA H N N 76 ASP HB2 H N N 77 ASP HB3 H N N 78 ASP HD2 H N N 79 ASP HXT H N N 80 BMA C1 C N R 81 BMA C2 C N S 82 BMA C3 C N S 83 BMA C4 C N S 84 BMA C5 C N R 85 BMA C6 C N N 86 BMA O1 O N N 87 BMA O2 O N N 88 BMA O3 O N N 89 BMA O4 O N N 90 BMA O5 O N N 91 BMA O6 O N N 92 BMA H1 H N N 93 BMA H2 H N N 94 BMA H3 H N N 95 BMA H4 H N N 96 BMA H5 H N N 97 BMA H61 H N N 98 BMA H62 H N N 99 BMA HO1 H N N 100 BMA HO2 H N N 101 BMA HO3 H N N 102 BMA HO4 H N N 103 BMA HO6 H N N 104 CYS N N N N 105 CYS CA C N R 106 CYS C C N N 107 CYS O O N N 108 CYS CB C N N 109 CYS SG S N N 110 CYS OXT O N N 111 CYS H H N N 112 CYS H2 H N N 113 CYS HA H N N 114 CYS HB2 H N N 115 CYS HB3 H N N 116 CYS HG H N N 117 CYS HXT H N N 118 FMT C C N N 119 FMT O1 O N N 120 FMT O2 O N N 121 FMT H H N N 122 FMT HO2 H N N 123 FUC C1 C N R 124 FUC C2 C N S 125 FUC C3 C N R 126 FUC C4 C N S 127 FUC C5 C N S 128 FUC C6 C N N 129 FUC O1 O N N 130 FUC O2 O N N 131 FUC O3 O N N 132 FUC O4 O N N 133 FUC O5 O N N 134 FUC H1 H N N 135 FUC H2 H N N 136 FUC H3 H N N 137 FUC H4 H N N 138 FUC H5 H N N 139 FUC H61 H N N 140 FUC H62 H N N 141 FUC H63 H N N 142 FUC HO1 H N N 143 FUC HO2 H N N 144 FUC HO3 H N N 145 FUC HO4 H N N 146 GLN N N N N 147 GLN CA C N S 148 GLN C C N N 149 GLN O O N N 150 GLN CB C N N 151 GLN CG C N N 152 GLN CD C N N 153 GLN OE1 O N N 154 GLN NE2 N N N 155 GLN OXT O N N 156 GLN H H N N 157 GLN H2 H N N 158 GLN HA H N N 159 GLN HB2 H N N 160 GLN HB3 H N N 161 GLN HG2 H N N 162 GLN HG3 H N N 163 GLN HE21 H N N 164 GLN HE22 H N N 165 GLN HXT H N N 166 GLU N N N N 167 GLU CA C N S 168 GLU C C N N 169 GLU O O N N 170 GLU CB C N N 171 GLU CG C N N 172 GLU CD C N N 173 GLU OE1 O N N 174 GLU OE2 O N N 175 GLU OXT O N N 176 GLU H H N N 177 GLU H2 H N N 178 GLU HA H N N 179 GLU HB2 H N N 180 GLU HB3 H N N 181 GLU HG2 H N N 182 GLU HG3 H N N 183 GLU HE2 H N N 184 GLU HXT H N N 185 GLY N N N N 186 GLY CA C N N 187 GLY C C N N 188 GLY O O N N 189 GLY OXT O N N 190 GLY H H N N 191 GLY H2 H N N 192 GLY HA2 H N N 193 GLY HA3 H N N 194 GLY HXT H N N 195 GOL C1 C N N 196 GOL O1 O N N 197 GOL C2 C N N 198 GOL O2 O N N 199 GOL C3 C N N 200 GOL O3 O N N 201 GOL H11 H N N 202 GOL H12 H N N 203 GOL HO1 H N N 204 GOL H2 H N N 205 GOL HO2 H N N 206 GOL H31 H N N 207 GOL H32 H N N 208 GOL HO3 H N N 209 HIS N N N N 210 HIS CA C N S 211 HIS C C N N 212 HIS O O N N 213 HIS CB C N N 214 HIS CG C Y N 215 HIS ND1 N Y N 216 HIS CD2 C Y N 217 HIS CE1 C Y N 218 HIS NE2 N Y N 219 HIS OXT O N N 220 HIS H H N N 221 HIS H2 H N N 222 HIS HA H N N 223 HIS HB2 H N N 224 HIS HB3 H N N 225 HIS HD1 H N N 226 HIS HD2 H N N 227 HIS HE1 H N N 228 HIS HE2 H N N 229 HIS HXT H N N 230 HOH O O N N 231 HOH H1 H N N 232 HOH H2 H N N 233 ILE N N N N 234 ILE CA C N S 235 ILE C C N N 236 ILE O O N N 237 ILE CB C N S 238 ILE CG1 C N N 239 ILE CG2 C N N 240 ILE CD1 C N N 241 ILE OXT O N N 242 ILE H H N N 243 ILE H2 H N N 244 ILE HA H N N 245 ILE HB H N N 246 ILE HG12 H N N 247 ILE HG13 H N N 248 ILE HG21 H N N 249 ILE HG22 H N N 250 ILE HG23 H N N 251 ILE HD11 H N N 252 ILE HD12 H N N 253 ILE HD13 H N N 254 ILE HXT H N N 255 LEU N N N N 256 LEU CA C N S 257 LEU C C N N 258 LEU O O N N 259 LEU CB C N N 260 LEU CG C N N 261 LEU CD1 C N N 262 LEU CD2 C N N 263 LEU OXT O N N 264 LEU H H N N 265 LEU H2 H N N 266 LEU HA H N N 267 LEU HB2 H N N 268 LEU HB3 H N N 269 LEU HG H N N 270 LEU HD11 H N N 271 LEU HD12 H N N 272 LEU HD13 H N N 273 LEU HD21 H N N 274 LEU HD22 H N N 275 LEU HD23 H N N 276 LEU HXT H N N 277 LYS N N N N 278 LYS CA C N S 279 LYS C C N N 280 LYS O O N N 281 LYS CB C N N 282 LYS CG C N N 283 LYS CD C N N 284 LYS CE C N N 285 LYS NZ N N N 286 LYS OXT O N N 287 LYS H H N N 288 LYS H2 H N N 289 LYS HA H N N 290 LYS HB2 H N N 291 LYS HB3 H N N 292 LYS HG2 H N N 293 LYS HG3 H N N 294 LYS HD2 H N N 295 LYS HD3 H N N 296 LYS HE2 H N N 297 LYS HE3 H N N 298 LYS HZ1 H N N 299 LYS HZ2 H N N 300 LYS HZ3 H N N 301 LYS HXT H N N 302 MAN C1 C N S 303 MAN C2 C N S 304 MAN C3 C N S 305 MAN C4 C N S 306 MAN C5 C N R 307 MAN C6 C N N 308 MAN O1 O N N 309 MAN O2 O N N 310 MAN O3 O N N 311 MAN O4 O N N 312 MAN O5 O N N 313 MAN O6 O N N 314 MAN H1 H N N 315 MAN H2 H N N 316 MAN H3 H N N 317 MAN H4 H N N 318 MAN H5 H N N 319 MAN H61 H N N 320 MAN H62 H N N 321 MAN HO1 H N N 322 MAN HO2 H N N 323 MAN HO3 H N N 324 MAN HO4 H N N 325 MAN HO6 H N N 326 MET N N N N 327 MET CA C N S 328 MET C C N N 329 MET O O N N 330 MET CB C N N 331 MET CG C N N 332 MET SD S N N 333 MET CE C N N 334 MET OXT O N N 335 MET H H N N 336 MET H2 H N N 337 MET HA H N N 338 MET HB2 H N N 339 MET HB3 H N N 340 MET HG2 H N N 341 MET HG3 H N N 342 MET HE1 H N N 343 MET HE2 H N N 344 MET HE3 H N N 345 MET HXT H N N 346 NAG C1 C N R 347 NAG C2 C N R 348 NAG C3 C N R 349 NAG C4 C N S 350 NAG C5 C N R 351 NAG C6 C N N 352 NAG C7 C N N 353 NAG C8 C N N 354 NAG N2 N N N 355 NAG O1 O N N 356 NAG O3 O N N 357 NAG O4 O N N 358 NAG O5 O N N 359 NAG O6 O N N 360 NAG O7 O N N 361 NAG H1 H N N 362 NAG H2 H N N 363 NAG H3 H N N 364 NAG H4 H N N 365 NAG H5 H N N 366 NAG H61 H N N 367 NAG H62 H N N 368 NAG H81 H N N 369 NAG H82 H N N 370 NAG H83 H N N 371 NAG HN2 H N N 372 NAG HO1 H N N 373 NAG HO3 H N N 374 NAG HO4 H N N 375 NAG HO6 H N N 376 PHE N N N N 377 PHE CA C N S 378 PHE C C N N 379 PHE O O N N 380 PHE CB C N N 381 PHE CG C Y N 382 PHE CD1 C Y N 383 PHE CD2 C Y N 384 PHE CE1 C Y N 385 PHE CE2 C Y N 386 PHE CZ C Y N 387 PHE OXT O N N 388 PHE H H N N 389 PHE H2 H N N 390 PHE HA H N N 391 PHE HB2 H N N 392 PHE HB3 H N N 393 PHE HD1 H N N 394 PHE HD2 H N N 395 PHE HE1 H N N 396 PHE HE2 H N N 397 PHE HZ H N N 398 PHE HXT H N N 399 PRO N N N N 400 PRO CA C N S 401 PRO C C N N 402 PRO O O N N 403 PRO CB C N N 404 PRO CG C N N 405 PRO CD C N N 406 PRO OXT O N N 407 PRO H H N N 408 PRO HA H N N 409 PRO HB2 H N N 410 PRO HB3 H N N 411 PRO HG2 H N N 412 PRO HG3 H N N 413 PRO HD2 H N N 414 PRO HD3 H N N 415 PRO HXT H N N 416 SER N N N N 417 SER CA C N S 418 SER C C N N 419 SER O O N N 420 SER CB C N N 421 SER OG O N N 422 SER OXT O N N 423 SER H H N N 424 SER H2 H N N 425 SER HA H N N 426 SER HB2 H N N 427 SER HB3 H N N 428 SER HG H N N 429 SER HXT H N N 430 THR N N N N 431 THR CA C N S 432 THR C C N N 433 THR O O N N 434 THR CB C N R 435 THR OG1 O N N 436 THR CG2 C N N 437 THR OXT O N N 438 THR H H N N 439 THR H2 H N N 440 THR HA H N N 441 THR HB H N N 442 THR HG1 H N N 443 THR HG21 H N N 444 THR HG22 H N N 445 THR HG23 H N N 446 THR HXT H N N 447 TRP N N N N 448 TRP CA C N S 449 TRP C C N N 450 TRP O O N N 451 TRP CB C N N 452 TRP CG C Y N 453 TRP CD1 C Y N 454 TRP CD2 C Y N 455 TRP NE1 N Y N 456 TRP CE2 C Y N 457 TRP CE3 C Y N 458 TRP CZ2 C Y N 459 TRP CZ3 C Y N 460 TRP CH2 C Y N 461 TRP OXT O N N 462 TRP H H N N 463 TRP H2 H N N 464 TRP HA H N N 465 TRP HB2 H N N 466 TRP HB3 H N N 467 TRP HD1 H N N 468 TRP HE1 H N N 469 TRP HE3 H N N 470 TRP HZ2 H N N 471 TRP HZ3 H N N 472 TRP HH2 H N N 473 TRP HXT H N N 474 TYR N N N N 475 TYR CA C N S 476 TYR C C N N 477 TYR O O N N 478 TYR CB C N N 479 TYR CG C Y N 480 TYR CD1 C Y N 481 TYR CD2 C Y N 482 TYR CE1 C Y N 483 TYR CE2 C Y N 484 TYR CZ C Y N 485 TYR OH O N N 486 TYR OXT O N N 487 TYR H H N N 488 TYR H2 H N N 489 TYR HA H N N 490 TYR HB2 H N N 491 TYR HB3 H N N 492 TYR HD1 H N N 493 TYR HD2 H N N 494 TYR HE1 H N N 495 TYR HE2 H N N 496 TYR HH H N N 497 TYR HXT H N N 498 VAL N N N N 499 VAL CA C N S 500 VAL C C N N 501 VAL O O N N 502 VAL CB C N N 503 VAL CG1 C N N 504 VAL CG2 C N N 505 VAL OXT O N N 506 VAL H H N N 507 VAL H2 H N N 508 VAL HA H N N 509 VAL HB H N N 510 VAL HG11 H N N 511 VAL HG12 H N N 512 VAL HG13 H N N 513 VAL HG21 H N N 514 VAL HG22 H N N 515 VAL HG23 H N N 516 VAL HXT H N N 517 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACT C O doub N N 1 ACT C OXT sing N N 2 ACT C CH3 sing N N 3 ACT CH3 H1 sing N N 4 ACT CH3 H2 sing N N 5 ACT CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ARG N CA sing N N 19 ARG N H sing N N 20 ARG N H2 sing N N 21 ARG CA C sing N N 22 ARG CA CB sing N N 23 ARG CA HA sing N N 24 ARG C O doub N N 25 ARG C OXT sing N N 26 ARG CB CG sing N N 27 ARG CB HB2 sing N N 28 ARG CB HB3 sing N N 29 ARG CG CD sing N N 30 ARG CG HG2 sing N N 31 ARG CG HG3 sing N N 32 ARG CD NE sing N N 33 ARG CD HD2 sing N N 34 ARG CD HD3 sing N N 35 ARG NE CZ sing N N 36 ARG NE HE sing N N 37 ARG CZ NH1 sing N N 38 ARG CZ NH2 doub N N 39 ARG NH1 HH11 sing N N 40 ARG NH1 HH12 sing N N 41 ARG NH2 HH21 sing N N 42 ARG NH2 HH22 sing N N 43 ARG OXT HXT sing N N 44 ASN N CA sing N N 45 ASN N H sing N N 46 ASN N H2 sing N N 47 ASN CA C sing N N 48 ASN CA CB sing N N 49 ASN CA HA sing N N 50 ASN C O doub N N 51 ASN C OXT sing N N 52 ASN CB CG sing N N 53 ASN CB HB2 sing N N 54 ASN CB HB3 sing N N 55 ASN CG OD1 doub N N 56 ASN CG ND2 sing N N 57 ASN ND2 HD21 sing N N 58 ASN ND2 HD22 sing N N 59 ASN OXT HXT sing N N 60 ASP N CA sing N N 61 ASP N H sing N N 62 ASP N H2 sing N N 63 ASP CA C sing N N 64 ASP CA CB sing N N 65 ASP CA HA sing N N 66 ASP C O doub N N 67 ASP C OXT sing N N 68 ASP CB CG sing N N 69 ASP CB HB2 sing N N 70 ASP CB HB3 sing N N 71 ASP CG OD1 doub N N 72 ASP CG OD2 sing N N 73 ASP OD2 HD2 sing N N 74 ASP OXT HXT sing N N 75 BMA C1 C2 sing N N 76 BMA C1 O1 sing N N 77 BMA C1 O5 sing N N 78 BMA C1 H1 sing N N 79 BMA C2 C3 sing N N 80 BMA C2 O2 sing N N 81 BMA C2 H2 sing N N 82 BMA C3 C4 sing N N 83 BMA C3 O3 sing N N 84 BMA C3 H3 sing N N 85 BMA C4 C5 sing N N 86 BMA C4 O4 sing N N 87 BMA C4 H4 sing N N 88 BMA C5 C6 sing N N 89 BMA C5 O5 sing N N 90 BMA C5 H5 sing N N 91 BMA C6 O6 sing N N 92 BMA C6 H61 sing N N 93 BMA C6 H62 sing N N 94 BMA O1 HO1 sing N N 95 BMA O2 HO2 sing N N 96 BMA O3 HO3 sing N N 97 BMA O4 HO4 sing N N 98 BMA O6 HO6 sing N N 99 CYS N CA sing N N 100 CYS N H sing N N 101 CYS N H2 sing N N 102 CYS CA C sing N N 103 CYS CA CB sing N N 104 CYS CA HA sing N N 105 CYS C O doub N N 106 CYS C OXT sing N N 107 CYS CB SG sing N N 108 CYS CB HB2 sing N N 109 CYS CB HB3 sing N N 110 CYS SG HG sing N N 111 CYS OXT HXT sing N N 112 FMT C O1 doub N N 113 FMT C O2 sing N N 114 FMT C H sing N N 115 FMT O2 HO2 sing N N 116 FUC C1 C2 sing N N 117 FUC C1 O1 sing N N 118 FUC C1 O5 sing N N 119 FUC C1 H1 sing N N 120 FUC C2 C3 sing N N 121 FUC C2 O2 sing N N 122 FUC C2 H2 sing N N 123 FUC C3 C4 sing N N 124 FUC C3 O3 sing N N 125 FUC C3 H3 sing N N 126 FUC C4 C5 sing N N 127 FUC C4 O4 sing N N 128 FUC C4 H4 sing N N 129 FUC C5 C6 sing N N 130 FUC C5 O5 sing N N 131 FUC C5 H5 sing N N 132 FUC C6 H61 sing N N 133 FUC C6 H62 sing N N 134 FUC C6 H63 sing N N 135 FUC O1 HO1 sing N N 136 FUC O2 HO2 sing N N 137 FUC O3 HO3 sing N N 138 FUC O4 HO4 sing N N 139 GLN N CA sing N N 140 GLN N H sing N N 141 GLN N H2 sing N N 142 GLN CA C sing N N 143 GLN CA CB sing N N 144 GLN CA HA sing N N 145 GLN C O doub N N 146 GLN C OXT sing N N 147 GLN CB CG sing N N 148 GLN CB HB2 sing N N 149 GLN CB HB3 sing N N 150 GLN CG CD sing N N 151 GLN CG HG2 sing N N 152 GLN CG HG3 sing N N 153 GLN CD OE1 doub N N 154 GLN CD NE2 sing N N 155 GLN NE2 HE21 sing N N 156 GLN NE2 HE22 sing N N 157 GLN OXT HXT sing N N 158 GLU N CA sing N N 159 GLU N H sing N N 160 GLU N H2 sing N N 161 GLU CA C sing N N 162 GLU CA CB sing N N 163 GLU CA HA sing N N 164 GLU C O doub N N 165 GLU C OXT sing N N 166 GLU CB CG sing N N 167 GLU CB HB2 sing N N 168 GLU CB HB3 sing N N 169 GLU CG CD sing N N 170 GLU CG HG2 sing N N 171 GLU CG HG3 sing N N 172 GLU CD OE1 doub N N 173 GLU CD OE2 sing N N 174 GLU OE2 HE2 sing N N 175 GLU OXT HXT sing N N 176 GLY N CA sing N N 177 GLY N H sing N N 178 GLY N H2 sing N N 179 GLY CA C sing N N 180 GLY CA HA2 sing N N 181 GLY CA HA3 sing N N 182 GLY C O doub N N 183 GLY C OXT sing N N 184 GLY OXT HXT sing N N 185 GOL C1 O1 sing N N 186 GOL C1 C2 sing N N 187 GOL C1 H11 sing N N 188 GOL C1 H12 sing N N 189 GOL O1 HO1 sing N N 190 GOL C2 O2 sing N N 191 GOL C2 C3 sing N N 192 GOL C2 H2 sing N N 193 GOL O2 HO2 sing N N 194 GOL C3 O3 sing N N 195 GOL C3 H31 sing N N 196 GOL C3 H32 sing N N 197 GOL O3 HO3 sing N N 198 HIS N CA sing N N 199 HIS N H sing N N 200 HIS N H2 sing N N 201 HIS CA C sing N N 202 HIS CA CB sing N N 203 HIS CA HA sing N N 204 HIS C O doub N N 205 HIS C OXT sing N N 206 HIS CB CG sing N N 207 HIS CB HB2 sing N N 208 HIS CB HB3 sing N N 209 HIS CG ND1 sing Y N 210 HIS CG CD2 doub Y N 211 HIS ND1 CE1 doub Y N 212 HIS ND1 HD1 sing N N 213 HIS CD2 NE2 sing Y N 214 HIS CD2 HD2 sing N N 215 HIS CE1 NE2 sing Y N 216 HIS CE1 HE1 sing N N 217 HIS NE2 HE2 sing N N 218 HIS OXT HXT sing N N 219 HOH O H1 sing N N 220 HOH O H2 sing N N 221 ILE N CA sing N N 222 ILE N H sing N N 223 ILE N H2 sing N N 224 ILE CA C sing N N 225 ILE CA CB sing N N 226 ILE CA HA sing N N 227 ILE C O doub N N 228 ILE C OXT sing N N 229 ILE CB CG1 sing N N 230 ILE CB CG2 sing N N 231 ILE CB HB sing N N 232 ILE CG1 CD1 sing N N 233 ILE CG1 HG12 sing N N 234 ILE CG1 HG13 sing N N 235 ILE CG2 HG21 sing N N 236 ILE CG2 HG22 sing N N 237 ILE CG2 HG23 sing N N 238 ILE CD1 HD11 sing N N 239 ILE CD1 HD12 sing N N 240 ILE CD1 HD13 sing N N 241 ILE OXT HXT sing N N 242 LEU N CA sing N N 243 LEU N H sing N N 244 LEU N H2 sing N N 245 LEU CA C sing N N 246 LEU CA CB sing N N 247 LEU CA HA sing N N 248 LEU C O doub N N 249 LEU C OXT sing N N 250 LEU CB CG sing N N 251 LEU CB HB2 sing N N 252 LEU CB HB3 sing N N 253 LEU CG CD1 sing N N 254 LEU CG CD2 sing N N 255 LEU CG HG sing N N 256 LEU CD1 HD11 sing N N 257 LEU CD1 HD12 sing N N 258 LEU CD1 HD13 sing N N 259 LEU CD2 HD21 sing N N 260 LEU CD2 HD22 sing N N 261 LEU CD2 HD23 sing N N 262 LEU OXT HXT sing N N 263 LYS N CA sing N N 264 LYS N H sing N N 265 LYS N H2 sing N N 266 LYS CA C sing N N 267 LYS CA CB sing N N 268 LYS CA HA sing N N 269 LYS C O doub N N 270 LYS C OXT sing N N 271 LYS CB CG sing N N 272 LYS CB HB2 sing N N 273 LYS CB HB3 sing N N 274 LYS CG CD sing N N 275 LYS CG HG2 sing N N 276 LYS CG HG3 sing N N 277 LYS CD CE sing N N 278 LYS CD HD2 sing N N 279 LYS CD HD3 sing N N 280 LYS CE NZ sing N N 281 LYS CE HE2 sing N N 282 LYS CE HE3 sing N N 283 LYS NZ HZ1 sing N N 284 LYS NZ HZ2 sing N N 285 LYS NZ HZ3 sing N N 286 LYS OXT HXT sing N N 287 MAN C1 C2 sing N N 288 MAN C1 O1 sing N N 289 MAN C1 O5 sing N N 290 MAN C1 H1 sing N N 291 MAN C2 C3 sing N N 292 MAN C2 O2 sing N N 293 MAN C2 H2 sing N N 294 MAN C3 C4 sing N N 295 MAN C3 O3 sing N N 296 MAN C3 H3 sing N N 297 MAN C4 C5 sing N N 298 MAN C4 O4 sing N N 299 MAN C4 H4 sing N N 300 MAN C5 C6 sing N N 301 MAN C5 O5 sing N N 302 MAN C5 H5 sing N N 303 MAN C6 O6 sing N N 304 MAN C6 H61 sing N N 305 MAN C6 H62 sing N N 306 MAN O1 HO1 sing N N 307 MAN O2 HO2 sing N N 308 MAN O3 HO3 sing N N 309 MAN O4 HO4 sing N N 310 MAN O6 HO6 sing N N 311 MET N CA sing N N 312 MET N H sing N N 313 MET N H2 sing N N 314 MET CA C sing N N 315 MET CA CB sing N N 316 MET CA HA sing N N 317 MET C O doub N N 318 MET C OXT sing N N 319 MET CB CG sing N N 320 MET CB HB2 sing N N 321 MET CB HB3 sing N N 322 MET CG SD sing N N 323 MET CG HG2 sing N N 324 MET CG HG3 sing N N 325 MET SD CE sing N N 326 MET CE HE1 sing N N 327 MET CE HE2 sing N N 328 MET CE HE3 sing N N 329 MET OXT HXT sing N N 330 NAG C1 C2 sing N N 331 NAG C1 O1 sing N N 332 NAG C1 O5 sing N N 333 NAG C1 H1 sing N N 334 NAG C2 C3 sing N N 335 NAG C2 N2 sing N N 336 NAG C2 H2 sing N N 337 NAG C3 C4 sing N N 338 NAG C3 O3 sing N N 339 NAG C3 H3 sing N N 340 NAG C4 C5 sing N N 341 NAG C4 O4 sing N N 342 NAG C4 H4 sing N N 343 NAG C5 C6 sing N N 344 NAG C5 O5 sing N N 345 NAG C5 H5 sing N N 346 NAG C6 O6 sing N N 347 NAG C6 H61 sing N N 348 NAG C6 H62 sing N N 349 NAG C7 C8 sing N N 350 NAG C7 N2 sing N N 351 NAG C7 O7 doub N N 352 NAG C8 H81 sing N N 353 NAG C8 H82 sing N N 354 NAG C8 H83 sing N N 355 NAG N2 HN2 sing N N 356 NAG O1 HO1 sing N N 357 NAG O3 HO3 sing N N 358 NAG O4 HO4 sing N N 359 NAG O6 HO6 sing N N 360 PHE N CA sing N N 361 PHE N H sing N N 362 PHE N H2 sing N N 363 PHE CA C sing N N 364 PHE CA CB sing N N 365 PHE CA HA sing N N 366 PHE C O doub N N 367 PHE C OXT sing N N 368 PHE CB CG sing N N 369 PHE CB HB2 sing N N 370 PHE CB HB3 sing N N 371 PHE CG CD1 doub Y N 372 PHE CG CD2 sing Y N 373 PHE CD1 CE1 sing Y N 374 PHE CD1 HD1 sing N N 375 PHE CD2 CE2 doub Y N 376 PHE CD2 HD2 sing N N 377 PHE CE1 CZ doub Y N 378 PHE CE1 HE1 sing N N 379 PHE CE2 CZ sing Y N 380 PHE CE2 HE2 sing N N 381 PHE CZ HZ sing N N 382 PHE OXT HXT sing N N 383 PRO N CA sing N N 384 PRO N CD sing N N 385 PRO N H sing N N 386 PRO CA C sing N N 387 PRO CA CB sing N N 388 PRO CA HA sing N N 389 PRO C O doub N N 390 PRO C OXT sing N N 391 PRO CB CG sing N N 392 PRO CB HB2 sing N N 393 PRO CB HB3 sing N N 394 PRO CG CD sing N N 395 PRO CG HG2 sing N N 396 PRO CG HG3 sing N N 397 PRO CD HD2 sing N N 398 PRO CD HD3 sing N N 399 PRO OXT HXT sing N N 400 SER N CA sing N N 401 SER N H sing N N 402 SER N H2 sing N N 403 SER CA C sing N N 404 SER CA CB sing N N 405 SER CA HA sing N N 406 SER C O doub N N 407 SER C OXT sing N N 408 SER CB OG sing N N 409 SER CB HB2 sing N N 410 SER CB HB3 sing N N 411 SER OG HG sing N N 412 SER OXT HXT sing N N 413 THR N CA sing N N 414 THR N H sing N N 415 THR N H2 sing N N 416 THR CA C sing N N 417 THR CA CB sing N N 418 THR CA HA sing N N 419 THR C O doub N N 420 THR C OXT sing N N 421 THR CB OG1 sing N N 422 THR CB CG2 sing N N 423 THR CB HB sing N N 424 THR OG1 HG1 sing N N 425 THR CG2 HG21 sing N N 426 THR CG2 HG22 sing N N 427 THR CG2 HG23 sing N N 428 THR OXT HXT sing N N 429 TRP N CA sing N N 430 TRP N H sing N N 431 TRP N H2 sing N N 432 TRP CA C sing N N 433 TRP CA CB sing N N 434 TRP CA HA sing N N 435 TRP C O doub N N 436 TRP C OXT sing N N 437 TRP CB CG sing N N 438 TRP CB HB2 sing N N 439 TRP CB HB3 sing N N 440 TRP CG CD1 doub Y N 441 TRP CG CD2 sing Y N 442 TRP CD1 NE1 sing Y N 443 TRP CD1 HD1 sing N N 444 TRP CD2 CE2 doub Y N 445 TRP CD2 CE3 sing Y N 446 TRP NE1 CE2 sing Y N 447 TRP NE1 HE1 sing N N 448 TRP CE2 CZ2 sing Y N 449 TRP CE3 CZ3 doub Y N 450 TRP CE3 HE3 sing N N 451 TRP CZ2 CH2 doub Y N 452 TRP CZ2 HZ2 sing N N 453 TRP CZ3 CH2 sing Y N 454 TRP CZ3 HZ3 sing N N 455 TRP CH2 HH2 sing N N 456 TRP OXT HXT sing N N 457 TYR N CA sing N N 458 TYR N H sing N N 459 TYR N H2 sing N N 460 TYR CA C sing N N 461 TYR CA CB sing N N 462 TYR CA HA sing N N 463 TYR C O doub N N 464 TYR C OXT sing N N 465 TYR CB CG sing N N 466 TYR CB HB2 sing N N 467 TYR CB HB3 sing N N 468 TYR CG CD1 doub Y N 469 TYR CG CD2 sing Y N 470 TYR CD1 CE1 sing Y N 471 TYR CD1 HD1 sing N N 472 TYR CD2 CE2 doub Y N 473 TYR CD2 HD2 sing N N 474 TYR CE1 CZ doub Y N 475 TYR CE1 HE1 sing N N 476 TYR CE2 CZ sing Y N 477 TYR CE2 HE2 sing N N 478 TYR CZ OH sing N N 479 TYR OH HH sing N N 480 TYR OXT HXT sing N N 481 VAL N CA sing N N 482 VAL N H sing N N 483 VAL N H2 sing N N 484 VAL CA C sing N N 485 VAL CA CB sing N N 486 VAL CA HA sing N N 487 VAL C O doub N N 488 VAL C OXT sing N N 489 VAL CB CG1 sing N N 490 VAL CB CG2 sing N N 491 VAL CB HB sing N N 492 VAL CG1 HG11 sing N N 493 VAL CG1 HG12 sing N N 494 VAL CG1 HG13 sing N N 495 VAL CG2 HG21 sing N N 496 VAL CG2 HG22 sing N N 497 VAL CG2 HG23 sing N N 498 VAL OXT HXT sing N N 499 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Chinese Academy of Sciences' China 'QYZDB-SSW-SMC037, XDB37020204' 1 'National Science Foundation (NSF, China)' China 31870726 2 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 3 NAG 1 C NAG 1 B NAG 3102 n C 3 NAG 2 C NAG 2 B NAG 3105 n C 3 BMA 3 C BMA 3 B BMA 3106 n C 3 MAN 4 C MAN 4 B MAN 3108 n C 3 MAN 5 C MAN 5 B MAN 3107 n C 3 FUC 6 C FUC 6 B FUC 3103 n C 3 FUC 7 C FUC 7 B FUC 3104 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 3 'DManpa1-3[DManpa1-6]DManpb1-4DGlcpNAcb1-4[LFucpa1-3][LFucpa1-6]DGlcpNAcb1-ROH' 'Glycam Condensed Sequence' GMML 1.0 2 3 ;WURCS=2.0/4,7,6/[a2122h-1b_1-5_2*NCC/3=O][a1221m-1a_1-5][a1122h-1b_1-5][a1122h-1a_1-5]/1-2-1-3-4-4-2/a3-b1_a4-c1_a6-g1_c4-d1_d3-e1_d6-f1 ; WURCS PDB2Glycan 1.1.0 3 3 ;[][D-1-deoxy-GlcpNAc]{[(3+1)][a-L-Fucp]{}[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{}[(6+1)][a-D-Manp]{}}}[(6+1)][a-L-Fucp]{}} ; LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 3 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 3 3 BMA C1 O1 2 NAG O4 HO4 sing ? 3 3 4 MAN C1 O1 3 BMA O3 HO3 sing ? 4 3 5 MAN C1 O1 3 BMA O6 HO6 sing ? 5 3 6 FUC C1 O1 1 NAG O3 HO3 sing ? 6 3 7 FUC C1 O1 1 NAG O6 HO6 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 3 NAG 1 n 3 NAG 2 n 3 BMA 3 n 3 MAN 4 n 3 MAN 5 n 3 FUC 6 n 3 FUC 7 n # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 BMA ? ? BMA ? ? 'SUBJECT OF INVESTIGATION' ? 2 FUC ? ? FUC ? ? 'SUBJECT OF INVESTIGATION' ? 3 MAN ? ? MAN ? ? 'SUBJECT OF INVESTIGATION' ? 4 NAG ? ? NAG ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'FORMIC ACID' FMT 5 GLYCEROL GOL 6 'ACETATE ION' ACT 7 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6M0J _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'isothermal titration calorimetry' _pdbx_struct_assembly_auth_evidence.details ? # _space_group.name_H-M_alt 'P 31 2 1' _space_group.name_Hall ;P 31 2" ; _space_group.IT_number 152 _space_group.crystal_system trigonal _space_group.id 1 #