data_7D7P # _entry.id 7D7P # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7D7P pdb_00007d7p 10.2210/pdb7d7p/pdb WWPDB D_1300018902 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.details 'Rh-PDE transmembrane domain' _pdbx_database_related.db_id 7CJ3 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7D7P _pdbx_database_status.recvd_initial_deposition_date 2020-10-05 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Ikuta, T.' 1 0000-0002-8597-0609 'Shihoya, W.' 2 0000-0003-4813-5740 'Yamashita, K.' 3 0000-0002-5442-7582 'Nureki, O.' 4 0000-0003-1813-7008 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 11 _citation.language ? _citation.page_first 5605 _citation.page_last 5605 _citation.title 'Structural insights into the mechanism of rhodopsin phosphodiesterase.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-020-19376-7 _citation.pdbx_database_id_PubMed 33154353 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ikuta, T.' 1 ? primary 'Shihoya, W.' 2 ? primary 'Sugiura, M.' 3 ? primary 'Yoshida, K.' 4 ? primary 'Watari, M.' 5 ? primary 'Tokano, T.' 6 ? primary 'Yamashita, K.' 7 ? primary 'Katayama, K.' 8 ? primary 'Tsunoda, S.P.' 9 ? primary 'Uchihashi, T.' 10 ? primary 'Kandori, H.' 11 ? primary 'Nureki, O.' 12 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 110.82 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 7D7P _cell.details ? _cell.formula_units_Z ? _cell.length_a 117.200 _cell.length_a_esd ? _cell.length_b 67.540 _cell.length_b_esd ? _cell.length_c 56.890 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7D7P _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Phosphodiesterase 42018.496 1 3.1.4.- ? ? ? 2 non-polymer syn 'NONAETHYLENE GLYCOL' 414.488 1 ? ? ? ? 3 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 3 ? ? ? ? 5 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 6 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 7 water nat water 18.015 176 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MDDDVKSWIMNEFSGSTDGKGGDDAKAQQRARGRKGHSAAMDAEKLAASSLFTWDFDALDKSDEDLTAVCVRVFQELHVI EQFNIDEKKLRKWLQKVRTQYNKNPFHNWRHAVMVLHTTYLLLTSVATEFITEVELLAMLIAALSHDLDHNGLTNAFHIN SRSELALVYNDQSVLENHHSHLAFEILLEKGCNVVENLDEDEFKRLRAVIINCILNTDMATHHTKLSKMEEVNRLGGFIN LAENNDQRLFVLAVLLHTADLHNPIKPFESNKRWSARLQKEFNNQVELEAKMNLPSLPFMRGNDEESLAKGEIGFINFVV KPWHQQLSQAFPKLDFLLDTIDANLAEWKAIAESYRQMQENLYFQ ; _entity_poly.pdbx_seq_one_letter_code_can ;MDDDVKSWIMNEFSGSTDGKGGDDAKAQQRARGRKGHSAAMDAEKLAASSLFTWDFDALDKSDEDLTAVCVRVFQELHVI EQFNIDEKKLRKWLQKVRTQYNKNPFHNWRHAVMVLHTTYLLLTSVATEFITEVELLAMLIAALSHDLDHNGLTNAFHIN SRSELALVYNDQSVLENHHSHLAFEILLEKGCNVVENLDEDEFKRLRAVIINCILNTDMATHHTKLSKMEEVNRLGGFIN LAENNDQRLFVLAVLLHTADLHNPIKPFESNKRWSARLQKEFNNQVELEAKMNLPSLPFMRGNDEESLAKGEIGFINFVV KPWHQQLSQAFPKLDFLLDTIDANLAEWKAIAESYRQMQENLYFQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASP n 1 3 ASP n 1 4 ASP n 1 5 VAL n 1 6 LYS n 1 7 SER n 1 8 TRP n 1 9 ILE n 1 10 MET n 1 11 ASN n 1 12 GLU n 1 13 PHE n 1 14 SER n 1 15 GLY n 1 16 SER n 1 17 THR n 1 18 ASP n 1 19 GLY n 1 20 LYS n 1 21 GLY n 1 22 GLY n 1 23 ASP n 1 24 ASP n 1 25 ALA n 1 26 LYS n 1 27 ALA n 1 28 GLN n 1 29 GLN n 1 30 ARG n 1 31 ALA n 1 32 ARG n 1 33 GLY n 1 34 ARG n 1 35 LYS n 1 36 GLY n 1 37 HIS n 1 38 SER n 1 39 ALA n 1 40 ALA n 1 41 MET n 1 42 ASP n 1 43 ALA n 1 44 GLU n 1 45 LYS n 1 46 LEU n 1 47 ALA n 1 48 ALA n 1 49 SER n 1 50 SER n 1 51 LEU n 1 52 PHE n 1 53 THR n 1 54 TRP n 1 55 ASP n 1 56 PHE n 1 57 ASP n 1 58 ALA n 1 59 LEU n 1 60 ASP n 1 61 LYS n 1 62 SER n 1 63 ASP n 1 64 GLU n 1 65 ASP n 1 66 LEU n 1 67 THR n 1 68 ALA n 1 69 VAL n 1 70 CYS n 1 71 VAL n 1 72 ARG n 1 73 VAL n 1 74 PHE n 1 75 GLN n 1 76 GLU n 1 77 LEU n 1 78 HIS n 1 79 VAL n 1 80 ILE n 1 81 GLU n 1 82 GLN n 1 83 PHE n 1 84 ASN n 1 85 ILE n 1 86 ASP n 1 87 GLU n 1 88 LYS n 1 89 LYS n 1 90 LEU n 1 91 ARG n 1 92 LYS n 1 93 TRP n 1 94 LEU n 1 95 GLN n 1 96 LYS n 1 97 VAL n 1 98 ARG n 1 99 THR n 1 100 GLN n 1 101 TYR n 1 102 ASN n 1 103 LYS n 1 104 ASN n 1 105 PRO n 1 106 PHE n 1 107 HIS n 1 108 ASN n 1 109 TRP n 1 110 ARG n 1 111 HIS n 1 112 ALA n 1 113 VAL n 1 114 MET n 1 115 VAL n 1 116 LEU n 1 117 HIS n 1 118 THR n 1 119 THR n 1 120 TYR n 1 121 LEU n 1 122 LEU n 1 123 LEU n 1 124 THR n 1 125 SER n 1 126 VAL n 1 127 ALA n 1 128 THR n 1 129 GLU n 1 130 PHE n 1 131 ILE n 1 132 THR n 1 133 GLU n 1 134 VAL n 1 135 GLU n 1 136 LEU n 1 137 LEU n 1 138 ALA n 1 139 MET n 1 140 LEU n 1 141 ILE n 1 142 ALA n 1 143 ALA n 1 144 LEU n 1 145 SER n 1 146 HIS n 1 147 ASP n 1 148 LEU n 1 149 ASP n 1 150 HIS n 1 151 ASN n 1 152 GLY n 1 153 LEU n 1 154 THR n 1 155 ASN n 1 156 ALA n 1 157 PHE n 1 158 HIS n 1 159 ILE n 1 160 ASN n 1 161 SER n 1 162 ARG n 1 163 SER n 1 164 GLU n 1 165 LEU n 1 166 ALA n 1 167 LEU n 1 168 VAL n 1 169 TYR n 1 170 ASN n 1 171 ASP n 1 172 GLN n 1 173 SER n 1 174 VAL n 1 175 LEU n 1 176 GLU n 1 177 ASN n 1 178 HIS n 1 179 HIS n 1 180 SER n 1 181 HIS n 1 182 LEU n 1 183 ALA n 1 184 PHE n 1 185 GLU n 1 186 ILE n 1 187 LEU n 1 188 LEU n 1 189 GLU n 1 190 LYS n 1 191 GLY n 1 192 CYS n 1 193 ASN n 1 194 VAL n 1 195 VAL n 1 196 GLU n 1 197 ASN n 1 198 LEU n 1 199 ASP n 1 200 GLU n 1 201 ASP n 1 202 GLU n 1 203 PHE n 1 204 LYS n 1 205 ARG n 1 206 LEU n 1 207 ARG n 1 208 ALA n 1 209 VAL n 1 210 ILE n 1 211 ILE n 1 212 ASN n 1 213 CYS n 1 214 ILE n 1 215 LEU n 1 216 ASN n 1 217 THR n 1 218 ASP n 1 219 MET n 1 220 ALA n 1 221 THR n 1 222 HIS n 1 223 HIS n 1 224 THR n 1 225 LYS n 1 226 LEU n 1 227 SER n 1 228 LYS n 1 229 MET n 1 230 GLU n 1 231 GLU n 1 232 VAL n 1 233 ASN n 1 234 ARG n 1 235 LEU n 1 236 GLY n 1 237 GLY n 1 238 PHE n 1 239 ILE n 1 240 ASN n 1 241 LEU n 1 242 ALA n 1 243 GLU n 1 244 ASN n 1 245 ASN n 1 246 ASP n 1 247 GLN n 1 248 ARG n 1 249 LEU n 1 250 PHE n 1 251 VAL n 1 252 LEU n 1 253 ALA n 1 254 VAL n 1 255 LEU n 1 256 LEU n 1 257 HIS n 1 258 THR n 1 259 ALA n 1 260 ASP n 1 261 LEU n 1 262 HIS n 1 263 ASN n 1 264 PRO n 1 265 ILE n 1 266 LYS n 1 267 PRO n 1 268 PHE n 1 269 GLU n 1 270 SER n 1 271 ASN n 1 272 LYS n 1 273 ARG n 1 274 TRP n 1 275 SER n 1 276 ALA n 1 277 ARG n 1 278 LEU n 1 279 GLN n 1 280 LYS n 1 281 GLU n 1 282 PHE n 1 283 ASN n 1 284 ASN n 1 285 GLN n 1 286 VAL n 1 287 GLU n 1 288 LEU n 1 289 GLU n 1 290 ALA n 1 291 LYS n 1 292 MET n 1 293 ASN n 1 294 LEU n 1 295 PRO n 1 296 SER n 1 297 LEU n 1 298 PRO n 1 299 PHE n 1 300 MET n 1 301 ARG n 1 302 GLY n 1 303 ASN n 1 304 ASP n 1 305 GLU n 1 306 GLU n 1 307 SER n 1 308 LEU n 1 309 ALA n 1 310 LYS n 1 311 GLY n 1 312 GLU n 1 313 ILE n 1 314 GLY n 1 315 PHE n 1 316 ILE n 1 317 ASN n 1 318 PHE n 1 319 VAL n 1 320 VAL n 1 321 LYS n 1 322 PRO n 1 323 TRP n 1 324 HIS n 1 325 GLN n 1 326 GLN n 1 327 LEU n 1 328 SER n 1 329 GLN n 1 330 ALA n 1 331 PHE n 1 332 PRO n 1 333 LYS n 1 334 LEU n 1 335 ASP n 1 336 PHE n 1 337 LEU n 1 338 LEU n 1 339 ASP n 1 340 THR n 1 341 ILE n 1 342 ASP n 1 343 ALA n 1 344 ASN n 1 345 LEU n 1 346 ALA n 1 347 GLU n 1 348 TRP n 1 349 LYS n 1 350 ALA n 1 351 ILE n 1 352 ALA n 1 353 GLU n 1 354 SER n 1 355 TYR n 1 356 ARG n 1 357 GLN n 1 358 MET n 1 359 GLN n 1 360 GLU n 1 361 ASN n 1 362 LEU n 1 363 TYR n 1 364 PHE n 1 365 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 365 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene PTSG_02023 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Salpingoeca rosetta (strain ATCC 50818 / BSB-021)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 946362 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code F2TZN0_SALR5 _struct_ref.pdbx_db_accession F2TZN0 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DDDVKSWIMNEFSGSTDGKGGDDAKAQQRARGRKGHSAAMDAEKLAASSLFTWDFDALDKSDEDLTAVCVRVFQELHVIE QFNIDEKKLRKWLQKVRTQYNKNPFHNWRHAVMVLHTTYLLLTSVATEFITEVELLAMLIAALSHDLDHNGLTNAFHINS RSELALVYNDQSVLENHHSHLAFEILLEKGCNVVENLDEDEFKRLRAVIINCILNTDMATHHTKLSKMEEVNRLGGFINL AENNDQRLFVLAVLLHTADLHNPIKPFESNKRWSARLQKEFNNQVELEAKMNLPSLPFMRGNDEESLAKGEIGFINFVVK PWHQQLSQAFPKLDFLLDTIDANLAEWKAIAESYRQM ; _struct_ref.pdbx_align_begin 347 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7D7P _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 358 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession F2TZN0 _struct_ref_seq.db_align_beg 347 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 703 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 347 _struct_ref_seq.pdbx_auth_seq_align_end 703 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7D7P MET A 1 ? UNP F2TZN0 ? ? 'initiating methionine' 346 1 1 7D7P GLN A 359 ? UNP F2TZN0 ? ? 'expression tag' 704 2 1 7D7P GLU A 360 ? UNP F2TZN0 ? ? 'expression tag' 705 3 1 7D7P ASN A 361 ? UNP F2TZN0 ? ? 'expression tag' 706 4 1 7D7P LEU A 362 ? UNP F2TZN0 ? ? 'expression tag' 707 5 1 7D7P TYR A 363 ? UNP F2TZN0 ? ? 'expression tag' 708 6 1 7D7P PHE A 364 ? UNP F2TZN0 ? ? 'expression tag' 709 7 1 7D7P GLN A 365 ? UNP F2TZN0 ? ? 'expression tag' 710 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 2PE non-polymer . 'NONAETHYLENE GLYCOL' ? 'C18 H38 O10' 414.488 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7D7P _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.50 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 50.89 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '29% (v/v) PEG 400, 50mM calcium acetate, pH 5.0, 200mM NaCl' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-05-12 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SPRING-8 BEAMLINE BL32XU' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL32XU _diffrn_source.pdbx_synchrotron_site SPring-8 # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 7D7P _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.1 _reflns.d_resolution_low 47.53 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 22066 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 90.7 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 11.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 11.4 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.162 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.992 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.1 _reflns_shell.d_res_low 2.18 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1965 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.798 _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.660 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7D7P _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.100 _refine.ls_d_res_low 47.516 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 21969 _refine.ls_number_reflns_R_free 1101 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 90.30 _refine.ls_percent_reflns_R_free 5.01 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1907 _refine.ls_R_factor_R_free 0.2399 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1882 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5VYD _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 22.94 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.22 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2600 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 38 _refine_hist.number_atoms_solvent 176 _refine_hist.number_atoms_total 2814 _refine_hist.d_res_high 2.100 _refine_hist.d_res_low 47.516 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.002 ? 2685 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.418 ? 3633 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 6.073 ? 1600 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.034 ? 414 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.003 ? 469 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.1000 2.1956 . . 121 2282 80.00 . . . 0.2995 . 0.2375 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1956 2.3114 . . 138 2613 91.00 . . . 0.2845 . 0.2077 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3114 2.4562 . . 144 2743 95.00 . . . 0.2350 . 0.1977 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4562 2.6458 . . 142 2693 94.00 . . . 0.2606 . 0.1915 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.6458 2.9120 . . 141 2678 93.00 . . . 0.2826 . 0.1876 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.9120 3.3333 . . 140 2652 91.00 . . . 0.2094 . 0.1866 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.3333 4.1992 . . 140 2654 91.00 . . . 0.2281 . 0.1730 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.1992 47.516 . . 135 2553 86.00 . . . 0.2181 . 0.1817 . . . . . . . . . . . # _struct.entry_id 7D7P _struct.title 'Crystal structure of the phosphodiesterase domain of Salpingoeca rosetta rhodopsin phosphodiesterase' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7D7P _struct_keywords.text 'microbial rhodopsin, eight-transmembrane, light-dependent phosphodiesterase, MEMBRANE PROTEIN' _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 6 ? I N N 7 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 42 ? ALA A 48 ? ASP A 387 ALA A 393 1 ? 7 HELX_P HELX_P2 AA2 ASP A 57 ? LYS A 61 ? ASP A 402 LYS A 406 5 ? 5 HELX_P HELX_P3 AA3 SER A 62 ? LEU A 77 ? SER A 407 LEU A 422 1 ? 16 HELX_P HELX_P4 AA4 HIS A 78 ? PHE A 83 ? HIS A 423 PHE A 428 1 ? 6 HELX_P HELX_P5 AA5 ASP A 86 ? GLN A 100 ? ASP A 431 GLN A 445 1 ? 15 HELX_P HELX_P6 AA6 ASN A 108 ? ALA A 127 ? ASN A 453 ALA A 472 1 ? 20 HELX_P HELX_P7 AA7 THR A 132 ? HIS A 146 ? THR A 477 HIS A 491 1 ? 15 HELX_P HELX_P8 AA8 THR A 154 ? ARG A 162 ? THR A 499 ARG A 507 1 ? 9 HELX_P HELX_P9 AA9 SER A 163 ? ASN A 170 ? SER A 508 ASN A 515 1 ? 8 HELX_P HELX_P10 AB1 SER A 173 ? LEU A 188 ? SER A 518 LEU A 533 1 ? 16 HELX_P HELX_P11 AB2 GLU A 189 ? ASN A 193 ? GLU A 534 ASN A 538 5 ? 5 HELX_P HELX_P12 AB3 ASP A 199 ? ASN A 216 ? ASP A 544 ASN A 561 1 ? 18 HELX_P HELX_P13 AB4 THR A 217 ? ALA A 220 ? THR A 562 ALA A 565 5 ? 4 HELX_P HELX_P14 AB5 THR A 221 ? LEU A 235 ? THR A 566 LEU A 580 1 ? 15 HELX_P HELX_P15 AB6 ASN A 244 ? LEU A 261 ? ASN A 589 LEU A 606 1 ? 18 HELX_P HELX_P16 AB7 HIS A 262 ? LYS A 266 ? HIS A 607 LYS A 611 5 ? 5 HELX_P HELX_P17 AB8 PRO A 267 ? MET A 292 ? PRO A 612 MET A 637 1 ? 26 HELX_P HELX_P18 AB9 LEU A 297 ? GLY A 302 ? LEU A 642 GLY A 647 5 ? 6 HELX_P HELX_P19 AC1 ASP A 304 ? VAL A 319 ? ASP A 649 VAL A 664 1 ? 16 HELX_P HELX_P20 AC2 VAL A 319 ? PHE A 331 ? VAL A 664 PHE A 676 1 ? 13 HELX_P HELX_P21 AC3 PRO A 332 ? LEU A 334 ? PRO A 677 LEU A 679 5 ? 3 HELX_P HELX_P22 AC4 ASP A 335 ? GLU A 360 ? ASP A 680 GLU A 705 1 ? 26 HELX_P HELX_P23 AC5 ASN A 361 ? TYR A 363 ? ASN A 706 TYR A 708 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A HIS 111 NE2 ? ? ? 1_555 G ZN . ZN ? ? A HIS 456 A ZN 806 1_555 ? ? ? ? ? ? ? 2.253 ? ? metalc2 metalc ? ? A HIS 146 NE2 ? ? ? 1_555 G ZN . ZN ? ? A HIS 491 A ZN 806 1_555 ? ? ? ? ? ? ? 2.199 ? ? metalc3 metalc ? ? A ASP 147 OD2 ? ? ? 1_555 G ZN . ZN ? ? A ASP 492 A ZN 806 1_555 ? ? ? ? ? ? ? 2.198 ? ? metalc4 metalc ? ? A ASP 147 OD1 ? ? ? 1_555 H MG . MG ? ? A ASP 492 A MG 807 1_555 ? ? ? ? ? ? ? 2.163 ? ? metalc5 metalc ? ? A ASP 260 OD1 ? ? ? 1_555 G ZN . ZN ? ? A ASP 605 A ZN 806 1_555 ? ? ? ? ? ? ? 2.264 ? ? metalc6 metalc ? ? G ZN . ZN ? ? ? 1_555 I HOH . O ? ? A ZN 806 A HOH 916 1_555 ? ? ? ? ? ? ? 2.491 ? ? metalc7 metalc ? ? G ZN . ZN ? ? ? 1_555 I HOH . O ? ? A ZN 806 A HOH 974 1_555 ? ? ? ? ? ? ? 2.377 ? ? metalc8 metalc ? ? H MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 807 A HOH 916 1_555 ? ? ? ? ? ? ? 2.046 ? ? metalc9 metalc ? ? H MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 807 A HOH 917 1_555 ? ? ? ? ? ? ? 2.228 ? ? metalc10 metalc ? ? H MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 807 A HOH 953 1_555 ? ? ? ? ? ? ? 2.264 ? ? metalc11 metalc ? ? H MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 807 A HOH 954 1_555 ? ? ? ? ? ? ? 2.155 ? ? metalc12 metalc ? ? H MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 807 A HOH 1003 1_555 ? ? ? ? ? ? ? 2.041 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 7D7P _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.008532 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003244 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014806 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018805 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C MG N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 346 ? ? ? A . n A 1 2 ASP 2 347 ? ? ? A . n A 1 3 ASP 3 348 ? ? ? A . n A 1 4 ASP 4 349 ? ? ? A . n A 1 5 VAL 5 350 ? ? ? A . n A 1 6 LYS 6 351 ? ? ? A . n A 1 7 SER 7 352 ? ? ? A . n A 1 8 TRP 8 353 ? ? ? A . n A 1 9 ILE 9 354 ? ? ? A . n A 1 10 MET 10 355 ? ? ? A . n A 1 11 ASN 11 356 ? ? ? A . n A 1 12 GLU 12 357 ? ? ? A . n A 1 13 PHE 13 358 ? ? ? A . n A 1 14 SER 14 359 ? ? ? A . n A 1 15 GLY 15 360 ? ? ? A . n A 1 16 SER 16 361 ? ? ? A . n A 1 17 THR 17 362 ? ? ? A . n A 1 18 ASP 18 363 ? ? ? A . n A 1 19 GLY 19 364 ? ? ? A . n A 1 20 LYS 20 365 ? ? ? A . n A 1 21 GLY 21 366 ? ? ? A . n A 1 22 GLY 22 367 ? ? ? A . n A 1 23 ASP 23 368 ? ? ? A . n A 1 24 ASP 24 369 ? ? ? A . n A 1 25 ALA 25 370 ? ? ? A . n A 1 26 LYS 26 371 ? ? ? A . n A 1 27 ALA 27 372 ? ? ? A . n A 1 28 GLN 28 373 ? ? ? A . n A 1 29 GLN 29 374 ? ? ? A . n A 1 30 ARG 30 375 ? ? ? A . n A 1 31 ALA 31 376 ? ? ? A . n A 1 32 ARG 32 377 ? ? ? A . n A 1 33 GLY 33 378 ? ? ? A . n A 1 34 ARG 34 379 ? ? ? A . n A 1 35 LYS 35 380 380 LYS LYS A . n A 1 36 GLY 36 381 381 GLY GLY A . n A 1 37 HIS 37 382 382 HIS HIS A . n A 1 38 SER 38 383 383 SER SER A . n A 1 39 ALA 39 384 384 ALA ALA A . n A 1 40 ALA 40 385 385 ALA ALA A . n A 1 41 MET 41 386 386 MET MET A . n A 1 42 ASP 42 387 387 ASP ASP A . n A 1 43 ALA 43 388 388 ALA ALA A . n A 1 44 GLU 44 389 389 GLU GLU A . n A 1 45 LYS 45 390 390 LYS LYS A . n A 1 46 LEU 46 391 391 LEU LEU A . n A 1 47 ALA 47 392 392 ALA ALA A . n A 1 48 ALA 48 393 393 ALA ALA A . n A 1 49 SER 49 394 394 SER SER A . n A 1 50 SER 50 395 395 SER SER A . n A 1 51 LEU 51 396 396 LEU LEU A . n A 1 52 PHE 52 397 397 PHE PHE A . n A 1 53 THR 53 398 398 THR THR A . n A 1 54 TRP 54 399 399 TRP TRP A . n A 1 55 ASP 55 400 400 ASP ASP A . n A 1 56 PHE 56 401 401 PHE PHE A . n A 1 57 ASP 57 402 402 ASP ASP A . n A 1 58 ALA 58 403 403 ALA ALA A . n A 1 59 LEU 59 404 404 LEU LEU A . n A 1 60 ASP 60 405 405 ASP ASP A . n A 1 61 LYS 61 406 406 LYS LYS A . n A 1 62 SER 62 407 407 SER SER A . n A 1 63 ASP 63 408 408 ASP ASP A . n A 1 64 GLU 64 409 409 GLU GLU A . n A 1 65 ASP 65 410 410 ASP ASP A . n A 1 66 LEU 66 411 411 LEU LEU A . n A 1 67 THR 67 412 412 THR THR A . n A 1 68 ALA 68 413 413 ALA ALA A . n A 1 69 VAL 69 414 414 VAL VAL A . n A 1 70 CYS 70 415 415 CYS CYS A . n A 1 71 VAL 71 416 416 VAL VAL A . n A 1 72 ARG 72 417 417 ARG ARG A . n A 1 73 VAL 73 418 418 VAL VAL A . n A 1 74 PHE 74 419 419 PHE PHE A . n A 1 75 GLN 75 420 420 GLN GLN A . n A 1 76 GLU 76 421 421 GLU GLU A . n A 1 77 LEU 77 422 422 LEU LEU A . n A 1 78 HIS 78 423 423 HIS HIS A . n A 1 79 VAL 79 424 424 VAL VAL A . n A 1 80 ILE 80 425 425 ILE ILE A . n A 1 81 GLU 81 426 426 GLU GLU A . n A 1 82 GLN 82 427 427 GLN GLN A . n A 1 83 PHE 83 428 428 PHE PHE A . n A 1 84 ASN 84 429 429 ASN ASN A . n A 1 85 ILE 85 430 430 ILE ILE A . n A 1 86 ASP 86 431 431 ASP ASP A . n A 1 87 GLU 87 432 432 GLU GLU A . n A 1 88 LYS 88 433 433 LYS LYS A . n A 1 89 LYS 89 434 434 LYS LYS A . n A 1 90 LEU 90 435 435 LEU LEU A . n A 1 91 ARG 91 436 436 ARG ARG A . n A 1 92 LYS 92 437 437 LYS LYS A . n A 1 93 TRP 93 438 438 TRP TRP A . n A 1 94 LEU 94 439 439 LEU LEU A . n A 1 95 GLN 95 440 440 GLN GLN A . n A 1 96 LYS 96 441 441 LYS LYS A . n A 1 97 VAL 97 442 442 VAL VAL A . n A 1 98 ARG 98 443 443 ARG ARG A . n A 1 99 THR 99 444 444 THR THR A . n A 1 100 GLN 100 445 445 GLN GLN A . n A 1 101 TYR 101 446 446 TYR TYR A . n A 1 102 ASN 102 447 447 ASN ASN A . n A 1 103 LYS 103 448 448 LYS LYS A . n A 1 104 ASN 104 449 449 ASN ASN A . n A 1 105 PRO 105 450 450 PRO PRO A . n A 1 106 PHE 106 451 451 PHE PHE A . n A 1 107 HIS 107 452 452 HIS HIS A . n A 1 108 ASN 108 453 453 ASN ASN A . n A 1 109 TRP 109 454 454 TRP TRP A . n A 1 110 ARG 110 455 455 ARG ARG A . n A 1 111 HIS 111 456 456 HIS HIS A . n A 1 112 ALA 112 457 457 ALA ALA A . n A 1 113 VAL 113 458 458 VAL VAL A . n A 1 114 MET 114 459 459 MET MET A . n A 1 115 VAL 115 460 460 VAL VAL A . n A 1 116 LEU 116 461 461 LEU LEU A . n A 1 117 HIS 117 462 462 HIS HIS A . n A 1 118 THR 118 463 463 THR THR A . n A 1 119 THR 119 464 464 THR THR A . n A 1 120 TYR 120 465 465 TYR TYR A . n A 1 121 LEU 121 466 466 LEU LEU A . n A 1 122 LEU 122 467 467 LEU LEU A . n A 1 123 LEU 123 468 468 LEU LEU A . n A 1 124 THR 124 469 469 THR THR A . n A 1 125 SER 125 470 470 SER SER A . n A 1 126 VAL 126 471 471 VAL VAL A . n A 1 127 ALA 127 472 472 ALA ALA A . n A 1 128 THR 128 473 473 THR THR A . n A 1 129 GLU 129 474 474 GLU GLU A . n A 1 130 PHE 130 475 475 PHE PHE A . n A 1 131 ILE 131 476 476 ILE ILE A . n A 1 132 THR 132 477 477 THR THR A . n A 1 133 GLU 133 478 478 GLU GLU A . n A 1 134 VAL 134 479 479 VAL VAL A . n A 1 135 GLU 135 480 480 GLU GLU A . n A 1 136 LEU 136 481 481 LEU LEU A . n A 1 137 LEU 137 482 482 LEU LEU A . n A 1 138 ALA 138 483 483 ALA ALA A . n A 1 139 MET 139 484 484 MET MET A . n A 1 140 LEU 140 485 485 LEU LEU A . n A 1 141 ILE 141 486 486 ILE ILE A . n A 1 142 ALA 142 487 487 ALA ALA A . n A 1 143 ALA 143 488 488 ALA ALA A . n A 1 144 LEU 144 489 489 LEU LEU A . n A 1 145 SER 145 490 490 SER SER A . n A 1 146 HIS 146 491 491 HIS HIS A . n A 1 147 ASP 147 492 492 ASP ASP A . n A 1 148 LEU 148 493 493 LEU LEU A . n A 1 149 ASP 149 494 494 ASP ASP A . n A 1 150 HIS 150 495 495 HIS HIS A . n A 1 151 ASN 151 496 496 ASN ASN A . n A 1 152 GLY 152 497 497 GLY GLY A . n A 1 153 LEU 153 498 498 LEU LEU A . n A 1 154 THR 154 499 499 THR THR A . n A 1 155 ASN 155 500 500 ASN ASN A . n A 1 156 ALA 156 501 501 ALA ALA A . n A 1 157 PHE 157 502 502 PHE PHE A . n A 1 158 HIS 158 503 503 HIS HIS A . n A 1 159 ILE 159 504 504 ILE ILE A . n A 1 160 ASN 160 505 505 ASN ASN A . n A 1 161 SER 161 506 506 SER SER A . n A 1 162 ARG 162 507 507 ARG ARG A . n A 1 163 SER 163 508 508 SER SER A . n A 1 164 GLU 164 509 509 GLU GLU A . n A 1 165 LEU 165 510 510 LEU LEU A . n A 1 166 ALA 166 511 511 ALA ALA A . n A 1 167 LEU 167 512 512 LEU LEU A . n A 1 168 VAL 168 513 513 VAL VAL A . n A 1 169 TYR 169 514 514 TYR TYR A . n A 1 170 ASN 170 515 515 ASN ASN A . n A 1 171 ASP 171 516 516 ASP ASP A . n A 1 172 GLN 172 517 517 GLN GLN A . n A 1 173 SER 173 518 518 SER SER A . n A 1 174 VAL 174 519 519 VAL VAL A . n A 1 175 LEU 175 520 520 LEU LEU A . n A 1 176 GLU 176 521 521 GLU GLU A . n A 1 177 ASN 177 522 522 ASN ASN A . n A 1 178 HIS 178 523 523 HIS HIS A . n A 1 179 HIS 179 524 524 HIS HIS A . n A 1 180 SER 180 525 525 SER SER A . n A 1 181 HIS 181 526 526 HIS HIS A . n A 1 182 LEU 182 527 527 LEU LEU A . n A 1 183 ALA 183 528 528 ALA ALA A . n A 1 184 PHE 184 529 529 PHE PHE A . n A 1 185 GLU 185 530 530 GLU GLU A . n A 1 186 ILE 186 531 531 ILE ILE A . n A 1 187 LEU 187 532 532 LEU LEU A . n A 1 188 LEU 188 533 533 LEU LEU A . n A 1 189 GLU 189 534 534 GLU GLU A . n A 1 190 LYS 190 535 535 LYS LYS A . n A 1 191 GLY 191 536 536 GLY GLY A . n A 1 192 CYS 192 537 537 CYS CYS A . n A 1 193 ASN 193 538 538 ASN ASN A . n A 1 194 VAL 194 539 539 VAL VAL A . n A 1 195 VAL 195 540 540 VAL VAL A . n A 1 196 GLU 196 541 541 GLU GLU A . n A 1 197 ASN 197 542 542 ASN ASN A . n A 1 198 LEU 198 543 543 LEU LEU A . n A 1 199 ASP 199 544 544 ASP ASP A . n A 1 200 GLU 200 545 545 GLU GLU A . n A 1 201 ASP 201 546 546 ASP ASP A . n A 1 202 GLU 202 547 547 GLU GLU A . n A 1 203 PHE 203 548 548 PHE PHE A . n A 1 204 LYS 204 549 549 LYS LYS A . n A 1 205 ARG 205 550 550 ARG ARG A . n A 1 206 LEU 206 551 551 LEU LEU A . n A 1 207 ARG 207 552 552 ARG ARG A . n A 1 208 ALA 208 553 553 ALA ALA A . n A 1 209 VAL 209 554 554 VAL VAL A . n A 1 210 ILE 210 555 555 ILE ILE A . n A 1 211 ILE 211 556 556 ILE ILE A . n A 1 212 ASN 212 557 557 ASN ASN A . n A 1 213 CYS 213 558 558 CYS CYS A . n A 1 214 ILE 214 559 559 ILE ILE A . n A 1 215 LEU 215 560 560 LEU LEU A . n A 1 216 ASN 216 561 561 ASN ASN A . n A 1 217 THR 217 562 562 THR THR A . n A 1 218 ASP 218 563 563 ASP ASP A . n A 1 219 MET 219 564 564 MET MET A . n A 1 220 ALA 220 565 565 ALA ALA A . n A 1 221 THR 221 566 566 THR THR A . n A 1 222 HIS 222 567 567 HIS HIS A . n A 1 223 HIS 223 568 568 HIS HIS A . n A 1 224 THR 224 569 569 THR THR A . n A 1 225 LYS 225 570 570 LYS LYS A . n A 1 226 LEU 226 571 571 LEU LEU A . n A 1 227 SER 227 572 572 SER SER A . n A 1 228 LYS 228 573 573 LYS LYS A . n A 1 229 MET 229 574 574 MET MET A . n A 1 230 GLU 230 575 575 GLU GLU A . n A 1 231 GLU 231 576 576 GLU GLU A . n A 1 232 VAL 232 577 577 VAL VAL A . n A 1 233 ASN 233 578 578 ASN ASN A . n A 1 234 ARG 234 579 579 ARG ARG A . n A 1 235 LEU 235 580 580 LEU LEU A . n A 1 236 GLY 236 581 581 GLY GLY A . n A 1 237 GLY 237 582 582 GLY GLY A . n A 1 238 PHE 238 583 583 PHE PHE A . n A 1 239 ILE 239 584 584 ILE ILE A . n A 1 240 ASN 240 585 585 ASN ASN A . n A 1 241 LEU 241 586 586 LEU LEU A . n A 1 242 ALA 242 587 587 ALA ALA A . n A 1 243 GLU 243 588 588 GLU GLU A . n A 1 244 ASN 244 589 589 ASN ASN A . n A 1 245 ASN 245 590 590 ASN ASN A . n A 1 246 ASP 246 591 591 ASP ASP A . n A 1 247 GLN 247 592 592 GLN GLN A . n A 1 248 ARG 248 593 593 ARG ARG A . n A 1 249 LEU 249 594 594 LEU LEU A . n A 1 250 PHE 250 595 595 PHE PHE A . n A 1 251 VAL 251 596 596 VAL VAL A . n A 1 252 LEU 252 597 597 LEU LEU A . n A 1 253 ALA 253 598 598 ALA ALA A . n A 1 254 VAL 254 599 599 VAL VAL A . n A 1 255 LEU 255 600 600 LEU LEU A . n A 1 256 LEU 256 601 601 LEU LEU A . n A 1 257 HIS 257 602 602 HIS HIS A . n A 1 258 THR 258 603 603 THR THR A . n A 1 259 ALA 259 604 604 ALA ALA A . n A 1 260 ASP 260 605 605 ASP ASP A . n A 1 261 LEU 261 606 606 LEU LEU A . n A 1 262 HIS 262 607 607 HIS HIS A . n A 1 263 ASN 263 608 608 ASN ASN A . n A 1 264 PRO 264 609 609 PRO PRO A . n A 1 265 ILE 265 610 610 ILE ILE A . n A 1 266 LYS 266 611 611 LYS LYS A . n A 1 267 PRO 267 612 612 PRO PRO A . n A 1 268 PHE 268 613 613 PHE PHE A . n A 1 269 GLU 269 614 614 GLU GLU A . n A 1 270 SER 270 615 615 SER SER A . n A 1 271 ASN 271 616 616 ASN ASN A . n A 1 272 LYS 272 617 617 LYS LYS A . n A 1 273 ARG 273 618 618 ARG ARG A . n A 1 274 TRP 274 619 619 TRP TRP A . n A 1 275 SER 275 620 620 SER SER A . n A 1 276 ALA 276 621 621 ALA ALA A . n A 1 277 ARG 277 622 622 ARG ARG A . n A 1 278 LEU 278 623 623 LEU LEU A . n A 1 279 GLN 279 624 624 GLN GLN A . n A 1 280 LYS 280 625 625 LYS LYS A . n A 1 281 GLU 281 626 626 GLU GLU A . n A 1 282 PHE 282 627 627 PHE PHE A . n A 1 283 ASN 283 628 628 ASN ASN A . n A 1 284 ASN 284 629 629 ASN ASN A . n A 1 285 GLN 285 630 630 GLN GLN A . n A 1 286 VAL 286 631 631 VAL VAL A . n A 1 287 GLU 287 632 632 GLU GLU A . n A 1 288 LEU 288 633 633 LEU LEU A . n A 1 289 GLU 289 634 634 GLU GLU A . n A 1 290 ALA 290 635 635 ALA ALA A . n A 1 291 LYS 291 636 636 LYS LYS A . n A 1 292 MET 292 637 637 MET MET A . n A 1 293 ASN 293 638 638 ASN ASN A . n A 1 294 LEU 294 639 639 LEU LEU A . n A 1 295 PRO 295 640 640 PRO PRO A . n A 1 296 SER 296 641 641 SER SER A . n A 1 297 LEU 297 642 642 LEU LEU A . n A 1 298 PRO 298 643 643 PRO PRO A . n A 1 299 PHE 299 644 644 PHE PHE A . n A 1 300 MET 300 645 645 MET MET A . n A 1 301 ARG 301 646 646 ARG ARG A . n A 1 302 GLY 302 647 647 GLY GLY A . n A 1 303 ASN 303 648 648 ASN ASN A . n A 1 304 ASP 304 649 649 ASP ASP A . n A 1 305 GLU 305 650 650 GLU GLU A . n A 1 306 GLU 306 651 651 GLU GLU A . n A 1 307 SER 307 652 652 SER SER A . n A 1 308 LEU 308 653 653 LEU LEU A . n A 1 309 ALA 309 654 654 ALA ALA A . n A 1 310 LYS 310 655 655 LYS LYS A . n A 1 311 GLY 311 656 656 GLY GLY A . n A 1 312 GLU 312 657 657 GLU GLU A . n A 1 313 ILE 313 658 658 ILE ILE A . n A 1 314 GLY 314 659 659 GLY GLY A . n A 1 315 PHE 315 660 660 PHE PHE A . n A 1 316 ILE 316 661 661 ILE ILE A . n A 1 317 ASN 317 662 662 ASN ASN A . n A 1 318 PHE 318 663 663 PHE PHE A . n A 1 319 VAL 319 664 664 VAL VAL A . n A 1 320 VAL 320 665 665 VAL VAL A . n A 1 321 LYS 321 666 666 LYS LYS A . n A 1 322 PRO 322 667 667 PRO PRO A . n A 1 323 TRP 323 668 668 TRP TRP A . n A 1 324 HIS 324 669 669 HIS HIS A . n A 1 325 GLN 325 670 670 GLN GLN A . n A 1 326 GLN 326 671 671 GLN GLN A . n A 1 327 LEU 327 672 672 LEU LEU A . n A 1 328 SER 328 673 673 SER SER A . n A 1 329 GLN 329 674 674 GLN GLN A . n A 1 330 ALA 330 675 675 ALA ALA A . n A 1 331 PHE 331 676 676 PHE PHE A . n A 1 332 PRO 332 677 677 PRO PRO A . n A 1 333 LYS 333 678 678 LYS LYS A . n A 1 334 LEU 334 679 679 LEU LEU A . n A 1 335 ASP 335 680 680 ASP ASP A . n A 1 336 PHE 336 681 681 PHE PHE A . n A 1 337 LEU 337 682 682 LEU LEU A . n A 1 338 LEU 338 683 683 LEU LEU A . n A 1 339 ASP 339 684 684 ASP ASP A . n A 1 340 THR 340 685 685 THR THR A . n A 1 341 ILE 341 686 686 ILE ILE A . n A 1 342 ASP 342 687 687 ASP ASP A . n A 1 343 ALA 343 688 688 ALA ALA A . n A 1 344 ASN 344 689 689 ASN ASN A . n A 1 345 LEU 345 690 690 LEU LEU A . n A 1 346 ALA 346 691 691 ALA ALA A . n A 1 347 GLU 347 692 692 GLU GLU A . n A 1 348 TRP 348 693 693 TRP TRP A . n A 1 349 LYS 349 694 694 LYS LYS A . n A 1 350 ALA 350 695 695 ALA ALA A . n A 1 351 ILE 351 696 696 ILE ILE A . n A 1 352 ALA 352 697 697 ALA ALA A . n A 1 353 GLU 353 698 698 GLU GLU A . n A 1 354 SER 354 699 699 SER SER A . n A 1 355 TYR 355 700 700 TYR TYR A . n A 1 356 ARG 356 701 701 ARG ARG A . n A 1 357 GLN 357 702 702 GLN GLN A . n A 1 358 MET 358 703 703 MET MET A . n A 1 359 GLN 359 704 704 GLN GLN A . n A 1 360 GLU 360 705 705 GLU GLU A . n A 1 361 ASN 361 706 706 ASN ASN A . n A 1 362 LEU 362 707 707 LEU LEU A . n A 1 363 TYR 363 708 708 TYR TYR A . n A 1 364 PHE 364 709 ? ? ? A . n A 1 365 GLN 365 710 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 2PE 1 801 801 2PE 2PE A . C 3 PEG 1 802 901 PEG PEG A . D 4 EDO 1 803 1001 EDO EDO A . E 4 EDO 1 804 1101 EDO EDO A . F 4 EDO 1 805 1201 EDO EDO A . G 5 ZN 1 806 720 ZN ZN A . H 6 MG 1 807 721 MG MG A . I 7 HOH 1 901 165 HOH HOH A . I 7 HOH 2 902 110 HOH HOH A . I 7 HOH 3 903 33 HOH HOH A . I 7 HOH 4 904 62 HOH HOH A . I 7 HOH 5 905 91 HOH HOH A . I 7 HOH 6 906 162 HOH HOH A . I 7 HOH 7 907 51 HOH HOH A . I 7 HOH 8 908 138 HOH HOH A . I 7 HOH 9 909 113 HOH HOH A . I 7 HOH 10 910 10 HOH HOH A . I 7 HOH 11 911 18 HOH HOH A . I 7 HOH 12 912 111 HOH HOH A . I 7 HOH 13 913 12 HOH HOH A . I 7 HOH 14 914 71 HOH HOH A . I 7 HOH 15 915 68 HOH HOH A . I 7 HOH 16 916 24 HOH HOH A . I 7 HOH 17 917 25 HOH HOH A . I 7 HOH 18 918 120 HOH HOH A . I 7 HOH 19 919 45 HOH HOH A . I 7 HOH 20 920 76 HOH HOH A . I 7 HOH 21 921 172 HOH HOH A . I 7 HOH 22 922 57 HOH HOH A . I 7 HOH 23 923 8 HOH HOH A . I 7 HOH 24 924 34 HOH HOH A . I 7 HOH 25 925 81 HOH HOH A . I 7 HOH 26 926 17 HOH HOH A . I 7 HOH 27 927 5 HOH HOH A . I 7 HOH 28 928 38 HOH HOH A . I 7 HOH 29 929 7 HOH HOH A . I 7 HOH 30 930 41 HOH HOH A . I 7 HOH 31 931 109 HOH HOH A . I 7 HOH 32 932 35 HOH HOH A . I 7 HOH 33 933 163 HOH HOH A . I 7 HOH 34 934 3 HOH HOH A . I 7 HOH 35 935 85 HOH HOH A . I 7 HOH 36 936 116 HOH HOH A . I 7 HOH 37 937 23 HOH HOH A . I 7 HOH 38 938 58 HOH HOH A . I 7 HOH 39 939 124 HOH HOH A . I 7 HOH 40 940 14 HOH HOH A . I 7 HOH 41 941 82 HOH HOH A . I 7 HOH 42 942 95 HOH HOH A . I 7 HOH 43 943 21 HOH HOH A . I 7 HOH 44 944 153 HOH HOH A . I 7 HOH 45 945 50 HOH HOH A . I 7 HOH 46 946 136 HOH HOH A . I 7 HOH 47 947 44 HOH HOH A . I 7 HOH 48 948 133 HOH HOH A . I 7 HOH 49 949 9 HOH HOH A . I 7 HOH 50 950 141 HOH HOH A . I 7 HOH 51 951 107 HOH HOH A . I 7 HOH 52 952 150 HOH HOH A . I 7 HOH 53 953 26 HOH HOH A . I 7 HOH 54 954 27 HOH HOH A . I 7 HOH 55 955 11 HOH HOH A . I 7 HOH 56 956 55 HOH HOH A . I 7 HOH 57 957 114 HOH HOH A . I 7 HOH 58 958 13 HOH HOH A . I 7 HOH 59 959 125 HOH HOH A . I 7 HOH 60 960 123 HOH HOH A . I 7 HOH 61 961 37 HOH HOH A . I 7 HOH 62 962 89 HOH HOH A . I 7 HOH 63 963 92 HOH HOH A . I 7 HOH 64 964 54 HOH HOH A . I 7 HOH 65 965 103 HOH HOH A . I 7 HOH 66 966 67 HOH HOH A . I 7 HOH 67 967 119 HOH HOH A . I 7 HOH 68 968 84 HOH HOH A . I 7 HOH 69 969 70 HOH HOH A . I 7 HOH 70 970 77 HOH HOH A . I 7 HOH 71 971 128 HOH HOH A . I 7 HOH 72 972 22 HOH HOH A . I 7 HOH 73 973 19 HOH HOH A . I 7 HOH 74 974 29 HOH HOH A . I 7 HOH 75 975 100 HOH HOH A . I 7 HOH 76 976 104 HOH HOH A . I 7 HOH 77 977 60 HOH HOH A . I 7 HOH 78 978 69 HOH HOH A . I 7 HOH 79 979 2 HOH HOH A . I 7 HOH 80 980 63 HOH HOH A . I 7 HOH 81 981 16 HOH HOH A . I 7 HOH 82 982 157 HOH HOH A . I 7 HOH 83 983 79 HOH HOH A . I 7 HOH 84 984 102 HOH HOH A . I 7 HOH 85 985 74 HOH HOH A . I 7 HOH 86 986 126 HOH HOH A . I 7 HOH 87 987 171 HOH HOH A . I 7 HOH 88 988 161 HOH HOH A . I 7 HOH 89 989 131 HOH HOH A . I 7 HOH 90 990 127 HOH HOH A . I 7 HOH 91 991 66 HOH HOH A . I 7 HOH 92 992 118 HOH HOH A . I 7 HOH 93 993 87 HOH HOH A . I 7 HOH 94 994 31 HOH HOH A . I 7 HOH 95 995 48 HOH HOH A . I 7 HOH 96 996 15 HOH HOH A . I 7 HOH 97 997 78 HOH HOH A . I 7 HOH 98 998 39 HOH HOH A . I 7 HOH 99 999 64 HOH HOH A . I 7 HOH 100 1000 145 HOH HOH A . I 7 HOH 101 1001 73 HOH HOH A . I 7 HOH 102 1002 101 HOH HOH A . I 7 HOH 103 1003 28 HOH HOH A . I 7 HOH 104 1004 20 HOH HOH A . I 7 HOH 105 1005 72 HOH HOH A . I 7 HOH 106 1006 170 HOH HOH A . I 7 HOH 107 1007 6 HOH HOH A . I 7 HOH 108 1008 32 HOH HOH A . I 7 HOH 109 1009 143 HOH HOH A . I 7 HOH 110 1010 146 HOH HOH A . I 7 HOH 111 1011 56 HOH HOH A . I 7 HOH 112 1012 140 HOH HOH A . I 7 HOH 113 1013 97 HOH HOH A . I 7 HOH 114 1014 147 HOH HOH A . I 7 HOH 115 1015 117 HOH HOH A . I 7 HOH 116 1016 160 HOH HOH A . I 7 HOH 117 1017 166 HOH HOH A . I 7 HOH 118 1018 36 HOH HOH A . I 7 HOH 119 1019 121 HOH HOH A . I 7 HOH 120 1020 52 HOH HOH A . I 7 HOH 121 1021 53 HOH HOH A . I 7 HOH 122 1022 30 HOH HOH A . I 7 HOH 123 1023 75 HOH HOH A . I 7 HOH 124 1024 40 HOH HOH A . I 7 HOH 125 1025 61 HOH HOH A . I 7 HOH 126 1026 49 HOH HOH A . I 7 HOH 127 1027 42 HOH HOH A . I 7 HOH 128 1028 130 HOH HOH A . I 7 HOH 129 1029 88 HOH HOH A . I 7 HOH 130 1030 47 HOH HOH A . I 7 HOH 131 1031 99 HOH HOH A . I 7 HOH 132 1032 173 HOH HOH A . I 7 HOH 133 1033 46 HOH HOH A . I 7 HOH 134 1034 134 HOH HOH A . I 7 HOH 135 1035 1 HOH HOH A . I 7 HOH 136 1036 86 HOH HOH A . I 7 HOH 137 1037 152 HOH HOH A . I 7 HOH 138 1038 159 HOH HOH A . I 7 HOH 139 1039 169 HOH HOH A . I 7 HOH 140 1040 135 HOH HOH A . I 7 HOH 141 1041 59 HOH HOH A . I 7 HOH 142 1042 105 HOH HOH A . I 7 HOH 143 1043 176 HOH HOH A . I 7 HOH 144 1044 4 HOH HOH A . I 7 HOH 145 1045 139 HOH HOH A . I 7 HOH 146 1046 43 HOH HOH A . I 7 HOH 147 1047 158 HOH HOH A . I 7 HOH 148 1048 106 HOH HOH A . I 7 HOH 149 1049 90 HOH HOH A . I 7 HOH 150 1050 129 HOH HOH A . I 7 HOH 151 1051 167 HOH HOH A . I 7 HOH 152 1052 122 HOH HOH A . I 7 HOH 153 1053 93 HOH HOH A . I 7 HOH 154 1054 154 HOH HOH A . I 7 HOH 155 1055 142 HOH HOH A . I 7 HOH 156 1056 155 HOH HOH A . I 7 HOH 157 1057 80 HOH HOH A . I 7 HOH 158 1058 151 HOH HOH A . I 7 HOH 159 1059 144 HOH HOH A . I 7 HOH 160 1060 98 HOH HOH A . I 7 HOH 161 1061 83 HOH HOH A . I 7 HOH 162 1062 149 HOH HOH A . I 7 HOH 163 1063 65 HOH HOH A . I 7 HOH 164 1064 174 HOH HOH A . I 7 HOH 165 1065 137 HOH HOH A . I 7 HOH 166 1066 94 HOH HOH A . I 7 HOH 167 1067 148 HOH HOH A . I 7 HOH 168 1068 108 HOH HOH A . I 7 HOH 169 1069 115 HOH HOH A . I 7 HOH 170 1070 175 HOH HOH A . I 7 HOH 171 1071 168 HOH HOH A . I 7 HOH 172 1072 132 HOH HOH A . I 7 HOH 173 1073 156 HOH HOH A . I 7 HOH 174 1074 164 HOH HOH A . I 7 HOH 175 1075 112 HOH HOH A . I 7 HOH 176 1076 96 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H,I 1 2 A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_559 -x+1/2,y+1/2,-z+4 -1.0000000000 0.0000000000 0.0000000000 -22.2823918462 0.0000000000 1.0000000000 0.0000000000 33.7700000000 0.0000000000 0.0000000000 -1.0000000000 212.7007105988 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 1064 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id I _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 111 ? A HIS 456 ? 1_555 ZN ? G ZN . ? A ZN 806 ? 1_555 NE2 ? A HIS 146 ? A HIS 491 ? 1_555 94.0 ? 2 NE2 ? A HIS 111 ? A HIS 456 ? 1_555 ZN ? G ZN . ? A ZN 806 ? 1_555 OD2 ? A ASP 147 ? A ASP 492 ? 1_555 94.3 ? 3 NE2 ? A HIS 146 ? A HIS 491 ? 1_555 ZN ? G ZN . ? A ZN 806 ? 1_555 OD2 ? A ASP 147 ? A ASP 492 ? 1_555 87.8 ? 4 NE2 ? A HIS 111 ? A HIS 456 ? 1_555 ZN ? G ZN . ? A ZN 806 ? 1_555 OD1 ? A ASP 260 ? A ASP 605 ? 1_555 89.6 ? 5 NE2 ? A HIS 146 ? A HIS 491 ? 1_555 ZN ? G ZN . ? A ZN 806 ? 1_555 OD1 ? A ASP 260 ? A ASP 605 ? 1_555 90.5 ? 6 OD2 ? A ASP 147 ? A ASP 492 ? 1_555 ZN ? G ZN . ? A ZN 806 ? 1_555 OD1 ? A ASP 260 ? A ASP 605 ? 1_555 175.9 ? 7 NE2 ? A HIS 111 ? A HIS 456 ? 1_555 ZN ? G ZN . ? A ZN 806 ? 1_555 O ? I HOH . ? A HOH 916 ? 1_555 169.7 ? 8 NE2 ? A HIS 146 ? A HIS 491 ? 1_555 ZN ? G ZN . ? A ZN 806 ? 1_555 O ? I HOH . ? A HOH 916 ? 1_555 96.3 ? 9 OD2 ? A ASP 147 ? A ASP 492 ? 1_555 ZN ? G ZN . ? A ZN 806 ? 1_555 O ? I HOH . ? A HOH 916 ? 1_555 85.5 ? 10 OD1 ? A ASP 260 ? A ASP 605 ? 1_555 ZN ? G ZN . ? A ZN 806 ? 1_555 O ? I HOH . ? A HOH 916 ? 1_555 91.0 ? 11 NE2 ? A HIS 111 ? A HIS 456 ? 1_555 ZN ? G ZN . ? A ZN 806 ? 1_555 O ? I HOH . ? A HOH 974 ? 1_555 87.1 ? 12 NE2 ? A HIS 146 ? A HIS 491 ? 1_555 ZN ? G ZN . ? A ZN 806 ? 1_555 O ? I HOH . ? A HOH 974 ? 1_555 178.6 ? 13 OD2 ? A ASP 147 ? A ASP 492 ? 1_555 ZN ? G ZN . ? A ZN 806 ? 1_555 O ? I HOH . ? A HOH 974 ? 1_555 92.9 ? 14 OD1 ? A ASP 260 ? A ASP 605 ? 1_555 ZN ? G ZN . ? A ZN 806 ? 1_555 O ? I HOH . ? A HOH 974 ? 1_555 88.7 ? 15 O ? I HOH . ? A HOH 916 ? 1_555 ZN ? G ZN . ? A ZN 806 ? 1_555 O ? I HOH . ? A HOH 974 ? 1_555 82.6 ? 16 OD1 ? A ASP 147 ? A ASP 492 ? 1_555 MG ? H MG . ? A MG 807 ? 1_555 O ? I HOH . ? A HOH 916 ? 1_555 97.8 ? 17 OD1 ? A ASP 147 ? A ASP 492 ? 1_555 MG ? H MG . ? A MG 807 ? 1_555 O ? I HOH . ? A HOH 917 ? 1_555 88.7 ? 18 O ? I HOH . ? A HOH 916 ? 1_555 MG ? H MG . ? A MG 807 ? 1_555 O ? I HOH . ? A HOH 917 ? 1_555 85.1 ? 19 OD1 ? A ASP 147 ? A ASP 492 ? 1_555 MG ? H MG . ? A MG 807 ? 1_555 O ? I HOH . ? A HOH 953 ? 1_555 94.8 ? 20 O ? I HOH . ? A HOH 916 ? 1_555 MG ? H MG . ? A MG 807 ? 1_555 O ? I HOH . ? A HOH 953 ? 1_555 86.4 ? 21 O ? I HOH . ? A HOH 917 ? 1_555 MG ? H MG . ? A MG 807 ? 1_555 O ? I HOH . ? A HOH 953 ? 1_555 171.1 ? 22 OD1 ? A ASP 147 ? A ASP 492 ? 1_555 MG ? H MG . ? A MG 807 ? 1_555 O ? I HOH . ? A HOH 954 ? 1_555 167.9 ? 23 O ? I HOH . ? A HOH 916 ? 1_555 MG ? H MG . ? A MG 807 ? 1_555 O ? I HOH . ? A HOH 954 ? 1_555 85.4 ? 24 O ? I HOH . ? A HOH 917 ? 1_555 MG ? H MG . ? A MG 807 ? 1_555 O ? I HOH . ? A HOH 954 ? 1_555 79.9 ? 25 O ? I HOH . ? A HOH 953 ? 1_555 MG ? H MG . ? A MG 807 ? 1_555 O ? I HOH . ? A HOH 954 ? 1_555 97.1 ? 26 OD1 ? A ASP 147 ? A ASP 492 ? 1_555 MG ? H MG . ? A MG 807 ? 1_555 O ? I HOH . ? A HOH 1003 ? 1_555 91.6 ? 27 O ? I HOH . ? A HOH 916 ? 1_555 MG ? H MG . ? A MG 807 ? 1_555 O ? I HOH . ? A HOH 1003 ? 1_555 168.9 ? 28 O ? I HOH . ? A HOH 917 ? 1_555 MG ? H MG . ? A MG 807 ? 1_555 O ? I HOH . ? A HOH 1003 ? 1_555 101.2 ? 29 O ? I HOH . ? A HOH 953 ? 1_555 MG ? H MG . ? A MG 807 ? 1_555 O ? I HOH . ? A HOH 1003 ? 1_555 86.9 ? 30 O ? I HOH . ? A HOH 954 ? 1_555 MG ? H MG . ? A MG 807 ? 1_555 O ? I HOH . ? A HOH 1003 ? 1_555 86.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-11-18 2 'Structure model' 1 1 2020-11-25 3 'Structure model' 1 2 2023-11-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.pdbx_database_id_PubMed' 5 2 'Structure model' '_citation.title' 6 3 'Structure model' '_database_2.pdbx_DOI' 7 3 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.14_3260: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_entry_details.entry_id 7D7P _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 919 ? ? O A HOH 1065 ? ? 1.99 2 1 O A HOH 970 ? ? O A HOH 1062 ? ? 2.05 3 1 O A HOH 974 ? ? O A HOH 1022 ? ? 2.09 4 1 O2 A EDO 805 ? ? O A HOH 901 ? ? 2.12 5 1 NH2 A ARG 646 ? ? O A HOH 902 ? ? 2.13 6 1 O A HOH 974 ? ? O A HOH 994 ? ? 2.14 7 1 OE2 A GLU 426 ? ? O A HOH 903 ? ? 2.16 8 1 O1 A EDO 803 ? ? O A HOH 904 ? ? 2.17 9 1 O A HOH 902 ? ? O A HOH 1006 ? ? 2.19 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 990 ? ? 1_555 O A HOH 1045 ? ? 4_559 1.89 2 1 OE2 A GLU 389 ? ? 1_555 NH2 A ARG 443 ? ? 4_5510 2.15 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 518 ? ? 35.43 59.40 2 1 ASN A 585 ? ? 53.64 70.68 3 1 VAL A 664 ? ? -122.14 -56.50 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 1076 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.82 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 380 ? CG ? A LYS 35 CG 2 1 Y 1 A LYS 380 ? CD ? A LYS 35 CD 3 1 Y 1 A LYS 380 ? CE ? A LYS 35 CE 4 1 Y 1 A LYS 380 ? NZ ? A LYS 35 NZ 5 1 Y 1 A HIS 382 ? CG ? A HIS 37 CG 6 1 Y 1 A HIS 382 ? ND1 ? A HIS 37 ND1 7 1 Y 1 A HIS 382 ? CD2 ? A HIS 37 CD2 8 1 Y 1 A HIS 382 ? CE1 ? A HIS 37 CE1 9 1 Y 1 A HIS 382 ? NE2 ? A HIS 37 NE2 10 1 Y 1 A SER 383 ? OG ? A SER 38 OG 11 1 Y 1 A LYS 390 ? CG ? A LYS 45 CG 12 1 Y 1 A LYS 390 ? CD ? A LYS 45 CD 13 1 Y 1 A LYS 390 ? CE ? A LYS 45 CE 14 1 Y 1 A LYS 390 ? NZ ? A LYS 45 NZ 15 1 Y 1 A GLU 409 ? CG ? A GLU 64 CG 16 1 Y 1 A GLU 409 ? CD ? A GLU 64 CD 17 1 Y 1 A GLU 409 ? OE1 ? A GLU 64 OE1 18 1 Y 1 A GLU 409 ? OE2 ? A GLU 64 OE2 19 1 Y 1 A GLN 420 ? CG ? A GLN 75 CG 20 1 Y 1 A GLN 420 ? CD ? A GLN 75 CD 21 1 Y 1 A GLN 420 ? OE1 ? A GLN 75 OE1 22 1 Y 1 A GLN 420 ? NE2 ? A GLN 75 NE2 23 1 Y 1 A LYS 448 ? CG ? A LYS 103 CG 24 1 Y 1 A LYS 448 ? CD ? A LYS 103 CD 25 1 Y 1 A LYS 448 ? CE ? A LYS 103 CE 26 1 Y 1 A LYS 448 ? NZ ? A LYS 103 NZ 27 1 Y 1 A LYS 535 ? CG ? A LYS 190 CG 28 1 Y 1 A LYS 535 ? CD ? A LYS 190 CD 29 1 Y 1 A LYS 535 ? CE ? A LYS 190 CE 30 1 Y 1 A LYS 535 ? NZ ? A LYS 190 NZ 31 1 Y 1 A GLU 545 ? CG ? A GLU 200 CG 32 1 Y 1 A GLU 545 ? CD ? A GLU 200 CD 33 1 Y 1 A GLU 545 ? OE1 ? A GLU 200 OE1 34 1 Y 1 A GLU 545 ? OE2 ? A GLU 200 OE2 35 1 Y 1 A ILE 584 ? CG1 ? A ILE 239 CG1 36 1 Y 1 A ILE 584 ? CG2 ? A ILE 239 CG2 37 1 Y 1 A ILE 584 ? CD1 ? A ILE 239 CD1 38 1 Y 1 A GLU 588 ? CG ? A GLU 243 CG 39 1 Y 1 A GLU 588 ? CD ? A GLU 243 CD 40 1 Y 1 A GLU 588 ? OE1 ? A GLU 243 OE1 41 1 Y 1 A GLU 588 ? OE2 ? A GLU 243 OE2 42 1 Y 1 A LYS 636 ? CG ? A LYS 291 CG 43 1 Y 1 A LYS 636 ? CD ? A LYS 291 CD 44 1 Y 1 A LYS 636 ? CE ? A LYS 291 CE 45 1 Y 1 A LYS 636 ? NZ ? A LYS 291 NZ 46 1 Y 1 A PHE 644 ? CG ? A PHE 299 CG 47 1 Y 1 A PHE 644 ? CD1 ? A PHE 299 CD1 48 1 Y 1 A PHE 644 ? CD2 ? A PHE 299 CD2 49 1 Y 1 A PHE 644 ? CE1 ? A PHE 299 CE1 50 1 Y 1 A PHE 644 ? CE2 ? A PHE 299 CE2 51 1 Y 1 A PHE 644 ? CZ ? A PHE 299 CZ 52 1 Y 1 A LYS 655 ? CG ? A LYS 310 CG 53 1 Y 1 A LYS 655 ? CD ? A LYS 310 CD 54 1 Y 1 A LYS 655 ? CE ? A LYS 310 CE 55 1 Y 1 A LYS 655 ? NZ ? A LYS 310 NZ 56 1 Y 1 A GLU 698 ? CG ? A GLU 353 CG 57 1 Y 1 A GLU 698 ? CD ? A GLU 353 CD 58 1 Y 1 A GLU 698 ? OE1 ? A GLU 353 OE1 59 1 Y 1 A GLU 698 ? OE2 ? A GLU 353 OE2 60 1 Y 1 A GLN 702 ? CG ? A GLN 357 CG 61 1 Y 1 A GLN 702 ? CD ? A GLN 357 CD 62 1 Y 1 A GLN 702 ? OE1 ? A GLN 357 OE1 63 1 Y 1 A GLN 702 ? NE2 ? A GLN 357 NE2 64 1 Y 1 A MET 703 ? CG ? A MET 358 CG 65 1 Y 1 A MET 703 ? SD ? A MET 358 SD 66 1 Y 1 A MET 703 ? CE ? A MET 358 CE 67 1 Y 1 A GLN 704 ? CG ? A GLN 359 CG 68 1 Y 1 A GLN 704 ? CD ? A GLN 359 CD 69 1 Y 1 A GLN 704 ? OE1 ? A GLN 359 OE1 70 1 Y 1 A GLN 704 ? NE2 ? A GLN 359 NE2 71 1 Y 1 A TYR 708 ? CG ? A TYR 363 CG 72 1 Y 1 A TYR 708 ? CD1 ? A TYR 363 CD1 73 1 Y 1 A TYR 708 ? CD2 ? A TYR 363 CD2 74 1 Y 1 A TYR 708 ? CE1 ? A TYR 363 CE1 75 1 Y 1 A TYR 708 ? CE2 ? A TYR 363 CE2 76 1 Y 1 A TYR 708 ? CZ ? A TYR 363 CZ 77 1 Y 1 A TYR 708 ? OH ? A TYR 363 OH 78 1 N 1 A 2PE 801 ? O1 ? B 2PE 1 O1 79 1 N 1 A 2PE 801 ? C2 ? B 2PE 1 C2 80 1 N 1 A 2PE 801 ? C3 ? B 2PE 1 C3 81 1 N 1 A 2PE 801 ? O4 ? B 2PE 1 O4 82 1 N 1 A 2PE 801 ? C5 ? B 2PE 1 C5 83 1 N 1 A 2PE 801 ? C6 ? B 2PE 1 C6 84 1 N 1 A 2PE 801 ? O7 ? B 2PE 1 O7 85 1 N 1 A 2PE 801 ? C8 ? B 2PE 1 C8 86 1 N 1 A 2PE 801 ? C9 ? B 2PE 1 C9 87 1 N 1 A PEG 802 ? C1 ? C PEG 1 C1 88 1 N 1 A PEG 802 ? O1 ? C PEG 1 O1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 346 ? A MET 1 2 1 Y 1 A ASP 347 ? A ASP 2 3 1 Y 1 A ASP 348 ? A ASP 3 4 1 Y 1 A ASP 349 ? A ASP 4 5 1 Y 1 A VAL 350 ? A VAL 5 6 1 Y 1 A LYS 351 ? A LYS 6 7 1 Y 1 A SER 352 ? A SER 7 8 1 Y 1 A TRP 353 ? A TRP 8 9 1 Y 1 A ILE 354 ? A ILE 9 10 1 Y 1 A MET 355 ? A MET 10 11 1 Y 1 A ASN 356 ? A ASN 11 12 1 Y 1 A GLU 357 ? A GLU 12 13 1 Y 1 A PHE 358 ? A PHE 13 14 1 Y 1 A SER 359 ? A SER 14 15 1 Y 1 A GLY 360 ? A GLY 15 16 1 Y 1 A SER 361 ? A SER 16 17 1 Y 1 A THR 362 ? A THR 17 18 1 Y 1 A ASP 363 ? A ASP 18 19 1 Y 1 A GLY 364 ? A GLY 19 20 1 Y 1 A LYS 365 ? A LYS 20 21 1 Y 1 A GLY 366 ? A GLY 21 22 1 Y 1 A GLY 367 ? A GLY 22 23 1 Y 1 A ASP 368 ? A ASP 23 24 1 Y 1 A ASP 369 ? A ASP 24 25 1 Y 1 A ALA 370 ? A ALA 25 26 1 Y 1 A LYS 371 ? A LYS 26 27 1 Y 1 A ALA 372 ? A ALA 27 28 1 Y 1 A GLN 373 ? A GLN 28 29 1 Y 1 A GLN 374 ? A GLN 29 30 1 Y 1 A ARG 375 ? A ARG 30 31 1 Y 1 A ALA 376 ? A ALA 31 32 1 Y 1 A ARG 377 ? A ARG 32 33 1 Y 1 A GLY 378 ? A GLY 33 34 1 Y 1 A ARG 379 ? A ARG 34 35 1 Y 1 A PHE 709 ? A PHE 364 36 1 Y 1 A GLN 710 ? A GLN 365 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 2PE O1 O N N 1 2PE C2 C N N 2 2PE C3 C N N 3 2PE O4 O N N 4 2PE C5 C N N 5 2PE C6 C N N 6 2PE O7 O N N 7 2PE C8 C N N 8 2PE C9 C N N 9 2PE O10 O N N 10 2PE C11 C N N 11 2PE C12 C N N 12 2PE O13 O N N 13 2PE C14 C N N 14 2PE C15 C N N 15 2PE O16 O N N 16 2PE C17 C N N 17 2PE C18 C N N 18 2PE O19 O N N 19 2PE C20 C N N 20 2PE C21 C N N 21 2PE O22 O N N 22 2PE C23 C N N 23 2PE C24 C N N 24 2PE O25 O N N 25 2PE C26 C N N 26 2PE C27 C N N 27 2PE O28 O N N 28 2PE HO1 H N N 29 2PE H21 H N N 30 2PE H22 H N N 31 2PE H31 H N N 32 2PE H32 H N N 33 2PE H51 H N N 34 2PE H52 H N N 35 2PE H61 H N N 36 2PE H62 H N N 37 2PE H81 H N N 38 2PE H82 H N N 39 2PE H91 H N N 40 2PE H92 H N N 41 2PE H111 H N N 42 2PE H112 H N N 43 2PE H121 H N N 44 2PE H122 H N N 45 2PE H141 H N N 46 2PE H142 H N N 47 2PE H151 H N N 48 2PE H152 H N N 49 2PE H171 H N N 50 2PE H172 H N N 51 2PE H181 H N N 52 2PE H182 H N N 53 2PE H201 H N N 54 2PE H202 H N N 55 2PE H211 H N N 56 2PE H212 H N N 57 2PE H231 H N N 58 2PE H232 H N N 59 2PE H241 H N N 60 2PE H242 H N N 61 2PE H261 H N N 62 2PE H262 H N N 63 2PE H271 H N N 64 2PE H272 H N N 65 2PE HO2 H N N 66 ALA N N N N 67 ALA CA C N S 68 ALA C C N N 69 ALA O O N N 70 ALA CB C N N 71 ALA OXT O N N 72 ALA H H N N 73 ALA H2 H N N 74 ALA HA H N N 75 ALA HB1 H N N 76 ALA HB2 H N N 77 ALA HB3 H N N 78 ALA HXT H N N 79 ARG N N N N 80 ARG CA C N S 81 ARG C C N N 82 ARG O O N N 83 ARG CB C N N 84 ARG CG C N N 85 ARG CD C N N 86 ARG NE N N N 87 ARG CZ C N N 88 ARG NH1 N N N 89 ARG NH2 N N N 90 ARG OXT O N N 91 ARG H H N N 92 ARG H2 H N N 93 ARG HA H N N 94 ARG HB2 H N N 95 ARG HB3 H N N 96 ARG HG2 H N N 97 ARG HG3 H N N 98 ARG HD2 H N N 99 ARG HD3 H N N 100 ARG HE H N N 101 ARG HH11 H N N 102 ARG HH12 H N N 103 ARG HH21 H N N 104 ARG HH22 H N N 105 ARG HXT H N N 106 ASN N N N N 107 ASN CA C N S 108 ASN C C N N 109 ASN O O N N 110 ASN CB C N N 111 ASN CG C N N 112 ASN OD1 O N N 113 ASN ND2 N N N 114 ASN OXT O N N 115 ASN H H N N 116 ASN H2 H N N 117 ASN HA H N N 118 ASN HB2 H N N 119 ASN HB3 H N N 120 ASN HD21 H N N 121 ASN HD22 H N N 122 ASN HXT H N N 123 ASP N N N N 124 ASP CA C N S 125 ASP C C N N 126 ASP O O N N 127 ASP CB C N N 128 ASP CG C N N 129 ASP OD1 O N N 130 ASP OD2 O N N 131 ASP OXT O N N 132 ASP H H N N 133 ASP H2 H N N 134 ASP HA H N N 135 ASP HB2 H N N 136 ASP HB3 H N N 137 ASP HD2 H N N 138 ASP HXT H N N 139 CYS N N N N 140 CYS CA C N R 141 CYS C C N N 142 CYS O O N N 143 CYS CB C N N 144 CYS SG S N N 145 CYS OXT O N N 146 CYS H H N N 147 CYS H2 H N N 148 CYS HA H N N 149 CYS HB2 H N N 150 CYS HB3 H N N 151 CYS HG H N N 152 CYS HXT H N N 153 EDO C1 C N N 154 EDO O1 O N N 155 EDO C2 C N N 156 EDO O2 O N N 157 EDO H11 H N N 158 EDO H12 H N N 159 EDO HO1 H N N 160 EDO H21 H N N 161 EDO H22 H N N 162 EDO HO2 H N N 163 GLN N N N N 164 GLN CA C N S 165 GLN C C N N 166 GLN O O N N 167 GLN CB C N N 168 GLN CG C N N 169 GLN CD C N N 170 GLN OE1 O N N 171 GLN NE2 N N N 172 GLN OXT O N N 173 GLN H H N N 174 GLN H2 H N N 175 GLN HA H N N 176 GLN HB2 H N N 177 GLN HB3 H N N 178 GLN HG2 H N N 179 GLN HG3 H N N 180 GLN HE21 H N N 181 GLN HE22 H N N 182 GLN HXT H N N 183 GLU N N N N 184 GLU CA C N S 185 GLU C C N N 186 GLU O O N N 187 GLU CB C N N 188 GLU CG C N N 189 GLU CD C N N 190 GLU OE1 O N N 191 GLU OE2 O N N 192 GLU OXT O N N 193 GLU H H N N 194 GLU H2 H N N 195 GLU HA H N N 196 GLU HB2 H N N 197 GLU HB3 H N N 198 GLU HG2 H N N 199 GLU HG3 H N N 200 GLU HE2 H N N 201 GLU HXT H N N 202 GLY N N N N 203 GLY CA C N N 204 GLY C C N N 205 GLY O O N N 206 GLY OXT O N N 207 GLY H H N N 208 GLY H2 H N N 209 GLY HA2 H N N 210 GLY HA3 H N N 211 GLY HXT H N N 212 HIS N N N N 213 HIS CA C N S 214 HIS C C N N 215 HIS O O N N 216 HIS CB C N N 217 HIS CG C Y N 218 HIS ND1 N Y N 219 HIS CD2 C Y N 220 HIS CE1 C Y N 221 HIS NE2 N Y N 222 HIS OXT O N N 223 HIS H H N N 224 HIS H2 H N N 225 HIS HA H N N 226 HIS HB2 H N N 227 HIS HB3 H N N 228 HIS HD1 H N N 229 HIS HD2 H N N 230 HIS HE1 H N N 231 HIS HE2 H N N 232 HIS HXT H N N 233 HOH O O N N 234 HOH H1 H N N 235 HOH H2 H N N 236 ILE N N N N 237 ILE CA C N S 238 ILE C C N N 239 ILE O O N N 240 ILE CB C N S 241 ILE CG1 C N N 242 ILE CG2 C N N 243 ILE CD1 C N N 244 ILE OXT O N N 245 ILE H H N N 246 ILE H2 H N N 247 ILE HA H N N 248 ILE HB H N N 249 ILE HG12 H N N 250 ILE HG13 H N N 251 ILE HG21 H N N 252 ILE HG22 H N N 253 ILE HG23 H N N 254 ILE HD11 H N N 255 ILE HD12 H N N 256 ILE HD13 H N N 257 ILE HXT H N N 258 LEU N N N N 259 LEU CA C N S 260 LEU C C N N 261 LEU O O N N 262 LEU CB C N N 263 LEU CG C N N 264 LEU CD1 C N N 265 LEU CD2 C N N 266 LEU OXT O N N 267 LEU H H N N 268 LEU H2 H N N 269 LEU HA H N N 270 LEU HB2 H N N 271 LEU HB3 H N N 272 LEU HG H N N 273 LEU HD11 H N N 274 LEU HD12 H N N 275 LEU HD13 H N N 276 LEU HD21 H N N 277 LEU HD22 H N N 278 LEU HD23 H N N 279 LEU HXT H N N 280 LYS N N N N 281 LYS CA C N S 282 LYS C C N N 283 LYS O O N N 284 LYS CB C N N 285 LYS CG C N N 286 LYS CD C N N 287 LYS CE C N N 288 LYS NZ N N N 289 LYS OXT O N N 290 LYS H H N N 291 LYS H2 H N N 292 LYS HA H N N 293 LYS HB2 H N N 294 LYS HB3 H N N 295 LYS HG2 H N N 296 LYS HG3 H N N 297 LYS HD2 H N N 298 LYS HD3 H N N 299 LYS HE2 H N N 300 LYS HE3 H N N 301 LYS HZ1 H N N 302 LYS HZ2 H N N 303 LYS HZ3 H N N 304 LYS HXT H N N 305 MET N N N N 306 MET CA C N S 307 MET C C N N 308 MET O O N N 309 MET CB C N N 310 MET CG C N N 311 MET SD S N N 312 MET CE C N N 313 MET OXT O N N 314 MET H H N N 315 MET H2 H N N 316 MET HA H N N 317 MET HB2 H N N 318 MET HB3 H N N 319 MET HG2 H N N 320 MET HG3 H N N 321 MET HE1 H N N 322 MET HE2 H N N 323 MET HE3 H N N 324 MET HXT H N N 325 MG MG MG N N 326 PEG C1 C N N 327 PEG O1 O N N 328 PEG C2 C N N 329 PEG O2 O N N 330 PEG C3 C N N 331 PEG C4 C N N 332 PEG O4 O N N 333 PEG H11 H N N 334 PEG H12 H N N 335 PEG HO1 H N N 336 PEG H21 H N N 337 PEG H22 H N N 338 PEG H31 H N N 339 PEG H32 H N N 340 PEG H41 H N N 341 PEG H42 H N N 342 PEG HO4 H N N 343 PHE N N N N 344 PHE CA C N S 345 PHE C C N N 346 PHE O O N N 347 PHE CB C N N 348 PHE CG C Y N 349 PHE CD1 C Y N 350 PHE CD2 C Y N 351 PHE CE1 C Y N 352 PHE CE2 C Y N 353 PHE CZ C Y N 354 PHE OXT O N N 355 PHE H H N N 356 PHE H2 H N N 357 PHE HA H N N 358 PHE HB2 H N N 359 PHE HB3 H N N 360 PHE HD1 H N N 361 PHE HD2 H N N 362 PHE HE1 H N N 363 PHE HE2 H N N 364 PHE HZ H N N 365 PHE HXT H N N 366 PRO N N N N 367 PRO CA C N S 368 PRO C C N N 369 PRO O O N N 370 PRO CB C N N 371 PRO CG C N N 372 PRO CD C N N 373 PRO OXT O N N 374 PRO H H N N 375 PRO HA H N N 376 PRO HB2 H N N 377 PRO HB3 H N N 378 PRO HG2 H N N 379 PRO HG3 H N N 380 PRO HD2 H N N 381 PRO HD3 H N N 382 PRO HXT H N N 383 SER N N N N 384 SER CA C N S 385 SER C C N N 386 SER O O N N 387 SER CB C N N 388 SER OG O N N 389 SER OXT O N N 390 SER H H N N 391 SER H2 H N N 392 SER HA H N N 393 SER HB2 H N N 394 SER HB3 H N N 395 SER HG H N N 396 SER HXT H N N 397 THR N N N N 398 THR CA C N S 399 THR C C N N 400 THR O O N N 401 THR CB C N R 402 THR OG1 O N N 403 THR CG2 C N N 404 THR OXT O N N 405 THR H H N N 406 THR H2 H N N 407 THR HA H N N 408 THR HB H N N 409 THR HG1 H N N 410 THR HG21 H N N 411 THR HG22 H N N 412 THR HG23 H N N 413 THR HXT H N N 414 TRP N N N N 415 TRP CA C N S 416 TRP C C N N 417 TRP O O N N 418 TRP CB C N N 419 TRP CG C Y N 420 TRP CD1 C Y N 421 TRP CD2 C Y N 422 TRP NE1 N Y N 423 TRP CE2 C Y N 424 TRP CE3 C Y N 425 TRP CZ2 C Y N 426 TRP CZ3 C Y N 427 TRP CH2 C Y N 428 TRP OXT O N N 429 TRP H H N N 430 TRP H2 H N N 431 TRP HA H N N 432 TRP HB2 H N N 433 TRP HB3 H N N 434 TRP HD1 H N N 435 TRP HE1 H N N 436 TRP HE3 H N N 437 TRP HZ2 H N N 438 TRP HZ3 H N N 439 TRP HH2 H N N 440 TRP HXT H N N 441 TYR N N N N 442 TYR CA C N S 443 TYR C C N N 444 TYR O O N N 445 TYR CB C N N 446 TYR CG C Y N 447 TYR CD1 C Y N 448 TYR CD2 C Y N 449 TYR CE1 C Y N 450 TYR CE2 C Y N 451 TYR CZ C Y N 452 TYR OH O N N 453 TYR OXT O N N 454 TYR H H N N 455 TYR H2 H N N 456 TYR HA H N N 457 TYR HB2 H N N 458 TYR HB3 H N N 459 TYR HD1 H N N 460 TYR HD2 H N N 461 TYR HE1 H N N 462 TYR HE2 H N N 463 TYR HH H N N 464 TYR HXT H N N 465 VAL N N N N 466 VAL CA C N S 467 VAL C C N N 468 VAL O O N N 469 VAL CB C N N 470 VAL CG1 C N N 471 VAL CG2 C N N 472 VAL OXT O N N 473 VAL H H N N 474 VAL H2 H N N 475 VAL HA H N N 476 VAL HB H N N 477 VAL HG11 H N N 478 VAL HG12 H N N 479 VAL HG13 H N N 480 VAL HG21 H N N 481 VAL HG22 H N N 482 VAL HG23 H N N 483 VAL HXT H N N 484 ZN ZN ZN N N 485 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2PE O1 C2 sing N N 1 2PE O1 HO1 sing N N 2 2PE C2 C3 sing N N 3 2PE C2 H21 sing N N 4 2PE C2 H22 sing N N 5 2PE C3 O4 sing N N 6 2PE C3 H31 sing N N 7 2PE C3 H32 sing N N 8 2PE O4 C5 sing N N 9 2PE C5 C6 sing N N 10 2PE C5 H51 sing N N 11 2PE C5 H52 sing N N 12 2PE C6 O7 sing N N 13 2PE C6 H61 sing N N 14 2PE C6 H62 sing N N 15 2PE O7 C8 sing N N 16 2PE C8 C9 sing N N 17 2PE C8 H81 sing N N 18 2PE C8 H82 sing N N 19 2PE C9 O10 sing N N 20 2PE C9 H91 sing N N 21 2PE C9 H92 sing N N 22 2PE O10 C11 sing N N 23 2PE C11 C12 sing N N 24 2PE C11 H111 sing N N 25 2PE C11 H112 sing N N 26 2PE C12 O13 sing N N 27 2PE C12 H121 sing N N 28 2PE C12 H122 sing N N 29 2PE O13 C14 sing N N 30 2PE C14 C15 sing N N 31 2PE C14 H141 sing N N 32 2PE C14 H142 sing N N 33 2PE C15 O16 sing N N 34 2PE C15 H151 sing N N 35 2PE C15 H152 sing N N 36 2PE O16 C17 sing N N 37 2PE C17 C18 sing N N 38 2PE C17 H171 sing N N 39 2PE C17 H172 sing N N 40 2PE C18 O19 sing N N 41 2PE C18 H181 sing N N 42 2PE C18 H182 sing N N 43 2PE O19 C20 sing N N 44 2PE C20 C21 sing N N 45 2PE C20 H201 sing N N 46 2PE C20 H202 sing N N 47 2PE C21 O22 sing N N 48 2PE C21 H211 sing N N 49 2PE C21 H212 sing N N 50 2PE O22 C23 sing N N 51 2PE C23 C24 sing N N 52 2PE C23 H231 sing N N 53 2PE C23 H232 sing N N 54 2PE C24 O25 sing N N 55 2PE C24 H241 sing N N 56 2PE C24 H242 sing N N 57 2PE O25 C26 sing N N 58 2PE C26 C27 sing N N 59 2PE C26 H261 sing N N 60 2PE C26 H262 sing N N 61 2PE C27 O28 sing N N 62 2PE C27 H271 sing N N 63 2PE C27 H272 sing N N 64 2PE O28 HO2 sing N N 65 ALA N CA sing N N 66 ALA N H sing N N 67 ALA N H2 sing N N 68 ALA CA C sing N N 69 ALA CA CB sing N N 70 ALA CA HA sing N N 71 ALA C O doub N N 72 ALA C OXT sing N N 73 ALA CB HB1 sing N N 74 ALA CB HB2 sing N N 75 ALA CB HB3 sing N N 76 ALA OXT HXT sing N N 77 ARG N CA sing N N 78 ARG N H sing N N 79 ARG N H2 sing N N 80 ARG CA C sing N N 81 ARG CA CB sing N N 82 ARG CA HA sing N N 83 ARG C O doub N N 84 ARG C OXT sing N N 85 ARG CB CG sing N N 86 ARG CB HB2 sing N N 87 ARG CB HB3 sing N N 88 ARG CG CD sing N N 89 ARG CG HG2 sing N N 90 ARG CG HG3 sing N N 91 ARG CD NE sing N N 92 ARG CD HD2 sing N N 93 ARG CD HD3 sing N N 94 ARG NE CZ sing N N 95 ARG NE HE sing N N 96 ARG CZ NH1 sing N N 97 ARG CZ NH2 doub N N 98 ARG NH1 HH11 sing N N 99 ARG NH1 HH12 sing N N 100 ARG NH2 HH21 sing N N 101 ARG NH2 HH22 sing N N 102 ARG OXT HXT sing N N 103 ASN N CA sing N N 104 ASN N H sing N N 105 ASN N H2 sing N N 106 ASN CA C sing N N 107 ASN CA CB sing N N 108 ASN CA HA sing N N 109 ASN C O doub N N 110 ASN C OXT sing N N 111 ASN CB CG sing N N 112 ASN CB HB2 sing N N 113 ASN CB HB3 sing N N 114 ASN CG OD1 doub N N 115 ASN CG ND2 sing N N 116 ASN ND2 HD21 sing N N 117 ASN ND2 HD22 sing N N 118 ASN OXT HXT sing N N 119 ASP N CA sing N N 120 ASP N H sing N N 121 ASP N H2 sing N N 122 ASP CA C sing N N 123 ASP CA CB sing N N 124 ASP CA HA sing N N 125 ASP C O doub N N 126 ASP C OXT sing N N 127 ASP CB CG sing N N 128 ASP CB HB2 sing N N 129 ASP CB HB3 sing N N 130 ASP CG OD1 doub N N 131 ASP CG OD2 sing N N 132 ASP OD2 HD2 sing N N 133 ASP OXT HXT sing N N 134 CYS N CA sing N N 135 CYS N H sing N N 136 CYS N H2 sing N N 137 CYS CA C sing N N 138 CYS CA CB sing N N 139 CYS CA HA sing N N 140 CYS C O doub N N 141 CYS C OXT sing N N 142 CYS CB SG sing N N 143 CYS CB HB2 sing N N 144 CYS CB HB3 sing N N 145 CYS SG HG sing N N 146 CYS OXT HXT sing N N 147 EDO C1 O1 sing N N 148 EDO C1 C2 sing N N 149 EDO C1 H11 sing N N 150 EDO C1 H12 sing N N 151 EDO O1 HO1 sing N N 152 EDO C2 O2 sing N N 153 EDO C2 H21 sing N N 154 EDO C2 H22 sing N N 155 EDO O2 HO2 sing N N 156 GLN N CA sing N N 157 GLN N H sing N N 158 GLN N H2 sing N N 159 GLN CA C sing N N 160 GLN CA CB sing N N 161 GLN CA HA sing N N 162 GLN C O doub N N 163 GLN C OXT sing N N 164 GLN CB CG sing N N 165 GLN CB HB2 sing N N 166 GLN CB HB3 sing N N 167 GLN CG CD sing N N 168 GLN CG HG2 sing N N 169 GLN CG HG3 sing N N 170 GLN CD OE1 doub N N 171 GLN CD NE2 sing N N 172 GLN NE2 HE21 sing N N 173 GLN NE2 HE22 sing N N 174 GLN OXT HXT sing N N 175 GLU N CA sing N N 176 GLU N H sing N N 177 GLU N H2 sing N N 178 GLU CA C sing N N 179 GLU CA CB sing N N 180 GLU CA HA sing N N 181 GLU C O doub N N 182 GLU C OXT sing N N 183 GLU CB CG sing N N 184 GLU CB HB2 sing N N 185 GLU CB HB3 sing N N 186 GLU CG CD sing N N 187 GLU CG HG2 sing N N 188 GLU CG HG3 sing N N 189 GLU CD OE1 doub N N 190 GLU CD OE2 sing N N 191 GLU OE2 HE2 sing N N 192 GLU OXT HXT sing N N 193 GLY N CA sing N N 194 GLY N H sing N N 195 GLY N H2 sing N N 196 GLY CA C sing N N 197 GLY CA HA2 sing N N 198 GLY CA HA3 sing N N 199 GLY C O doub N N 200 GLY C OXT sing N N 201 GLY OXT HXT sing N N 202 HIS N CA sing N N 203 HIS N H sing N N 204 HIS N H2 sing N N 205 HIS CA C sing N N 206 HIS CA CB sing N N 207 HIS CA HA sing N N 208 HIS C O doub N N 209 HIS C OXT sing N N 210 HIS CB CG sing N N 211 HIS CB HB2 sing N N 212 HIS CB HB3 sing N N 213 HIS CG ND1 sing Y N 214 HIS CG CD2 doub Y N 215 HIS ND1 CE1 doub Y N 216 HIS ND1 HD1 sing N N 217 HIS CD2 NE2 sing Y N 218 HIS CD2 HD2 sing N N 219 HIS CE1 NE2 sing Y N 220 HIS CE1 HE1 sing N N 221 HIS NE2 HE2 sing N N 222 HIS OXT HXT sing N N 223 HOH O H1 sing N N 224 HOH O H2 sing N N 225 ILE N CA sing N N 226 ILE N H sing N N 227 ILE N H2 sing N N 228 ILE CA C sing N N 229 ILE CA CB sing N N 230 ILE CA HA sing N N 231 ILE C O doub N N 232 ILE C OXT sing N N 233 ILE CB CG1 sing N N 234 ILE CB CG2 sing N N 235 ILE CB HB sing N N 236 ILE CG1 CD1 sing N N 237 ILE CG1 HG12 sing N N 238 ILE CG1 HG13 sing N N 239 ILE CG2 HG21 sing N N 240 ILE CG2 HG22 sing N N 241 ILE CG2 HG23 sing N N 242 ILE CD1 HD11 sing N N 243 ILE CD1 HD12 sing N N 244 ILE CD1 HD13 sing N N 245 ILE OXT HXT sing N N 246 LEU N CA sing N N 247 LEU N H sing N N 248 LEU N H2 sing N N 249 LEU CA C sing N N 250 LEU CA CB sing N N 251 LEU CA HA sing N N 252 LEU C O doub N N 253 LEU C OXT sing N N 254 LEU CB CG sing N N 255 LEU CB HB2 sing N N 256 LEU CB HB3 sing N N 257 LEU CG CD1 sing N N 258 LEU CG CD2 sing N N 259 LEU CG HG sing N N 260 LEU CD1 HD11 sing N N 261 LEU CD1 HD12 sing N N 262 LEU CD1 HD13 sing N N 263 LEU CD2 HD21 sing N N 264 LEU CD2 HD22 sing N N 265 LEU CD2 HD23 sing N N 266 LEU OXT HXT sing N N 267 LYS N CA sing N N 268 LYS N H sing N N 269 LYS N H2 sing N N 270 LYS CA C sing N N 271 LYS CA CB sing N N 272 LYS CA HA sing N N 273 LYS C O doub N N 274 LYS C OXT sing N N 275 LYS CB CG sing N N 276 LYS CB HB2 sing N N 277 LYS CB HB3 sing N N 278 LYS CG CD sing N N 279 LYS CG HG2 sing N N 280 LYS CG HG3 sing N N 281 LYS CD CE sing N N 282 LYS CD HD2 sing N N 283 LYS CD HD3 sing N N 284 LYS CE NZ sing N N 285 LYS CE HE2 sing N N 286 LYS CE HE3 sing N N 287 LYS NZ HZ1 sing N N 288 LYS NZ HZ2 sing N N 289 LYS NZ HZ3 sing N N 290 LYS OXT HXT sing N N 291 MET N CA sing N N 292 MET N H sing N N 293 MET N H2 sing N N 294 MET CA C sing N N 295 MET CA CB sing N N 296 MET CA HA sing N N 297 MET C O doub N N 298 MET C OXT sing N N 299 MET CB CG sing N N 300 MET CB HB2 sing N N 301 MET CB HB3 sing N N 302 MET CG SD sing N N 303 MET CG HG2 sing N N 304 MET CG HG3 sing N N 305 MET SD CE sing N N 306 MET CE HE1 sing N N 307 MET CE HE2 sing N N 308 MET CE HE3 sing N N 309 MET OXT HXT sing N N 310 PEG C1 O1 sing N N 311 PEG C1 C2 sing N N 312 PEG C1 H11 sing N N 313 PEG C1 H12 sing N N 314 PEG O1 HO1 sing N N 315 PEG C2 O2 sing N N 316 PEG C2 H21 sing N N 317 PEG C2 H22 sing N N 318 PEG O2 C3 sing N N 319 PEG C3 C4 sing N N 320 PEG C3 H31 sing N N 321 PEG C3 H32 sing N N 322 PEG C4 O4 sing N N 323 PEG C4 H41 sing N N 324 PEG C4 H42 sing N N 325 PEG O4 HO4 sing N N 326 PHE N CA sing N N 327 PHE N H sing N N 328 PHE N H2 sing N N 329 PHE CA C sing N N 330 PHE CA CB sing N N 331 PHE CA HA sing N N 332 PHE C O doub N N 333 PHE C OXT sing N N 334 PHE CB CG sing N N 335 PHE CB HB2 sing N N 336 PHE CB HB3 sing N N 337 PHE CG CD1 doub Y N 338 PHE CG CD2 sing Y N 339 PHE CD1 CE1 sing Y N 340 PHE CD1 HD1 sing N N 341 PHE CD2 CE2 doub Y N 342 PHE CD2 HD2 sing N N 343 PHE CE1 CZ doub Y N 344 PHE CE1 HE1 sing N N 345 PHE CE2 CZ sing Y N 346 PHE CE2 HE2 sing N N 347 PHE CZ HZ sing N N 348 PHE OXT HXT sing N N 349 PRO N CA sing N N 350 PRO N CD sing N N 351 PRO N H sing N N 352 PRO CA C sing N N 353 PRO CA CB sing N N 354 PRO CA HA sing N N 355 PRO C O doub N N 356 PRO C OXT sing N N 357 PRO CB CG sing N N 358 PRO CB HB2 sing N N 359 PRO CB HB3 sing N N 360 PRO CG CD sing N N 361 PRO CG HG2 sing N N 362 PRO CG HG3 sing N N 363 PRO CD HD2 sing N N 364 PRO CD HD3 sing N N 365 PRO OXT HXT sing N N 366 SER N CA sing N N 367 SER N H sing N N 368 SER N H2 sing N N 369 SER CA C sing N N 370 SER CA CB sing N N 371 SER CA HA sing N N 372 SER C O doub N N 373 SER C OXT sing N N 374 SER CB OG sing N N 375 SER CB HB2 sing N N 376 SER CB HB3 sing N N 377 SER OG HG sing N N 378 SER OXT HXT sing N N 379 THR N CA sing N N 380 THR N H sing N N 381 THR N H2 sing N N 382 THR CA C sing N N 383 THR CA CB sing N N 384 THR CA HA sing N N 385 THR C O doub N N 386 THR C OXT sing N N 387 THR CB OG1 sing N N 388 THR CB CG2 sing N N 389 THR CB HB sing N N 390 THR OG1 HG1 sing N N 391 THR CG2 HG21 sing N N 392 THR CG2 HG22 sing N N 393 THR CG2 HG23 sing N N 394 THR OXT HXT sing N N 395 TRP N CA sing N N 396 TRP N H sing N N 397 TRP N H2 sing N N 398 TRP CA C sing N N 399 TRP CA CB sing N N 400 TRP CA HA sing N N 401 TRP C O doub N N 402 TRP C OXT sing N N 403 TRP CB CG sing N N 404 TRP CB HB2 sing N N 405 TRP CB HB3 sing N N 406 TRP CG CD1 doub Y N 407 TRP CG CD2 sing Y N 408 TRP CD1 NE1 sing Y N 409 TRP CD1 HD1 sing N N 410 TRP CD2 CE2 doub Y N 411 TRP CD2 CE3 sing Y N 412 TRP NE1 CE2 sing Y N 413 TRP NE1 HE1 sing N N 414 TRP CE2 CZ2 sing Y N 415 TRP CE3 CZ3 doub Y N 416 TRP CE3 HE3 sing N N 417 TRP CZ2 CH2 doub Y N 418 TRP CZ2 HZ2 sing N N 419 TRP CZ3 CH2 sing Y N 420 TRP CZ3 HZ3 sing N N 421 TRP CH2 HH2 sing N N 422 TRP OXT HXT sing N N 423 TYR N CA sing N N 424 TYR N H sing N N 425 TYR N H2 sing N N 426 TYR CA C sing N N 427 TYR CA CB sing N N 428 TYR CA HA sing N N 429 TYR C O doub N N 430 TYR C OXT sing N N 431 TYR CB CG sing N N 432 TYR CB HB2 sing N N 433 TYR CB HB3 sing N N 434 TYR CG CD1 doub Y N 435 TYR CG CD2 sing Y N 436 TYR CD1 CE1 sing Y N 437 TYR CD1 HD1 sing N N 438 TYR CD2 CE2 doub Y N 439 TYR CD2 HD2 sing N N 440 TYR CE1 CZ doub Y N 441 TYR CE1 HE1 sing N N 442 TYR CE2 CZ sing Y N 443 TYR CE2 HE2 sing N N 444 TYR CZ OH sing N N 445 TYR OH HH sing N N 446 TYR OXT HXT sing N N 447 VAL N CA sing N N 448 VAL N H sing N N 449 VAL N H2 sing N N 450 VAL CA C sing N N 451 VAL CA CB sing N N 452 VAL CA HA sing N N 453 VAL C O doub N N 454 VAL C OXT sing N N 455 VAL CB CG1 sing N N 456 VAL CB CG2 sing N N 457 VAL CB HB sing N N 458 VAL CG1 HG11 sing N N 459 VAL CG1 HG12 sing N N 460 VAL CG1 HG13 sing N N 461 VAL CG2 HG21 sing N N 462 VAL CG2 HG22 sing N N 463 VAL CG2 HG23 sing N N 464 VAL OXT HXT sing N N 465 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'NONAETHYLENE GLYCOL' 2PE 3 'DI(HYDROXYETHYL)ETHER' PEG 4 1,2-ETHANEDIOL EDO 5 'ZINC ION' ZN 6 'MAGNESIUM ION' MG 7 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5VYD _pdbx_initial_refinement_model.details ? # _pdbx_related_exp_data_set.data_reference 10.5281/zenodo.4080668 _pdbx_related_exp_data_set.data_set_type 'diffraction image data' _pdbx_related_exp_data_set.details ? _pdbx_related_exp_data_set.metadata_reference ? _pdbx_related_exp_data_set.ordinal 1 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #