HEADER TRANSFERASE 08-OCT-20 7D8E TITLE CRYSTAL STRUCTURE OF DOUBLE MUTANT Y115E Y117E HUMAN SECRETORY TITLE 2 GLUTAMINYL CYCLASE IN COMPLEX WITH LSB-09 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTAMINYL-PEPTIDE CYCLOTRANSFERASE; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: GLUTAMINYL CYCLASE,SQC,GLUTAMINYL-TRNA CYCLOTRANSFERASE, COMPND 5 GLUTAMYL CYCLASE,EC; COMPND 6 EC: 2.3.2.5; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 OTHER_DETAILS: CPD-09 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: QPCT; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS GLUTAMINYL-PEPTIDE CYCLOTRANSFERASE, SQC, ALZHEIMER'S DISEASE, KEYWDS 2 PYROGLUTAMATE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.V.DILEEP,K.IHARA,N.SAKAI,M.SHIROZU,K.Y.J.ZHANG REVDAT 2 29-NOV-23 7D8E 1 REMARK REVDAT 1 08-DEC-21 7D8E 0 JRNL AUTH K.V.DILEEP,K.IHARA,N.SAKAI,M.SHIROZU,K.Y.J.ZHANG JRNL TITL CRYSTAL STRUCTURE OF DOUBLE MUTANT Y115E Y117E HUMAN JRNL TITL 2 SECRETORY GLUTAMINYL CYCLASE IN COMPLEX WITH LSB-09 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.85 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 79674 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.140 REMARK 3 FREE R VALUE TEST SET COUNT : 4097 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.8500 - 6.1402 1.00 2622 176 0.2086 0.2086 REMARK 3 2 6.1402 - 4.8753 1.00 2678 107 0.2089 0.2830 REMARK 3 3 4.8753 - 4.2595 1.00 2610 135 0.1828 0.2162 REMARK 3 4 4.2595 - 3.8703 1.00 2611 150 0.1964 0.2136 REMARK 3 5 3.8703 - 3.5930 1.00 2561 200 0.2060 0.2582 REMARK 3 6 3.5930 - 3.3812 1.00 2605 158 0.2146 0.2541 REMARK 3 7 3.3812 - 3.2119 1.00 2559 166 0.2221 0.2397 REMARK 3 8 3.2119 - 3.0721 1.00 2620 134 0.2230 0.2689 REMARK 3 9 3.0721 - 2.9539 1.00 2616 130 0.2286 0.2784 REMARK 3 10 2.9539 - 2.8520 1.00 2618 137 0.2148 0.2725 REMARK 3 11 2.8520 - 2.7628 1.00 2600 152 0.2157 0.2878 REMARK 3 12 2.7628 - 2.6838 1.00 2599 134 0.2188 0.2740 REMARK 3 13 2.6838 - 2.6132 1.00 2596 136 0.2191 0.2420 REMARK 3 14 2.6132 - 2.5494 1.00 2628 153 0.2090 0.2470 REMARK 3 15 2.5494 - 2.4915 1.00 2581 152 0.1961 0.2481 REMARK 3 16 2.4915 - 2.4385 1.00 2607 146 0.2104 0.2437 REMARK 3 17 2.4385 - 2.3897 1.00 2590 140 0.2047 0.2772 REMARK 3 18 2.3897 - 2.3446 1.00 2636 120 0.2043 0.2549 REMARK 3 19 2.3446 - 2.3027 1.00 2608 124 0.1980 0.2478 REMARK 3 20 2.3027 - 2.2637 1.00 2574 147 0.1977 0.2475 REMARK 3 21 2.2637 - 2.2272 1.00 2650 127 0.1950 0.2602 REMARK 3 22 2.2272 - 2.1929 1.00 2608 125 0.1987 0.2602 REMARK 3 23 2.1929 - 2.1607 1.00 2574 138 0.2107 0.2886 REMARK 3 24 2.1607 - 2.1302 1.00 2601 130 0.2015 0.2405 REMARK 3 25 2.1302 - 2.1014 1.00 2603 130 0.2036 0.2573 REMARK 3 26 2.1014 - 2.0742 1.00 2648 149 0.2127 0.2881 REMARK 3 27 2.0742 - 2.0482 1.00 2615 107 0.2211 0.2606 REMARK 3 28 2.0482 - 2.0235 1.00 2604 140 0.2161 0.3031 REMARK 3 29 2.0235 - 2.0000 1.00 2555 154 0.2240 0.2883 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.050 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.019 8248 REMARK 3 ANGLE : 1.237 11259 REMARK 3 CHIRALITY : 0.078 1191 REMARK 3 PLANARITY : 0.006 1464 REMARK 3 DIHEDRAL : 13.029 3015 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7D8E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-OCT-20. REMARK 100 THE DEPOSITION ID IS D_1300018792. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-NOV-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0-6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.21 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 79687 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 46.850 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : 0.12600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.04 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.60 REMARK 200 R MERGE FOR SHELL (I) : 0.51700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.6.1 REMARK 200 STARTING MODEL: 4YWY REMARK 200 REMARK 200 REMARK: HEXAGONAL PLATE LIKE CRYSTALS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MES BUFFER PH 6.0-6.5, 46-67 MM REMARK 280 NAOH, 100 MM AMMONIUM SULFATE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 43.09050 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 74.65150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 43.09050 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 74.65150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1121 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1215 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 33 REMARK 465 SER A 34 REMARK 465 TRP A 149 REMARK 465 ASN A 150 REMARK 465 THR A 183 REMARK 465 VAL A 184 REMARK 465 SER A 185 REMARK 465 ASP A 186 REMARK 465 SER A 187 REMARK 465 LYS A 188 REMARK 465 PRO A 189 REMARK 465 ALA B 33 REMARK 465 SER B 34 REMARK 465 TRP B 149 REMARK 465 ASN B 150 REMARK 465 THR B 183 REMARK 465 VAL B 184 REMARK 465 SER B 185 REMARK 465 ASP B 186 REMARK 465 SER B 187 REMARK 465 LYS B 188 REMARK 465 PRO B 189 REMARK 465 ALA C 33 REMARK 465 SER C 34 REMARK 465 TRP C 149 REMARK 465 ASN C 150 REMARK 465 THR C 183 REMARK 465 VAL C 184 REMARK 465 SER C 185 REMARK 465 ASP C 186 REMARK 465 SER C 187 REMARK 465 LYS C 188 REMARK 465 PRO C 189 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 55 CD OE1 NE2 REMARK 470 ASN A 151 CG OD1 ND2 REMARK 470 LYS A 182 CG CD CE NZ REMARK 470 ASP A 190 CG OD1 OD2 REMARK 470 LEU A 205 CG CD1 CD2 REMARK 470 HIS A 206 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 222 CE NZ REMARK 470 ARG A 233 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 269 CG CD OE1 OE2 REMARK 470 GLU A 290 CG CD OE1 OE2 REMARK 470 ARG A 292 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 302 CG1 CG2 REMARK 470 ASN B 151 CG OD1 ND2 REMARK 470 LYS B 176 CG CD CE NZ REMARK 470 HIS B 206 CG ND1 CD2 CE1 NE2 REMARK 470 ARG B 233 CD NE CZ NH1 NH2 REMARK 470 LYS B 285 CG CD CE NZ REMARK 470 ARG B 292 NE CZ NH1 NH2 REMARK 470 VAL B 302 CG1 CG2 REMARK 470 GLU C 105 CG CD OE1 OE2 REMARK 470 ASN C 151 CG OD1 ND2 REMARK 470 LYS C 176 CG CD CE NZ REMARK 470 LYS C 177 NZ REMARK 470 GLN C 210 CG CD OE1 NE2 REMARK 470 ARG C 233 CZ NH1 NH2 REMARK 470 LYS C 285 CE NZ REMARK 470 ARG C 292 CG CD NE CZ NH1 NH2 REMARK 470 SER C 298 OG REMARK 470 VAL C 302 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 77 42.85 -146.11 REMARK 500 SER A 192 -159.62 -138.06 REMARK 500 LEU A 205 -62.48 -130.62 REMARK 500 ASP A 211 62.50 -114.78 REMARK 500 ARG B 77 46.86 -144.17 REMARK 500 SER B 192 -156.77 -138.74 REMARK 500 LEU B 205 -87.00 -123.39 REMARK 500 ASP B 211 64.56 -119.86 REMARK 500 LEU B 243 136.59 -171.12 REMARK 500 ARG C 77 48.02 -144.02 REMARK 500 SER C 192 -158.51 -137.59 REMARK 500 LEU C 205 -65.46 -125.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1000 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 159 OD2 REMARK 620 2 GLU A 202 OE2 101.1 REMARK 620 3 HIS A 330 NE2 101.4 120.4 REMARK 620 4 GYO A1008 N03 103.4 105.5 121.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1000 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 159 OD2 REMARK 620 2 GLU B 202 OE2 94.8 REMARK 620 3 HIS B 330 NE2 99.8 120.5 REMARK 620 4 GYO B1006 N03 106.6 108.5 121.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C1000 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 159 OD2 REMARK 620 2 GLU C 202 OE2 100.4 REMARK 620 3 HIS C 330 NE2 98.6 117.7 REMARK 620 4 GYO C1005 N03 107.3 108.8 120.8 REMARK 620 N 1 2 3 DBREF 7D8E A 33 361 UNP Q16769 QPCT_HUMAN 33 361 DBREF 7D8E B 33 361 UNP Q16769 QPCT_HUMAN 33 361 DBREF 7D8E C 33 361 UNP Q16769 QPCT_HUMAN 33 361 SEQADV 7D8E GLU A 115 UNP Q16769 TYR 115 ENGINEERED MUTATION SEQADV 7D8E GLU A 117 UNP Q16769 TYR 117 ENGINEERED MUTATION SEQADV 7D8E GLU B 115 UNP Q16769 TYR 115 ENGINEERED MUTATION SEQADV 7D8E GLU B 117 UNP Q16769 TYR 117 ENGINEERED MUTATION SEQADV 7D8E GLU C 115 UNP Q16769 TYR 115 ENGINEERED MUTATION SEQADV 7D8E GLU C 117 UNP Q16769 TYR 117 ENGINEERED MUTATION SEQRES 1 A 329 ALA SER ALA TRP PRO GLU GLU LYS ASN TYR HIS GLN PRO SEQRES 2 A 329 ALA ILE LEU ASN SER SER ALA LEU ARG GLN ILE ALA GLU SEQRES 3 A 329 GLY THR SER ILE SER GLU MET TRP GLN ASN ASP LEU GLN SEQRES 4 A 329 PRO LEU LEU ILE GLU ARG TYR PRO GLY SER PRO GLY SER SEQRES 5 A 329 TYR ALA ALA ARG GLN HIS ILE MET GLN ARG ILE GLN ARG SEQRES 6 A 329 LEU GLN ALA ASP TRP VAL LEU GLU ILE ASP THR PHE LEU SEQRES 7 A 329 SER GLN THR PRO GLU GLY GLU ARG SER PHE SER ASN ILE SEQRES 8 A 329 ILE SER THR LEU ASN PRO THR ALA LYS ARG HIS LEU VAL SEQRES 9 A 329 LEU ALA CYS HIS TYR ASP SER LYS TYR PHE SER HIS TRP SEQRES 10 A 329 ASN ASN ARG VAL PHE VAL GLY ALA THR ASP SER ALA VAL SEQRES 11 A 329 PRO CYS ALA MET MET LEU GLU LEU ALA ARG ALA LEU ASP SEQRES 12 A 329 LYS LYS LEU LEU SER LEU LYS THR VAL SER ASP SER LYS SEQRES 13 A 329 PRO ASP LEU SER LEU GLN LEU ILE PHE PHE ASP GLY GLU SEQRES 14 A 329 GLU ALA PHE LEU HIS TRP SER PRO GLN ASP SER LEU TYR SEQRES 15 A 329 GLY SER ARG HIS LEU ALA ALA LYS MET ALA SER THR PRO SEQRES 16 A 329 HIS PRO PRO GLY ALA ARG GLY THR SER GLN LEU HIS GLY SEQRES 17 A 329 MET ASP LEU LEU VAL LEU LEU ASP LEU ILE GLY ALA PRO SEQRES 18 A 329 ASN PRO THR PHE PRO ASN PHE PHE PRO ASN SER ALA ARG SEQRES 19 A 329 TRP PHE GLU ARG LEU GLN ALA ILE GLU HIS GLU LEU HIS SEQRES 20 A 329 GLU LEU GLY LEU LEU LYS ASP HIS SER LEU GLU GLY ARG SEQRES 21 A 329 TYR PHE GLN ASN TYR SER TYR GLY GLY VAL ILE GLN ASP SEQRES 22 A 329 ASP HIS ILE PRO PHE LEU ARG ARG GLY VAL PRO VAL LEU SEQRES 23 A 329 HIS LEU ILE PRO SER PRO PHE PRO GLU VAL TRP HIS THR SEQRES 24 A 329 MET ASP ASP ASN GLU GLU ASN LEU ASP GLU SER THR ILE SEQRES 25 A 329 ASP ASN LEU ASN LYS ILE LEU GLN VAL PHE VAL LEU GLU SEQRES 26 A 329 TYR LEU HIS LEU SEQRES 1 B 329 ALA SER ALA TRP PRO GLU GLU LYS ASN TYR HIS GLN PRO SEQRES 2 B 329 ALA ILE LEU ASN SER SER ALA LEU ARG GLN ILE ALA GLU SEQRES 3 B 329 GLY THR SER ILE SER GLU MET TRP GLN ASN ASP LEU GLN SEQRES 4 B 329 PRO LEU LEU ILE GLU ARG TYR PRO GLY SER PRO GLY SER SEQRES 5 B 329 TYR ALA ALA ARG GLN HIS ILE MET GLN ARG ILE GLN ARG SEQRES 6 B 329 LEU GLN ALA ASP TRP VAL LEU GLU ILE ASP THR PHE LEU SEQRES 7 B 329 SER GLN THR PRO GLU GLY GLU ARG SER PHE SER ASN ILE SEQRES 8 B 329 ILE SER THR LEU ASN PRO THR ALA LYS ARG HIS LEU VAL SEQRES 9 B 329 LEU ALA CYS HIS TYR ASP SER LYS TYR PHE SER HIS TRP SEQRES 10 B 329 ASN ASN ARG VAL PHE VAL GLY ALA THR ASP SER ALA VAL SEQRES 11 B 329 PRO CYS ALA MET MET LEU GLU LEU ALA ARG ALA LEU ASP SEQRES 12 B 329 LYS LYS LEU LEU SER LEU LYS THR VAL SER ASP SER LYS SEQRES 13 B 329 PRO ASP LEU SER LEU GLN LEU ILE PHE PHE ASP GLY GLU SEQRES 14 B 329 GLU ALA PHE LEU HIS TRP SER PRO GLN ASP SER LEU TYR SEQRES 15 B 329 GLY SER ARG HIS LEU ALA ALA LYS MET ALA SER THR PRO SEQRES 16 B 329 HIS PRO PRO GLY ALA ARG GLY THR SER GLN LEU HIS GLY SEQRES 17 B 329 MET ASP LEU LEU VAL LEU LEU ASP LEU ILE GLY ALA PRO SEQRES 18 B 329 ASN PRO THR PHE PRO ASN PHE PHE PRO ASN SER ALA ARG SEQRES 19 B 329 TRP PHE GLU ARG LEU GLN ALA ILE GLU HIS GLU LEU HIS SEQRES 20 B 329 GLU LEU GLY LEU LEU LYS ASP HIS SER LEU GLU GLY ARG SEQRES 21 B 329 TYR PHE GLN ASN TYR SER TYR GLY GLY VAL ILE GLN ASP SEQRES 22 B 329 ASP HIS ILE PRO PHE LEU ARG ARG GLY VAL PRO VAL LEU SEQRES 23 B 329 HIS LEU ILE PRO SER PRO PHE PRO GLU VAL TRP HIS THR SEQRES 24 B 329 MET ASP ASP ASN GLU GLU ASN LEU ASP GLU SER THR ILE SEQRES 25 B 329 ASP ASN LEU ASN LYS ILE LEU GLN VAL PHE VAL LEU GLU SEQRES 26 B 329 TYR LEU HIS LEU SEQRES 1 C 329 ALA SER ALA TRP PRO GLU GLU LYS ASN TYR HIS GLN PRO SEQRES 2 C 329 ALA ILE LEU ASN SER SER ALA LEU ARG GLN ILE ALA GLU SEQRES 3 C 329 GLY THR SER ILE SER GLU MET TRP GLN ASN ASP LEU GLN SEQRES 4 C 329 PRO LEU LEU ILE GLU ARG TYR PRO GLY SER PRO GLY SER SEQRES 5 C 329 TYR ALA ALA ARG GLN HIS ILE MET GLN ARG ILE GLN ARG SEQRES 6 C 329 LEU GLN ALA ASP TRP VAL LEU GLU ILE ASP THR PHE LEU SEQRES 7 C 329 SER GLN THR PRO GLU GLY GLU ARG SER PHE SER ASN ILE SEQRES 8 C 329 ILE SER THR LEU ASN PRO THR ALA LYS ARG HIS LEU VAL SEQRES 9 C 329 LEU ALA CYS HIS TYR ASP SER LYS TYR PHE SER HIS TRP SEQRES 10 C 329 ASN ASN ARG VAL PHE VAL GLY ALA THR ASP SER ALA VAL SEQRES 11 C 329 PRO CYS ALA MET MET LEU GLU LEU ALA ARG ALA LEU ASP SEQRES 12 C 329 LYS LYS LEU LEU SER LEU LYS THR VAL SER ASP SER LYS SEQRES 13 C 329 PRO ASP LEU SER LEU GLN LEU ILE PHE PHE ASP GLY GLU SEQRES 14 C 329 GLU ALA PHE LEU HIS TRP SER PRO GLN ASP SER LEU TYR SEQRES 15 C 329 GLY SER ARG HIS LEU ALA ALA LYS MET ALA SER THR PRO SEQRES 16 C 329 HIS PRO PRO GLY ALA ARG GLY THR SER GLN LEU HIS GLY SEQRES 17 C 329 MET ASP LEU LEU VAL LEU LEU ASP LEU ILE GLY ALA PRO SEQRES 18 C 329 ASN PRO THR PHE PRO ASN PHE PHE PRO ASN SER ALA ARG SEQRES 19 C 329 TRP PHE GLU ARG LEU GLN ALA ILE GLU HIS GLU LEU HIS SEQRES 20 C 329 GLU LEU GLY LEU LEU LYS ASP HIS SER LEU GLU GLY ARG SEQRES 21 C 329 TYR PHE GLN ASN TYR SER TYR GLY GLY VAL ILE GLN ASP SEQRES 22 C 329 ASP HIS ILE PRO PHE LEU ARG ARG GLY VAL PRO VAL LEU SEQRES 23 C 329 HIS LEU ILE PRO SER PRO PHE PRO GLU VAL TRP HIS THR SEQRES 24 C 329 MET ASP ASP ASN GLU GLU ASN LEU ASP GLU SER THR ILE SEQRES 25 C 329 ASP ASN LEU ASN LYS ILE LEU GLN VAL PHE VAL LEU GLU SEQRES 26 C 329 TYR LEU HIS LEU HET ZN A1000 1 HET EDO A1001 4 HET EDO A1002 4 HET EDO A1003 4 HET EDO A1004 4 HET SO4 A1005 5 HET SO4 A1006 5 HET SO4 A1007 5 HET GYO A1008 23 HET ZN B1000 1 HET EDO B1001 4 HET EDO B1002 4 HET EDO B1003 4 HET SO4 B1004 5 HET SO4 B1005 5 HET GYO B1006 23 HET ZN C1000 1 HET EDO C1001 4 HET EDO C1002 4 HET SO4 C1003 5 HET SO4 C1004 5 HET GYO C1005 23 HETNAM ZN ZINC ION HETNAM EDO 1,2-ETHANEDIOL HETNAM SO4 SULFATE ION HETNAM GYO ~{N}-[(1~{S},2~{S})-2-(2-METHOXYPHENYL)CYCLOPROPYL]- HETNAM 2 GYO 3~{H}-BENZIMIDAZOLE-5-CARBOXAMIDE HETSYN EDO ETHYLENE GLYCOL FORMUL 4 ZN 3(ZN 2+) FORMUL 5 EDO 9(C2 H6 O2) FORMUL 9 SO4 7(O4 S 2-) FORMUL 12 GYO 3(C18 H17 N3 O2) FORMUL 26 HOH *342(H2 O) HELIX 1 AA1 ALA A 35 PRO A 37 5 3 HELIX 2 AA2 GLU A 38 HIS A 43 1 6 HELIX 3 AA3 ASN A 49 THR A 60 1 12 HELIX 4 AA4 SER A 61 ASP A 69 1 9 HELIX 5 AA5 LEU A 70 LEU A 74 5 5 HELIX 6 AA6 SER A 81 ARG A 97 1 17 HELIX 7 AA7 SER A 160 LEU A 174 1 15 HELIX 8 AA8 LEU A 174 SER A 180 1 7 HELIX 9 AA9 LEU A 213 THR A 226 1 14 HELIX 10 AB1 SER A 236 GLY A 240 1 5 HELIX 11 AB2 PHE A 261 ASN A 263 5 3 HELIX 12 AB3 SER A 264 LEU A 281 1 18 HELIX 13 AB4 SER A 288 ARG A 292 5 5 HELIX 14 AB5 HIS A 307 ARG A 312 1 6 HELIX 15 AB6 ASN A 335 LEU A 339 5 5 HELIX 16 AB7 ASP A 340 HIS A 360 1 21 HELIX 17 AB8 ALA B 35 HIS B 43 5 9 HELIX 18 AB9 ASN B 49 THR B 60 1 12 HELIX 19 AC1 SER B 61 ASP B 69 1 9 HELIX 20 AC2 LEU B 70 LEU B 74 5 5 HELIX 21 AC3 SER B 81 ARG B 97 1 17 HELIX 22 AC4 SER B 160 LEU B 174 1 15 HELIX 23 AC5 LEU B 174 SER B 180 1 7 HELIX 24 AC6 LEU B 213 THR B 226 1 14 HELIX 25 AC7 SER B 236 GLY B 240 1 5 HELIX 26 AC8 PHE B 261 ASN B 263 5 3 HELIX 27 AC9 SER B 264 LEU B 281 1 18 HELIX 28 AD1 SER B 288 ARG B 292 5 5 HELIX 29 AD2 HIS B 307 ARG B 312 1 6 HELIX 30 AD3 ASN B 335 LEU B 339 5 5 HELIX 31 AD4 ASP B 340 LEU B 359 1 20 HELIX 32 AD5 ALA C 35 HIS C 43 5 9 HELIX 33 AD6 ASN C 49 THR C 60 1 12 HELIX 34 AD7 SER C 61 ASP C 69 1 9 HELIX 35 AD8 LEU C 70 LEU C 74 5 5 HELIX 36 AD9 SER C 81 ARG C 97 1 17 HELIX 37 AE1 SER C 160 LEU C 174 1 15 HELIX 38 AE2 LEU C 174 SER C 180 1 7 HELIX 39 AE3 LEU C 213 SER C 225 1 13 HELIX 40 AE4 PHE C 261 ASN C 263 5 3 HELIX 41 AE5 SER C 264 LEU C 281 1 18 HELIX 42 AE6 SER C 288 ARG C 292 5 5 HELIX 43 AE7 HIS C 307 ARG C 312 1 6 HELIX 44 AE8 ASN C 335 LEU C 339 5 5 HELIX 45 AE9 ASP C 340 HIS C 360 1 21 SHEET 1 AA1 6 VAL A 103 SER A 111 0 SHEET 2 AA1 6 ARG A 118 THR A 126 -1 O ILE A 124 N GLU A 105 SHEET 3 AA1 6 LEU A 191 PHE A 198 -1 O LEU A 195 N SER A 125 SHEET 4 AA1 6 ARG A 133 HIS A 140 1 N CYS A 139 O PHE A 198 SHEET 5 AA1 6 MET A 241 LEU A 247 1 O VAL A 245 N VAL A 136 SHEET 6 AA1 6 VAL A 317 LEU A 320 1 O LEU A 318 N LEU A 244 SHEET 1 AA2 6 VAL B 103 SER B 111 0 SHEET 2 AA2 6 ARG B 118 THR B 126 -1 O THR B 126 N VAL B 103 SHEET 3 AA2 6 LEU B 191 PHE B 198 -1 O LEU B 195 N SER B 125 SHEET 4 AA2 6 ARG B 133 HIS B 140 1 N CYS B 139 O PHE B 198 SHEET 5 AA2 6 MET B 241 LEU B 247 1 O VAL B 245 N VAL B 136 SHEET 6 AA2 6 VAL B 317 LEU B 320 1 O LEU B 318 N LEU B 244 SHEET 1 AA3 6 VAL C 103 SER C 111 0 SHEET 2 AA3 6 ARG C 118 THR C 126 -1 O ILE C 124 N GLU C 105 SHEET 3 AA3 6 LEU C 191 PHE C 198 -1 O LEU C 195 N SER C 125 SHEET 4 AA3 6 ARG C 133 HIS C 140 1 N CYS C 139 O PHE C 198 SHEET 5 AA3 6 MET C 241 LEU C 247 1 O VAL C 245 N VAL C 136 SHEET 6 AA3 6 VAL C 317 LEU C 320 1 O LEU C 318 N LEU C 244 LINK OD2 ASP A 159 ZN ZN A1000 1555 1555 1.93 LINK OE2 GLU A 202 ZN ZN A1000 1555 1555 1.87 LINK NE2 HIS A 330 ZN ZN A1000 1555 1555 1.99 LINK ZN ZN A1000 N03 GYO A1008 1555 1555 2.01 LINK OD2 ASP B 159 ZN ZN B1000 1555 1555 1.96 LINK OE2 GLU B 202 ZN ZN B1000 1555 1555 1.93 LINK NE2 HIS B 330 ZN ZN B1000 1555 1555 2.00 LINK ZN ZN B1000 N03 GYO B1006 1555 1555 1.98 LINK OD2 ASP C 159 ZN ZN C1000 1555 1555 1.95 LINK OE2 GLU C 202 ZN ZN C1000 1555 1555 1.89 LINK NE2 HIS C 330 ZN ZN C1000 1555 1555 1.96 LINK ZN ZN C1000 N03 GYO C1005 1555 1555 2.01 CISPEP 1 ASP A 159 SER A 160 0 -3.91 CISPEP 2 HIS A 228 PRO A 229 0 -7.75 CISPEP 3 SER A 323 PRO A 324 0 3.98 CISPEP 4 ASP B 159 SER B 160 0 -7.64 CISPEP 5 HIS B 228 PRO B 229 0 -6.79 CISPEP 6 SER B 323 PRO B 324 0 8.33 CISPEP 7 ASP C 159 SER C 160 0 -4.86 CISPEP 8 HIS C 228 PRO C 229 0 -7.70 CISPEP 9 SER C 323 PRO C 324 0 7.46 CRYST1 86.181 149.303 94.539 90.00 97.64 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011603 0.000000 0.001556 0.00000 SCALE2 0.000000 0.006698 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010672 0.00000