HEADER TRANSFERASE 18-OCT-20 7DB0 TITLE CRYSTAL STRUCTURE OF DROSOPHILA MELANOGASTER NOPPERA-BO, GLUTATHIONE TITLE 2 S-TRANSFERASE EPSILON 14 (DMGSTE14), IN DIMEDONE-BOUND FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTATHIONE S-TRANSFERASE E14; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PROTEIN NOPPERA-BO; COMPND 5 EC: 2.5.1.18; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 GENE: GSTE14, GSTD14-14, NOBO, CG4688; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PCOLD_III KEYWDS DROSOPHILA MELANOGASTER, GLUTATHIONE S-TRANSFERASE, GST, GSTE14, KEYWDS 2 INHIBITOR, ECDYSTEROID, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.KOIWAI,K.INABA,F.YUMOTO,T.SENDA,R.NIWA REVDAT 3 29-NOV-23 7DB0 1 JRNL REVDAT 2 31-MAR-21 7DB0 1 JRNL REVDAT 1 10-FEB-21 7DB0 0 JRNL AUTH K.KOIWAI,K.MOROHASHI,K.INABA,K.EBIHARA,H.KOJIMA,T.OKABE, JRNL AUTH 2 R.YOSHINO,T.HIROKAWA,T.NAMPO,Y.FUJIKAWA,H.INOUE,F.YUMOTO, JRNL AUTH 3 T.SENDA,R.NIWA JRNL TITL NON-STEROIDAL INHIBITORS OF DROSOPHILA MELANOGASTER JRNL TITL 2 STEROIDOGENIC GLUTATHIONE S -TRANSFERASE NOPPERA-BO JRNL REF J PESTIC SCI V. 46 75 2021 JRNL REFN ISSN 1348-589X JRNL DOI 10.1584/JPESTICS.D20-072 REMARK 2 REMARK 2 RESOLUTION. 1.66 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.66 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.39 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 56427 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.150 REMARK 3 FREE R VALUE TEST SET COUNT : 2904 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.3900 - 4.5800 0.99 2741 138 0.1750 0.1779 REMARK 3 2 4.5800 - 3.6300 1.00 2609 147 0.1392 0.1768 REMARK 3 3 3.6300 - 3.1700 1.00 2585 140 0.1515 0.1909 REMARK 3 4 3.1700 - 2.8800 1.00 2580 132 0.1607 0.1709 REMARK 3 5 2.8800 - 2.6800 1.00 2587 116 0.1668 0.2199 REMARK 3 6 2.6800 - 2.5200 1.00 2542 167 0.1650 0.1864 REMARK 3 7 2.5200 - 2.3900 1.00 2542 134 0.1693 0.2038 REMARK 3 8 2.3900 - 2.2900 1.00 2546 112 0.1594 0.2125 REMARK 3 9 2.2900 - 2.2000 1.00 2563 131 0.1661 0.1980 REMARK 3 10 2.2000 - 2.1300 1.00 2546 141 0.1658 0.1864 REMARK 3 11 2.1300 - 2.0600 1.00 2524 145 0.1727 0.1895 REMARK 3 12 2.0600 - 2.0000 1.00 2523 133 0.1696 0.1940 REMARK 3 13 2.0000 - 1.9500 1.00 2531 149 0.1876 0.2095 REMARK 3 14 1.9500 - 1.9000 1.00 2496 151 0.1907 0.2556 REMARK 3 15 1.9000 - 1.8600 1.00 2510 155 0.2062 0.2179 REMARK 3 16 1.8600 - 1.8200 1.00 2528 133 0.2106 0.2551 REMARK 3 17 1.8200 - 1.7800 1.00 2502 136 0.2209 0.2637 REMARK 3 18 1.7800 - 1.7500 1.00 2536 122 0.2217 0.2433 REMARK 3 19 1.7500 - 1.7200 1.00 2532 139 0.2247 0.2713 REMARK 3 20 1.7200 - 1.6900 1.00 2467 140 0.2279 0.2534 REMARK 3 21 1.6900 - 1.6600 1.00 2533 143 0.2409 0.2378 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.720 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.98 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.22 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3855 REMARK 3 ANGLE : 0.717 5240 REMARK 3 CHIRALITY : 0.215 578 REMARK 3 PLANARITY : 0.004 685 REMARK 3 DIHEDRAL : 23.354 1428 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7DB0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-OCT-20. REMARK 100 THE DEPOSITION ID IS D_1300018179. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-NOV-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS JUN 17, 2015 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.15 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56430 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.660 REMARK 200 RESOLUTION RANGE LOW (A) : 35.390 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.11400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.66 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.73200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP 11.7.02 REMARK 200 STARTING MODEL: 6KEM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 34% (V/V) PPG400 IN 80MM BIS-TRIS, PH REMARK 280 6.4, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.62650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.97600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.37350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.97600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.62650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.37350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -6 REMARK 465 ASN A -5 REMARK 465 HIS A -4 REMARK 465 LYS A -3 REMARK 465 VAL A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 THR A 228 REMARK 465 GLU A 229 REMARK 465 LYS A 230 REMARK 465 VAL A 231 REMARK 465 GLU A 232 REMARK 465 MET B -6 REMARK 465 ASN B -5 REMARK 465 HIS B -4 REMARK 465 LYS B -3 REMARK 465 VAL B -2 REMARK 465 HIS B -1 REMARK 465 MET B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 GLN B 3 REMARK 465 SER B 223 REMARK 465 SER B 224 REMARK 465 ALA B 225 REMARK 465 VAL B 226 REMARK 465 VAL B 227 REMARK 465 THR B 228 REMARK 465 GLU B 229 REMARK 465 LYS B 230 REMARK 465 VAL B 231 REMARK 465 GLU B 232 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 3 CG CD OE1 NE2 REMARK 470 LYS A 46 CD CE NZ REMARK 470 ASP A 64 CG OD1 OD2 REMARK 470 SER A 223 OG REMARK 470 LYS B 40 CG CD CE NZ REMARK 470 LYS B 46 CG CD CE NZ REMARK 470 ARG B 122 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 123 CG CD OE1 NE2 REMARK 470 ASN B 150 CG OD1 ND2 REMARK 470 ARG B 187 CG CD NE CZ NH1 NH2 REMARK 470 SER B 222 C O CB OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER B 86 O HOH B 401 2.03 REMARK 500 O HOH B 577 O HOH B 579 2.04 REMARK 500 O HOH B 601 O HOH B 619 2.05 REMARK 500 O HOH B 525 O HOH B 610 2.06 REMARK 500 O HOH B 538 O HOH B 566 2.06 REMARK 500 O HOH A 671 O HOH B 606 2.06 REMARK 500 O HOH A 535 O HOH A 566 2.09 REMARK 500 O HOH B 556 O HOH B 636 2.09 REMARK 500 O HOH A 653 O HOH A 672 2.09 REMARK 500 O HOH A 493 O HOH A 643 2.11 REMARK 500 O HOH A 490 O HOH A 650 2.11 REMARK 500 O HOH A 577 O HOH A 654 2.13 REMARK 500 O HOH A 490 O HOH A 591 2.14 REMARK 500 O HOH B 490 O HOH B 545 2.14 REMARK 500 O HOH A 464 O HOH A 672 2.15 REMARK 500 NH1 ARG B 135 O HOH B 402 2.17 REMARK 500 O HOH A 612 O HOH B 524 2.17 REMARK 500 O HOH A 412 O HOH A 562 2.18 REMARK 500 O HOH A 625 O HOH B 439 2.18 REMARK 500 O HOH A 433 O HOH A 543 2.18 REMARK 500 O HOH B 578 O HOH B 616 2.18 REMARK 500 O HOH B 552 O HOH B 619 2.18 REMARK 500 O HOH B 578 O HOH B 625 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 566 O HOH A 582 4555 2.04 REMARK 500 OD2 ASP A 30 OG SER A 214 4455 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 83 CD GLU A 83 OE2 -0.157 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 108 -64.05 -120.70 REMARK 500 HIS B 55 51.49 39.66 REMARK 500 PHE B 108 -65.58 -120.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 678 DISTANCE = 6.08 ANGSTROMS REMARK 525 HOH A 679 DISTANCE = 6.53 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DC1 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DC1 B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS B 305 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6KEM RELATED DB: PDB DBREF 7DB0 A 1 232 UNP Q7JYX0 GSTEE_DROME 1 232 DBREF 7DB0 B 1 232 UNP Q7JYX0 GSTEE_DROME 1 232 SEQADV 7DB0 MET A -6 UNP Q7JYX0 INITIATING METHIONINE SEQADV 7DB0 ASN A -5 UNP Q7JYX0 EXPRESSION TAG SEQADV 7DB0 HIS A -4 UNP Q7JYX0 EXPRESSION TAG SEQADV 7DB0 LYS A -3 UNP Q7JYX0 EXPRESSION TAG SEQADV 7DB0 VAL A -2 UNP Q7JYX0 EXPRESSION TAG SEQADV 7DB0 HIS A -1 UNP Q7JYX0 EXPRESSION TAG SEQADV 7DB0 MET A 0 UNP Q7JYX0 EXPRESSION TAG SEQADV 7DB0 ILE A 120 UNP Q7JYX0 THR 120 VARIANT SEQADV 7DB0 MET B -6 UNP Q7JYX0 INITIATING METHIONINE SEQADV 7DB0 ASN B -5 UNP Q7JYX0 EXPRESSION TAG SEQADV 7DB0 HIS B -4 UNP Q7JYX0 EXPRESSION TAG SEQADV 7DB0 LYS B -3 UNP Q7JYX0 EXPRESSION TAG SEQADV 7DB0 VAL B -2 UNP Q7JYX0 EXPRESSION TAG SEQADV 7DB0 HIS B -1 UNP Q7JYX0 EXPRESSION TAG SEQADV 7DB0 MET B 0 UNP Q7JYX0 EXPRESSION TAG SEQADV 7DB0 ILE B 120 UNP Q7JYX0 THR 120 VARIANT SEQRES 1 A 239 MET ASN HIS LYS VAL HIS MET MET SER GLN PRO LYS PRO SEQRES 2 A 239 ILE LEU TYR TYR ASP GLU ARG SER PRO PRO VAL ARG SER SEQRES 3 A 239 CYS LEU MET LEU ILE LYS LEU LEU ASP ILE ASP VAL GLU SEQRES 4 A 239 LEU ARG PHE VAL ASN LEU PHE LYS GLY GLU GLN PHE GLN SEQRES 5 A 239 LYS ASP PHE LEU ALA LEU ASN PRO GLN HIS SER VAL PRO SEQRES 6 A 239 THR LEU VAL HIS GLY ASP LEU VAL LEU THR ASP SER HIS SEQRES 7 A 239 ALA ILE LEU ILE HIS LEU ALA GLU LYS PHE ASP GLU GLY SEQRES 8 A 239 GLY SER LEU TRP PRO GLN GLU HIS ALA GLU ARG MET LYS SEQRES 9 A 239 VAL LEU ASN LEU LEU LEU PHE GLU CYS SER PHE LEU PHE SEQRES 10 A 239 ARG ARG ASP SER ASP PHE MET SER ALA ILE VAL ARG GLN SEQRES 11 A 239 GLY PHE ALA ASN VAL ASP VAL ALA HIS HIS GLU ARG LYS SEQRES 12 A 239 LEU THR GLU ALA TYR ILE ILE MET GLU ARG TYR LEU GLU SEQRES 13 A 239 ASN SER ASP PHE MET ALA GLY PRO GLN LEU THR LEU ALA SEQRES 14 A 239 ASP LEU SER ILE VAL THR THR LEU SER THR VAL ASN LEU SEQRES 15 A 239 MET PHE PRO LEU SER GLN PHE PRO ARG LEU ARG ARG TRP SEQRES 16 A 239 PHE THR ALA MET GLN GLN LEU ASP ALA TYR GLU ALA ASN SEQRES 17 A 239 CYS SER GLY LEU GLU LYS LEU ARG GLN THR MET GLU SER SEQRES 18 A 239 VAL GLY SER PHE GLN PHE PRO SER SER SER ALA VAL VAL SEQRES 19 A 239 THR GLU LYS VAL GLU SEQRES 1 B 239 MET ASN HIS LYS VAL HIS MET MET SER GLN PRO LYS PRO SEQRES 2 B 239 ILE LEU TYR TYR ASP GLU ARG SER PRO PRO VAL ARG SER SEQRES 3 B 239 CYS LEU MET LEU ILE LYS LEU LEU ASP ILE ASP VAL GLU SEQRES 4 B 239 LEU ARG PHE VAL ASN LEU PHE LYS GLY GLU GLN PHE GLN SEQRES 5 B 239 LYS ASP PHE LEU ALA LEU ASN PRO GLN HIS SER VAL PRO SEQRES 6 B 239 THR LEU VAL HIS GLY ASP LEU VAL LEU THR ASP SER HIS SEQRES 7 B 239 ALA ILE LEU ILE HIS LEU ALA GLU LYS PHE ASP GLU GLY SEQRES 8 B 239 GLY SER LEU TRP PRO GLN GLU HIS ALA GLU ARG MET LYS SEQRES 9 B 239 VAL LEU ASN LEU LEU LEU PHE GLU CYS SER PHE LEU PHE SEQRES 10 B 239 ARG ARG ASP SER ASP PHE MET SER ALA ILE VAL ARG GLN SEQRES 11 B 239 GLY PHE ALA ASN VAL ASP VAL ALA HIS HIS GLU ARG LYS SEQRES 12 B 239 LEU THR GLU ALA TYR ILE ILE MET GLU ARG TYR LEU GLU SEQRES 13 B 239 ASN SER ASP PHE MET ALA GLY PRO GLN LEU THR LEU ALA SEQRES 14 B 239 ASP LEU SER ILE VAL THR THR LEU SER THR VAL ASN LEU SEQRES 15 B 239 MET PHE PRO LEU SER GLN PHE PRO ARG LEU ARG ARG TRP SEQRES 16 B 239 PHE THR ALA MET GLN GLN LEU ASP ALA TYR GLU ALA ASN SEQRES 17 B 239 CYS SER GLY LEU GLU LYS LEU ARG GLN THR MET GLU SER SEQRES 18 B 239 VAL GLY SER PHE GLN PHE PRO SER SER SER ALA VAL VAL SEQRES 19 B 239 THR GLU LYS VAL GLU HET DC1 A 301 10 HET DMS A 302 10 HET DMS A 303 10 HET DMS A 304 10 HET DMS A 305 10 HET DMS A 306 10 HET DMS A 307 10 HET DMS A 308 10 HET DMS A 309 10 HET DC1 B 301 10 HET DMS B 302 10 HET DMS B 303 10 HET DMS B 304 10 HET DMS B 305 10 HETNAM DC1 5,5-DIMETHYLCYCLOHEXANE-1,3-DIONE HETNAM DMS DIMETHYL SULFOXIDE HETSYN DC1 2,2 DIMETHYL,1,6 CYCLOHEXA DIONE; DIMEDONE FORMUL 3 DC1 2(C8 H12 O2) FORMUL 4 DMS 12(C2 H6 O S) FORMUL 17 HOH *523(H2 O) HELIX 1 AA1 SER A 14 ASP A 28 1 15 HELIX 2 AA2 GLY A 41 PHE A 44 5 4 HELIX 3 AA3 GLN A 45 ASN A 52 1 8 HELIX 4 AA4 ASP A 69 ASP A 82 1 14 HELIX 5 AA5 GLU A 91 PHE A 108 1 18 HELIX 6 AA6 PHE A 108 GLY A 124 1 17 HELIX 7 AA7 PHE A 125 VAL A 128 5 4 HELIX 8 AA8 ASP A 129 GLU A 149 1 21 HELIX 9 AA9 THR A 160 ASN A 174 1 15 HELIX 10 AB1 PHE A 182 LEU A 195 1 14 HELIX 11 AB2 TYR A 198 SER A 217 1 20 HELIX 12 AB3 SER B 14 ASP B 28 1 15 HELIX 13 AB4 ASN B 37 PHE B 44 5 8 HELIX 14 AB5 GLN B 45 ASN B 52 1 8 HELIX 15 AB6 ASP B 69 ASP B 82 1 14 HELIX 16 AB7 GLU B 91 PHE B 108 1 18 HELIX 17 AB8 PHE B 108 GLY B 124 1 17 HELIX 18 AB9 PHE B 125 VAL B 128 5 4 HELIX 19 AC1 ASP B 129 LEU B 148 1 20 HELIX 20 AC2 THR B 160 ASN B 174 1 15 HELIX 21 AC3 PHE B 182 GLN B 193 1 12 HELIX 22 AC4 GLN B 194 ALA B 197 5 4 HELIX 23 AC5 TYR B 198 SER B 217 1 20 SHEET 1 AA1 4 GLU A 32 PHE A 35 0 SHEET 2 AA1 4 ILE A 7 TYR A 10 1 N LEU A 8 O GLU A 32 SHEET 3 AA1 4 THR A 59 HIS A 62 -1 O THR A 59 N TYR A 9 SHEET 4 AA1 4 LEU A 65 LEU A 67 -1 O LEU A 67 N LEU A 60 SHEET 1 AA2 4 GLU B 32 PHE B 35 0 SHEET 2 AA2 4 ILE B 7 TYR B 10 1 N LEU B 8 O ARG B 34 SHEET 3 AA2 4 THR B 59 HIS B 62 -1 O THR B 59 N TYR B 9 SHEET 4 AA2 4 LEU B 65 LEU B 67 -1 O LEU B 67 N LEU B 60 CISPEP 1 VAL A 57 PRO A 58 0 2.81 CISPEP 2 VAL B 57 PRO B 58 0 5.68 CISPEP 3 VAL B 57 PRO B 58 0 6.08 SITE 1 AC1 6 PRO A 15 PHE A 110 ASP A 113 SER A 114 SITE 2 AC1 6 THR A 172 HOH A 409 SITE 1 AC2 3 TYR A 147 ASN A 150 HOH A 441 SITE 1 AC3 5 ASP A 152 PHE A 153 ARG A 187 ALA A 191 SITE 2 AC3 5 HOH A 447 SITE 1 AC4 2 LEU A 27 PHE A 35 SITE 1 AC5 9 ASP A 28 ILE A 29 ASP A 30 PHE A 81 SITE 2 AC5 9 GLN A 210 SER A 214 HOH A 404 HOH A 411 SITE 3 AC5 9 HOH A 549 SITE 1 AC6 4 TYR A 10 GLU A 12 LEU A 33 HOH A 633 SITE 1 AC7 5 HIS A 62 LEU A 65 HIS A 76 LYS A 80 SITE 2 AC7 5 HOH A 416 SITE 1 AC8 4 SER A 107 ARG A 111 ARG A 112 HOH A 557 SITE 1 AC9 5 CYS A 106 PHE A 110 HOH A 528 HOH A 620 SITE 2 AC9 5 HOH B 453 SITE 1 AD1 6 PRO B 15 PHE B 110 ASP B 113 SER B 114 SITE 2 AD1 6 THR B 172 HOH B 445 SITE 1 AD2 3 GLN B 181 HOH B 478 HOH B 555 SITE 1 AD3 5 HOH A 628 GLU B 12 LEU B 33 HOH B 406 SITE 2 AD3 5 HOH B 626 SITE 1 AD4 4 HIS A 92 HIS B 62 LEU B 65 HIS B 76 SITE 1 AD5 7 SER B 56 VAL B 57 PRO B 58 THR B 68 SITE 2 AD5 7 ASP B 69 SER B 70 HOH B 420 CRYST1 57.253 74.747 109.952 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017466 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013378 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009095 0.00000