HEADER IMMUNE SYSTEM 14-NOV-20 7DHG TITLE CRYSTAL STRUCTURE OF SARS-COV-2 ORF9B COMPLEX WITH HUMAN TOM70 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM70; COMPND 3 CHAIN: C; COMPND 4 SYNONYM: MITOCHONDRIAL PRECURSOR PROTEINS IMPORT RECEPTOR,TRANSLOCASE COMPND 5 OF OUTER MEMBRANE 70 KDA SUBUNIT,TRANSLOCASE OF OUTER MITOCHONDRIAL COMPND 6 MEMBRANE PROTEIN 70; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: ORF9B PROTEIN; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: ORF9B,ACCESSORY PROTEIN 9B,ORF-9B,PROTEIN 9B; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TOMM70, KIAA0719, TOM70, TOMM70A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 10 2; SOURCE 11 ORGANISM_COMMON: 2019-NCOV; SOURCE 12 ORGANISM_TAXID: 2697049; SOURCE 13 GENE: 9B; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS HSP90, ORF9B, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR X.GAO,K.ZHU,B.QIN,V.OLIERIC,M.WANG,S.CUI REVDAT 4 29-NOV-23 7DHG 1 REMARK REVDAT 3 02-JUN-21 7DHG 1 JRNL REVDAT 2 19-MAY-21 7DHG 1 TITLE AUTHOR JRNL REVDAT 1 12-MAY-21 7DHG 0 JRNL AUTH X.GAO,K.ZHU,B.QIN,V.OLIERIC,M.WANG,S.CUI JRNL TITL CRYSTAL STRUCTURE OF SARS-COV-2 ORF9B IN COMPLEX WITH HUMAN JRNL TITL 2 TOM70 SUGGESTS UNUSUAL VIRUS-HOST INTERACTIONS. JRNL REF NAT COMMUN V. 12 2843 2021 JRNL REFN ESSN 2041-1723 JRNL PMID 33990585 JRNL DOI 10.1038/S41467-021-23118-8 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.17.1_3660: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.01 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 51681 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 2552 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 50.0100 - 5.7700 0.98 2749 141 0.1724 0.2317 REMARK 3 2 5.7600 - 4.5800 1.00 2788 135 0.1985 0.2852 REMARK 3 3 4.5800 - 4.0000 1.00 2772 162 0.1765 0.2005 REMARK 3 4 4.0000 - 3.6300 1.00 2738 218 0.2048 0.2271 REMARK 3 5 3.6300 - 3.3700 1.00 2785 132 0.2365 0.2976 REMARK 3 6 3.3700 - 3.1700 1.00 2823 132 0.2616 0.2854 REMARK 3 7 3.1700 - 3.0200 1.00 2778 128 0.2594 0.3573 REMARK 3 8 3.0200 - 2.8800 1.00 2802 156 0.2551 0.2979 REMARK 3 9 2.8800 - 2.7700 1.00 2823 130 0.2539 0.2866 REMARK 3 10 2.7700 - 2.6800 1.00 2790 137 0.2727 0.3493 REMARK 3 11 2.6800 - 2.5900 1.00 2807 129 0.2661 0.2847 REMARK 3 12 2.5900 - 2.5200 1.00 2767 187 0.2717 0.2938 REMARK 3 13 2.5200 - 2.4500 1.00 2785 136 0.2857 0.3103 REMARK 3 14 2.4500 - 2.3900 1.00 2796 134 0.2901 0.3635 REMARK 3 15 2.3900 - 2.3400 0.99 2725 164 0.3090 0.3085 REMARK 3 16 2.3400 - 2.2900 0.95 2701 99 0.3245 0.3428 REMARK 3 17 2.2900 - 2.2400 0.88 2495 118 0.3284 0.3761 REMARK 3 18 2.2400 - 2.2000 0.79 2205 114 0.3455 0.3708 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.750 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 4079 REMARK 3 ANGLE : 0.444 5482 REMARK 3 CHIRALITY : 0.033 601 REMARK 3 PLANARITY : 0.002 714 REMARK 3 DIHEDRAL : 20.132 1569 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7DHG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-NOV-20. REMARK 100 THE DEPOSITION ID IS D_1300019392. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-NOV-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9785 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51880 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 66.890 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 5.780 REMARK 200 R MERGE (I) : 0.09900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.3300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.99 REMARK 200 R MERGE FOR SHELL (I) : 1.35000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 0.710 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 7KDT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 28.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS PH5.5,21%PEG3350, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.32750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.01350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.71900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 62.01350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.32750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.71900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 ALA C 3 REMARK 465 SER C 4 REMARK 465 LYS C 5 REMARK 465 PRO C 6 REMARK 465 VAL C 7 REMARK 465 GLU C 8 REMARK 465 ALA C 9 REMARK 465 ALA C 10 REMARK 465 VAL C 11 REMARK 465 VAL C 12 REMARK 465 ALA C 13 REMARK 465 ALA C 14 REMARK 465 ALA C 15 REMARK 465 VAL C 16 REMARK 465 PRO C 17 REMARK 465 SER C 18 REMARK 465 SER C 19 REMARK 465 GLY C 20 REMARK 465 SER C 21 REMARK 465 GLY C 22 REMARK 465 VAL C 23 REMARK 465 GLY C 24 REMARK 465 GLY C 25 REMARK 465 GLY C 26 REMARK 465 GLY C 27 REMARK 465 THR C 28 REMARK 465 ALA C 29 REMARK 465 GLY C 30 REMARK 465 PRO C 31 REMARK 465 GLY C 32 REMARK 465 THR C 33 REMARK 465 GLY C 34 REMARK 465 GLY C 35 REMARK 465 LEU C 36 REMARK 465 PRO C 37 REMARK 465 ARG C 38 REMARK 465 TRP C 39 REMARK 465 GLN C 40 REMARK 465 LEU C 41 REMARK 465 ALA C 42 REMARK 465 LEU C 43 REMARK 465 ALA C 44 REMARK 465 VAL C 45 REMARK 465 GLY C 46 REMARK 465 ALA C 47 REMARK 465 PRO C 48 REMARK 465 LEU C 49 REMARK 465 LEU C 50 REMARK 465 LEU C 51 REMARK 465 GLY C 52 REMARK 465 ALA C 53 REMARK 465 GLY C 54 REMARK 465 ALA C 55 REMARK 465 ILE C 56 REMARK 465 TYR C 57 REMARK 465 LEU C 58 REMARK 465 TRP C 59 REMARK 465 SER C 60 REMARK 465 ARG C 61 REMARK 465 GLN C 62 REMARK 465 GLN C 63 REMARK 465 ARG C 64 REMARK 465 ARG C 65 REMARK 465 ARG C 66 REMARK 465 GLU C 67 REMARK 465 ALA C 68 REMARK 465 ARG C 69 REMARK 465 GLY C 70 REMARK 465 ARG C 71 REMARK 465 GLY C 72 REMARK 465 ASP C 73 REMARK 465 ALA C 74 REMARK 465 SER C 75 REMARK 465 GLY C 76 REMARK 465 LEU C 77 REMARK 465 LYS C 78 REMARK 465 ARG C 79 REMARK 465 ASN C 80 REMARK 465 SER C 81 REMARK 465 GLU C 82 REMARK 465 ARG C 83 REMARK 465 LYS C 84 REMARK 465 THR C 85 REMARK 465 PRO C 86 REMARK 465 GLU C 87 REMARK 465 GLY C 88 REMARK 465 ARG C 89 REMARK 465 ALA C 90 REMARK 465 SER C 91 REMARK 465 PRO C 92 REMARK 465 ALA C 93 REMARK 465 PRO C 94 REMARK 465 GLY C 95 REMARK 465 SER C 96 REMARK 465 GLY C 97 REMARK 465 HIS C 98 REMARK 465 PRO C 99 REMARK 465 GLU C 100 REMARK 465 GLY C 101 REMARK 465 PRO C 102 REMARK 465 GLY C 103 REMARK 465 ALA C 104 REMARK 465 HIS C 105 REMARK 465 LEU C 106 REMARK 465 ASP C 107 REMARK 465 MET C 108 REMARK 465 LYS C 275 REMARK 465 GLY C 276 REMARK 465 GLU C 277 REMARK 465 LYS C 278 REMARK 465 SER C 279 REMARK 465 ASP C 280 REMARK 465 GLU C 281 REMARK 465 ASP C 282 REMARK 465 LYS C 283 REMARK 465 ASP C 284 REMARK 465 LYS C 285 REMARK 465 GLU C 286 REMARK 465 GLY C 287 REMARK 465 GLU C 288 REMARK 465 ALA C 289 REMARK 465 LEU C 290 REMARK 465 GLU C 291 REMARK 465 VAL C 292 REMARK 465 LYS C 293 REMARK 465 GLU C 294 REMARK 465 ASN C 295 REMARK 465 SER C 296 REMARK 465 TYR C 601 REMARK 465 GLY C 602 REMARK 465 LEU C 603 REMARK 465 LYS C 604 REMARK 465 PRO C 605 REMARK 465 PRO C 606 REMARK 465 THR C 607 REMARK 465 LEU C 608 REMARK 465 MET B 1 REMARK 465 ASP B 2 REMARK 465 PRO B 3 REMARK 465 LYS B 4 REMARK 465 ILE B 5 REMARK 465 SER B 6 REMARK 465 GLU B 7 REMARK 465 MET B 8 REMARK 465 HIS B 9 REMARK 465 PRO B 10 REMARK 465 ALA B 11 REMARK 465 LEU B 12 REMARK 465 ARG B 13 REMARK 465 LEU B 14 REMARK 465 VAL B 15 REMARK 465 ASP B 16 REMARK 465 PRO B 17 REMARK 465 GLN B 18 REMARK 465 ILE B 19 REMARK 465 GLN B 20 REMARK 465 LEU B 21 REMARK 465 ALA B 22 REMARK 465 VAL B 23 REMARK 465 THR B 24 REMARK 465 ARG B 25 REMARK 465 MET B 26 REMARK 465 GLU B 27 REMARK 465 ASN B 28 REMARK 465 ALA B 29 REMARK 465 VAL B 30 REMARK 465 GLY B 31 REMARK 465 ARG B 32 REMARK 465 ASP B 33 REMARK 465 GLN B 34 REMARK 465 ASN B 35 REMARK 465 ASN B 36 REMARK 465 VAL B 37 REMARK 465 GLY B 38 REMARK 465 PRO B 39 REMARK 465 LYS B 40 REMARK 465 VAL B 41 REMARK 465 TYR B 42 REMARK 465 THR B 79 REMARK 465 LYS B 80 REMARK 465 LEU B 81 REMARK 465 ALA B 82 REMARK 465 THR B 83 REMARK 465 THR B 84 REMARK 465 GLU B 85 REMARK 465 GLU B 86 REMARK 465 LEU B 87 REMARK 465 PRO B 88 REMARK 465 ASP B 89 REMARK 465 GLU B 90 REMARK 465 PHE B 91 REMARK 465 VAL B 92 REMARK 465 VAL B 93 REMARK 465 VAL B 94 REMARK 465 THR B 95 REMARK 465 VAL B 96 REMARK 465 LYS B 97 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET C 273 CG SD CE REMARK 470 LEU C 274 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH C 728 O HOH C 756 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR C 186 99.58 -66.81 REMARK 500 ASN C 202 68.74 -104.11 REMARK 500 ASN C 246 50.79 -110.81 REMARK 500 ILE C 268 -49.36 71.13 REMARK 500 ASN C 309 73.09 -103.76 REMARK 500 TYR C 327 40.83 -96.00 REMARK 500 ASN C 344 74.33 -102.91 REMARK 500 TRP C 523 -73.67 -94.39 REMARK 500 REMARK 500 REMARK: NULL DBREF 7DHG C 1 608 UNP O94826 TOM70_HUMAN 1 608 DBREF 7DHG B 1 97 UNP P0DTD2 ORF9B_SARS2 1 97 SEQRES 1 C 608 MET ALA ALA SER LYS PRO VAL GLU ALA ALA VAL VAL ALA SEQRES 2 C 608 ALA ALA VAL PRO SER SER GLY SER GLY VAL GLY GLY GLY SEQRES 3 C 608 GLY THR ALA GLY PRO GLY THR GLY GLY LEU PRO ARG TRP SEQRES 4 C 608 GLN LEU ALA LEU ALA VAL GLY ALA PRO LEU LEU LEU GLY SEQRES 5 C 608 ALA GLY ALA ILE TYR LEU TRP SER ARG GLN GLN ARG ARG SEQRES 6 C 608 ARG GLU ALA ARG GLY ARG GLY ASP ALA SER GLY LEU LYS SEQRES 7 C 608 ARG ASN SER GLU ARG LYS THR PRO GLU GLY ARG ALA SER SEQRES 8 C 608 PRO ALA PRO GLY SER GLY HIS PRO GLU GLY PRO GLY ALA SEQRES 9 C 608 HIS LEU ASP MET ASN SER LEU ASP ARG ALA GLN ALA ALA SEQRES 10 C 608 LYS ASN LYS GLY ASN LYS TYR PHE LYS ALA GLY LYS TYR SEQRES 11 C 608 GLU GLN ALA ILE GLN CYS TYR THR GLU ALA ILE SER LEU SEQRES 12 C 608 CYS PRO THR GLU LYS ASN VAL ASP LEU SER THR PHE TYR SEQRES 13 C 608 GLN ASN ARG ALA ALA ALA PHE GLU GLN LEU GLN LYS TRP SEQRES 14 C 608 LYS GLU VAL ALA GLN ASP CYS THR LYS ALA VAL GLU LEU SEQRES 15 C 608 ASN PRO LYS TYR VAL LYS ALA LEU PHE ARG ARG ALA LYS SEQRES 16 C 608 ALA HIS GLU LYS LEU ASP ASN LYS LYS GLU CYS LEU GLU SEQRES 17 C 608 ASP VAL THR ALA VAL CYS ILE LEU GLU GLY PHE GLN ASN SEQRES 18 C 608 GLN GLN SER MET LEU LEU ALA ASP LYS VAL LEU LYS LEU SEQRES 19 C 608 LEU GLY LYS GLU LYS ALA LYS GLU LYS TYR LYS ASN ARG SEQRES 20 C 608 GLU PRO LEU MET PRO SER PRO GLN PHE ILE LYS SER TYR SEQRES 21 C 608 PHE SER SER PHE THR ASP ASP ILE ILE SER GLN PRO MET SEQRES 22 C 608 LEU LYS GLY GLU LYS SER ASP GLU ASP LYS ASP LYS GLU SEQRES 23 C 608 GLY GLU ALA LEU GLU VAL LYS GLU ASN SER GLY TYR LEU SEQRES 24 C 608 LYS ALA LYS GLN TYR MET GLU GLU GLU ASN TYR ASP LYS SEQRES 25 C 608 ILE ILE SER GLU CYS SER LYS GLU ILE ASP ALA GLU GLY SEQRES 26 C 608 LYS TYR MET ALA GLU ALA LEU LEU LEU ARG ALA THR PHE SEQRES 27 C 608 TYR LEU LEU ILE GLY ASN ALA ASN ALA ALA LYS PRO ASP SEQRES 28 C 608 LEU ASP LYS VAL ILE SER LEU LYS GLU ALA ASN VAL LYS SEQRES 29 C 608 LEU ARG ALA ASN ALA LEU ILE LYS ARG GLY SER MET TYR SEQRES 30 C 608 MET GLN GLN GLN GLN PRO LEU LEU SER THR GLN ASP PHE SEQRES 31 C 608 ASN MET ALA ALA ASP ILE ASP PRO GLN ASN ALA ASP VAL SEQRES 32 C 608 TYR HIS HIS ARG GLY GLN LEU LYS ILE LEU LEU ASP GLN SEQRES 33 C 608 VAL GLU GLU ALA VAL ALA ASP PHE ASP GLU CYS ILE ARG SEQRES 34 C 608 LEU ARG PRO GLU SER ALA LEU ALA GLN ALA GLN LYS CYS SEQRES 35 C 608 PHE ALA LEU TYR ARG GLN ALA TYR THR GLY ASN ASN SER SEQRES 36 C 608 SER GLN ILE GLN ALA ALA MET LYS GLY PHE GLU GLU VAL SEQRES 37 C 608 ILE LYS LYS PHE PRO ARG CYS ALA GLU GLY TYR ALA LEU SEQRES 38 C 608 TYR ALA GLN ALA LEU THR ASP GLN GLN GLN PHE GLY LYS SEQRES 39 C 608 ALA ASP GLU MET TYR ASP LYS CYS ILE ASP LEU GLU PRO SEQRES 40 C 608 ASP ASN ALA THR THR TYR VAL HIS LYS GLY LEU LEU GLN SEQRES 41 C 608 LEU GLN TRP LYS GLN ASP LEU ASP ARG GLY LEU GLU LEU SEQRES 42 C 608 ILE SER LYS ALA ILE GLU ILE ASP ASN LYS CYS ASP PHE SEQRES 43 C 608 ALA TYR GLU THR MET GLY THR ILE GLU VAL GLN ARG GLY SEQRES 44 C 608 ASN MET GLU LYS ALA ILE ASP MET PHE ASN LYS ALA ILE SEQRES 45 C 608 ASN LEU ALA LYS SER GLU MET GLU MET ALA HIS LEU TYR SEQRES 46 C 608 SER LEU CYS ASP ALA ALA HIS ALA GLN THR GLU VAL ALA SEQRES 47 C 608 LYS LYS TYR GLY LEU LYS PRO PRO THR LEU SEQRES 1 B 97 MET ASP PRO LYS ILE SER GLU MET HIS PRO ALA LEU ARG SEQRES 2 B 97 LEU VAL ASP PRO GLN ILE GLN LEU ALA VAL THR ARG MET SEQRES 3 B 97 GLU ASN ALA VAL GLY ARG ASP GLN ASN ASN VAL GLY PRO SEQRES 4 B 97 LYS VAL TYR PRO ILE ILE LEU ARG LEU GLY SER PRO LEU SEQRES 5 B 97 SER LEU ASN MET ALA ARG LYS THR LEU ASN SER LEU GLU SEQRES 6 B 97 ASP LYS ALA PHE GLN LEU THR PRO ILE ALA VAL GLN MET SEQRES 7 B 97 THR LYS LEU ALA THR THR GLU GLU LEU PRO ASP GLU PHE SEQRES 8 B 97 VAL VAL VAL THR VAL LYS FORMUL 3 HOH *61(H2 O) HELIX 1 AA1 ASN C 109 ALA C 127 1 19 HELIX 2 AA2 LYS C 129 CYS C 144 1 16 HELIX 3 AA3 LYS C 148 LEU C 166 1 19 HELIX 4 AA4 LYS C 168 ASN C 183 1 16 HELIX 5 AA5 TYR C 186 LEU C 200 1 15 HELIX 6 AA6 ASN C 202 GLU C 217 1 16 HELIX 7 AA7 ASN C 221 ASN C 246 1 26 HELIX 8 AA8 SER C 253 SER C 263 1 11 HELIX 9 AA9 TYR C 298 GLU C 307 1 10 HELIX 10 AB1 ASN C 309 ASP C 311 5 3 HELIX 11 AB2 LYS C 312 GLU C 324 1 13 HELIX 12 AB3 TYR C 327 ILE C 342 1 16 HELIX 13 AB4 ASN C 344 LEU C 358 1 15 HELIX 14 AB5 ASN C 362 GLN C 380 1 19 HELIX 15 AB6 GLN C 382 ASP C 397 1 16 HELIX 16 AB7 ASN C 400 LEU C 414 1 15 HELIX 17 AB8 GLN C 416 ARG C 431 1 16 HELIX 18 AB9 SER C 434 ASN C 453 1 20 HELIX 19 AC1 ASN C 454 PHE C 472 1 19 HELIX 20 AC2 CYS C 475 GLN C 489 1 15 HELIX 21 AC3 GLN C 491 GLU C 506 1 16 HELIX 22 AC4 ASN C 509 TRP C 523 1 15 HELIX 23 AC5 ASP C 526 ASP C 541 1 16 HELIX 24 AC6 CYS C 544 GLY C 559 1 16 HELIX 25 AC7 ASN C 560 ASN C 573 1 14 HELIX 26 AC8 SER C 577 LYS C 599 1 23 HELIX 27 AC9 PRO B 51 LEU B 71 1 21 HELIX 28 AD1 THR B 72 MET B 78 1 7 CRYST1 54.655 79.438 124.027 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018297 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012588 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008063 0.00000