HEADER MOTOR PROTEIN 17-NOV-20 7DHW TITLE CRYSTAL STRUCTURE OF MYOSIN-XI MOTOR DOMAIN IN COMPLEX WITH ADP-ALF4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MOTOR DOMAIN OF MYOSIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1-738; COMPND 5 SYNONYM: ATMYA2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: XI-2, MYA2, AT5G43900, F6B6.4; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111 KEYWDS MYOSIN, MOTOR DOMAIN, ATPASE, ATP BINDING, MOTOR PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.SUZUKI,T.HARAGUCHI,M.TAMANAHA,K.YOSHIMURA,T.IMI,M.TOMINAGA, AUTHOR 2 H.SAKAYAMA,T.NISHIYAMA,K.ITO,T.MURATA REVDAT 5 29-NOV-23 7DHW 1 REMARK REVDAT 4 02-MAR-22 7DHW 1 JRNL REVDAT 3 23-FEB-22 7DHW 1 JRNL REVDAT 2 13-OCT-21 7DHW 1 AUTHOR JRNL REVDAT 1 19-MAY-21 7DHW 0 JRNL AUTH T.HARAGUCHI,M.TAMANAHA,K.SUZUKI,K.YOSHIMURA,T.IMI, JRNL AUTH 2 M.TOMINAGA,H.SAKAYAMA,T.NISHIYAMA,T.MURATA,K.ITO JRNL TITL DISCOVERY OF ULTRAFAST MYOSIN, ITS AMINO ACID SEQUENCE, AND JRNL TITL 2 STRUCTURAL FEATURES. JRNL REF PROC.NATL.ACAD.SCI.USA V. 119 2022 JRNL REFN ESSN 1091-6490 JRNL PMID 35173046 JRNL DOI 10.1073/PNAS.2120962119 REMARK 2 REMARK 2 RESOLUTION. 2.84 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.84 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 19613 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.231 REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.271 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3642 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.8100 - 8.2200 0.99 1260 141 0.1546 0.1651 REMARK 3 2 8.2200 - 6.6000 0.99 1268 135 0.1931 0.2585 REMARK 3 3 6.6000 - 5.7900 1.00 1269 140 0.2413 0.2630 REMARK 3 4 5.7900 - 5.2700 1.00 1263 140 0.2076 0.2381 REMARK 3 5 5.2700 - 4.9000 0.99 1262 140 0.1901 0.2315 REMARK 3 6 4.9000 - 4.6200 1.00 1293 142 0.1777 0.2242 REMARK 3 7 4.6200 - 4.3900 1.00 1279 144 0.1704 0.2455 REMARK 3 8 4.3900 - 4.2000 1.00 1268 139 0.1944 0.2627 REMARK 3 9 4.2000 - 4.0400 0.99 1251 147 0.1990 0.2939 REMARK 3 10 4.0400 - 3.9000 0.99 1241 143 0.2072 0.2289 REMARK 3 11 3.9000 - 3.7800 0.99 1285 143 0.2207 0.2966 REMARK 3 12 3.7800 - 3.6700 0.99 1232 133 0.2278 0.2871 REMARK 3 13 3.6700 - 3.5800 0.99 1278 140 0.2344 0.2453 REMARK 3 14 3.5800 - 3.4900 1.00 1263 144 0.2460 0.2845 REMARK 3 15 3.4900 - 3.4100 0.99 1257 141 0.2525 0.2909 REMARK 3 16 3.4100 - 3.3400 1.00 1256 141 0.2674 0.2779 REMARK 3 17 3.3400 - 3.2700 1.00 1290 141 0.2854 0.3810 REMARK 3 18 3.2700 - 3.2100 1.00 1232 142 0.2812 0.3298 REMARK 3 19 3.2100 - 3.1500 1.00 1306 147 0.2941 0.3549 REMARK 3 20 3.1500 - 3.1000 0.99 1264 138 0.3109 0.3797 REMARK 3 21 3.1000 - 3.0500 1.00 1228 140 0.3127 0.3195 REMARK 3 22 3.0500 - 3.0000 1.00 1310 141 0.3356 0.3805 REMARK 3 23 3.0000 - 2.9600 0.99 1245 132 0.3435 0.4200 REMARK 3 24 2.9600 - 2.9200 1.00 1256 138 0.3732 0.3728 REMARK 3 25 2.9200 - 2.8800 1.00 1267 143 0.4018 0.4494 REMARK 3 26 2.8800 - 2.8400 0.91 1156 127 0.3863 0.4558 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.428 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.560 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 61.13 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 80.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 5879 REMARK 3 ANGLE : 0.490 7952 REMARK 3 CHIRALITY : 0.040 878 REMARK 3 PLANARITY : 0.003 1031 REMARK 3 DIHEDRAL : 16.968 3552 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 58 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.6879 -45.5929 -6.7555 REMARK 3 T TENSOR REMARK 3 T11: 1.0763 T22: 1.0030 REMARK 3 T33: 0.8096 T12: -0.2251 REMARK 3 T13: 0.1080 T23: -0.0184 REMARK 3 L TENSOR REMARK 3 L11: 7.4757 L22: 1.9472 REMARK 3 L33: 1.6074 L12: -0.4427 REMARK 3 L13: -0.0683 L23: -1.4083 REMARK 3 S TENSOR REMARK 3 S11: -0.3840 S12: -0.9736 S13: -0.7570 REMARK 3 S21: -0.4693 S22: 0.3965 S23: -0.3908 REMARK 3 S31: 0.1208 S32: -0.5053 S33: -0.1257 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 59 THROUGH 131 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.4917 -47.0982 -16.1295 REMARK 3 T TENSOR REMARK 3 T11: 0.6110 T22: 0.2892 REMARK 3 T33: 0.4801 T12: -0.0051 REMARK 3 T13: 0.0151 T23: -0.0223 REMARK 3 L TENSOR REMARK 3 L11: 5.3328 L22: 3.6848 REMARK 3 L33: 3.4970 L12: -0.1589 REMARK 3 L13: 0.4408 L23: -0.4495 REMARK 3 S TENSOR REMARK 3 S11: 0.1234 S12: -0.0571 S13: -0.6737 REMARK 3 S21: 0.3199 S22: -0.0387 S23: -0.0445 REMARK 3 S31: 0.6994 S32: 0.0372 S33: -0.0459 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 132 THROUGH 312 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.0874 -26.8966 -18.0414 REMARK 3 T TENSOR REMARK 3 T11: 0.5913 T22: 0.3524 REMARK 3 T33: 0.3892 T12: 0.0035 REMARK 3 T13: 0.0141 T23: 0.0432 REMARK 3 L TENSOR REMARK 3 L11: 1.5398 L22: 2.5669 REMARK 3 L33: 1.5750 L12: 0.8946 REMARK 3 L13: 0.7982 L23: 0.2386 REMARK 3 S TENSOR REMARK 3 S11: 0.0284 S12: -0.0268 S13: -0.0051 REMARK 3 S21: 0.3083 S22: 0.0316 S23: -0.2118 REMARK 3 S31: -0.1754 S32: 0.1065 S33: -0.0968 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 313 THROUGH 489 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.2779 -12.7511 -22.5879 REMARK 3 T TENSOR REMARK 3 T11: 0.6035 T22: 0.3248 REMARK 3 T33: 0.3456 T12: 0.0139 REMARK 3 T13: -0.0372 T23: 0.0664 REMARK 3 L TENSOR REMARK 3 L11: 1.3009 L22: 1.6812 REMARK 3 L33: 1.6014 L12: 0.6399 REMARK 3 L13: 0.2111 L23: 0.4924 REMARK 3 S TENSOR REMARK 3 S11: -0.0695 S12: 0.1461 S13: 0.2734 REMARK 3 S21: -0.1929 S22: 0.0297 S23: 0.1402 REMARK 3 S31: -0.1898 S32: 0.0223 S33: 0.0159 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 490 THROUGH 543 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.7394 -6.8905 -27.9244 REMARK 3 T TENSOR REMARK 3 T11: 0.9810 T22: 0.6400 REMARK 3 T33: 0.7987 T12: 0.1316 REMARK 3 T13: -0.1473 T23: 0.0263 REMARK 3 L TENSOR REMARK 3 L11: 4.1979 L22: 4.9033 REMARK 3 L33: 1.3608 L12: 2.4134 REMARK 3 L13: 0.0027 L23: -0.6633 REMARK 3 S TENSOR REMARK 3 S11: -0.2699 S12: 0.2892 S13: 0.7641 REMARK 3 S21: 0.4107 S22: 0.3680 S23: 0.4732 REMARK 3 S31: -0.0531 S32: -0.0739 S33: -0.0924 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 544 THROUGH 620 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.0770 -9.4467 -28.0371 REMARK 3 T TENSOR REMARK 3 T11: 0.9965 T22: 0.5116 REMARK 3 T33: 0.6218 T12: -0.0422 REMARK 3 T13: 0.0223 T23: 0.0511 REMARK 3 L TENSOR REMARK 3 L11: 2.7598 L22: 1.5503 REMARK 3 L33: 1.4930 L12: 1.5536 REMARK 3 L13: 2.0203 L23: 1.0363 REMARK 3 S TENSOR REMARK 3 S11: -0.2497 S12: 0.3371 S13: 0.4475 REMARK 3 S21: -0.6967 S22: 0.2136 S23: 0.0867 REMARK 3 S31: -0.4836 S32: 0.3434 S33: 0.1285 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 621 THROUGH 736 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.1800 -49.1724 -34.9078 REMARK 3 T TENSOR REMARK 3 T11: 0.7891 T22: 0.6744 REMARK 3 T33: 0.5204 T12: -0.1352 REMARK 3 T13: -0.0089 T23: -0.0459 REMARK 3 L TENSOR REMARK 3 L11: 0.5762 L22: 2.3397 REMARK 3 L33: 2.0891 L12: 0.3990 REMARK 3 L13: 0.6314 L23: -0.3270 REMARK 3 S TENSOR REMARK 3 S11: -0.2074 S12: 0.4259 S13: -0.1002 REMARK 3 S21: -0.9114 S22: 0.1250 S23: 0.2698 REMARK 3 S31: 0.3060 S32: -0.2508 S33: 0.0254 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7DHW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-NOV-20. REMARK 100 THE DEPOSITION ID IS D_1300019029. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-APR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19625 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.840 REMARK 200 RESOLUTION RANGE LOW (A) : 19.810 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 5.580 REMARK 200 R MERGE (I) : 0.13200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.0900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 7.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 19.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.02800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 40.75 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1MND REMARK 200 REMARK 200 REMARK: THE ENTRY CONTAINS FRIEDEL PAIRS IN I_PLUS/MINUS COLUMNS. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MMT BUFFER (PH 6.0), 25% PEG REMARK 280 -1500, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.13850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 93.97850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.86250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 93.97850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.13850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.86250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -32 REMARK 465 ASP A -31 REMARK 465 TYR A -30 REMARK 465 LYS A -29 REMARK 465 ASP A -28 REMARK 465 ASP A -27 REMARK 465 ASP A -26 REMARK 465 ASP A -25 REMARK 465 LYS A -24 REMARK 465 ARG A -23 REMARK 465 SER A -22 REMARK 465 MET A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 ASP A -14 REMARK 465 TYR A -13 REMARK 465 ASP A -12 REMARK 465 ILE A -11 REMARK 465 PRO A -10 REMARK 465 THR A -9 REMARK 465 THR A -8 REMARK 465 GLU A -7 REMARK 465 ASN A -6 REMARK 465 LEU A -5 REMARK 465 TYR A -4 REMARK 465 PHE A -3 REMARK 465 GLN A -2 REMARK 465 GLY A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 ALA A 3 REMARK 465 ARG A 179 REMARK 465 ALA A 180 REMARK 465 ALA A 181 REMARK 465 ALA A 182 REMARK 465 GLU A 183 REMARK 465 GLY A 184 REMARK 465 ARG A 185 REMARK 465 SER A 737 REMARK 465 ALA A 738 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 4 CG OD1 ND2 REMARK 470 GLU A 26 CG CD OE1 OE2 REMARK 470 LYS A 36 CG CD CE NZ REMARK 470 VAL A 37 CG1 CG2 REMARK 470 LEU A 38 CG CD1 CD2 REMARK 470 LYS A 43 CE NZ REMARK 470 VAL A 46 CG1 CG2 REMARK 470 GLU A 58 CG CD OE1 OE2 REMARK 470 GLU A 188 CD OE1 OE2 REMARK 470 LYS A 226 CG CD CE NZ REMARK 470 LYS A 270 CG CD CE NZ REMARK 470 LYS A 277 CD CE NZ REMARK 470 LYS A 346 CE NZ REMARK 470 LYS A 427 CD CE NZ REMARK 470 GLU A 478 CG CD OE1 OE2 REMARK 470 LYS A 530 CG CD CE NZ REMARK 470 LYS A 533 CG CD CE NZ REMARK 470 ASP A 594 CG OD1 OD2 REMARK 470 SER A 596 OG REMARK 470 LYS A 600 CG CD CE NZ REMARK 470 SER A 691 OG REMARK 470 LYS A 698 CE NZ REMARK 470 LEU A 700 CD1 CD2 REMARK 470 LYS A 703 CE NZ REMARK 470 VAL A 704 CG1 CG2 REMARK 470 ARG A 736 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 230 OG SER A 426 2.13 REMARK 500 O TYR A 112 NH2 ARG A 171 2.16 REMARK 500 O GLU A 240 OH TYR A 254 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 21 -121.74 57.90 REMARK 500 LEU A 238 70.45 40.00 REMARK 500 LYS A 286 -4.35 72.23 REMARK 500 SER A 593 -2.66 76.86 REMARK 500 ASP A 595 45.30 39.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1102 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 163 OG1 REMARK 620 2 SER A 213 OG 89.2 REMARK 620 3 ADP A1104 O1B 80.3 163.2 REMARK 620 N 1 2 DBREF 7DHW A 1 738 UNP Q9LKB9 MYO6_ARATH 1 738 SEQADV 7DHW MET A -32 UNP Q9LKB9 INITIATING METHIONINE SEQADV 7DHW ASP A -31 UNP Q9LKB9 EXPRESSION TAG SEQADV 7DHW TYR A -30 UNP Q9LKB9 EXPRESSION TAG SEQADV 7DHW LYS A -29 UNP Q9LKB9 EXPRESSION TAG SEQADV 7DHW ASP A -28 UNP Q9LKB9 EXPRESSION TAG SEQADV 7DHW ASP A -27 UNP Q9LKB9 EXPRESSION TAG SEQADV 7DHW ASP A -26 UNP Q9LKB9 EXPRESSION TAG SEQADV 7DHW ASP A -25 UNP Q9LKB9 EXPRESSION TAG SEQADV 7DHW LYS A -24 UNP Q9LKB9 EXPRESSION TAG SEQADV 7DHW ARG A -23 UNP Q9LKB9 EXPRESSION TAG SEQADV 7DHW SER A -22 UNP Q9LKB9 EXPRESSION TAG SEQADV 7DHW MET A -21 UNP Q9LKB9 EXPRESSION TAG SEQADV 7DHW HIS A -20 UNP Q9LKB9 EXPRESSION TAG SEQADV 7DHW HIS A -19 UNP Q9LKB9 EXPRESSION TAG SEQADV 7DHW HIS A -18 UNP Q9LKB9 EXPRESSION TAG SEQADV 7DHW HIS A -17 UNP Q9LKB9 EXPRESSION TAG SEQADV 7DHW HIS A -16 UNP Q9LKB9 EXPRESSION TAG SEQADV 7DHW HIS A -15 UNP Q9LKB9 EXPRESSION TAG SEQADV 7DHW ASP A -14 UNP Q9LKB9 EXPRESSION TAG SEQADV 7DHW TYR A -13 UNP Q9LKB9 EXPRESSION TAG SEQADV 7DHW ASP A -12 UNP Q9LKB9 EXPRESSION TAG SEQADV 7DHW ILE A -11 UNP Q9LKB9 EXPRESSION TAG SEQADV 7DHW PRO A -10 UNP Q9LKB9 EXPRESSION TAG SEQADV 7DHW THR A -9 UNP Q9LKB9 EXPRESSION TAG SEQADV 7DHW THR A -8 UNP Q9LKB9 EXPRESSION TAG SEQADV 7DHW GLU A -7 UNP Q9LKB9 EXPRESSION TAG SEQADV 7DHW ASN A -6 UNP Q9LKB9 EXPRESSION TAG SEQADV 7DHW LEU A -5 UNP Q9LKB9 EXPRESSION TAG SEQADV 7DHW TYR A -4 UNP Q9LKB9 EXPRESSION TAG SEQADV 7DHW PHE A -3 UNP Q9LKB9 EXPRESSION TAG SEQADV 7DHW GLN A -2 UNP Q9LKB9 EXPRESSION TAG SEQADV 7DHW GLY A -1 UNP Q9LKB9 EXPRESSION TAG SEQADV 7DHW ALA A 0 UNP Q9LKB9 EXPRESSION TAG SEQRES 1 A 771 MET ASP TYR LYS ASP ASP ASP ASP LYS ARG SER MET HIS SEQRES 2 A 771 HIS HIS HIS HIS HIS ASP TYR ASP ILE PRO THR THR GLU SEQRES 3 A 771 ASN LEU TYR PHE GLN GLY ALA MET VAL ALA ASN PHE ASN SEQRES 4 A 771 PRO SER VAL GLY SER PHE VAL TRP VAL GLU ASP PRO ASP SEQRES 5 A 771 GLU ALA TRP ILE ASP GLY GLU VAL VAL GLN VAL ASN GLY SEQRES 6 A 771 ASP GLU ILE LYS VAL LEU CYS THR SER GLY LYS HIS VAL SEQRES 7 A 771 VAL THR LYS ILE SER ASN ALA TYR PRO LYS ASP VAL GLU SEQRES 8 A 771 ALA PRO ALA SER GLY VAL ASP ASP MET THR ARG LEU ALA SEQRES 9 A 771 TYR LEU HIS GLU PRO GLY VAL LEU GLN ASN LEU HIS SER SEQRES 10 A 771 ARG TYR ASP ILE ASN GLU ILE TYR THR TYR THR GLY SER SEQRES 11 A 771 ILE LEU ILE ALA VAL ASN PRO PHE ARG ARG LEU PRO HIS SEQRES 12 A 771 LEU TYR SER SER HIS MET MET ALA GLN TYR LYS GLY ALA SEQRES 13 A 771 SER LEU GLY GLU LEU SER PRO HIS PRO PHE ALA VAL ALA SEQRES 14 A 771 ASP ALA ALA TYR ARG GLN MET ILE ASN ASP GLY VAL SER SEQRES 15 A 771 GLN SER ILE LEU VAL SER GLY GLU SER GLY ALA GLY LYS SEQRES 16 A 771 THR GLU SER THR LYS LEU LEU MET ARG TYR LEU ALA TYR SEQRES 17 A 771 MET GLY GLY ARG ALA ALA ALA GLU GLY ARG SER VAL GLU SEQRES 18 A 771 GLN LYS VAL LEU GLU SER ASN PRO VAL LEU GLU ALA PHE SEQRES 19 A 771 GLY ASN ALA LYS THR VAL ARG ASN ASN ASN SER SER ARG SEQRES 20 A 771 PHE GLY LYS PHE VAL GLU ILE GLN PHE ASP GLU LYS GLY SEQRES 21 A 771 ARG ILE SER GLY ALA ALA ILE ARG THR TYR LEU LEU GLU SEQRES 22 A 771 ARG SER ARG VAL CYS GLN VAL SER ASP PRO GLU ARG ASN SEQRES 23 A 771 TYR HIS CYS PHE TYR MET LEU CYS ALA ALA PRO GLN GLU SEQRES 24 A 771 ASP VAL LYS LYS PHE LYS LEU GLU GLU PRO LYS LYS TYR SEQRES 25 A 771 HIS TYR LEU ASN GLN SER LYS CYS LEU GLU LEU ASP SER SEQRES 26 A 771 ILE ASN ASP ALA GLU GLU TYR HIS ALA THR ARG ARG ALA SEQRES 27 A 771 MET ASP VAL VAL GLY ILE SER THR GLU GLU GLN ASP ALA SEQRES 28 A 771 ILE PHE SER VAL VAL ALA ALA ILE LEU HIS ILE GLY ASN SEQRES 29 A 771 ILE GLU PHE ALA LYS GLY GLU GLU ILE ASP SER SER ILE SEQRES 30 A 771 PRO LYS ASP ASP LYS SER LEU PHE HIS LEU LYS THR ALA SEQRES 31 A 771 ALA GLU LEU LEU SER CYS ASP GLU LYS ALA LEU GLU ASP SEQRES 32 A 771 SER LEU CYS LYS ARG ILE MET VAL THR ARG ASP GLU THR SEQRES 33 A 771 ILE THR LYS THR LEU ASP PRO GLU ALA ALA THR LEU SER SEQRES 34 A 771 ARG ASP ALA LEU ALA LYS VAL MET TYR SER ARG LEU PHE SEQRES 35 A 771 ASP TRP LEU VAL ASP LYS ILE ASN SER SER ILE GLY GLN SEQRES 36 A 771 ASP HIS ASP SER LYS TYR LEU ILE GLY VAL LEU ASP ILE SEQRES 37 A 771 TYR GLY PHE GLU SER PHE LYS THR ASN SER PHE GLU GLN SEQRES 38 A 771 PHE CYS ILE ASN LEU THR ASN GLU LYS LEU GLN GLN HIS SEQRES 39 A 771 PHE ASN GLN HIS VAL PHE LYS MET GLU GLN GLU GLU TYR SEQRES 40 A 771 LYS LYS GLU GLU ILE ASN TRP SER TYR ILE GLU PHE VAL SEQRES 41 A 771 ASP ASN GLN ASP ILE LEU ASP LEU ILE GLU LYS LYS PRO SEQRES 42 A 771 GLY GLY ILE ILE ALA LEU LEU ASP GLU ALA CYS MET PHE SEQRES 43 A 771 PRO ARG SER THR HIS GLU THR PHE ALA GLN LYS LEU TYR SEQRES 44 A 771 GLN THR PHE LYS THR HIS LYS ARG PHE THR LYS PRO LYS SEQRES 45 A 771 LEU ALA ARG SER ASP PHE THR ILE CYS HIS TYR ALA GLY SEQRES 46 A 771 ASP VAL THR TYR GLN THR GLU LEU PHE LEU ASP LYS ASN SEQRES 47 A 771 LYS ASP TYR VAL ILE ALA GLU HIS GLN ALA LEU LEU ASN SEQRES 48 A 771 SER SER SER CYS SER PHE VAL ALA SER LEU PHE PRO PRO SEQRES 49 A 771 MET SER ASP ASP SER LYS GLN SER LYS PHE SER SER ILE SEQRES 50 A 771 GLY THR ARG PHE LYS GLN GLN LEU VAL SER LEU LEU GLU SEQRES 51 A 771 ILE LEU ASN THR THR GLU PRO HIS TYR ILE ARG CYS ILE SEQRES 52 A 771 LYS PRO ASN ASN LEU LEU LYS PRO GLY ILE PHE GLU ASN SEQRES 53 A 771 GLU ASN ILE LEU GLN GLN LEU ARG CYS GLY GLY VAL MET SEQRES 54 A 771 GLU ALA ILE ARG ILE SER CYS ALA GLY TYR PRO THR ARG SEQRES 55 A 771 LYS HIS PHE ASP GLU PHE LEU ALA ARG PHE GLY ILE LEU SEQRES 56 A 771 ALA PRO GLU VAL LEU VAL LYS ASN SER ASP ASP PRO ALA SEQRES 57 A 771 ALA CYS LYS LYS LEU LEU ASP LYS VAL GLY LEU GLU GLY SEQRES 58 A 771 TYR GLN ILE GLY LYS THR LYS VAL PHE LEU ARG ALA GLY SEQRES 59 A 771 GLN MET ALA ASP LEU ASP THR ARG ARG THR GLU VAL LEU SEQRES 60 A 771 GLY ARG SER ALA HET MG A1101 1 HET MG A1102 1 HET ALF A1103 5 HET ADP A1104 27 HET GOL A1105 6 HET GOL A1106 6 HET GOL A1107 6 HET GOL A1108 6 HETNAM MG MAGNESIUM ION HETNAM ALF TETRAFLUOROALUMINATE ION HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 MG 2(MG 2+) FORMUL 4 ALF AL F4 1- FORMUL 5 ADP C10 H15 N5 O10 P2 FORMUL 6 GOL 4(C3 H8 O3) FORMUL 10 HOH *11(H2 O) HELIX 1 AA1 ASP A 66 LEU A 70 5 5 HELIX 2 AA2 HIS A 74 ILE A 88 1 15 HELIX 3 AA3 PRO A 109 TYR A 112 5 4 HELIX 4 AA4 SER A 113 TYR A 120 1 8 HELIX 5 AA5 HIS A 131 GLY A 147 1 17 HELIX 6 AA6 GLY A 161 GLY A 178 1 18 HELIX 7 AA7 VAL A 187 GLY A 202 1 16 HELIX 8 AA8 ARG A 241 CYS A 245 5 5 HELIX 9 AA9 TYR A 254 ALA A 262 1 9 HELIX 10 AB1 GLU A 275 LYS A 278 5 4 HELIX 11 AB2 TYR A 279 GLN A 284 1 6 HELIX 12 AB3 ASN A 294 GLY A 310 1 17 HELIX 13 AB4 SER A 312 ASN A 331 1 20 HELIX 14 AB5 ASP A 347 LEU A 361 1 15 HELIX 15 AB6 ASP A 364 LYS A 374 1 11 HELIX 16 AB7 ASP A 389 GLY A 421 1 33 HELIX 17 AB8 SER A 445 PHE A 467 1 23 HELIX 18 AB9 PHE A 467 GLU A 477 1 11 HELIX 19 AC1 ASN A 489 LYS A 498 1 10 HELIX 20 AC2 GLY A 502 PHE A 513 1 12 HELIX 21 AC3 THR A 517 PHE A 529 1 13 HELIX 22 AC4 LEU A 560 ASN A 565 1 6 HELIX 23 AC5 ILE A 570 SER A 579 1 10 HELIX 24 AC6 CYS A 582 SER A 587 1 6 HELIX 25 AC7 ILE A 604 ASN A 620 1 17 HELIX 26 AC8 GLU A 642 GLY A 653 1 12 HELIX 27 AC9 GLY A 654 GLY A 665 1 12 HELIX 28 AD1 PHE A 672 GLY A 680 1 9 HELIX 29 AD2 ASP A 693 GLY A 705 1 13 HELIX 30 AD3 GLY A 721 ARG A 736 1 16 SHEET 1 AA1 5 HIS A 44 LYS A 48 0 SHEET 2 AA1 5 GLU A 34 CYS A 39 -1 N VAL A 37 O VAL A 45 SHEET 3 AA1 5 TRP A 22 VAL A 30 -1 N VAL A 28 O LYS A 36 SHEET 4 AA1 5 PHE A 12 GLU A 16 -1 N VAL A 15 O ILE A 23 SHEET 5 AA1 5 TYR A 53 PRO A 54 -1 O TYR A 53 N TRP A 14 SHEET 1 AA2 7 TYR A 92 THR A 95 0 SHEET 2 AA2 7 ILE A 98 VAL A 102 -1 O ILE A 98 N THR A 95 SHEET 3 AA2 7 GLU A 623 ILE A 630 1 O ARG A 628 N LEU A 99 SHEET 4 AA2 7 GLN A 150 SER A 155 1 N LEU A 153 O HIS A 625 SHEET 5 AA2 7 TYR A 428 ASP A 434 1 O LEU A 433 N ILE A 152 SHEET 6 AA2 7 GLY A 216 PHE A 223 -1 N LYS A 217 O ASP A 434 SHEET 7 AA2 7 ILE A 229 TYR A 237 -1 O ALA A 233 N GLU A 220 SHEET 1 AA3 2 ASN A 203 ALA A 204 0 SHEET 2 AA3 2 SER A 212 SER A 213 -1 O SER A 212 N ALA A 204 SHEET 1 AA4 2 PHE A 334 LYS A 336 0 SHEET 2 AA4 2 SER A 343 PRO A 345 -1 O ILE A 344 N ALA A 335 SHEET 1 AA5 2 ILE A 376 MET A 377 0 SHEET 2 AA5 2 ILE A 384 THR A 385 -1 O ILE A 384 N MET A 377 SHEET 1 AA6 3 PHE A 535 THR A 536 0 SHEET 2 AA6 3 ASP A 544 HIS A 549 -1 O THR A 546 N THR A 536 SHEET 3 AA6 3 GLY A 552 GLN A 557 -1 O TYR A 556 N PHE A 545 SHEET 1 AA7 2 LYS A 566 ASP A 567 0 SHEET 2 AA7 2 SER A 602 SER A 603 -1 O SER A 602 N ASP A 567 SHEET 1 AA8 3 THR A 668 HIS A 671 0 SHEET 2 AA8 3 LYS A 715 LEU A 718 -1 O LEU A 718 N THR A 668 SHEET 3 AA8 3 GLN A 710 ILE A 711 -1 N GLN A 710 O PHE A 717 LINK OG1 THR A 163 MG MG A1102 1555 1555 1.99 LINK OG SER A 213 MG MG A1102 1555 1555 2.26 LINK MG MG A1102 O1B ADP A1104 1555 1555 2.13 CRYST1 58.277 73.725 187.957 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017159 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013564 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005320 0.00000