HEADER BIOSYNTHETIC PROTEIN 18-NOV-20 7DIB TITLE CRYSTAL STRUCTURE OF D-THREONINE ALDOLASE FROM FILOMICROBIUM MARINUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: D-THREONINE ALDOLASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 4.1.2.42; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: THE SEQUENCE "MGSSHHHHHHSSGLVPRGSH" ARE DERIVED FROM COMPND 7 PET28A VECTOR. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANDIDATUS FILOMICROBIUM MARINUM; SOURCE 3 ORGANISM_TAXID: 1608628; SOURCE 4 GENE: YBN1229_V1_3680; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS ALDOLASE, PLP-DEPENDENT ENZYME, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.SEO,K.-J.KIM REVDAT 2 29-NOV-23 7DIB 1 REMARK REVDAT 1 04-AUG-21 7DIB 0 JRNL AUTH S.-H.PARK,H.SEO,J.SEOK,H.KIM,K.K.KWON,S.-J.YEOM,S.-G.LEE, JRNL AUTH 2 K.-J.KIM JRNL TITL CBETA-SELECTIVE ALDOL ADDITION OF D-THREONINE ALDOLASE BY JRNL TITL 2 SPATIAL CONSTRAINT OF ALDEHYDE BINDING. JRNL REF ACS CATALYSIS V. 11 6892 2021 JRNL REFN ESSN 2155-5435 JRNL DOI 10.1021/ACSCATAL.1C01348 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.30 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 3 NUMBER OF REFLECTIONS : 39459 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1988 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.25 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2680 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.75 REMARK 3 BIN R VALUE (WORKING SET) : 0.3000 REMARK 3 BIN FREE R VALUE SET COUNT : 148 REMARK 3 BIN FREE R VALUE : 0.3340 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5560 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 64 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.23000 REMARK 3 B22 (A**2) : -0.82000 REMARK 3 B33 (A**2) : 0.59000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.276 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.217 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.183 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.593 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.935 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.907 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5672 ; 0.008 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 5313 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7707 ; 1.567 ; 1.635 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12259 ; 1.248 ; 1.577 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 737 ; 7.604 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 298 ;33.240 ;21.208 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 886 ;17.849 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 51 ;22.875 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 739 ; 0.065 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6517 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1186 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7DIB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-NOV-20. REMARK 100 THE DEPOSITION ID IS D_1300019452. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-SEP-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 7A (6B, 6C1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41469 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.39800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4V15 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 400, SODIUM ACETATE TRIBASIC, REMARK 280 CADMIUM CHLORIDE HYDRATE, PH 4.6, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 35.48250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 89.02550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.48250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 89.02550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 ALA A 256 REMARK 465 GLY A 257 REMARK 465 GLY A 258 REMARK 465 ASP A 259 REMARK 465 GLU A 358 REMARK 465 GLY A 359 REMARK 465 ASP A 360 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 ARG B 2 REMARK 465 GLU B 358 REMARK 465 GLY B 359 REMARK 465 ASP B 360 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LEU A 326 C PRO A 327 N 0.156 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 327 C - N - CA ANGL. DEV. = 11.2 DEGREES REMARK 500 PRO A 327 C - N - CD ANGL. DEV. = -13.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 41 55.01 38.61 REMARK 500 ARG A 147 -99.12 -106.51 REMARK 500 ALA A 221 140.71 77.41 REMARK 500 MET A 246 159.00 77.96 REMARK 500 ARG A 276 83.81 -152.83 REMARK 500 SER A 295 43.15 -107.77 REMARK 500 ARG A 303 76.70 -156.99 REMARK 500 ASP B 22 96.60 -68.87 REMARK 500 ARG B 110 98.21 -69.41 REMARK 500 ARG B 147 -91.29 -109.27 REMARK 500 ALA B 221 145.85 73.78 REMARK 500 PHE B 245 -62.45 -107.87 REMARK 500 MET B 246 153.86 79.58 REMARK 500 ASP B 302 54.60 33.29 REMARK 500 ARG B 310 60.35 36.52 REMARK 500 REMARK 500 REMARK: NULL DBREF1 7DIB A 1 376 UNP A0A0D6JKM4_9RHIZ DBREF2 7DIB A A0A0D6JKM4 1 376 DBREF1 7DIB B 1 376 UNP A0A0D6JKM4_9RHIZ DBREF2 7DIB B A0A0D6JKM4 1 376 SEQADV 7DIB MET A -19 UNP A0A0D6JKM INITIATING METHIONINE SEQADV 7DIB GLY A -18 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB SER A -17 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB SER A -16 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB HIS A -15 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB HIS A -14 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB HIS A -13 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB HIS A -12 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB HIS A -11 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB HIS A -10 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB SER A -9 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB SER A -8 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB GLY A -7 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB LEU A -6 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB VAL A -5 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB PRO A -4 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB ARG A -3 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB GLY A -2 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB SER A -1 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB HIS A 0 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB MET B -19 UNP A0A0D6JKM INITIATING METHIONINE SEQADV 7DIB GLY B -18 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB SER B -17 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB SER B -16 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB HIS B -15 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB HIS B -14 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB HIS B -13 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB HIS B -12 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB HIS B -11 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB HIS B -10 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB SER B -9 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB SER B -8 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB GLY B -7 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB LEU B -6 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB VAL B -5 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB PRO B -4 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB ARG B -3 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB GLY B -2 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB SER B -1 UNP A0A0D6JKM EXPRESSION TAG SEQADV 7DIB HIS B 0 UNP A0A0D6JKM EXPRESSION TAG SEQRES 1 A 396 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 396 LEU VAL PRO ARG GLY SER HIS MET ARG ALA PRO ALA ARG SEQRES 3 A 396 LEU GLY ILE PRO LEU ALA ASP VAL ASP THR PRO ALA LEU SEQRES 4 A 396 ILE LEU ASP LEU ASP ALA PHE GLU ARG ASN LEU GLN THR SEQRES 5 A 396 MET ALA ASP TRP ALA LYS SER LYS ASN VAL ARG LEU ARG SEQRES 6 A 396 PRO HIS ALA LLP SER HIS LYS CYS PRO ALA ILE ALA HIS SEQRES 7 A 396 ARG GLN MET ALA LEU GLY ALA VAL GLY VAL CYS CYS GLN SEQRES 8 A 396 LYS VAL SER GLU ALA GLU VAL MET VAL ASP ALA GLY ILE SEQRES 9 A 396 THR ASN VAL LEU ILE SER ASN GLU VAL VAL GLY ARG THR SEQRES 10 A 396 LYS LEU GLU ALA LEU ALA GLN LEU ALA LEU ARG ALA ARG SEQRES 11 A 396 MET GLY VAL CYS VAL ASP ASP ILE ARG GLN ILE ARG ASP SEQRES 12 A 396 LEU SER GLU ALA MET HIS ALA ALA GLY ALA THR ILE ASP SEQRES 13 A 396 VAL LEU VAL GLU ILE ASN ILE GLY GLY ASN ARG CYS GLY SEQRES 14 A 396 VAL GLU PRO GLY ASP PRO ALA VAL ARG LEU GLY ALA ALA SEQRES 15 A 396 VAL ALA GLN ALA ASP GLY LEU ARG PHE ALA GLY LEU GLN SEQRES 16 A 396 SER TYR ASP GLY ILE THR GLN HIS VAL ARG ASP PRO ASP SEQRES 17 A 396 GLU ARG LYS ALA ARG ALA ALA ARG ALA GLY ASP VAL THR SEQRES 18 A 396 ALA GLN THR ILE ALA ALA LEU ARG ASP ILE GLY LEU GLU SEQRES 19 A 396 CYS GLU THR VAL GLY GLY ALA GLY THR GLY SER PHE ALA SEQRES 20 A 396 PHE ASP GLY MET SER GLY VAL TRP ASN GLU LEU GLN PRO SEQRES 21 A 396 GLY SER TYR ALA PHE MET ASP ALA ASP TYR ALA ARG ASN SEQRES 22 A 396 THR PRO ALA GLY GLY ASP VAL PRO LYS PHE GLU HIS ALA SEQRES 23 A 396 MET PHE VAL TRP ALA ILE VAL MET SER ARG THR SER VAL SEQRES 24 A 396 GLY GLN ALA VAL VAL ASP ALA GLY HIS LYS VAL LEU PRO SEQRES 25 A 396 ILE ASP SER GLY MET PRO VAL PRO PHE ASP ARG PRO GLY SEQRES 26 A 396 VAL ARG TYR GLU ARG PRO SER ASP GLU HIS GLY CYS LEU SEQRES 27 A 396 VAL ALA GLU LEU ASP SER ALA LEU PRO ASP LEU GLY GLU SEQRES 28 A 396 LYS ILE LEU ILE VAL PRO SER HIS VAL ASP PRO THR ALA SEQRES 29 A 396 ASN GLN HIS ASP PHE PHE ILE GLY VAL ARG GLY MET ALA SEQRES 30 A 396 GLU GLY ASP GLY THR VAL GLN GLU ILE TRP PRO VAL THR SEQRES 31 A 396 ALA ARG GLY CYS VAL PHE SEQRES 1 B 396 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 396 LEU VAL PRO ARG GLY SER HIS MET ARG ALA PRO ALA ARG SEQRES 3 B 396 LEU GLY ILE PRO LEU ALA ASP VAL ASP THR PRO ALA LEU SEQRES 4 B 396 ILE LEU ASP LEU ASP ALA PHE GLU ARG ASN LEU GLN THR SEQRES 5 B 396 MET ALA ASP TRP ALA LYS SER LYS ASN VAL ARG LEU ARG SEQRES 6 B 396 PRO HIS ALA LLP SER HIS LYS CYS PRO ALA ILE ALA HIS SEQRES 7 B 396 ARG GLN MET ALA LEU GLY ALA VAL GLY VAL CYS CYS GLN SEQRES 8 B 396 LYS VAL SER GLU ALA GLU VAL MET VAL ASP ALA GLY ILE SEQRES 9 B 396 THR ASN VAL LEU ILE SER ASN GLU VAL VAL GLY ARG THR SEQRES 10 B 396 LYS LEU GLU ALA LEU ALA GLN LEU ALA LEU ARG ALA ARG SEQRES 11 B 396 MET GLY VAL CYS VAL ASP ASP ILE ARG GLN ILE ARG ASP SEQRES 12 B 396 LEU SER GLU ALA MET HIS ALA ALA GLY ALA THR ILE ASP SEQRES 13 B 396 VAL LEU VAL GLU ILE ASN ILE GLY GLY ASN ARG CYS GLY SEQRES 14 B 396 VAL GLU PRO GLY ASP PRO ALA VAL ARG LEU GLY ALA ALA SEQRES 15 B 396 VAL ALA GLN ALA ASP GLY LEU ARG PHE ALA GLY LEU GLN SEQRES 16 B 396 SER TYR ASP GLY ILE THR GLN HIS VAL ARG ASP PRO ASP SEQRES 17 B 396 GLU ARG LYS ALA ARG ALA ALA ARG ALA GLY ASP VAL THR SEQRES 18 B 396 ALA GLN THR ILE ALA ALA LEU ARG ASP ILE GLY LEU GLU SEQRES 19 B 396 CYS GLU THR VAL GLY GLY ALA GLY THR GLY SER PHE ALA SEQRES 20 B 396 PHE ASP GLY MET SER GLY VAL TRP ASN GLU LEU GLN PRO SEQRES 21 B 396 GLY SER TYR ALA PHE MET ASP ALA ASP TYR ALA ARG ASN SEQRES 22 B 396 THR PRO ALA GLY GLY ASP VAL PRO LYS PHE GLU HIS ALA SEQRES 23 B 396 MET PHE VAL TRP ALA ILE VAL MET SER ARG THR SER VAL SEQRES 24 B 396 GLY GLN ALA VAL VAL ASP ALA GLY HIS LYS VAL LEU PRO SEQRES 25 B 396 ILE ASP SER GLY MET PRO VAL PRO PHE ASP ARG PRO GLY SEQRES 26 B 396 VAL ARG TYR GLU ARG PRO SER ASP GLU HIS GLY CYS LEU SEQRES 27 B 396 VAL ALA GLU LEU ASP SER ALA LEU PRO ASP LEU GLY GLU SEQRES 28 B 396 LYS ILE LEU ILE VAL PRO SER HIS VAL ASP PRO THR ALA SEQRES 29 B 396 ASN GLN HIS ASP PHE PHE ILE GLY VAL ARG GLY MET ALA SEQRES 30 B 396 GLU GLY ASP GLY THR VAL GLN GLU ILE TRP PRO VAL THR SEQRES 31 B 396 ALA ARG GLY CYS VAL PHE MODRES 7DIB LLP A 49 LYS MODIFIED RESIDUE MODRES 7DIB LLP B 49 LYS MODIFIED RESIDUE HET LLP A 49 24 HET LLP B 49 24 HETNAM LLP (2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5- HETNAM 2 LLP (PHOSPHONOOXYMETHYL)PYRIDIN-4- HETNAM 3 LLP YL]METHYLIDENEAMINO]HEXANOIC ACID HETSYN LLP N'-PYRIDOXYL-LYSINE-5'-MONOPHOSPHATE FORMUL 1 LLP 2(C14 H22 N3 O7 P) FORMUL 3 HOH *64(H2 O) HELIX 1 AA1 PRO A 10 VAL A 14 5 5 HELIX 2 AA2 LEU A 23 LYS A 40 1 18 HELIX 3 AA3 CYS A 53 ALA A 62 1 10 HELIX 4 AA4 LYS A 72 ALA A 82 1 11 HELIX 5 AA5 GLY A 95 LEU A 107 1 13 HELIX 6 AA6 ASP A 117 ALA A 131 1 15 HELIX 7 AA7 GLY A 153 ALA A 166 1 14 HELIX 8 AA8 ILE A 180 VAL A 184 5 5 HELIX 9 AA9 ASP A 186 ASP A 210 1 25 HELIX 10 AB1 SER A 225 SER A 232 1 8 HELIX 11 AB2 GLY A 241 PHE A 245 5 5 HELIX 12 AB3 ASP A 247 ARG A 252 1 6 HELIX 13 AB4 LEU A 322 LEU A 326 5 5 HELIX 14 AB5 HIS A 339 ASN A 345 1 7 HELIX 15 AB6 PRO B 10 VAL B 14 5 5 HELIX 16 AB7 LEU B 23 LYS B 40 1 18 HELIX 17 AB8 CYS B 53 LEU B 63 1 11 HELIX 18 AB9 LYS B 72 ALA B 82 1 11 HELIX 19 AC1 GLY B 95 LEU B 107 1 13 HELIX 20 AC2 ASP B 117 GLY B 132 1 16 HELIX 21 AC3 GLY B 153 ALA B 166 1 14 HELIX 22 AC4 ASP B 178 HIS B 183 1 6 HELIX 23 AC5 ASP B 186 ASP B 210 1 25 HELIX 24 AC6 SER B 225 SER B 232 1 8 HELIX 25 AC7 GLY B 241 PHE B 245 5 5 HELIX 26 AC8 ASP B 247 ARG B 252 1 6 HELIX 27 AC9 LEU B 322 LEU B 326 5 5 HELIX 28 AD1 HIS B 339 ASN B 345 1 7 SHEET 1 AA1 6 VAL A 299 PRO A 300 0 SHEET 2 AA1 6 LYS A 332 VAL A 336 -1 O VAL A 336 N VAL A 299 SHEET 3 AA1 6 MET A 267 SER A 275 -1 N VAL A 269 O ILE A 335 SHEET 4 AA1 6 GLN A 281 VAL A 284 -1 O VAL A 283 N SER A 275 SHEET 5 AA1 6 GLY A 316 VAL A 319 -1 O LEU A 318 N ALA A 282 SHEET 6 AA1 6 ARG A 307 GLU A 309 -1 N ARG A 307 O VAL A 319 SHEET 1 AA2 6 VAL A 299 PRO A 300 0 SHEET 2 AA2 6 LYS A 332 VAL A 336 -1 O VAL A 336 N VAL A 299 SHEET 3 AA2 6 MET A 267 SER A 275 -1 N VAL A 269 O ILE A 335 SHEET 4 AA2 6 ALA A 18 ASP A 22 -1 N ILE A 20 O PHE A 268 SHEET 5 AA2 6 PHE A 349 ARG A 354 1 O ILE A 351 N LEU A 19 SHEET 6 AA2 6 THR A 362 PRO A 368 -1 O TRP A 367 N PHE A 350 SHEET 1 AA3 8 ARG A 43 LEU A 44 0 SHEET 2 AA3 8 GLU A 237 LEU A 238 1 O LEU A 238 N ARG A 43 SHEET 3 AA3 8 THR A 217 GLY A 220 1 O VAL A 218 N GLU A 237 SHEET 4 AA3 8 LEU A 169 SER A 176 1 N LEU A 174 O GLY A 219 SHEET 5 AA3 8 ILE A 135 GLU A 140 1 N VAL A 137 O ALA A 172 SHEET 6 AA3 8 ARG A 110 VAL A 115 1 N VAL A 115 O GLU A 140 SHEET 7 AA3 8 ASN A 86 ILE A 89 1 N ILE A 89 O GLY A 112 SHEET 8 AA3 8 VAL A 68 CYS A 70 1 N VAL A 68 O LEU A 88 SHEET 1 AA4 6 VAL B 299 PRO B 300 0 SHEET 2 AA4 6 LYS B 332 VAL B 336 -1 O VAL B 336 N VAL B 299 SHEET 3 AA4 6 MET B 267 SER B 275 -1 N VAL B 269 O ILE B 335 SHEET 4 AA4 6 GLN B 281 VAL B 284 -1 O VAL B 283 N SER B 275 SHEET 5 AA4 6 GLY B 316 ALA B 320 -1 O LEU B 318 N ALA B 282 SHEET 6 AA4 6 VAL B 306 GLU B 309 -1 N GLU B 309 O CYS B 317 SHEET 1 AA5 6 VAL B 299 PRO B 300 0 SHEET 2 AA5 6 LYS B 332 VAL B 336 -1 O VAL B 336 N VAL B 299 SHEET 3 AA5 6 MET B 267 SER B 275 -1 N VAL B 269 O ILE B 335 SHEET 4 AA5 6 ALA B 18 ASP B 22 -1 N ALA B 18 O TRP B 270 SHEET 5 AA5 6 PHE B 349 ARG B 354 1 O ILE B 351 N LEU B 19 SHEET 6 AA5 6 THR B 362 PRO B 368 -1 O TRP B 367 N PHE B 350 SHEET 1 AA6 8 ARG B 43 LEU B 44 0 SHEET 2 AA6 8 GLU B 237 LEU B 238 1 O LEU B 238 N ARG B 43 SHEET 3 AA6 8 THR B 217 GLY B 220 1 O VAL B 218 N GLU B 237 SHEET 4 AA6 8 LEU B 169 SER B 176 1 N LEU B 174 O GLY B 219 SHEET 5 AA6 8 ILE B 135 ILE B 141 1 N VAL B 139 O GLY B 173 SHEET 6 AA6 8 ARG B 110 VAL B 115 1 N VAL B 115 O GLU B 140 SHEET 7 AA6 8 ASN B 86 ILE B 89 1 N ILE B 89 O GLY B 112 SHEET 8 AA6 8 VAL B 68 CYS B 70 1 N VAL B 68 O LEU B 88 LINK C ALA A 48 N LLP A 49 1555 1555 1.34 LINK C LLP A 49 N SER A 50 1555 1555 1.33 LINK C ALA B 48 N LLP B 49 1555 1555 1.34 LINK C LLP B 49 N SER B 50 1555 1555 1.33 CISPEP 1 THR A 16 PRO A 17 0 -10.04 CISPEP 2 THR B 16 PRO B 17 0 -5.13 CRYST1 70.965 178.051 65.458 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014091 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005616 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015277 0.00000