HEADER VIRAL PROTEIN 10-DEC-20 7DNU TITLE MRNA-DECAPPING ENZYME G5RP WITH INHIBITOR INSP6 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: MRNA-DECAPPING PROTEIN G5R; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: G5RP,ASFV-DP,DIPHOSPHOINOSITOL POLYPHOSPHATE COMPND 5 PHOSPHOHYDROLASE,DIPP; COMPND 6 EC: 3.1.3.-,3.6.1.52; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AFRICAN SWINE FEVER VIRUS (STRAIN BADAJOZ 1971 SOURCE 3 VERO-ADAPTED); SOURCE 4 ORGANISM_COMMON: BA71V; SOURCE 5 ORGANISM_TAXID: 10498; SOURCE 6 GENE: BA71V-102, D250R; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MRNA-DECAPPING ENZYME G5RP WITH INHIBITOR INSP6 COMPLEX, VIRAL KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.YANG,C.CHEN,L.LI,X.H.LI,D.SU REVDAT 3 29-NOV-23 7DNU 1 REMARK REVDAT 2 28-DEC-22 7DNU 1 JRNL REVDAT 1 15-DEC-21 7DNU 0 JRNL AUTH Y.YANG,C.ZHANG,X.LI,L.LI,Y.CHEN,X.YANG,Y.ZHAO,C.CHEN,W.WANG, JRNL AUTH 2 Z.ZHONG,C.YANG,Z.HUANG,D.SU JRNL TITL STRUCTURAL INSIGHT INTO MOLECULAR INHIBITORY MECHANISM OF JRNL TITL 2 INSP 6 ON AFRICAN SWINE FEVER VIRUS MRNA-DECAPPING ENZYME JRNL TITL 3 G5RP. JRNL REF J.VIROL. V. 96 90521 2022 JRNL REFN ESSN 1098-5514 JRNL PMID 35481780 JRNL DOI 10.1128/JVI.01905-21 REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2_3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 13354 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 674 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 23.9200 - 3.8345 0.99 2706 156 0.1519 0.1953 REMARK 3 2 3.8345 - 3.0456 1.00 2565 116 0.1619 0.2420 REMARK 3 3 3.0456 - 2.6612 1.00 2495 144 0.2048 0.2963 REMARK 3 4 2.6612 - 2.4181 0.99 2449 137 0.2063 0.2511 REMARK 3 5 2.4181 - 2.2450 0.99 2465 121 0.2048 0.2706 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.840 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 19 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.1178 3.5415 88.9455 REMARK 3 T TENSOR REMARK 3 T11: 0.2430 T22: 0.2381 REMARK 3 T33: 0.1644 T12: 0.0311 REMARK 3 T13: -0.0053 T23: 0.0169 REMARK 3 L TENSOR REMARK 3 L11: 0.5659 L22: 1.2018 REMARK 3 L33: 0.9618 L12: 0.2408 REMARK 3 L13: -0.6276 L23: 0.3532 REMARK 3 S TENSOR REMARK 3 S11: -0.1178 S12: 0.1158 S13: 0.4896 REMARK 3 S21: -0.0020 S22: -0.0483 S23: -0.2632 REMARK 3 S31: 0.1269 S32: 0.0346 S33: -0.0033 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 20 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.2011 6.0798 102.3074 REMARK 3 T TENSOR REMARK 3 T11: 0.1860 T22: 0.2406 REMARK 3 T33: 0.2534 T12: -0.0147 REMARK 3 T13: -0.0479 T23: -0.0332 REMARK 3 L TENSOR REMARK 3 L11: 0.4931 L22: 0.3698 REMARK 3 L33: 1.2856 L12: -0.3324 REMARK 3 L13: -1.2754 L23: 0.3179 REMARK 3 S TENSOR REMARK 3 S11: 0.1043 S12: 0.0696 S13: -0.0200 REMARK 3 S21: -0.0480 S22: -0.1279 S23: -0.0048 REMARK 3 S31: 0.1201 S32: 0.2174 S33: 0.0007 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 43 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.9264 19.5962 95.8493 REMARK 3 T TENSOR REMARK 3 T11: 0.4228 T22: 0.5135 REMARK 3 T33: 0.4279 T12: 0.0836 REMARK 3 T13: -0.0413 T23: 0.1352 REMARK 3 L TENSOR REMARK 3 L11: 0.0552 L22: 0.3928 REMARK 3 L33: 0.1579 L12: -0.1523 REMARK 3 L13: -0.0102 L23: -0.1421 REMARK 3 S TENSOR REMARK 3 S11: 0.0567 S12: 0.4314 S13: -0.4107 REMARK 3 S21: -0.2963 S22: 0.0673 S23: 0.0378 REMARK 3 S31: 0.2148 S32: -0.3948 S33: -0.0017 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 61 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.5104 27.5402 100.9968 REMARK 3 T TENSOR REMARK 3 T11: 0.4073 T22: 0.2321 REMARK 3 T33: 0.3159 T12: 0.0862 REMARK 3 T13: 0.0072 T23: 0.0549 REMARK 3 L TENSOR REMARK 3 L11: 0.8098 L22: 1.0539 REMARK 3 L33: 2.0900 L12: 0.4310 REMARK 3 L13: 0.8808 L23: -0.1977 REMARK 3 S TENSOR REMARK 3 S11: -0.0958 S12: -0.0824 S13: 0.1317 REMARK 3 S21: 0.0267 S22: 0.1745 S23: 0.1084 REMARK 3 S31: -0.5467 S32: -0.1661 S33: 0.0058 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 119 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.5139 9.8863 94.1122 REMARK 3 T TENSOR REMARK 3 T11: 0.3510 T22: 0.3626 REMARK 3 T33: 0.3272 T12: -0.0144 REMARK 3 T13: -0.0290 T23: 0.0203 REMARK 3 L TENSOR REMARK 3 L11: 0.4562 L22: 0.0803 REMARK 3 L33: -0.0371 L12: -1.0434 REMARK 3 L13: -0.1531 L23: -0.3951 REMARK 3 S TENSOR REMARK 3 S11: -0.0975 S12: 0.0443 S13: 0.1249 REMARK 3 S21: -0.2889 S22: 0.0856 S23: 0.1841 REMARK 3 S31: 0.1198 S32: -0.1049 S33: -0.0024 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 140 THROUGH 161 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.2887 6.0901 93.1264 REMARK 3 T TENSOR REMARK 3 T11: 0.2349 T22: 0.4676 REMARK 3 T33: 0.4021 T12: 0.0307 REMARK 3 T13: -0.0052 T23: -0.0540 REMARK 3 L TENSOR REMARK 3 L11: 0.6432 L22: 0.6260 REMARK 3 L33: 0.7335 L12: 0.5605 REMARK 3 L13: 0.0802 L23: 0.0839 REMARK 3 S TENSOR REMARK 3 S11: -0.0916 S12: 0.0873 S13: 0.3647 REMARK 3 S21: -0.3434 S22: 0.2438 S23: -0.3017 REMARK 3 S31: -0.4043 S32: 0.9790 S33: 0.0098 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 162 THROUGH 175 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.2474 -0.3894 85.3920 REMARK 3 T TENSOR REMARK 3 T11: 0.3440 T22: 0.4246 REMARK 3 T33: 0.3418 T12: 0.0661 REMARK 3 T13: -0.0307 T23: -0.0085 REMARK 3 L TENSOR REMARK 3 L11: 0.4120 L22: 0.5817 REMARK 3 L33: 0.7086 L12: 0.0966 REMARK 3 L13: 0.3843 L23: -0.3544 REMARK 3 S TENSOR REMARK 3 S11: 0.5363 S12: 0.4131 S13: -0.0114 REMARK 3 S21: -0.6770 S22: -0.2700 S23: 0.2920 REMARK 3 S31: 0.7547 S32: -0.0729 S33: 0.0205 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 176 THROUGH 208 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.6338 7.2784 98.3490 REMARK 3 T TENSOR REMARK 3 T11: 0.2169 T22: 0.3180 REMARK 3 T33: 0.2289 T12: 0.0162 REMARK 3 T13: -0.0203 T23: -0.0205 REMARK 3 L TENSOR REMARK 3 L11: 1.5205 L22: 1.4914 REMARK 3 L33: 1.4023 L12: -0.2949 REMARK 3 L13: -1.5169 L23: 0.9056 REMARK 3 S TENSOR REMARK 3 S11: 0.0906 S12: -0.2506 S13: 0.2099 REMARK 3 S21: -0.0348 S22: 0.0684 S23: -0.0792 REMARK 3 S31: -0.0707 S32: 0.3810 S33: -0.0003 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 209 THROUGH 226 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.4988 -1.4355 104.7905 REMARK 3 T TENSOR REMARK 3 T11: 0.2943 T22: 0.3976 REMARK 3 T33: 0.3370 T12: 0.0355 REMARK 3 T13: -0.0034 T23: -0.0401 REMARK 3 L TENSOR REMARK 3 L11: 0.7227 L22: 0.2042 REMARK 3 L33: 0.1106 L12: -0.1352 REMARK 3 L13: 0.0605 L23: -0.1825 REMARK 3 S TENSOR REMARK 3 S11: -0.0994 S12: -0.7072 S13: 0.1553 REMARK 3 S21: 0.1212 S22: 0.0330 S23: 0.1538 REMARK 3 S31: 0.2000 S32: -0.0632 S33: 0.0005 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 227 THROUGH 248 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.0806 -9.0896 94.9100 REMARK 3 T TENSOR REMARK 3 T11: 0.2816 T22: 0.2528 REMARK 3 T33: 0.3039 T12: 0.0321 REMARK 3 T13: 0.0226 T23: 0.0151 REMARK 3 L TENSOR REMARK 3 L11: 0.7296 L22: 0.8759 REMARK 3 L33: 0.5468 L12: 0.9891 REMARK 3 L13: 0.3321 L23: 0.2845 REMARK 3 S TENSOR REMARK 3 S11: 0.1597 S12: 0.0555 S13: 0.0903 REMARK 3 S21: 0.0243 S22: -0.2373 S23: -0.1689 REMARK 3 S31: 0.2369 S32: -0.1098 S33: -0.0008 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7DNU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-DEC-20. REMARK 100 THE DEPOSITION ID IS D_1300019821. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-JUL-19 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9785 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13490 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.245 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 15.00 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.29 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 12.20 REMARK 200 R MERGE FOR SHELL (I) : 0.53000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 7DNT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1M IMIDAZOLE, PH 7.0, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 289.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+3/4 REMARK 290 8555 -Y,-X,-Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 110.03850 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 55.01925 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 165.05775 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 110.03850 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 165.05775 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 55.01925 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3640 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 48.43200 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 220.07700 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 453 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 482 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 249 REMARK 465 HIS A 250 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 90 O HOH A 401 2.05 REMARK 500 O HOH A 501 O HOH A 503 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS A 98 O35 IHP A 301 7555 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 6 139.84 -172.79 REMARK 500 ASP A 107 20.39 -153.85 REMARK 500 LEU A 191 84.14 -156.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IHP A 301 DBREF 7DNU A 1 250 UNP P32092 DIPP_ASFB7 1 250 SEQRES 1 A 250 MET ASP THR ALA MET GLN LEU LYS THR SER ILE GLY LEU SEQRES 2 A 250 ILE THR CYS ARG MET ASN THR GLN ASN ASN GLN ILE GLU SEQRES 3 A 250 THR ILE LEU VAL GLN LYS ARG TYR SER LEU ALA PHE SER SEQRES 4 A 250 GLU PHE ILE HIS CYS HIS TYR SER ILE ASN ALA ASN GLN SEQRES 5 A 250 GLY HIS LEU ILE LYS MET PHE ASN ASN MET THR ILE ASN SEQRES 6 A 250 GLU ARG LEU LEU VAL LYS THR LEU ASP PHE ASP ARG MET SEQRES 7 A 250 TRP TYR HIS ILE TRP ILE GLU THR PRO VAL TYR GLU LEU SEQRES 8 A 250 TYR HIS LYS LYS TYR GLN LYS PHE ARG LYS ASN TRP LEU SEQRES 9 A 250 LEU PRO ASP ASN GLY LYS LYS LEU ILE SER LEU ILE ASN SEQRES 10 A 250 GLN ALA LYS GLY SER GLY THR LEU LEU TRP GLU ILE PRO SEQRES 11 A 250 LYS GLY LYS PRO LYS GLU ASP GLU SER ASP LEU THR CYS SEQRES 12 A 250 ALA ILE ARG GLU PHE GLU GLU GLU THR GLY ILE THR ARG SEQRES 13 A 250 GLU TYR TYR GLN ILE LEU PRO GLU PHE LYS LYS SER MET SEQRES 14 A 250 SER TYR PHE ASP GLY LYS THR GLU TYR LYS HIS ILE TYR SEQRES 15 A 250 PHE LEU ALA MET LEU CYS LYS SER LEU GLU GLU PRO ASN SEQRES 16 A 250 MET ASN LEU SER LEU GLN TYR GLU ASN ARG ILE ALA GLU SEQRES 17 A 250 ILE SER LYS ILE SER TRP GLN ASN MET GLU ALA VAL ARG SEQRES 18 A 250 PHE ILE SER LYS ARG GLN SER PHE ASN LEU GLU PRO MET SEQRES 19 A 250 ILE GLY PRO ALA PHE ASN PHE ILE LYS ASN TYR LEU ARG SEQRES 20 A 250 TYR LYS HIS HET IHP A 301 36 HETNAM IHP INOSITOL HEXAKISPHOSPHATE HETSYN IHP MYO-INOSITOL HEXAKISPHOSPHATE; INOSITOL 1,2,3,4,5,6- HETSYN 2 IHP HEXAKISPHOSPHATE FORMUL 2 IHP C6 H18 O24 P6 FORMUL 3 HOH *103(H2 O) HELIX 1 AA1 SER A 35 HIS A 43 1 9 HELIX 2 AA2 ASN A 51 ASN A 61 1 11 HELIX 3 AA3 THR A 63 THR A 72 1 10 HELIX 4 AA4 ASP A 74 ILE A 84 1 11 HELIX 5 AA5 VAL A 88 LEU A 104 1 17 HELIX 6 AA6 GLY A 109 ALA A 119 1 11 HELIX 7 AA7 SER A 139 GLY A 153 1 15 HELIX 8 AA8 THR A 155 GLU A 157 5 3 HELIX 9 AA9 GLU A 193 LEU A 198 5 6 HELIX 10 AB1 TYR A 202 ALA A 207 1 6 HELIX 11 AB2 MET A 217 LYS A 225 1 9 HELIX 12 AB3 LEU A 231 ARG A 247 1 17 SHEET 1 AA1 4 TRP A 127 GLU A 128 0 SHEET 2 AA1 4 GLN A 24 LYS A 32 -1 N VAL A 30 O GLU A 128 SHEET 3 AA1 4 GLN A 6 ASN A 19 -1 N ARG A 17 O GLU A 26 SHEET 4 AA1 4 LYS A 131 GLY A 132 -1 O GLY A 132 N ILE A 11 SHEET 1 AA2 5 ILE A 209 ASN A 216 0 SHEET 2 AA2 5 GLN A 24 LYS A 32 -1 N GLN A 31 O SER A 210 SHEET 3 AA2 5 GLN A 6 ASN A 19 -1 N ARG A 17 O GLU A 26 SHEET 4 AA2 5 THR A 176 LEU A 187 1 O GLU A 177 N LYS A 8 SHEET 5 AA2 5 TYR A 159 ILE A 161 -1 N GLN A 160 O MET A 186 SHEET 1 AA3 3 TYR A 159 ILE A 161 0 SHEET 2 AA3 3 THR A 176 LEU A 187 -1 O MET A 186 N GLN A 160 SHEET 3 AA3 3 LYS A 167 PHE A 172 -1 N LYS A 167 O TYR A 182 SITE 1 AC1 6 GLN A 6 LYS A 8 LYS A 94 LYS A 95 SITE 2 AC1 6 LYS A 98 LYS A 133 CRYST1 48.432 48.432 220.077 90.00 90.00 90.00 P 41 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020648 0.000000 0.000000 0.00000 SCALE2 0.000000 0.020648 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004544 0.00000