HEADER IMMUNE SYSTEM 11-DEC-20 7DO4 TITLE CRYSTAL STRUCTURE OF CD97-CD55 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOFORM 2 OF ADHESION G PROTEIN-COUPLED RECEPTOR E5; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: LEUKOCYTE ANTIGEN CD97; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: COMPLEMENT DECAY-ACCELERATING FACTOR; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 VARIANT: EGF1; SOURCE 6 ORGAN: KIDENY; SOURCE 7 GENE: ADGRE5, CD97; SOURCE 8 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 10 EXPRESSION_SYSTEM_CELL_LINE: HEK293S GNTI-; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 VARIANT: 2; SOURCE 16 GENE: CD55, CR, DAF; SOURCE 17 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 19 EXPRESSION_SYSTEM_CELL_LINE: HEK293S GNTI- KEYWDS LIGAND-RECEPTOR, SIGNALLING, IMMUNE DISORDER, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR M.NIU,G.SONG REVDAT 2 29-NOV-23 7DO4 1 REMARK REVDAT 1 22-SEP-21 7DO4 0 JRNL AUTH M.NIU,S.XU,J.YANG,D.YAO,N.LI,J.YAN,G.ZHONG,G.SONG JRNL TITL STRUCTURAL BASIS FOR CD97 RECOGNITION OF THE JRNL TITL 2 DECAY-ACCELERATING FACTOR CD55 SUGGESTS MECHANOSENSITIVE JRNL TITL 3 ACTIVATION OF ADHESION GPCRS. JRNL REF J.BIOL.CHEM. V. 296 00776 2021 JRNL REFN ESSN 1083-351X JRNL PMID 33992645 JRNL DOI 10.1016/J.JBC.2021.100776 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.23 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 8778 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.271 REMARK 3 R VALUE (WORKING SET) : 0.267 REMARK 3 FREE R VALUE : 0.304 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.050 REMARK 3 FREE R VALUE TEST SET COUNT : 882 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.2200 - 5.8065 0.98 1356 156 0.2212 0.2853 REMARK 3 2 5.8065 - 4.6127 1.00 1330 150 0.2471 0.2813 REMARK 3 3 4.6127 - 4.0308 0.99 1302 144 0.2616 0.2622 REMARK 3 4 4.0308 - 3.6627 0.99 1316 146 0.2943 0.3428 REMARK 3 5 3.6627 - 3.4005 0.99 1303 140 0.3458 0.3627 REMARK 3 6 3.4005 - 3.2002 0.98 1289 146 0.3820 0.4146 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.500 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 37.740 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 80.35 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 80.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 3100 REMARK 3 ANGLE : 0.899 4242 REMARK 3 CHIRALITY : 0.057 458 REMARK 3 PLANARITY : 0.006 561 REMARK 3 DIHEDRAL : 15.871 1888 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 25 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.2128 -24.2772 36.6598 REMARK 3 T TENSOR REMARK 3 T11: 1.0748 T22: 0.6314 REMARK 3 T33: 0.7698 T12: 0.0513 REMARK 3 T13: -0.1679 T23: -0.0070 REMARK 3 L TENSOR REMARK 3 L11: 1.5901 L22: 1.2249 REMARK 3 L33: 2.4893 L12: 0.3353 REMARK 3 L13: 0.5963 L23: 0.5100 REMARK 3 S TENSOR REMARK 3 S11: 0.0933 S12: -0.2121 S13: -0.3074 REMARK 3 S21: 0.0648 S22: 0.0917 S23: -0.0813 REMARK 3 S31: 0.0281 S32: -0.3039 S33: -0.1655 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 34 THROUGH 284 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.0848 -2.7220 62.4133 REMARK 3 T TENSOR REMARK 3 T11: 0.5848 T22: 0.6206 REMARK 3 T33: 0.6088 T12: -0.0088 REMARK 3 T13: 0.0099 T23: -0.0414 REMARK 3 L TENSOR REMARK 3 L11: 0.3945 L22: 0.8065 REMARK 3 L33: 1.9284 L12: 0.2925 REMARK 3 L13: 0.4773 L23: 0.5736 REMARK 3 S TENSOR REMARK 3 S11: -0.0257 S12: 0.0156 S13: -0.0905 REMARK 3 S21: 0.0016 S22: 0.1548 S23: -0.0879 REMARK 3 S31: -0.2869 S32: 0.5455 S33: -0.2293 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7DO4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-DEC-20. REMARK 100 THE DEPOSITION ID IS D_1300018511. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-MAY-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9796 REMARK 200 MONOCHROMATOR : M REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8903 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.190 REMARK 200 RESOLUTION RANGE LOW (A) : 33.230 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.14000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.19 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.27 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.76500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2BOU, 1OJV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES PH 5.9 AND 10% PEG20000, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 22.12500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 21 REMARK 465 ASP A 22 REMARK 465 SER A 23 REMARK 465 ARG A 24 REMARK 465 ASP A 165 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 73 CG CD CE NZ REMARK 470 LYS A 149 CG CD CE NZ REMARK 470 LYS A 159 CG CD CE NZ REMARK 470 ASP B 58 CG OD1 OD2 REMARK 470 GLU B 75 CG CD OE1 OE2 REMARK 470 LYS B 83 CG CD CE NZ REMARK 470 GLN B 86 CG CD OE1 NE2 REMARK 470 ARG B 103 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 156 CG CD OE1 OE2 REMARK 470 ASP B 232 CG OD1 OD2 REMARK 470 ILE B 235 CG1 CG2 CD1 REMARK 470 ARG B 246 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP B 35 OG SER B 85 2.10 REMARK 500 OG SER A 50 O SER A 52 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 196 CA - CB - CG ANGL. DEV. = 14.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 31 -156.97 -77.43 REMARK 500 GLN A 124 55.71 -100.18 REMARK 500 THR A 131 -169.12 -122.37 REMARK 500 THR A 136 -144.71 -120.42 REMARK 500 SER A 139 -151.20 -156.73 REMARK 500 PRO B 40 -177.12 -60.70 REMARK 500 ASP B 58 -0.41 73.38 REMARK 500 SER B 68 -6.81 74.62 REMARK 500 GLU B 99 -156.24 -91.83 REMARK 500 PRO B 141 41.87 -76.31 REMARK 500 ASN B 233 32.69 71.93 REMARK 500 GLU B 262 6.41 -68.50 REMARK 500 HIS B 263 -161.41 61.63 REMARK 500 ASP B 272 -1.08 75.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1103 DISTANCE = 6.99 ANGSTROMS REMARK 525 HOH B 315 DISTANCE = 6.19 ANGSTROMS REMARK 525 HOH B 316 DISTANCE = 6.56 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1001 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 64 OD1 REMARK 620 2 ASP A 64 OD2 49.6 REMARK 620 3 ILE A 65 O 62.8 74.1 REMARK 620 4 GLU A 67 OE1 121.0 136.2 66.9 REMARK 620 5 GLU A 67 OE2 94.5 142.4 79.4 46.8 REMARK 620 6 ASN A 84 OD1 125.6 84.2 79.9 70.3 116.9 REMARK 620 7 THR A 85 O 102.9 68.9 139.1 135.7 141.4 79.8 REMARK 620 8 SER A 88 O 150.5 129.0 145.7 80.9 87.3 78.3 61.1 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1002 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 116 OD1 REMARK 620 2 ASP A 116 OD2 51.4 REMARK 620 3 VAL A 117 O 84.1 58.1 REMARK 620 4 GLU A 119 OE1 136.1 115.2 60.2 REMARK 620 5 GLU A 119 OE2 92.8 110.8 61.8 49.4 REMARK 620 6 ASN A 135 OD1 118.3 68.5 74.5 78.2 123.0 REMARK 620 7 THR A 136 O 79.1 67.8 121.3 140.0 170.5 65.8 REMARK 620 8 SER A 139 O 130.6 161.8 136.3 76.3 87.4 102.1 94.2 REMARK 620 N 1 2 3 4 5 6 7 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS SEQUENCE CORRESPONDS TO THE ISOFORM-2 FOUND IN UNP P08174. DBREF 7DO4 A 21 165 UNP P48960 AGRE5_HUMAN 21 165 DBREF 7DO4 B 35 284 UNP P08174 DAF_HUMAN 35 284 SEQADV 7DO4 SER B 34 UNP P08174 EXPRESSION TAG SEQRES 1 A 145 GLN ASP SER ARG GLY CYS ALA ARG TRP CYS PRO GLN ASN SEQRES 2 A 145 SER SER CYS VAL ASN ALA THR ALA CYS ARG CYS ASN PRO SEQRES 3 A 145 GLY PHE SER SER PHE SER GLU ILE ILE THR THR PRO THR SEQRES 4 A 145 GLU THR CYS ASP ASP ILE ASN GLU CYS ALA THR PRO SER SEQRES 5 A 145 LYS VAL SER CYS GLY LYS PHE SER ASP CYS TRP ASN THR SEQRES 6 A 145 GLU GLY SER TYR ASP CYS VAL CYS SER PRO GLY TYR GLU SEQRES 7 A 145 PRO VAL SER GLY ALA LYS THR PHE LYS ASN GLU SER GLU SEQRES 8 A 145 ASN THR CYS GLN ASP VAL ASP GLU CYS SER SER GLY GLN SEQRES 9 A 145 HIS GLN CYS ASP SER SER THR VAL CYS PHE ASN THR VAL SEQRES 10 A 145 GLY SER TYR SER CYS ARG CYS ARG PRO GLY TRP LYS PRO SEQRES 11 A 145 ARG HIS GLY ILE PRO ASN ASN GLN LYS ASP THR VAL CYS SEQRES 12 A 145 GLU ASP SEQRES 1 B 251 SER ASP CYS GLY LEU PRO PRO ASP VAL PRO ASN ALA GLN SEQRES 2 B 251 PRO ALA LEU GLU GLY ARG THR SER PHE PRO GLU ASP THR SEQRES 3 B 251 VAL ILE THR TYR LYS CYS GLU GLU SER PHE VAL LYS ILE SEQRES 4 B 251 PRO GLY GLU LYS ASP SER VAL ILE CYS LEU LYS GLY SER SEQRES 5 B 251 GLN TRP SER ASP ILE GLU GLU PHE CYS ASN ARG SER CYS SEQRES 6 B 251 GLU VAL PRO THR ARG LEU ASN SER ALA SER LEU LYS GLN SEQRES 7 B 251 PRO TYR ILE THR GLN ASN TYR PHE PRO VAL GLY THR VAL SEQRES 8 B 251 VAL GLU TYR GLU CYS ARG PRO GLY TYR ARG ARG GLU PRO SEQRES 9 B 251 SER LEU SER PRO LYS LEU THR CYS LEU GLN ASN LEU LYS SEQRES 10 B 251 TRP SER THR ALA VAL GLU PHE CYS LYS LYS LYS SER CYS SEQRES 11 B 251 PRO ASN PRO GLY GLU ILE ARG ASN GLY GLN ILE ASP VAL SEQRES 12 B 251 PRO GLY GLY ILE LEU PHE GLY ALA THR ILE SER PHE SER SEQRES 13 B 251 CYS ASN THR GLY TYR LYS LEU PHE GLY SER THR SER SER SEQRES 14 B 251 PHE CYS LEU ILE SER GLY SER SER VAL GLN TRP SER ASP SEQRES 15 B 251 PRO LEU PRO GLU CYS ARG GLU ILE TYR CYS PRO ALA PRO SEQRES 16 B 251 PRO GLN ILE ASP ASN GLY ILE ILE GLN GLY GLU ARG ASP SEQRES 17 B 251 HIS TYR GLY TYR ARG GLN SER VAL THR TYR ALA CYS ASN SEQRES 18 B 251 LYS GLY PHE THR MET ILE GLY GLU HIS SER ILE TYR CYS SEQRES 19 B 251 THR VAL ASN ASN ASP GLU GLY GLU TRP SER GLY PRO PRO SEQRES 20 B 251 PRO GLU CYS ARG HET NAG C 1 14 HET NAG C 2 14 HET CA A1001 1 HET CA A1002 1 HET NAG A1003 14 HET NAG A1004 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CA CALCIUM ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 NAG 4(C8 H15 N O6) FORMUL 4 CA 2(CA 2+) FORMUL 8 HOH *19(H2 O) HELIX 1 AA1 ASN A 108 ASN A 112 5 5 HELIX 2 AA2 GLN B 111 THR B 115 5 5 SHEET 1 AA1 2 SER A 34 ASN A 38 0 SHEET 2 AA1 2 ALA A 41 CYS A 44 -1 O ARG A 43 N SER A 35 SHEET 1 AA2 2 PHE A 48 SER A 49 0 SHEET 2 AA2 2 ASP A 63 ASP A 64 -1 O ASP A 63 N SER A 49 SHEET 1 AA3 2 SER A 80 THR A 85 0 SHEET 2 AA3 2 SER A 88 CYS A 93 -1 O VAL A 92 N ASP A 81 SHEET 1 AA4 2 TYR A 97 PRO A 99 0 SHEET 2 AA4 2 CYS A 114 ASP A 116 -1 O GLN A 115 N GLU A 98 SHEET 1 AA5 2 THR A 131 ASN A 135 0 SHEET 2 AA5 2 TYR A 140 CYS A 144 -1 O SER A 141 N PHE A 134 SHEET 1 AA6 2 LYS A 149 PRO A 150 0 SHEET 2 AA6 2 CYS A 163 GLU A 164 -1 O GLU A 164 N LYS A 149 SHEET 1 AA7 4 GLN B 46 PRO B 47 0 SHEET 2 AA7 4 VAL B 60 LYS B 64 -1 O LYS B 64 N GLN B 46 SHEET 3 AA7 4 SER B 78 LEU B 82 -1 O VAL B 79 N ILE B 61 SHEET 4 AA7 4 GLN B 86 TRP B 87 -1 O GLN B 86 N LEU B 82 SHEET 1 AA8 2 PHE B 69 LYS B 71 0 SHEET 2 AA8 2 CYS B 94 ARG B 96 -1 O ASN B 95 N VAL B 70 SHEET 1 AA9 3 ALA B 107 LEU B 109 0 SHEET 2 AA9 3 VAL B 124 CYS B 129 -1 O GLU B 128 N SER B 108 SHEET 3 AA9 3 LYS B 142 THR B 144 -1 O LEU B 143 N VAL B 125 SHEET 1 AB1 2 TYR B 133 ARG B 135 0 SHEET 2 AB1 2 CYS B 158 LYS B 160 -1 O LYS B 159 N ARG B 134 SHEET 1 AB2 4 GLY B 172 ASP B 175 0 SHEET 2 AB2 4 THR B 185 CYS B 190 -1 O SER B 189 N GLN B 173 SHEET 3 AB2 4 SER B 201 SER B 207 -1 O SER B 202 N ILE B 186 SHEET 4 AB2 4 SER B 210 TRP B 213 -1 O SER B 210 N SER B 207 SHEET 1 AB3 2 TYR B 194 PHE B 197 0 SHEET 2 AB3 2 GLU B 219 GLU B 222 -1 O ARG B 221 N LYS B 195 SHEET 1 AB4 2 GLY B 234 ILE B 236 0 SHEET 2 AB4 2 TYR B 251 CYS B 253 -1 O ALA B 252 N ILE B 235 SHEET 1 AB5 3 SER B 248 VAL B 249 0 SHEET 2 AB5 3 ILE B 265 ASN B 270 -1 O ILE B 265 N VAL B 249 SHEET 3 AB5 3 GLU B 273 TRP B 276 -1 O GLU B 275 N THR B 268 SSBOND 1 CYS A 26 CYS A 36 1555 1555 2.04 SSBOND 2 CYS A 30 CYS A 42 1555 1555 2.04 SSBOND 3 CYS A 44 CYS A 62 1555 1555 2.04 SSBOND 4 CYS A 68 CYS A 82 1555 1555 2.04 SSBOND 5 CYS A 76 CYS A 91 1555 1555 2.04 SSBOND 6 CYS A 93 CYS A 114 1555 1555 2.03 SSBOND 7 CYS A 120 CYS A 133 1555 1555 2.03 SSBOND 8 CYS A 127 CYS A 142 1555 1555 2.04 SSBOND 9 CYS A 144 CYS A 163 1555 1555 2.03 SSBOND 10 CYS B 36 CYS B 81 1555 1555 2.02 SSBOND 11 CYS B 65 CYS B 94 1555 1555 2.04 SSBOND 12 CYS B 98 CYS B 145 1555 1555 2.03 SSBOND 13 CYS B 129 CYS B 158 1555 1555 2.04 SSBOND 14 CYS B 163 CYS B 204 1555 1555 2.03 SSBOND 15 CYS B 190 CYS B 220 1555 1555 2.03 SSBOND 16 CYS B 225 CYS B 267 1555 1555 2.03 SSBOND 17 CYS B 253 CYS B 283 1555 1555 2.04 LINK ND2 ASN A 38 C1 NAG A1003 1555 1555 1.46 LINK ND2 ASN A 108 C1 NAG A1004 1555 1555 1.45 LINK ND2 ASN B 95 C1 NAG C 1 1555 1555 1.45 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK OD1 ASP A 64 CA CA A1001 1555 1555 2.48 LINK OD2 ASP A 64 CA CA A1001 1555 1555 2.74 LINK O ILE A 65 CA CA A1001 1555 1555 2.85 LINK OE1 GLU A 67 CA CA A1001 1555 1555 2.41 LINK OE2 GLU A 67 CA CA A1001 1555 1555 2.96 LINK OD1 ASN A 84 CA CA A1001 1555 1555 2.49 LINK O THR A 85 CA CA A1001 1555 1555 2.27 LINK O SER A 88 CA CA A1001 1555 1555 3.07 LINK OD1 ASP A 116 CA CA A1002 1555 1555 2.51 LINK OD2 ASP A 116 CA CA A1002 1555 1555 2.56 LINK O VAL A 117 CA CA A1002 1555 1555 2.92 LINK OE1 GLU A 119 CA CA A1002 1555 1555 2.50 LINK OE2 GLU A 119 CA CA A1002 1555 1555 2.72 LINK OD1 ASN A 135 CA CA A1002 1555 1555 2.48 LINK O THR A 136 CA CA A1002 1555 1555 2.65 LINK O SER A 139 CA CA A1002 1555 1555 2.60 CISPEP 1 THR A 70 PRO A 71 0 -3.89 CRYST1 51.800 44.250 116.530 90.00 98.70 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019305 0.000000 0.002954 0.00000 SCALE2 0.000000 0.022599 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008681 0.00000