HEADER BIOSYNTHETIC PROTEIN 30-DEC-20 7DRZ TITLE CRYSTAL STRUCTURE OF ASPERGILLUS ORYZAE RIB2 DEAMINASE (C-TERMINAL TITLE 2 DELETION MUTANT) AT PH 4.6 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CMP/DCMP-TYPE DEAMINASE DOMAIN-CONTAINING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: C-TERMINAL DELETION MUTANT SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS ORYZAE RIB40; SOURCE 3 ORGANISM_COMMON: YELLOW KOJI MOLD; SOURCE 4 ORGANISM_TAXID: 510516; SOURCE 5 STRAIN: RIB40; SOURCE 6 GENE: AO090026000280; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DEAMINASE, RIBOFLAVIN, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.C.CHEN,S.H.LIAW,C.H.HSU REVDAT 2 27-MAR-24 7DRZ 1 REMARK REVDAT 1 14-JUL-21 7DRZ 0 JRNL AUTH S.C.CHEN,L.C.YE,T.M.YEN,R.X.ZHU,C.Y.LI,S.C.CHANG,S.H.LIAW, JRNL AUTH 2 C.H.HSU JRNL TITL CRYSTAL STRUCTURES OF ASPERGILLUS ORYZAE RIB2 DEAMINASE: THE JRNL TITL 2 FUNCTIONAL MECHANISM INVOLVED IN RIBOFLAVIN BIOSYNTHESIS. JRNL REF IUCRJ V. 8 549 2021 JRNL REFN ESSN 2052-2525 JRNL DOI 10.1107/S205225252100275X REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.12 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 26317 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.910 REMARK 3 FREE R VALUE TEST SET COUNT : 1292 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 25.1200 - 3.5300 1.00 2964 164 0.1901 0.2186 REMARK 3 2 3.5300 - 2.8100 1.00 2825 143 0.2020 0.2249 REMARK 3 3 2.8100 - 2.4500 1.00 2804 146 0.2011 0.1885 REMARK 3 4 2.4500 - 2.2300 1.00 2776 148 0.1881 0.1844 REMARK 3 5 2.2300 - 2.0700 1.00 2799 115 0.1850 0.2071 REMARK 3 6 2.0700 - 1.9500 1.00 2743 137 0.1784 0.1754 REMARK 3 7 1.9500 - 1.8500 1.00 2725 159 0.2025 0.2244 REMARK 3 8 1.8500 - 1.7700 1.00 2718 157 0.2116 0.2318 REMARK 3 9 1.7700 - 1.7000 0.97 2671 123 0.2250 0.2615 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.930 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 28 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.2058 21.9954 3.3730 REMARK 3 T TENSOR REMARK 3 T11: 0.0659 T22: 0.1002 REMARK 3 T33: 0.1102 T12: -0.0191 REMARK 3 T13: 0.0039 T23: -0.0217 REMARK 3 L TENSOR REMARK 3 L11: 0.1331 L22: 0.0726 REMARK 3 L33: 0.2462 L12: 0.0310 REMARK 3 L13: 0.0135 L23: -0.0438 REMARK 3 S TENSOR REMARK 3 S11: -0.0369 S12: 0.0457 S13: -0.0567 REMARK 3 S21: -0.0884 S22: -0.0496 S23: -0.1746 REMARK 3 S31: 0.0085 S32: 0.1702 S33: -0.1313 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 29 THROUGH 45 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.9640 9.1784 7.4135 REMARK 3 T TENSOR REMARK 3 T11: 0.0731 T22: -0.0357 REMARK 3 T33: 0.2048 T12: -0.0547 REMARK 3 T13: 0.0521 T23: 0.0164 REMARK 3 L TENSOR REMARK 3 L11: 0.0001 L22: 0.0785 REMARK 3 L33: 0.0388 L12: 0.0570 REMARK 3 L13: 0.0093 L23: -0.0142 REMARK 3 S TENSOR REMARK 3 S11: -0.0794 S12: 0.0724 S13: -0.2272 REMARK 3 S21: 0.0674 S22: 0.1899 S23: 0.1062 REMARK 3 S31: 0.1062 S32: 0.1620 S33: 0.1335 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 46 THROUGH 73 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.5984 28.0085 4.7223 REMARK 3 T TENSOR REMARK 3 T11: 0.0634 T22: 0.0539 REMARK 3 T33: 0.0797 T12: -0.0137 REMARK 3 T13: 0.0078 T23: -0.0095 REMARK 3 L TENSOR REMARK 3 L11: 0.1564 L22: 0.1250 REMARK 3 L33: 0.1871 L12: -0.1492 REMARK 3 L13: 0.0461 L23: -0.1412 REMARK 3 S TENSOR REMARK 3 S11: 0.0137 S12: -0.0539 S13: 0.0172 REMARK 3 S21: 0.1326 S22: 0.0184 S23: -0.0392 REMARK 3 S31: -0.0307 S32: -0.0014 S33: 0.0427 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 74 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.1244 31.0050 10.1660 REMARK 3 T TENSOR REMARK 3 T11: 0.1518 T22: 0.1203 REMARK 3 T33: 0.1411 T12: 0.0448 REMARK 3 T13: 0.0422 T23: -0.0088 REMARK 3 L TENSOR REMARK 3 L11: 0.0363 L22: 0.0559 REMARK 3 L33: 0.0525 L12: 0.0067 REMARK 3 L13: 0.0095 L23: -0.0331 REMARK 3 S TENSOR REMARK 3 S11: -0.1298 S12: -0.0739 S13: 0.1342 REMARK 3 S21: 0.1980 S22: 0.0713 S23: 0.2065 REMARK 3 S31: -0.1393 S32: -0.1357 S33: -0.0055 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 84 THROUGH 97 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.4130 15.9659 10.7165 REMARK 3 T TENSOR REMARK 3 T11: 0.0846 T22: 0.0913 REMARK 3 T33: 0.1941 T12: -0.0168 REMARK 3 T13: 0.0446 T23: 0.0601 REMARK 3 L TENSOR REMARK 3 L11: 0.1262 L22: 0.0872 REMARK 3 L33: 0.2542 L12: 0.0659 REMARK 3 L13: 0.0620 L23: 0.1473 REMARK 3 S TENSOR REMARK 3 S11: 0.0129 S12: -0.0961 S13: -0.2090 REMARK 3 S21: 0.0600 S22: 0.1042 S23: 0.1640 REMARK 3 S31: 0.0989 S32: -0.0341 S33: 0.1092 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 98 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.2355 30.9072 16.1516 REMARK 3 T TENSOR REMARK 3 T11: 0.2101 T22: 0.1467 REMARK 3 T33: 0.1123 T12: -0.0289 REMARK 3 T13: -0.0105 T23: -0.0591 REMARK 3 L TENSOR REMARK 3 L11: 0.0110 L22: 0.0618 REMARK 3 L33: 0.0331 L12: 0.0143 REMARK 3 L13: -0.0005 L23: 0.0530 REMARK 3 S TENSOR REMARK 3 S11: 0.0428 S12: -0.1870 S13: 0.1206 REMARK 3 S21: 0.1328 S22: -0.0365 S23: -0.0859 REMARK 3 S31: -0.3099 S32: 0.2064 S33: 0.0077 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 112 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.2026 23.1353 16.9148 REMARK 3 T TENSOR REMARK 3 T11: 0.1614 T22: 0.1626 REMARK 3 T33: 0.0928 T12: -0.0027 REMARK 3 T13: 0.0295 T23: -0.0122 REMARK 3 L TENSOR REMARK 3 L11: 0.4600 L22: 0.6969 REMARK 3 L33: 0.1877 L12: -0.1303 REMARK 3 L13: -0.0092 L23: -0.0109 REMARK 3 S TENSOR REMARK 3 S11: -0.1095 S12: -0.4278 S13: -0.1141 REMARK 3 S21: 0.4893 S22: 0.1451 S23: -0.0005 REMARK 3 S31: -0.0564 S32: 0.0482 S33: 0.0279 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 145 THROUGH 163 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.9487 17.8467 20.1006 REMARK 3 T TENSOR REMARK 3 T11: 0.2825 T22: 0.2379 REMARK 3 T33: 0.0295 T12: 0.0576 REMARK 3 T13: 0.0284 T23: 0.0219 REMARK 3 L TENSOR REMARK 3 L11: 0.4000 L22: 0.6537 REMARK 3 L33: 0.3449 L12: 0.4056 REMARK 3 L13: -0.0356 L23: 0.0619 REMARK 3 S TENSOR REMARK 3 S11: 0.0097 S12: -0.3014 S13: -0.2382 REMARK 3 S21: 0.5275 S22: 0.0936 S23: -0.3843 REMARK 3 S31: -0.0365 S32: -0.0316 S33: 0.0981 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 164 THROUGH 177 ) REMARK 3 ORIGIN FOR THE GROUP (A): 54.4106 24.6852 6.4463 REMARK 3 T TENSOR REMARK 3 T11: 0.0565 T22: 0.1845 REMARK 3 T33: 0.1091 T12: -0.0569 REMARK 3 T13: -0.0170 T23: -0.0388 REMARK 3 L TENSOR REMARK 3 L11: 0.2131 L22: 0.0903 REMARK 3 L33: 0.1689 L12: -0.0001 REMARK 3 L13: -0.0405 L23: -0.0699 REMARK 3 S TENSOR REMARK 3 S11: 0.0112 S12: -0.0172 S13: -0.0616 REMARK 3 S21: 0.0751 S22: -0.1747 S23: -0.2419 REMARK 3 S31: 0.0402 S32: 0.4096 S33: -0.0573 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 178 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): 59.1724 23.7522 11.6788 REMARK 3 T TENSOR REMARK 3 T11: 0.0079 T22: 0.1787 REMARK 3 T33: -0.0560 T12: -0.2576 REMARK 3 T13: -0.2912 T23: -0.1385 REMARK 3 L TENSOR REMARK 3 L11: 0.2405 L22: 0.0967 REMARK 3 L33: 0.0212 L12: -0.0155 REMARK 3 L13: 0.0618 L23: 0.0058 REMARK 3 S TENSOR REMARK 3 S11: 0.1578 S12: 0.0813 S13: 0.0523 REMARK 3 S21: 0.1388 S22: -0.0383 S23: -0.2741 REMARK 3 S31: -0.0592 S32: 0.0862 S33: 0.0540 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7DRZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-JAN-21. REMARK 100 THE DEPOSITION ID IS D_1300019805. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUL-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL15A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9762 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26416 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 11.30 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.78000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2 M SODIUM CHLORIDE AND 0.1 M SODIUM REMARK 280 ACETATE PH 4.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 288K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 30.60750 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 43.54650 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 43.54650 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 15.30375 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 43.54650 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 43.54650 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 45.91125 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 43.54650 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.54650 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 15.30375 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 43.54650 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.54650 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 45.91125 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 30.60750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 528 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLN A 2 REMARK 465 LEU A 189 REMARK 465 GLU A 190 REMARK 465 HIS A 191 REMARK 465 HIS A 192 REMARK 465 HIS A 193 REMARK 465 HIS A 194 REMARK 465 HIS A 195 REMARK 465 HIS A 196 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 177 46.52 -107.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 300 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 61 ND1 REMARK 620 2 CYS A 102 SG 108.6 REMARK 620 3 CYS A 112 SG 110.2 114.0 REMARK 620 N 1 2 DBREF 7DRZ A 1 188 UNP Q2UFA9 Q2UFA9_ASPOR 1 188 SEQADV 7DRZ LEU A 189 UNP Q2UFA9 EXPRESSION TAG SEQADV 7DRZ GLU A 190 UNP Q2UFA9 EXPRESSION TAG SEQADV 7DRZ HIS A 191 UNP Q2UFA9 EXPRESSION TAG SEQADV 7DRZ HIS A 192 UNP Q2UFA9 EXPRESSION TAG SEQADV 7DRZ HIS A 193 UNP Q2UFA9 EXPRESSION TAG SEQADV 7DRZ HIS A 194 UNP Q2UFA9 EXPRESSION TAG SEQADV 7DRZ HIS A 195 UNP Q2UFA9 EXPRESSION TAG SEQADV 7DRZ HIS A 196 UNP Q2UFA9 EXPRESSION TAG SEQRES 1 A 196 MET GLN SER PRO HIS ALA LYS TYR LEU ARG GLU CYS LEU SEQRES 2 A 196 SER LEU ALA GLU LYS SER PRO PRO ARG PRO THR ASN PHE SEQRES 3 A 196 ARG VAL GLY ALA ILE LEU VAL SER ARG LYS GLU GLY ASP SEQRES 4 A 196 TYR LYS THR GLU ASP ASP ARG ILE VAL SER THR GLY TYR SEQRES 5 A 196 THR MET GLU LEU ALA GLY ASN THR HIS ALA GLU GLN CYS SEQRES 6 A 196 CYS LEU SER ASN TYR ALA ALA VAL HIS SER VAL PRO GLU SEQRES 7 A 196 ASP ARG VAL TRP GLU VAL LEU PRO SER GLU PRO ASP ARG SEQRES 8 A 196 LYS LEU VAL MET TYR VAL THR MET GLU PRO CYS GLY LYS SEQRES 9 A 196 ARG LEU SER GLY ASN LEU PRO CYS VAL GLN ARG ILE ILE SEQRES 10 A 196 ARG THR ARG GLN GLY ASP ARG LYS GLY ILE GLN LYS ILE SEQRES 11 A 196 TYR PHE GLY VAL LYS GLU PRO GLY THR PHE VAL GLY GLY SEQRES 12 A 196 SER GLU GLY CYS GLN MET LEU THR ALA ALA GLY ILE ASP SEQRES 13 A 196 TRP GLN VAL VAL ASN GLY LEU GLU ARG GLU ILE LEU GLU SEQRES 14 A 196 VAL ALA VAL ALA GLY HIS GLU ASN ARG GLU GLU GLU VAL SEQRES 15 A 196 LYS ALA ALA LEU ASP THR LEU GLU HIS HIS HIS HIS HIS SEQRES 16 A 196 HIS HET ZN A 300 1 HETNAM ZN ZINC ION FORMUL 2 ZN ZN 2+ FORMUL 3 HOH *128(H2 O) HELIX 1 AA1 PRO A 4 GLU A 17 1 14 HELIX 2 AA2 LYS A 41 ASP A 45 5 5 HELIX 3 AA3 HIS A 61 HIS A 74 1 14 HELIX 4 AA4 PRO A 77 VAL A 84 5 8 HELIX 5 AA5 PRO A 111 ARG A 118 1 8 HELIX 6 AA6 SER A 144 ALA A 153 1 10 HELIX 7 AA7 LEU A 163 VAL A 172 1 10 HELIX 8 AA8 ASN A 177 THR A 188 1 12 SHEET 1 AA1 5 ARG A 46 TYR A 52 0 SHEET 2 AA1 5 GLY A 29 LYS A 36 -1 N LEU A 32 O VAL A 48 SHEET 3 AA1 5 ARG A 91 GLU A 100 -1 O VAL A 94 N VAL A 33 SHEET 4 AA1 5 ILE A 127 PRO A 137 1 O TYR A 131 N MET A 95 SHEET 5 AA1 5 ASP A 156 VAL A 159 1 O GLN A 158 N ILE A 130 LINK ND1 HIS A 61 ZN ZN A 300 1555 1555 2.00 LINK SG CYS A 102 ZN ZN A 300 1555 1555 2.32 LINK SG CYS A 112 ZN ZN A 300 1555 1555 2.28 CRYST1 87.093 87.093 61.215 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011482 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011482 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016336 0.00000