data_7DVV # _entry.id 7DVV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7DVV pdb_00007dvv 10.2210/pdb7dvv/pdb WWPDB D_1300020262 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB 'the same protein complexed with heme' 7DVR unspecified PDB 'the same protein complexed with heme and carbon monoxide' 7DVT unspecified PDB 'the same protein complexed with heme and cyanide' 7DVU unspecified PDB 'the same protein in ligand free' 7DVS unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7DVV _pdbx_database_status.recvd_initial_deposition_date 2021-01-15 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Nishinaga, M.' 1 ? 'Nagai, S.' 2 ? 'Nishitani, Y.' 3 ? 'Sugimoto, H.' 4 0000-0002-3140-8362 'Shiro, Y.' 5 0000-0003-0695-8327 'Sawai, H.' 6 0000-0002-0714-8337 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Commun Biol' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2399-3642 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 4 _citation.language ? _citation.page_first 467 _citation.page_last 467 _citation.title 'Heme controls the structural rearrangement of its sensor protein mediating the hemolytic bacterial survival.' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s42003-021-01987-5 _citation.pdbx_database_id_PubMed 33850260 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nishinaga, M.' 1 ? primary 'Sugimoto, H.' 2 0000-0002-3140-8362 primary 'Nishitani, Y.' 3 0000-0002-0818-1999 primary 'Nagai, S.' 4 ? primary 'Nagatoishi, S.' 5 0000-0002-0794-3963 primary 'Muraki, N.' 6 ? primary 'Tosha, T.' 7 0000-0002-8971-0759 primary 'Tsumoto, K.' 8 ? primary 'Aono, S.' 9 0000-0002-2870-3694 primary 'Shiro, Y.' 10 0000-0003-0695-8327 primary 'Sawai, H.' 11 0000-0002-0714-8337 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 7DVV _cell.details ? _cell.formula_units_Z ? _cell.length_a 100.973 _cell.length_a_esd ? _cell.length_b 100.973 _cell.length_b_esd ? _cell.length_c 128.989 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7DVV _symmetry.cell_setting ? _symmetry.Int_Tables_number 153 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 1 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'HTH marR-type domain-containing protein' 17817.852 2 ? ? 'heme sensor protein' ? 2 polymer syn 'DNA (28-MER)' 8579.605 1 ? ? ? ? 3 polymer syn 'DNA (28-MER)' 8623.598 1 ? ? ? ? 4 water nat water 18.015 9 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MENPLQKARILVNQLEKYLDRYAKEYDVEHLAGPQGHLVMHLYKHPDKDMSIKDAEEILHISKSVASNLVKRMEKNGFIA IVPSKTDKRVKYLYLTHLGKQKATQFEIFLEKLHSTMLAGITKEEIRTTKKVIRTLAKNMAMEDFDSLEVLFQ ; ;MENPLQKARILVNQLEKYLDRYAKEYDVEHLAGPQGHLVMHLYKHPDKDMSIKDAEEILHISKSVASNLVKRMEKNGFIA IVPSKTDKRVKYLYLTHLGKQKATQFEIFLEKLHSTMLAGITKEEIRTTKKVIRTLAKNMAMEDFDSLEVLFQ ; A,B ? 2 polydeoxyribonucleotide no no ;(DT)(DA)(DA)(DA)(DA)(DT)(DA)(DG)(DT)(DT)(DC)(DT)(DC)(DA)(DC)(DG)(DA)(DT)(DA)(DA) (DC)(DT)(DA)(DT)(DT)(DA)(DA)(DA) ; TAAAATAGTTCTCACGATAACTATTAAA L ? 3 polydeoxyribonucleotide no no ;(DT)(DT)(DT)(DA)(DA)(DT)(DA)(DG)(DT)(DT)(DA)(DT)(DC)(DG)(DT)(DG)(DA)(DG)(DA)(DA) (DC)(DT)(DA)(DT)(DT)(DT)(DT)(DA) ; TTTAATAGTTATCGTGAGAACTATTTTA M ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 ASN n 1 4 PRO n 1 5 LEU n 1 6 GLN n 1 7 LYS n 1 8 ALA n 1 9 ARG n 1 10 ILE n 1 11 LEU n 1 12 VAL n 1 13 ASN n 1 14 GLN n 1 15 LEU n 1 16 GLU n 1 17 LYS n 1 18 TYR n 1 19 LEU n 1 20 ASP n 1 21 ARG n 1 22 TYR n 1 23 ALA n 1 24 LYS n 1 25 GLU n 1 26 TYR n 1 27 ASP n 1 28 VAL n 1 29 GLU n 1 30 HIS n 1 31 LEU n 1 32 ALA n 1 33 GLY n 1 34 PRO n 1 35 GLN n 1 36 GLY n 1 37 HIS n 1 38 LEU n 1 39 VAL n 1 40 MET n 1 41 HIS n 1 42 LEU n 1 43 TYR n 1 44 LYS n 1 45 HIS n 1 46 PRO n 1 47 ASP n 1 48 LYS n 1 49 ASP n 1 50 MET n 1 51 SER n 1 52 ILE n 1 53 LYS n 1 54 ASP n 1 55 ALA n 1 56 GLU n 1 57 GLU n 1 58 ILE n 1 59 LEU n 1 60 HIS n 1 61 ILE n 1 62 SER n 1 63 LYS n 1 64 SER n 1 65 VAL n 1 66 ALA n 1 67 SER n 1 68 ASN n 1 69 LEU n 1 70 VAL n 1 71 LYS n 1 72 ARG n 1 73 MET n 1 74 GLU n 1 75 LYS n 1 76 ASN n 1 77 GLY n 1 78 PHE n 1 79 ILE n 1 80 ALA n 1 81 ILE n 1 82 VAL n 1 83 PRO n 1 84 SER n 1 85 LYS n 1 86 THR n 1 87 ASP n 1 88 LYS n 1 89 ARG n 1 90 VAL n 1 91 LYS n 1 92 TYR n 1 93 LEU n 1 94 TYR n 1 95 LEU n 1 96 THR n 1 97 HIS n 1 98 LEU n 1 99 GLY n 1 100 LYS n 1 101 GLN n 1 102 LYS n 1 103 ALA n 1 104 THR n 1 105 GLN n 1 106 PHE n 1 107 GLU n 1 108 ILE n 1 109 PHE n 1 110 LEU n 1 111 GLU n 1 112 LYS n 1 113 LEU n 1 114 HIS n 1 115 SER n 1 116 THR n 1 117 MET n 1 118 LEU n 1 119 ALA n 1 120 GLY n 1 121 ILE n 1 122 THR n 1 123 LYS n 1 124 GLU n 1 125 GLU n 1 126 ILE n 1 127 ARG n 1 128 THR n 1 129 THR n 1 130 LYS n 1 131 LYS n 1 132 VAL n 1 133 ILE n 1 134 ARG n 1 135 THR n 1 136 LEU n 1 137 ALA n 1 138 LYS n 1 139 ASN n 1 140 MET n 1 141 ALA n 1 142 MET n 1 143 GLU n 1 144 ASP n 1 145 PHE n 1 146 ASP n 1 147 SER n 1 148 LEU n 1 149 GLU n 1 150 VAL n 1 151 LEU n 1 152 PHE n 1 153 GLN n 2 1 DT n 2 2 DA n 2 3 DA n 2 4 DA n 2 5 DA n 2 6 DT n 2 7 DA n 2 8 DG n 2 9 DT n 2 10 DT n 2 11 DC n 2 12 DT n 2 13 DC n 2 14 DA n 2 15 DC n 2 16 DG n 2 17 DA n 2 18 DT n 2 19 DA n 2 20 DA n 2 21 DC n 2 22 DT n 2 23 DA n 2 24 DT n 2 25 DT n 2 26 DA n 2 27 DA n 2 28 DA n 3 1 DT n 3 2 DT n 3 3 DT n 3 4 DA n 3 5 DA n 3 6 DT n 3 7 DA n 3 8 DG n 3 9 DT n 3 10 DT n 3 11 DA n 3 12 DT n 3 13 DC n 3 14 DG n 3 15 DT n 3 16 DG n 3 17 DA n 3 18 DG n 3 19 DA n 3 20 DA n 3 21 DC n 3 22 DT n 3 23 DA n 3 24 DT n 3 25 DT n 3 26 DT n 3 27 DT n 3 28 DA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 153 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene gbs1402 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain NEM316 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptococcus agalactiae serotype III (strain NEM316)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 211110 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-22b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 28 'Streptococcus agalactiae NEM316' ? 211110 ? 3 1 sample 1 28 'Streptococcus agalactiae NEM316' ? 211110 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP Q8E4J9_STRA3 Q8E4J9 ? 1 ;MENPLQKARILVNQLEKYLDRYAKEYDVEHLAGPQGHLVMHLYKHPDKDMSIKDAEEILHISKSVASNLVKRMEKNGFIA IVPSKTDKRVKYLYLTHLGKQKATQFEIFLEKLHSTMLAGITKEEIRTTKKVIRTLAKNMAMEDFD ; 1 2 PDB 7DVV 7DVV ? 2 ? 1 3 PDB 7DVV 7DVV ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7DVV A 1 ? 146 ? Q8E4J9 1 ? 146 ? 1 146 2 1 7DVV B 1 ? 146 ? Q8E4J9 1 ? 146 ? 1 146 3 2 7DVV L 1 ? 28 ? 7DVV 1 ? 28 ? 1 28 4 3 7DVV M 1 ? 28 ? 7DVV 1 ? 28 ? 1 28 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7DVV SER A 147 ? UNP Q8E4J9 ? ? 'expression tag' 147 1 1 7DVV LEU A 148 ? UNP Q8E4J9 ? ? 'expression tag' 148 2 1 7DVV GLU A 149 ? UNP Q8E4J9 ? ? 'expression tag' 149 3 1 7DVV VAL A 150 ? UNP Q8E4J9 ? ? 'expression tag' 150 4 1 7DVV LEU A 151 ? UNP Q8E4J9 ? ? 'expression tag' 151 5 1 7DVV PHE A 152 ? UNP Q8E4J9 ? ? 'expression tag' 152 6 1 7DVV GLN A 153 ? UNP Q8E4J9 ? ? 'expression tag' 153 7 2 7DVV SER B 147 ? UNP Q8E4J9 ? ? 'expression tag' 147 8 2 7DVV LEU B 148 ? UNP Q8E4J9 ? ? 'expression tag' 148 9 2 7DVV GLU B 149 ? UNP Q8E4J9 ? ? 'expression tag' 149 10 2 7DVV VAL B 150 ? UNP Q8E4J9 ? ? 'expression tag' 150 11 2 7DVV LEU B 151 ? UNP Q8E4J9 ? ? 'expression tag' 151 12 2 7DVV PHE B 152 ? UNP Q8E4J9 ? ? 'expression tag' 152 13 2 7DVV GLN B 153 ? UNP Q8E4J9 ? ? 'expression tag' 153 14 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7DVV _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.59 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 65.76 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '25%(w/v) PEGMME 2000, 0.2 M lithium sulfate, 0.1 M MES' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details mirrors _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-01-22 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SPRING-8 BEAMLINE BL41XU' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.00 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL41XU _diffrn_source.pdbx_synchrotron_site SPring-8 # _reflns.B_iso_Wilson_estimate 75.503 _reflns.entry_id 7DVV _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.490 _reflns.d_resolution_low 47.060 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 26423 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.900 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.992 _reflns.pdbx_Rmerge_I_obs 0.083 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 14.630 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.321 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.089 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 357952 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split 2.490 2.650 ? 1.000 ? 57980 8270 ? 8222 99.400 ? ? ? ? 1.769 ? ? ? ? ? ? ? ? 7.052 ? ? ? ? 1.911 ? ? 1 1 0.562 ? ? 2.650 2.830 ? 2.110 ? 53162 7759 ? 7759 100.000 ? ? ? ? 0.828 ? ? ? ? ? ? ? ? 6.852 ? ? ? ? 0.896 ? ? 2 1 0.855 ? ? 2.830 3.050 ? 3.470 ? 50387 7260 ? 7260 100.000 ? ? ? ? 0.512 ? ? ? ? ? ? ? ? 6.940 ? ? ? ? 0.554 ? ? 3 1 0.927 ? ? 3.050 3.340 ? 10.350 ? 48581 6649 ? 6649 100.000 ? ? ? ? 0.161 ? ? ? ? ? ? ? ? 7.307 ? ? ? ? 0.173 ? ? 4 1 0.996 ? ? 3.340 3.740 ? 17.070 ? 42470 6012 ? 6011 100.000 ? ? ? ? 0.103 ? ? ? ? ? ? ? ? 7.065 ? ? ? ? 0.111 ? ? 5 1 0.997 ? ? 3.740 4.310 ? 25.130 ? 35901 5315 ? 5315 100.000 ? ? ? ? 0.069 ? ? ? ? ? ? ? ? 6.755 ? ? ? ? 0.074 ? ? 6 1 0.998 ? ? 4.310 5.270 ? 33.190 ? 31448 4501 ? 4501 100.000 ? ? ? ? 0.054 ? ? ? ? ? ? ? ? 6.987 ? ? ? ? 0.058 ? ? 7 1 0.998 ? ? 5.270 7.400 ? 37.890 ? 24053 3504 ? 3504 100.000 ? ? ? ? 0.047 ? ? ? ? ? ? ? ? 6.864 ? ? ? ? 0.051 ? ? 8 1 0.999 ? ? 7.400 47.060 ? 56.800 ? 13970 1987 ? 1976 99.400 ? ? ? ? 0.028 ? ? ? ? ? ? ? ? 7.070 ? ? ? ? 0.030 ? ? 9 1 0.999 ? ? # _refine.aniso_B[1][1] -1.3400 _refine.aniso_B[1][2] -0.6700 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][2] -1.3400 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] 4.3400 _refine.B_iso_max 229.690 _refine.B_iso_mean 86.0590 _refine.B_iso_min 32.130 _refine.correlation_coeff_Fo_to_Fc 0.9520 _refine.correlation_coeff_Fo_to_Fc_free 0.9470 _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT U VALUES : WITH TLS ADDED' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7DVV _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.4900 _refine.ls_d_res_low 47.0600 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 25129 _refine.ls_number_reflns_R_free 1262 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.8400 _refine.ls_percent_reflns_R_free 4.8000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2189 _refine.ls_R_factor_R_free 0.2463 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2175 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model '7DVS, 4LLN' _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.3020 _refine.pdbx_overall_ESU_R_Free 0.2310 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 27.8480 _refine.overall_SU_ML 0.2560 _refine.overall_SU_R_Cruickshank_DPI 0.3020 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.4900 _refine_hist.d_res_low 47.0600 _refine_hist.number_atoms_solvent 9 _refine_hist.number_atoms_total 3424 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 335 _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent 52.05 _refine_hist.pdbx_number_atoms_protein 2267 _refine_hist.pdbx_number_atoms_nucleic_acid 1148 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.010 0.011 3591 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 1.885 1.465 5070 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 6.005 5.000 277 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 31.945 22.661 109 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 21.691 15.000 482 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 11.820 15.000 12 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.128 0.200 473 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.012 0.020 2234 ? r_gen_planes_refined ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.4950 _refine_ls_shell.d_res_low 2.5590 _refine_ls_shell.number_reflns_all 1909 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 98 _refine_ls_shell.number_reflns_R_work 1811 _refine_ls_shell.percent_reflns_obs 98.8100 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.5410 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.4940 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 7DVV _struct.title 'Heme sensor protein PefR from Streptococcus agalactiae bound to operator DNA (28-mer)' _struct.pdbx_model_details 'heme sensor protein' _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7DVV _struct_keywords.text 'heme-binding, helix-turn-helix, TRANSCRIPTION' _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 3 ? TYR A 26 ? ASN A 3 TYR A 26 1 ? 24 HELX_P HELX_P2 AA2 GLY A 33 ? HIS A 45 ? GLY A 33 HIS A 45 1 ? 13 HELX_P HELX_P3 AA3 ILE A 52 ? LEU A 59 ? ILE A 52 LEU A 59 1 ? 8 HELX_P HELX_P4 AA4 SER A 62 ? GLY A 77 ? SER A 62 GLY A 77 1 ? 16 HELX_P HELX_P5 AA5 THR A 96 ? LEU A 118 ? THR A 96 LEU A 118 1 ? 23 HELX_P HELX_P6 AA6 THR A 122 ? MET A 140 ? THR A 122 MET A 140 1 ? 19 HELX_P HELX_P7 AA7 ASN B 3 ? TYR B 26 ? ASN B 3 TYR B 26 1 ? 24 HELX_P HELX_P8 AA8 GLY B 33 ? HIS B 45 ? GLY B 33 HIS B 45 1 ? 13 HELX_P HELX_P9 AA9 ILE B 52 ? HIS B 60 ? ILE B 52 HIS B 60 1 ? 9 HELX_P HELX_P10 AB1 SER B 62 ? ASN B 76 ? SER B 62 ASN B 76 1 ? 15 HELX_P HELX_P11 AB2 THR B 96 ? LEU B 118 ? THR B 96 LEU B 118 1 ? 23 HELX_P HELX_P12 AB3 THR B 122 ? ASN B 139 ? THR B 122 ASN B 139 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? C DT 1 N3 ? ? ? 1_555 D DA 28 N1 ? ? L DT 1 M DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DT 1 O4 ? ? ? 1_555 D DA 28 N6 ? ? L DT 1 M DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DA 2 N1 ? ? ? 1_555 D DT 27 N3 ? ? L DA 2 M DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DA 2 N6 ? ? ? 1_555 D DT 27 O4 ? ? L DA 2 M DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DA 3 N1 ? ? ? 1_555 D DT 26 N3 ? ? L DA 3 M DT 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DA 3 N6 ? ? ? 1_555 D DT 26 O4 ? ? L DA 3 M DT 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DA 4 N1 ? ? ? 1_555 D DT 25 N3 ? ? L DA 4 M DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DA 4 N6 ? ? ? 1_555 D DT 25 O4 ? ? L DA 4 M DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DA 5 N1 ? ? ? 1_555 D DT 24 N3 ? ? L DA 5 M DT 24 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog10 hydrog ? ? C DT 6 N3 ? ? ? 1_555 D DA 23 N1 ? ? L DT 6 M DA 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DT 6 O4 ? ? ? 1_555 D DA 23 N6 ? ? L DT 6 M DA 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DA 7 N1 ? ? ? 1_555 D DT 22 N3 ? ? L DA 7 M DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DA 7 N6 ? ? ? 1_555 D DT 22 O4 ? ? L DA 7 M DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DG 8 N1 ? ? ? 1_555 D DC 21 N3 ? ? L DG 8 M DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DG 8 N2 ? ? ? 1_555 D DC 21 O2 ? ? L DG 8 M DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DG 8 O6 ? ? ? 1_555 D DC 21 N4 ? ? L DG 8 M DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DT 9 N3 ? ? ? 1_555 D DA 20 N1 ? ? L DT 9 M DA 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DT 9 O4 ? ? ? 1_555 D DA 20 N6 ? ? L DT 9 M DA 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DT 10 N3 ? ? ? 1_555 D DA 19 N1 ? ? L DT 10 M DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DT 10 O4 ? ? ? 1_555 D DA 19 N6 ? ? L DT 10 M DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DC 11 N3 ? ? ? 1_555 D DG 18 N1 ? ? L DC 11 M DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DC 11 N4 ? ? ? 1_555 D DG 18 O6 ? ? L DC 11 M DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DC 11 O2 ? ? ? 1_555 D DG 18 N2 ? ? L DC 11 M DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DT 12 N3 ? ? ? 1_555 D DA 17 N1 ? ? L DT 12 M DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DT 12 O4 ? ? ? 1_555 D DA 17 N6 ? ? L DT 12 M DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DC 13 N3 ? ? ? 1_555 D DG 16 N1 ? ? L DC 13 M DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DC 13 N4 ? ? ? 1_555 D DG 16 O6 ? ? L DC 13 M DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DC 13 O2 ? ? ? 1_555 D DG 16 N2 ? ? L DC 13 M DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DA 14 N1 ? ? ? 1_555 D DT 15 N3 ? ? L DA 14 M DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DA 14 N6 ? ? ? 1_555 D DT 15 O4 ? ? L DA 14 M DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DC 15 N3 ? ? ? 1_555 D DG 14 N1 ? ? L DC 15 M DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DC 15 N4 ? ? ? 1_555 D DG 14 O6 ? ? L DC 15 M DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DC 15 O2 ? ? ? 1_555 D DG 14 N2 ? ? L DC 15 M DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DG 16 N1 ? ? ? 1_555 D DC 13 N3 ? ? L DG 16 M DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DG 16 N2 ? ? ? 1_555 D DC 13 O2 ? ? L DG 16 M DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DG 16 O6 ? ? ? 1_555 D DC 13 N4 ? ? L DG 16 M DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DA 17 N1 ? ? ? 1_555 D DT 12 N3 ? ? L DA 17 M DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DA 17 N6 ? ? ? 1_555 D DT 12 O4 ? ? L DA 17 M DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DT 18 N3 ? ? ? 1_555 D DA 11 N1 ? ? L DT 18 M DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DT 18 O4 ? ? ? 1_555 D DA 11 N6 ? ? L DT 18 M DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C DA 19 N1 ? ? ? 1_555 D DT 10 N3 ? ? L DA 19 M DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C DA 19 N6 ? ? ? 1_555 D DT 10 O4 ? ? L DA 19 M DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C DA 20 N1 ? ? ? 1_555 D DT 9 N3 ? ? L DA 20 M DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? C DA 20 N6 ? ? ? 1_555 D DT 9 O4 ? ? L DA 20 M DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? C DC 21 N3 ? ? ? 1_555 D DG 8 N1 ? ? L DC 21 M DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? C DC 21 N4 ? ? ? 1_555 D DG 8 O6 ? ? L DC 21 M DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? C DC 21 O2 ? ? ? 1_555 D DG 8 N2 ? ? L DC 21 M DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? C DT 22 N3 ? ? ? 1_555 D DA 7 N1 ? ? L DT 22 M DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? C DT 22 O4 ? ? ? 1_555 D DA 7 N6 ? ? L DT 22 M DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? C DA 23 N1 ? ? ? 1_555 D DT 6 N3 ? ? L DA 23 M DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? C DA 23 N6 ? ? ? 1_555 D DT 6 O4 ? ? L DA 23 M DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? C DT 24 N3 ? ? ? 1_555 D DA 5 N1 ? ? L DT 24 M DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? C DT 24 O4 ? ? ? 1_555 D DA 5 N6 ? ? L DT 24 M DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? C DT 25 O4 ? ? ? 1_555 D DA 4 N6 ? ? L DT 25 M DA 4 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog55 hydrog ? ? C DA 26 N1 ? ? ? 1_555 D DT 3 N3 ? ? L DA 26 M DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? C DA 26 N6 ? ? ? 1_555 D DT 3 O4 ? ? L DA 26 M DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? C DA 27 N1 ? ? ? 1_555 D DT 2 N3 ? ? L DA 27 M DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? C DA 27 N6 ? ? ? 1_555 D DT 2 O4 ? ? L DA 27 M DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? C DA 28 N1 ? ? ? 1_555 D DT 1 N3 ? ? L DA 28 M DT 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? C DA 28 N6 ? ? ? 1_555 D DT 1 O4 ? ? L DA 28 M DT 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 MET A 50 ? SER A 51 ? MET A 50 SER A 51 AA1 2 LYS A 91 ? LEU A 95 ? LYS A 91 LEU A 95 AA1 3 ILE A 79 ? PRO A 83 ? ILE A 79 PRO A 83 AA2 1 MET B 50 ? SER B 51 ? MET B 50 SER B 51 AA2 2 LYS B 91 ? LEU B 95 ? LYS B 91 LEU B 95 AA2 3 ILE B 79 ? PRO B 83 ? ILE B 79 PRO B 83 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N MET A 50 ? N MET A 50 O LEU A 93 ? O LEU A 93 AA1 2 3 O TYR A 92 ? O TYR A 92 N VAL A 82 ? N VAL A 82 AA2 1 2 N MET B 50 ? N MET B 50 O LEU B 93 ? O LEU B 93 AA2 2 3 O TYR B 92 ? O TYR B 92 N VAL B 82 ? N VAL B 82 # _atom_sites.entry_id 7DVV _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.009904 _atom_sites.fract_transf_matrix[1][2] 0.005718 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011436 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007753 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 GLU 2 2 ? ? ? A . n A 1 3 ASN 3 3 3 ASN ASN A . n A 1 4 PRO 4 4 4 PRO PRO A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 GLN 6 6 6 GLN GLN A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 ALA 8 8 8 ALA ALA A . n A 1 9 ARG 9 9 9 ARG ARG A . n A 1 10 ILE 10 10 10 ILE ILE A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 ASN 13 13 13 ASN ASN A . n A 1 14 GLN 14 14 14 GLN GLN A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 LYS 17 17 17 LYS LYS A . n A 1 18 TYR 18 18 18 TYR TYR A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 ASP 20 20 20 ASP ASP A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 TYR 22 22 22 TYR TYR A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 TYR 26 26 26 TYR TYR A . n A 1 27 ASP 27 27 27 ASP ASP A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 GLU 29 29 29 GLU GLU A . n A 1 30 HIS 30 30 30 HIS HIS A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 PRO 34 34 34 PRO PRO A . n A 1 35 GLN 35 35 35 GLN GLN A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 HIS 37 37 37 HIS HIS A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 MET 40 40 40 MET MET A . n A 1 41 HIS 41 41 41 HIS HIS A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 TYR 43 43 43 TYR TYR A . n A 1 44 LYS 44 44 44 LYS LYS A . n A 1 45 HIS 45 45 45 HIS HIS A . n A 1 46 PRO 46 46 46 PRO PRO A . n A 1 47 ASP 47 47 47 ASP ASP A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 ASP 49 49 49 ASP ASP A . n A 1 50 MET 50 50 50 MET MET A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 ILE 52 52 52 ILE ILE A . n A 1 53 LYS 53 53 53 LYS LYS A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 GLU 56 56 56 GLU GLU A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 ILE 58 58 58 ILE ILE A . n A 1 59 LEU 59 59 59 LEU LEU A . n A 1 60 HIS 60 60 60 HIS HIS A . n A 1 61 ILE 61 61 61 ILE ILE A . n A 1 62 SER 62 62 62 SER SER A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 SER 64 64 64 SER SER A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 ALA 66 66 66 ALA ALA A . n A 1 67 SER 67 67 67 SER SER A . n A 1 68 ASN 68 68 68 ASN ASN A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 VAL 70 70 70 VAL VAL A . n A 1 71 LYS 71 71 71 LYS LYS A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 MET 73 73 73 MET MET A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 LYS 75 75 75 LYS LYS A . n A 1 76 ASN 76 76 76 ASN ASN A . n A 1 77 GLY 77 77 77 GLY GLY A . n A 1 78 PHE 78 78 78 PHE PHE A . n A 1 79 ILE 79 79 79 ILE ILE A . n A 1 80 ALA 80 80 80 ALA ALA A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 PRO 83 83 83 PRO PRO A . n A 1 84 SER 84 84 84 SER SER A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 THR 86 86 86 THR THR A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 LYS 88 88 88 LYS LYS A . n A 1 89 ARG 89 89 89 ARG ARG A . n A 1 90 VAL 90 90 90 VAL VAL A . n A 1 91 LYS 91 91 91 LYS LYS A . n A 1 92 TYR 92 92 92 TYR TYR A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 TYR 94 94 94 TYR TYR A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 THR 96 96 96 THR THR A . n A 1 97 HIS 97 97 97 HIS HIS A . n A 1 98 LEU 98 98 98 LEU LEU A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 LYS 100 100 100 LYS LYS A . n A 1 101 GLN 101 101 101 GLN GLN A . n A 1 102 LYS 102 102 102 LYS LYS A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 THR 104 104 104 THR THR A . n A 1 105 GLN 105 105 105 GLN GLN A . n A 1 106 PHE 106 106 106 PHE PHE A . n A 1 107 GLU 107 107 107 GLU GLU A . n A 1 108 ILE 108 108 108 ILE ILE A . n A 1 109 PHE 109 109 109 PHE PHE A . n A 1 110 LEU 110 110 110 LEU LEU A . n A 1 111 GLU 111 111 111 GLU GLU A . n A 1 112 LYS 112 112 112 LYS LYS A . n A 1 113 LEU 113 113 113 LEU LEU A . n A 1 114 HIS 114 114 114 HIS HIS A . n A 1 115 SER 115 115 115 SER SER A . n A 1 116 THR 116 116 116 THR THR A . n A 1 117 MET 117 117 117 MET MET A . n A 1 118 LEU 118 118 118 LEU LEU A . n A 1 119 ALA 119 119 119 ALA ALA A . n A 1 120 GLY 120 120 120 GLY GLY A . n A 1 121 ILE 121 121 121 ILE ILE A . n A 1 122 THR 122 122 122 THR THR A . n A 1 123 LYS 123 123 123 LYS LYS A . n A 1 124 GLU 124 124 124 GLU GLU A . n A 1 125 GLU 125 125 125 GLU GLU A . n A 1 126 ILE 126 126 126 ILE ILE A . n A 1 127 ARG 127 127 127 ARG ARG A . n A 1 128 THR 128 128 128 THR THR A . n A 1 129 THR 129 129 129 THR THR A . n A 1 130 LYS 130 130 130 LYS LYS A . n A 1 131 LYS 131 131 131 LYS LYS A . n A 1 132 VAL 132 132 132 VAL VAL A . n A 1 133 ILE 133 133 133 ILE ILE A . n A 1 134 ARG 134 134 134 ARG ARG A . n A 1 135 THR 135 135 135 THR THR A . n A 1 136 LEU 136 136 136 LEU LEU A . n A 1 137 ALA 137 137 137 ALA ALA A . n A 1 138 LYS 138 138 138 LYS LYS A . n A 1 139 ASN 139 139 139 ASN ASN A . n A 1 140 MET 140 140 140 MET MET A . n A 1 141 ALA 141 141 141 ALA ALA A . n A 1 142 MET 142 142 ? ? ? A . n A 1 143 GLU 143 143 ? ? ? A . n A 1 144 ASP 144 144 ? ? ? A . n A 1 145 PHE 145 145 ? ? ? A . n A 1 146 ASP 146 146 ? ? ? A . n A 1 147 SER 147 147 ? ? ? A . n A 1 148 LEU 148 148 ? ? ? A . n A 1 149 GLU 149 149 ? ? ? A . n A 1 150 VAL 150 150 ? ? ? A . n A 1 151 LEU 151 151 ? ? ? A . n A 1 152 PHE 152 152 ? ? ? A . n A 1 153 GLN 153 153 ? ? ? A . n B 1 1 MET 1 1 ? ? ? B . n B 1 2 GLU 2 2 2 GLU GLU B . n B 1 3 ASN 3 3 3 ASN ASN B . n B 1 4 PRO 4 4 4 PRO PRO B . n B 1 5 LEU 5 5 5 LEU LEU B . n B 1 6 GLN 6 6 6 GLN GLN B . n B 1 7 LYS 7 7 7 LYS LYS B . n B 1 8 ALA 8 8 8 ALA ALA B . n B 1 9 ARG 9 9 9 ARG ARG B . n B 1 10 ILE 10 10 10 ILE ILE B . n B 1 11 LEU 11 11 11 LEU LEU B . n B 1 12 VAL 12 12 12 VAL VAL B . n B 1 13 ASN 13 13 13 ASN ASN B . n B 1 14 GLN 14 14 14 GLN GLN B . n B 1 15 LEU 15 15 15 LEU LEU B . n B 1 16 GLU 16 16 16 GLU GLU B . n B 1 17 LYS 17 17 17 LYS LYS B . n B 1 18 TYR 18 18 18 TYR TYR B . n B 1 19 LEU 19 19 19 LEU LEU B . n B 1 20 ASP 20 20 20 ASP ASP B . n B 1 21 ARG 21 21 21 ARG ARG B . n B 1 22 TYR 22 22 22 TYR TYR B . n B 1 23 ALA 23 23 23 ALA ALA B . n B 1 24 LYS 24 24 24 LYS LYS B . n B 1 25 GLU 25 25 25 GLU GLU B . n B 1 26 TYR 26 26 26 TYR TYR B . n B 1 27 ASP 27 27 27 ASP ASP B . n B 1 28 VAL 28 28 28 VAL VAL B . n B 1 29 GLU 29 29 29 GLU GLU B . n B 1 30 HIS 30 30 30 HIS HIS B . n B 1 31 LEU 31 31 31 LEU LEU B . n B 1 32 ALA 32 32 32 ALA ALA B . n B 1 33 GLY 33 33 33 GLY GLY B . n B 1 34 PRO 34 34 34 PRO PRO B . n B 1 35 GLN 35 35 35 GLN GLN B . n B 1 36 GLY 36 36 36 GLY GLY B . n B 1 37 HIS 37 37 37 HIS HIS B . n B 1 38 LEU 38 38 38 LEU LEU B . n B 1 39 VAL 39 39 39 VAL VAL B . n B 1 40 MET 40 40 40 MET MET B . n B 1 41 HIS 41 41 41 HIS HIS B . n B 1 42 LEU 42 42 42 LEU LEU B . n B 1 43 TYR 43 43 43 TYR TYR B . n B 1 44 LYS 44 44 44 LYS LYS B . n B 1 45 HIS 45 45 45 HIS HIS B . n B 1 46 PRO 46 46 46 PRO PRO B . n B 1 47 ASP 47 47 47 ASP ASP B . n B 1 48 LYS 48 48 48 LYS LYS B . n B 1 49 ASP 49 49 49 ASP ASP B . n B 1 50 MET 50 50 50 MET MET B . n B 1 51 SER 51 51 51 SER SER B . n B 1 52 ILE 52 52 52 ILE ILE B . n B 1 53 LYS 53 53 53 LYS LYS B . n B 1 54 ASP 54 54 54 ASP ASP B . n B 1 55 ALA 55 55 55 ALA ALA B . n B 1 56 GLU 56 56 56 GLU GLU B . n B 1 57 GLU 57 57 57 GLU GLU B . n B 1 58 ILE 58 58 58 ILE ILE B . n B 1 59 LEU 59 59 59 LEU LEU B . n B 1 60 HIS 60 60 60 HIS HIS B . n B 1 61 ILE 61 61 61 ILE ILE B . n B 1 62 SER 62 62 62 SER SER B . n B 1 63 LYS 63 63 63 LYS LYS B . n B 1 64 SER 64 64 64 SER SER B . n B 1 65 VAL 65 65 65 VAL VAL B . n B 1 66 ALA 66 66 66 ALA ALA B . n B 1 67 SER 67 67 67 SER SER B . n B 1 68 ASN 68 68 68 ASN ASN B . n B 1 69 LEU 69 69 69 LEU LEU B . n B 1 70 VAL 70 70 70 VAL VAL B . n B 1 71 LYS 71 71 71 LYS LYS B . n B 1 72 ARG 72 72 72 ARG ARG B . n B 1 73 MET 73 73 73 MET MET B . n B 1 74 GLU 74 74 74 GLU GLU B . n B 1 75 LYS 75 75 75 LYS LYS B . n B 1 76 ASN 76 76 76 ASN ASN B . n B 1 77 GLY 77 77 77 GLY GLY B . n B 1 78 PHE 78 78 78 PHE PHE B . n B 1 79 ILE 79 79 79 ILE ILE B . n B 1 80 ALA 80 80 80 ALA ALA B . n B 1 81 ILE 81 81 81 ILE ILE B . n B 1 82 VAL 82 82 82 VAL VAL B . n B 1 83 PRO 83 83 83 PRO PRO B . n B 1 84 SER 84 84 84 SER SER B . n B 1 85 LYS 85 85 85 LYS LYS B . n B 1 86 THR 86 86 86 THR THR B . n B 1 87 ASP 87 87 87 ASP ASP B . n B 1 88 LYS 88 88 88 LYS LYS B . n B 1 89 ARG 89 89 89 ARG ARG B . n B 1 90 VAL 90 90 90 VAL VAL B . n B 1 91 LYS 91 91 91 LYS LYS B . n B 1 92 TYR 92 92 92 TYR TYR B . n B 1 93 LEU 93 93 93 LEU LEU B . n B 1 94 TYR 94 94 94 TYR TYR B . n B 1 95 LEU 95 95 95 LEU LEU B . n B 1 96 THR 96 96 96 THR THR B . n B 1 97 HIS 97 97 97 HIS HIS B . n B 1 98 LEU 98 98 98 LEU LEU B . n B 1 99 GLY 99 99 99 GLY GLY B . n B 1 100 LYS 100 100 100 LYS LYS B . n B 1 101 GLN 101 101 101 GLN GLN B . n B 1 102 LYS 102 102 102 LYS LYS B . n B 1 103 ALA 103 103 103 ALA ALA B . n B 1 104 THR 104 104 104 THR THR B . n B 1 105 GLN 105 105 105 GLN GLN B . n B 1 106 PHE 106 106 106 PHE PHE B . n B 1 107 GLU 107 107 107 GLU GLU B . n B 1 108 ILE 108 108 108 ILE ILE B . n B 1 109 PHE 109 109 109 PHE PHE B . n B 1 110 LEU 110 110 110 LEU LEU B . n B 1 111 GLU 111 111 111 GLU GLU B . n B 1 112 LYS 112 112 112 LYS LYS B . n B 1 113 LEU 113 113 113 LEU LEU B . n B 1 114 HIS 114 114 114 HIS HIS B . n B 1 115 SER 115 115 115 SER SER B . n B 1 116 THR 116 116 116 THR THR B . n B 1 117 MET 117 117 117 MET MET B . n B 1 118 LEU 118 118 118 LEU LEU B . n B 1 119 ALA 119 119 119 ALA ALA B . n B 1 120 GLY 120 120 120 GLY GLY B . n B 1 121 ILE 121 121 121 ILE ILE B . n B 1 122 THR 122 122 122 THR THR B . n B 1 123 LYS 123 123 123 LYS LYS B . n B 1 124 GLU 124 124 124 GLU GLU B . n B 1 125 GLU 125 125 125 GLU GLU B . n B 1 126 ILE 126 126 126 ILE ILE B . n B 1 127 ARG 127 127 127 ARG ARG B . n B 1 128 THR 128 128 128 THR THR B . n B 1 129 THR 129 129 129 THR THR B . n B 1 130 LYS 130 130 130 LYS LYS B . n B 1 131 LYS 131 131 131 LYS LYS B . n B 1 132 VAL 132 132 132 VAL VAL B . n B 1 133 ILE 133 133 133 ILE ILE B . n B 1 134 ARG 134 134 134 ARG ARG B . n B 1 135 THR 135 135 135 THR THR B . n B 1 136 LEU 136 136 136 LEU LEU B . n B 1 137 ALA 137 137 137 ALA ALA B . n B 1 138 LYS 138 138 138 LYS LYS B . n B 1 139 ASN 139 139 139 ASN ASN B . n B 1 140 MET 140 140 140 MET MET B . n B 1 141 ALA 141 141 141 ALA ALA B . n B 1 142 MET 142 142 ? ? ? B . n B 1 143 GLU 143 143 ? ? ? B . n B 1 144 ASP 144 144 ? ? ? B . n B 1 145 PHE 145 145 ? ? ? B . n B 1 146 ASP 146 146 ? ? ? B . n B 1 147 SER 147 147 ? ? ? B . n B 1 148 LEU 148 148 ? ? ? B . n B 1 149 GLU 149 149 ? ? ? B . n B 1 150 VAL 150 150 ? ? ? B . n B 1 151 LEU 151 151 ? ? ? B . n B 1 152 PHE 152 152 ? ? ? B . n B 1 153 GLN 153 153 ? ? ? B . n C 2 1 DT 1 1 1 DT DT L . n C 2 2 DA 2 2 2 DA DA L . n C 2 3 DA 3 3 3 DA DA L . n C 2 4 DA 4 4 4 DA DA L . n C 2 5 DA 5 5 5 DA DA L . n C 2 6 DT 6 6 6 DT DT L . n C 2 7 DA 7 7 7 DA DA L . n C 2 8 DG 8 8 8 DG DG L . n C 2 9 DT 9 9 9 DT DT L . n C 2 10 DT 10 10 10 DT DT L . n C 2 11 DC 11 11 11 DC DC L . n C 2 12 DT 12 12 12 DT DT L . n C 2 13 DC 13 13 13 DC DC L . n C 2 14 DA 14 14 14 DA DA L . n C 2 15 DC 15 15 15 DC DC L . n C 2 16 DG 16 16 16 DG DG L . n C 2 17 DA 17 17 17 DA DA L . n C 2 18 DT 18 18 18 DT DT L . n C 2 19 DA 19 19 19 DA DA L . n C 2 20 DA 20 20 20 DA DA L . n C 2 21 DC 21 21 21 DC DC L . n C 2 22 DT 22 22 22 DT DT L . n C 2 23 DA 23 23 23 DA DA L . n C 2 24 DT 24 24 24 DT DT L . n C 2 25 DT 25 25 25 DT DT L . n C 2 26 DA 26 26 26 DA DA L . n C 2 27 DA 27 27 27 DA DA L . n C 2 28 DA 28 28 28 DA DA L . n D 3 1 DT 1 1 1 DT DT M . n D 3 2 DT 2 2 2 DT DT M . n D 3 3 DT 3 3 3 DT DT M . n D 3 4 DA 4 4 4 DA DA M . n D 3 5 DA 5 5 5 DA DA M . n D 3 6 DT 6 6 6 DT DT M . n D 3 7 DA 7 7 7 DA DA M . n D 3 8 DG 8 8 8 DG DG M . n D 3 9 DT 9 9 9 DT DT M . n D 3 10 DT 10 10 10 DT DT M . n D 3 11 DA 11 11 11 DA DA M . n D 3 12 DT 12 12 12 DT DT M . n D 3 13 DC 13 13 13 DC DC M . n D 3 14 DG 14 14 14 DG DG M . n D 3 15 DT 15 15 15 DT DT M . n D 3 16 DG 16 16 16 DG DG M . n D 3 17 DA 17 17 17 DA DA M . n D 3 18 DG 18 18 18 DG DG M . n D 3 19 DA 19 19 19 DA DA M . n D 3 20 DA 20 20 20 DA DA M . n D 3 21 DC 21 21 21 DC DC M . n D 3 22 DT 22 22 22 DT DT M . n D 3 23 DA 23 23 23 DA DA M . n D 3 24 DT 24 24 24 DT DT M . n D 3 25 DT 25 25 25 DT DT M . n D 3 26 DT 26 26 26 DT DT M . n D 3 27 DT 27 27 27 DT DT M . n D 3 28 DA 28 28 28 DA DA M . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 HOH 1 201 201 HOH HOH A . F 4 HOH 1 201 201 HOH HOH B . G 4 HOH 1 201 201 HOH HOH L . G 4 HOH 2 202 202 HOH HOH L . G 4 HOH 3 203 203 HOH HOH L . G 4 HOH 4 204 204 HOH HOH L . G 4 HOH 5 205 205 HOH HOH L . H 4 HOH 1 201 201 HOH HOH M . H 4 HOH 2 202 202 HOH HOH M . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 11250 ? 1 MORE -79 ? 1 'SSA (A^2)' 22590 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-09-29 2 'Structure model' 1 1 2023-11-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -15.0445 6.2739 -14.2634 0.1054 ? 0.1469 ? 0.0165 ? 0.2270 ? 0.0067 ? 0.2221 ? 4.0835 ? -0.6346 ? 2.3739 ? 1.0039 ? 1.0312 ? 3.5518 ? 0.3596 ? 0.7166 ? 0.0820 ? -0.1982 ? -0.3455 ? -0.0662 ? 0.0067 ? 0.0778 ? -0.0141 ? 2 'X-RAY DIFFRACTION' ? refined -35.2791 22.7707 -14.3303 0.1537 ? 0.1623 ? -0.0079 ? 0.1848 ? 0.0078 ? 0.2891 ? 2.8400 ? -1.2596 ? -1.8707 ? 1.5000 ? -0.3152 ? 2.6261 ? 0.4931 ? 0.6161 ? -0.0552 ? -0.3672 ? -0.4458 ? 0.1026 ? -0.1405 ? -0.1935 ? -0.0474 ? 3 'X-RAY DIFFRACTION' ? refined -45.1066 5.8340 1.1693 0.0707 ? -0.0364 ? 0.0109 ? 0.0227 ? 0.0113 ? 0.3717 ? 4.9115 ? 0.1055 ? -0.9840 ? 1.0130 ? 0.1162 ? 1.2893 ? -0.0318 ? -0.0219 ? -0.6420 ? 0.0297 ? -0.0379 ? 0.3797 ? 0.2754 ? -0.1498 ? 0.0697 ? 4 'X-RAY DIFFRACTION' ? refined -5.3681 23.3020 1.1736 0.0717 ? -0.0371 ? -0.0149 ? 0.0277 ? -0.0045 ? 0.3513 ? 5.1663 ? 0.3042 ? 1.0801 ? 0.5847 ? 0.0869 ? 1.1557 ? -0.0634 ? -0.0136 ? 0.5758 ? -0.0073 ? -0.0096 ? -0.2630 ? -0.2558 ? 0.1517 ? 0.0730 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 3 ? ? ? A 141 ? ? ? 2 'X-RAY DIFFRACTION' 2 ? ? B 2 ? ? ? B 141 ? ? ? 3 'X-RAY DIFFRACTION' 3 ? ? L 1 ? ? ? L 14 ? ? ? 4 'X-RAY DIFFRACTION' 3 ? ? M 15 ? ? ? M 28 ? ? ? 5 'X-RAY DIFFRACTION' 4 ? ? L 15 ? ? ? L 28 ? ? ? 6 'X-RAY DIFFRACTION' 4 ? ? M 1 ? ? ? M 14 ? ? ? # _pdbx_phasing_MR.entry_id 7DVV _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.500 _pdbx_phasing_MR.d_res_low_rotation 47.010 _pdbx_phasing_MR.d_res_high_translation 2.500 _pdbx_phasing_MR.d_res_low_translation 47.010 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0258 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? 'Jun 1, 2017' 2 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? 2.7.17 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 4 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? 0.8.9.2 5 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? 'Jun 1, 2017' 6 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" L DA 5 ? ? P L DT 6 ? ? 1.534 1.607 -0.073 0.012 Y 2 1 "O3'" M DT 24 ? ? P M DT 25 ? ? 1.492 1.607 -0.115 0.012 Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O5'" L DT 9 ? ? P L DT 9 ? ? OP1 L DT 9 ? ? 94.66 105.70 -11.04 0.90 N 2 1 "C1'" L DC 13 ? ? "O4'" L DC 13 ? ? "C4'" L DC 13 ? ? 103.73 110.10 -6.37 1.00 N 3 1 "O5'" L DA 17 ? ? P L DA 17 ? ? OP1 L DA 17 ? ? 119.61 110.70 8.91 1.20 N 4 1 "O5'" M DA 4 ? ? P M DA 4 ? ? OP1 M DA 4 ? ? 100.09 105.70 -5.61 0.90 N 5 1 "O5'" M DT 9 ? ? P M DT 9 ? ? OP1 M DT 9 ? ? 99.35 105.70 -6.35 0.90 N 6 1 "O5'" M DT 10 ? ? P M DT 10 ? ? OP1 M DT 10 ? ? 98.78 105.70 -6.92 0.90 N 7 1 "C1'" M DC 13 ? ? "O4'" M DC 13 ? ? "C4'" M DC 13 ? ? 103.46 110.10 -6.64 1.00 N 8 1 "C1'" M DC 21 ? ? "O4'" M DC 21 ? ? "C4'" M DC 21 ? ? 103.18 110.10 -6.92 1.00 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 30 ? ? 73.68 -0.29 2 1 MET A 140 ? ? -93.62 57.32 3 1 HIS B 30 ? ? 77.63 -0.57 4 1 TYR B 43 ? ? -50.39 -72.31 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A GLU 2 ? A GLU 2 3 1 Y 1 A MET 142 ? A MET 142 4 1 Y 1 A GLU 143 ? A GLU 143 5 1 Y 1 A ASP 144 ? A ASP 144 6 1 Y 1 A PHE 145 ? A PHE 145 7 1 Y 1 A ASP 146 ? A ASP 146 8 1 Y 1 A SER 147 ? A SER 147 9 1 Y 1 A LEU 148 ? A LEU 148 10 1 Y 1 A GLU 149 ? A GLU 149 11 1 Y 1 A VAL 150 ? A VAL 150 12 1 Y 1 A LEU 151 ? A LEU 151 13 1 Y 1 A PHE 152 ? A PHE 152 14 1 Y 1 A GLN 153 ? A GLN 153 15 1 Y 1 B MET 1 ? B MET 1 16 1 Y 1 B MET 142 ? B MET 142 17 1 Y 1 B GLU 143 ? B GLU 143 18 1 Y 1 B ASP 144 ? B ASP 144 19 1 Y 1 B PHE 145 ? B PHE 145 20 1 Y 1 B ASP 146 ? B ASP 146 21 1 Y 1 B SER 147 ? B SER 147 22 1 Y 1 B LEU 148 ? B LEU 148 23 1 Y 1 B GLU 149 ? B GLU 149 24 1 Y 1 B VAL 150 ? B VAL 150 25 1 Y 1 B LEU 151 ? B LEU 151 26 1 Y 1 B PHE 152 ? B PHE 152 27 1 Y 1 B GLN 153 ? B GLN 153 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DA OP3 O N N 74 DA P P N N 75 DA OP1 O N N 76 DA OP2 O N N 77 DA "O5'" O N N 78 DA "C5'" C N N 79 DA "C4'" C N R 80 DA "O4'" O N N 81 DA "C3'" C N S 82 DA "O3'" O N N 83 DA "C2'" C N N 84 DA "C1'" C N R 85 DA N9 N Y N 86 DA C8 C Y N 87 DA N7 N Y N 88 DA C5 C Y N 89 DA C6 C Y N 90 DA N6 N N N 91 DA N1 N Y N 92 DA C2 C Y N 93 DA N3 N Y N 94 DA C4 C Y N 95 DA HOP3 H N N 96 DA HOP2 H N N 97 DA "H5'" H N N 98 DA "H5''" H N N 99 DA "H4'" H N N 100 DA "H3'" H N N 101 DA "HO3'" H N N 102 DA "H2'" H N N 103 DA "H2''" H N N 104 DA "H1'" H N N 105 DA H8 H N N 106 DA H61 H N N 107 DA H62 H N N 108 DA H2 H N N 109 DC OP3 O N N 110 DC P P N N 111 DC OP1 O N N 112 DC OP2 O N N 113 DC "O5'" O N N 114 DC "C5'" C N N 115 DC "C4'" C N R 116 DC "O4'" O N N 117 DC "C3'" C N S 118 DC "O3'" O N N 119 DC "C2'" C N N 120 DC "C1'" C N R 121 DC N1 N N N 122 DC C2 C N N 123 DC O2 O N N 124 DC N3 N N N 125 DC C4 C N N 126 DC N4 N N N 127 DC C5 C N N 128 DC C6 C N N 129 DC HOP3 H N N 130 DC HOP2 H N N 131 DC "H5'" H N N 132 DC "H5''" H N N 133 DC "H4'" H N N 134 DC "H3'" H N N 135 DC "HO3'" H N N 136 DC "H2'" H N N 137 DC "H2''" H N N 138 DC "H1'" H N N 139 DC H41 H N N 140 DC H42 H N N 141 DC H5 H N N 142 DC H6 H N N 143 DG OP3 O N N 144 DG P P N N 145 DG OP1 O N N 146 DG OP2 O N N 147 DG "O5'" O N N 148 DG "C5'" C N N 149 DG "C4'" C N R 150 DG "O4'" O N N 151 DG "C3'" C N S 152 DG "O3'" O N N 153 DG "C2'" C N N 154 DG "C1'" C N R 155 DG N9 N Y N 156 DG C8 C Y N 157 DG N7 N Y N 158 DG C5 C Y N 159 DG C6 C N N 160 DG O6 O N N 161 DG N1 N N N 162 DG C2 C N N 163 DG N2 N N N 164 DG N3 N N N 165 DG C4 C Y N 166 DG HOP3 H N N 167 DG HOP2 H N N 168 DG "H5'" H N N 169 DG "H5''" H N N 170 DG "H4'" H N N 171 DG "H3'" H N N 172 DG "HO3'" H N N 173 DG "H2'" H N N 174 DG "H2''" H N N 175 DG "H1'" H N N 176 DG H8 H N N 177 DG H1 H N N 178 DG H21 H N N 179 DG H22 H N N 180 DT OP3 O N N 181 DT P P N N 182 DT OP1 O N N 183 DT OP2 O N N 184 DT "O5'" O N N 185 DT "C5'" C N N 186 DT "C4'" C N R 187 DT "O4'" O N N 188 DT "C3'" C N S 189 DT "O3'" O N N 190 DT "C2'" C N N 191 DT "C1'" C N R 192 DT N1 N N N 193 DT C2 C N N 194 DT O2 O N N 195 DT N3 N N N 196 DT C4 C N N 197 DT O4 O N N 198 DT C5 C N N 199 DT C7 C N N 200 DT C6 C N N 201 DT HOP3 H N N 202 DT HOP2 H N N 203 DT "H5'" H N N 204 DT "H5''" H N N 205 DT "H4'" H N N 206 DT "H3'" H N N 207 DT "HO3'" H N N 208 DT "H2'" H N N 209 DT "H2''" H N N 210 DT "H1'" H N N 211 DT H3 H N N 212 DT H71 H N N 213 DT H72 H N N 214 DT H73 H N N 215 DT H6 H N N 216 GLN N N N N 217 GLN CA C N S 218 GLN C C N N 219 GLN O O N N 220 GLN CB C N N 221 GLN CG C N N 222 GLN CD C N N 223 GLN OE1 O N N 224 GLN NE2 N N N 225 GLN OXT O N N 226 GLN H H N N 227 GLN H2 H N N 228 GLN HA H N N 229 GLN HB2 H N N 230 GLN HB3 H N N 231 GLN HG2 H N N 232 GLN HG3 H N N 233 GLN HE21 H N N 234 GLN HE22 H N N 235 GLN HXT H N N 236 GLU N N N N 237 GLU CA C N S 238 GLU C C N N 239 GLU O O N N 240 GLU CB C N N 241 GLU CG C N N 242 GLU CD C N N 243 GLU OE1 O N N 244 GLU OE2 O N N 245 GLU OXT O N N 246 GLU H H N N 247 GLU H2 H N N 248 GLU HA H N N 249 GLU HB2 H N N 250 GLU HB3 H N N 251 GLU HG2 H N N 252 GLU HG3 H N N 253 GLU HE2 H N N 254 GLU HXT H N N 255 GLY N N N N 256 GLY CA C N N 257 GLY C C N N 258 GLY O O N N 259 GLY OXT O N N 260 GLY H H N N 261 GLY H2 H N N 262 GLY HA2 H N N 263 GLY HA3 H N N 264 GLY HXT H N N 265 HIS N N N N 266 HIS CA C N S 267 HIS C C N N 268 HIS O O N N 269 HIS CB C N N 270 HIS CG C Y N 271 HIS ND1 N Y N 272 HIS CD2 C Y N 273 HIS CE1 C Y N 274 HIS NE2 N Y N 275 HIS OXT O N N 276 HIS H H N N 277 HIS H2 H N N 278 HIS HA H N N 279 HIS HB2 H N N 280 HIS HB3 H N N 281 HIS HD1 H N N 282 HIS HD2 H N N 283 HIS HE1 H N N 284 HIS HE2 H N N 285 HIS HXT H N N 286 HOH O O N N 287 HOH H1 H N N 288 HOH H2 H N N 289 ILE N N N N 290 ILE CA C N S 291 ILE C C N N 292 ILE O O N N 293 ILE CB C N S 294 ILE CG1 C N N 295 ILE CG2 C N N 296 ILE CD1 C N N 297 ILE OXT O N N 298 ILE H H N N 299 ILE H2 H N N 300 ILE HA H N N 301 ILE HB H N N 302 ILE HG12 H N N 303 ILE HG13 H N N 304 ILE HG21 H N N 305 ILE HG22 H N N 306 ILE HG23 H N N 307 ILE HD11 H N N 308 ILE HD12 H N N 309 ILE HD13 H N N 310 ILE HXT H N N 311 LEU N N N N 312 LEU CA C N S 313 LEU C C N N 314 LEU O O N N 315 LEU CB C N N 316 LEU CG C N N 317 LEU CD1 C N N 318 LEU CD2 C N N 319 LEU OXT O N N 320 LEU H H N N 321 LEU H2 H N N 322 LEU HA H N N 323 LEU HB2 H N N 324 LEU HB3 H N N 325 LEU HG H N N 326 LEU HD11 H N N 327 LEU HD12 H N N 328 LEU HD13 H N N 329 LEU HD21 H N N 330 LEU HD22 H N N 331 LEU HD23 H N N 332 LEU HXT H N N 333 LYS N N N N 334 LYS CA C N S 335 LYS C C N N 336 LYS O O N N 337 LYS CB C N N 338 LYS CG C N N 339 LYS CD C N N 340 LYS CE C N N 341 LYS NZ N N N 342 LYS OXT O N N 343 LYS H H N N 344 LYS H2 H N N 345 LYS HA H N N 346 LYS HB2 H N N 347 LYS HB3 H N N 348 LYS HG2 H N N 349 LYS HG3 H N N 350 LYS HD2 H N N 351 LYS HD3 H N N 352 LYS HE2 H N N 353 LYS HE3 H N N 354 LYS HZ1 H N N 355 LYS HZ2 H N N 356 LYS HZ3 H N N 357 LYS HXT H N N 358 MET N N N N 359 MET CA C N S 360 MET C C N N 361 MET O O N N 362 MET CB C N N 363 MET CG C N N 364 MET SD S N N 365 MET CE C N N 366 MET OXT O N N 367 MET H H N N 368 MET H2 H N N 369 MET HA H N N 370 MET HB2 H N N 371 MET HB3 H N N 372 MET HG2 H N N 373 MET HG3 H N N 374 MET HE1 H N N 375 MET HE2 H N N 376 MET HE3 H N N 377 MET HXT H N N 378 PHE N N N N 379 PHE CA C N S 380 PHE C C N N 381 PHE O O N N 382 PHE CB C N N 383 PHE CG C Y N 384 PHE CD1 C Y N 385 PHE CD2 C Y N 386 PHE CE1 C Y N 387 PHE CE2 C Y N 388 PHE CZ C Y N 389 PHE OXT O N N 390 PHE H H N N 391 PHE H2 H N N 392 PHE HA H N N 393 PHE HB2 H N N 394 PHE HB3 H N N 395 PHE HD1 H N N 396 PHE HD2 H N N 397 PHE HE1 H N N 398 PHE HE2 H N N 399 PHE HZ H N N 400 PHE HXT H N N 401 PRO N N N N 402 PRO CA C N S 403 PRO C C N N 404 PRO O O N N 405 PRO CB C N N 406 PRO CG C N N 407 PRO CD C N N 408 PRO OXT O N N 409 PRO H H N N 410 PRO HA H N N 411 PRO HB2 H N N 412 PRO HB3 H N N 413 PRO HG2 H N N 414 PRO HG3 H N N 415 PRO HD2 H N N 416 PRO HD3 H N N 417 PRO HXT H N N 418 SER N N N N 419 SER CA C N S 420 SER C C N N 421 SER O O N N 422 SER CB C N N 423 SER OG O N N 424 SER OXT O N N 425 SER H H N N 426 SER H2 H N N 427 SER HA H N N 428 SER HB2 H N N 429 SER HB3 H N N 430 SER HG H N N 431 SER HXT H N N 432 THR N N N N 433 THR CA C N S 434 THR C C N N 435 THR O O N N 436 THR CB C N R 437 THR OG1 O N N 438 THR CG2 C N N 439 THR OXT O N N 440 THR H H N N 441 THR H2 H N N 442 THR HA H N N 443 THR HB H N N 444 THR HG1 H N N 445 THR HG21 H N N 446 THR HG22 H N N 447 THR HG23 H N N 448 THR HXT H N N 449 TYR N N N N 450 TYR CA C N S 451 TYR C C N N 452 TYR O O N N 453 TYR CB C N N 454 TYR CG C Y N 455 TYR CD1 C Y N 456 TYR CD2 C Y N 457 TYR CE1 C Y N 458 TYR CE2 C Y N 459 TYR CZ C Y N 460 TYR OH O N N 461 TYR OXT O N N 462 TYR H H N N 463 TYR H2 H N N 464 TYR HA H N N 465 TYR HB2 H N N 466 TYR HB3 H N N 467 TYR HD1 H N N 468 TYR HD2 H N N 469 TYR HE1 H N N 470 TYR HE2 H N N 471 TYR HH H N N 472 TYR HXT H N N 473 VAL N N N N 474 VAL CA C N S 475 VAL C C N N 476 VAL O O N N 477 VAL CB C N N 478 VAL CG1 C N N 479 VAL CG2 C N N 480 VAL OXT O N N 481 VAL H H N N 482 VAL H2 H N N 483 VAL HA H N N 484 VAL HB H N N 485 VAL HG11 H N N 486 VAL HG12 H N N 487 VAL HG13 H N N 488 VAL HG21 H N N 489 VAL HG22 H N N 490 VAL HG23 H N N 491 VAL HXT H N N 492 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 DT OP3 P sing N N 182 DT OP3 HOP3 sing N N 183 DT P OP1 doub N N 184 DT P OP2 sing N N 185 DT P "O5'" sing N N 186 DT OP2 HOP2 sing N N 187 DT "O5'" "C5'" sing N N 188 DT "C5'" "C4'" sing N N 189 DT "C5'" "H5'" sing N N 190 DT "C5'" "H5''" sing N N 191 DT "C4'" "O4'" sing N N 192 DT "C4'" "C3'" sing N N 193 DT "C4'" "H4'" sing N N 194 DT "O4'" "C1'" sing N N 195 DT "C3'" "O3'" sing N N 196 DT "C3'" "C2'" sing N N 197 DT "C3'" "H3'" sing N N 198 DT "O3'" "HO3'" sing N N 199 DT "C2'" "C1'" sing N N 200 DT "C2'" "H2'" sing N N 201 DT "C2'" "H2''" sing N N 202 DT "C1'" N1 sing N N 203 DT "C1'" "H1'" sing N N 204 DT N1 C2 sing N N 205 DT N1 C6 sing N N 206 DT C2 O2 doub N N 207 DT C2 N3 sing N N 208 DT N3 C4 sing N N 209 DT N3 H3 sing N N 210 DT C4 O4 doub N N 211 DT C4 C5 sing N N 212 DT C5 C7 sing N N 213 DT C5 C6 doub N N 214 DT C7 H71 sing N N 215 DT C7 H72 sing N N 216 DT C7 H73 sing N N 217 DT C6 H6 sing N N 218 GLN N CA sing N N 219 GLN N H sing N N 220 GLN N H2 sing N N 221 GLN CA C sing N N 222 GLN CA CB sing N N 223 GLN CA HA sing N N 224 GLN C O doub N N 225 GLN C OXT sing N N 226 GLN CB CG sing N N 227 GLN CB HB2 sing N N 228 GLN CB HB3 sing N N 229 GLN CG CD sing N N 230 GLN CG HG2 sing N N 231 GLN CG HG3 sing N N 232 GLN CD OE1 doub N N 233 GLN CD NE2 sing N N 234 GLN NE2 HE21 sing N N 235 GLN NE2 HE22 sing N N 236 GLN OXT HXT sing N N 237 GLU N CA sing N N 238 GLU N H sing N N 239 GLU N H2 sing N N 240 GLU CA C sing N N 241 GLU CA CB sing N N 242 GLU CA HA sing N N 243 GLU C O doub N N 244 GLU C OXT sing N N 245 GLU CB CG sing N N 246 GLU CB HB2 sing N N 247 GLU CB HB3 sing N N 248 GLU CG CD sing N N 249 GLU CG HG2 sing N N 250 GLU CG HG3 sing N N 251 GLU CD OE1 doub N N 252 GLU CD OE2 sing N N 253 GLU OE2 HE2 sing N N 254 GLU OXT HXT sing N N 255 GLY N CA sing N N 256 GLY N H sing N N 257 GLY N H2 sing N N 258 GLY CA C sing N N 259 GLY CA HA2 sing N N 260 GLY CA HA3 sing N N 261 GLY C O doub N N 262 GLY C OXT sing N N 263 GLY OXT HXT sing N N 264 HIS N CA sing N N 265 HIS N H sing N N 266 HIS N H2 sing N N 267 HIS CA C sing N N 268 HIS CA CB sing N N 269 HIS CA HA sing N N 270 HIS C O doub N N 271 HIS C OXT sing N N 272 HIS CB CG sing N N 273 HIS CB HB2 sing N N 274 HIS CB HB3 sing N N 275 HIS CG ND1 sing Y N 276 HIS CG CD2 doub Y N 277 HIS ND1 CE1 doub Y N 278 HIS ND1 HD1 sing N N 279 HIS CD2 NE2 sing Y N 280 HIS CD2 HD2 sing N N 281 HIS CE1 NE2 sing Y N 282 HIS CE1 HE1 sing N N 283 HIS NE2 HE2 sing N N 284 HIS OXT HXT sing N N 285 HOH O H1 sing N N 286 HOH O H2 sing N N 287 ILE N CA sing N N 288 ILE N H sing N N 289 ILE N H2 sing N N 290 ILE CA C sing N N 291 ILE CA CB sing N N 292 ILE CA HA sing N N 293 ILE C O doub N N 294 ILE C OXT sing N N 295 ILE CB CG1 sing N N 296 ILE CB CG2 sing N N 297 ILE CB HB sing N N 298 ILE CG1 CD1 sing N N 299 ILE CG1 HG12 sing N N 300 ILE CG1 HG13 sing N N 301 ILE CG2 HG21 sing N N 302 ILE CG2 HG22 sing N N 303 ILE CG2 HG23 sing N N 304 ILE CD1 HD11 sing N N 305 ILE CD1 HD12 sing N N 306 ILE CD1 HD13 sing N N 307 ILE OXT HXT sing N N 308 LEU N CA sing N N 309 LEU N H sing N N 310 LEU N H2 sing N N 311 LEU CA C sing N N 312 LEU CA CB sing N N 313 LEU CA HA sing N N 314 LEU C O doub N N 315 LEU C OXT sing N N 316 LEU CB CG sing N N 317 LEU CB HB2 sing N N 318 LEU CB HB3 sing N N 319 LEU CG CD1 sing N N 320 LEU CG CD2 sing N N 321 LEU CG HG sing N N 322 LEU CD1 HD11 sing N N 323 LEU CD1 HD12 sing N N 324 LEU CD1 HD13 sing N N 325 LEU CD2 HD21 sing N N 326 LEU CD2 HD22 sing N N 327 LEU CD2 HD23 sing N N 328 LEU OXT HXT sing N N 329 LYS N CA sing N N 330 LYS N H sing N N 331 LYS N H2 sing N N 332 LYS CA C sing N N 333 LYS CA CB sing N N 334 LYS CA HA sing N N 335 LYS C O doub N N 336 LYS C OXT sing N N 337 LYS CB CG sing N N 338 LYS CB HB2 sing N N 339 LYS CB HB3 sing N N 340 LYS CG CD sing N N 341 LYS CG HG2 sing N N 342 LYS CG HG3 sing N N 343 LYS CD CE sing N N 344 LYS CD HD2 sing N N 345 LYS CD HD3 sing N N 346 LYS CE NZ sing N N 347 LYS CE HE2 sing N N 348 LYS CE HE3 sing N N 349 LYS NZ HZ1 sing N N 350 LYS NZ HZ2 sing N N 351 LYS NZ HZ3 sing N N 352 LYS OXT HXT sing N N 353 MET N CA sing N N 354 MET N H sing N N 355 MET N H2 sing N N 356 MET CA C sing N N 357 MET CA CB sing N N 358 MET CA HA sing N N 359 MET C O doub N N 360 MET C OXT sing N N 361 MET CB CG sing N N 362 MET CB HB2 sing N N 363 MET CB HB3 sing N N 364 MET CG SD sing N N 365 MET CG HG2 sing N N 366 MET CG HG3 sing N N 367 MET SD CE sing N N 368 MET CE HE1 sing N N 369 MET CE HE2 sing N N 370 MET CE HE3 sing N N 371 MET OXT HXT sing N N 372 PHE N CA sing N N 373 PHE N H sing N N 374 PHE N H2 sing N N 375 PHE CA C sing N N 376 PHE CA CB sing N N 377 PHE CA HA sing N N 378 PHE C O doub N N 379 PHE C OXT sing N N 380 PHE CB CG sing N N 381 PHE CB HB2 sing N N 382 PHE CB HB3 sing N N 383 PHE CG CD1 doub Y N 384 PHE CG CD2 sing Y N 385 PHE CD1 CE1 sing Y N 386 PHE CD1 HD1 sing N N 387 PHE CD2 CE2 doub Y N 388 PHE CD2 HD2 sing N N 389 PHE CE1 CZ doub Y N 390 PHE CE1 HE1 sing N N 391 PHE CE2 CZ sing Y N 392 PHE CE2 HE2 sing N N 393 PHE CZ HZ sing N N 394 PHE OXT HXT sing N N 395 PRO N CA sing N N 396 PRO N CD sing N N 397 PRO N H sing N N 398 PRO CA C sing N N 399 PRO CA CB sing N N 400 PRO CA HA sing N N 401 PRO C O doub N N 402 PRO C OXT sing N N 403 PRO CB CG sing N N 404 PRO CB HB2 sing N N 405 PRO CB HB3 sing N N 406 PRO CG CD sing N N 407 PRO CG HG2 sing N N 408 PRO CG HG3 sing N N 409 PRO CD HD2 sing N N 410 PRO CD HD3 sing N N 411 PRO OXT HXT sing N N 412 SER N CA sing N N 413 SER N H sing N N 414 SER N H2 sing N N 415 SER CA C sing N N 416 SER CA CB sing N N 417 SER CA HA sing N N 418 SER C O doub N N 419 SER C OXT sing N N 420 SER CB OG sing N N 421 SER CB HB2 sing N N 422 SER CB HB3 sing N N 423 SER OG HG sing N N 424 SER OXT HXT sing N N 425 THR N CA sing N N 426 THR N H sing N N 427 THR N H2 sing N N 428 THR CA C sing N N 429 THR CA CB sing N N 430 THR CA HA sing N N 431 THR C O doub N N 432 THR C OXT sing N N 433 THR CB OG1 sing N N 434 THR CB CG2 sing N N 435 THR CB HB sing N N 436 THR OG1 HG1 sing N N 437 THR CG2 HG21 sing N N 438 THR CG2 HG22 sing N N 439 THR CG2 HG23 sing N N 440 THR OXT HXT sing N N 441 TYR N CA sing N N 442 TYR N H sing N N 443 TYR N H2 sing N N 444 TYR CA C sing N N 445 TYR CA CB sing N N 446 TYR CA HA sing N N 447 TYR C O doub N N 448 TYR C OXT sing N N 449 TYR CB CG sing N N 450 TYR CB HB2 sing N N 451 TYR CB HB3 sing N N 452 TYR CG CD1 doub Y N 453 TYR CG CD2 sing Y N 454 TYR CD1 CE1 sing Y N 455 TYR CD1 HD1 sing N N 456 TYR CD2 CE2 doub Y N 457 TYR CD2 HD2 sing N N 458 TYR CE1 CZ doub Y N 459 TYR CE1 HE1 sing N N 460 TYR CE2 CZ sing Y N 461 TYR CE2 HE2 sing N N 462 TYR CZ OH sing N N 463 TYR OH HH sing N N 464 TYR OXT HXT sing N N 465 VAL N CA sing N N 466 VAL N H sing N N 467 VAL N H2 sing N N 468 VAL CA C sing N N 469 VAL CA CB sing N N 470 VAL CA HA sing N N 471 VAL C O doub N N 472 VAL C OXT sing N N 473 VAL CB CG1 sing N N 474 VAL CB CG2 sing N N 475 VAL CB HB sing N N 476 VAL CG1 HG11 sing N N 477 VAL CG1 HG12 sing N N 478 VAL CG1 HG13 sing N N 479 VAL CG2 HG21 sing N N 480 VAL CG2 HG22 sing N N 481 VAL CG2 HG23 sing N N 482 VAL OXT HXT sing N N 483 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 7DVV 'double helix' 7DVV 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DT 1 1_555 D DA 28 1_555 -1.025 -0.331 -0.156 0.448 -4.223 -6.054 1 L_DT1:DA28_M L 1 ? M 28 ? 20 1 1 C DA 2 1_555 D DT 27 1_555 0.226 -0.412 -0.456 -9.920 -13.243 -4.910 2 L_DA2:DT27_M L 2 ? M 27 ? 20 1 1 C DA 3 1_555 D DT 26 1_555 0.693 -0.031 -0.153 -2.541 -14.302 10.773 3 L_DA3:DT26_M L 3 ? M 26 ? 20 1 1 C DA 4 1_555 D DT 25 1_555 0.501 -0.340 -0.016 -0.223 -6.575 -5.166 4 L_DA4:DT25_M L 4 ? M 25 ? 20 1 1 C DA 5 1_555 D DT 24 1_555 -0.344 0.748 0.569 7.906 -12.441 7.116 5 L_DA5:DT24_M L 5 ? M 24 ? ? ? 1 C DT 6 1_555 D DA 23 1_555 0.209 -0.524 -0.018 4.332 -14.658 -3.677 6 L_DT6:DA23_M L 6 ? M 23 ? 20 1 1 C DA 7 1_555 D DT 22 1_555 -0.054 -0.501 -0.224 -1.402 -4.076 -2.037 7 L_DA7:DT22_M L 7 ? M 22 ? 20 1 1 C DG 8 1_555 D DC 21 1_555 0.149 0.164 -0.137 -1.838 -13.575 5.834 8 L_DG8:DC21_M L 8 ? M 21 ? 19 1 1 C DT 9 1_555 D DA 20 1_555 0.035 -0.006 0.193 -2.518 -7.179 -2.391 9 L_DT9:DA20_M L 9 ? M 20 ? 20 1 1 C DT 10 1_555 D DA 19 1_555 -0.058 -0.077 -0.065 5.280 -5.902 3.499 10 L_DT10:DA19_M L 10 ? M 19 ? 20 1 1 C DC 11 1_555 D DG 18 1_555 -0.238 -0.502 -0.110 0.357 -11.377 -0.390 11 L_DC11:DG18_M L 11 ? M 18 ? 19 1 1 C DT 12 1_555 D DA 17 1_555 -0.098 -0.271 -0.164 13.850 -7.314 -3.819 12 L_DT12:DA17_M L 12 ? M 17 ? 20 1 1 C DC 13 1_555 D DG 16 1_555 0.272 -0.007 -0.128 13.785 -10.868 5.001 13 L_DC13:DG16_M L 13 ? M 16 ? 19 1 1 C DA 14 1_555 D DT 15 1_555 -0.170 -0.047 -0.394 -4.192 -8.994 -3.837 14 L_DA14:DT15_M L 14 ? M 15 ? 20 1 1 C DC 15 1_555 D DG 14 1_555 0.067 0.053 -0.001 3.280 -6.977 0.250 15 L_DC15:DG14_M L 15 ? M 14 ? 19 1 1 C DG 16 1_555 D DC 13 1_555 -0.428 -0.125 -0.109 -12.541 -8.993 3.535 16 L_DG16:DC13_M L 16 ? M 13 ? 19 1 1 C DA 17 1_555 D DT 12 1_555 -0.126 -0.197 0.030 -12.829 -2.764 -0.212 17 L_DA17:DT12_M L 17 ? M 12 ? 20 1 1 C DT 18 1_555 D DA 11 1_555 -0.214 -0.581 -0.046 8.356 -6.701 4.903 18 L_DT18:DA11_M L 18 ? M 11 ? 20 1 1 C DA 19 1_555 D DT 10 1_555 -0.192 -0.186 -0.117 -6.134 -6.576 1.247 19 L_DA19:DT10_M L 19 ? M 10 ? 20 1 1 C DA 20 1_555 D DT 9 1_555 -0.014 -0.077 0.268 4.053 -4.890 -4.403 20 L_DA20:DT9_M L 20 ? M 9 ? 20 1 1 C DC 21 1_555 D DG 8 1_555 0.116 0.179 -0.265 -0.663 -11.774 6.593 21 L_DC21:DG8_M L 21 ? M 8 ? 19 1 1 C DT 22 1_555 D DA 7 1_555 -0.266 -0.410 -0.077 1.536 -3.871 -4.527 22 L_DT22:DA7_M L 22 ? M 7 ? 20 1 1 C DA 23 1_555 D DT 6 1_555 -0.058 -0.529 -0.011 -5.485 -14.957 -1.262 23 L_DA23:DT6_M L 23 ? M 6 ? 20 1 1 C DT 24 1_555 D DA 5 1_555 -0.211 -0.287 0.189 -1.874 -9.393 -0.917 24 L_DT24:DA5_M L 24 ? M 5 ? 20 1 1 C DT 25 1_555 D DA 4 1_555 -0.569 3.228 -0.072 -1.189 -5.096 -97.787 25 L_DT25:DA4_M L 25 ? M 4 ? ? ? 1 C DA 26 1_555 D DT 3 1_555 1.178 -0.385 -0.133 -0.038 -12.837 6.096 26 L_DA26:DT3_M L 26 ? M 3 ? 20 1 1 C DA 27 1_555 D DT 2 1_555 0.854 -0.408 -0.275 -0.844 -12.793 -2.575 27 L_DA27:DT2_M L 27 ? M 2 ? 20 1 1 C DA 28 1_555 D DT 1 1_555 0.217 -0.309 -0.041 1.301 -6.113 13.997 28 L_DA28:DT1_M L 28 ? M 1 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DT 1 1_555 D DA 28 1_555 C DA 2 1_555 D DT 27 1_555 -0.142 0.981 3.566 1.798 -2.359 48.646 1.384 0.320 3.511 -2.860 -2.181 48.731 1 LL_DT1DA2:DT27DA28_MM L 1 ? M 28 ? L 2 ? M 27 ? 1 C DA 2 1_555 D DT 27 1_555 C DA 3 1_555 D DT 26 1_555 0.591 0.269 3.084 -0.122 -0.211 36.473 0.458 -0.960 3.081 -0.338 0.196 36.474 2 LL_DA2DA3:DT26DT27_MM L 2 ? M 27 ? L 3 ? M 26 ? 1 C DA 3 1_555 D DT 26 1_555 C DA 4 1_555 D DT 25 1_555 -0.826 -0.446 3.084 -2.429 -0.285 36.097 -0.680 1.005 3.134 -0.459 3.914 36.177 3 LL_DA3DA4:DT25DT26_MM L 3 ? M 26 ? L 4 ? M 25 ? 1 C DA 4 1_555 D DT 25 1_555 C DA 5 1_555 D DT 24 1_555 0.292 -0.648 2.925 -6.358 -2.442 34.607 -0.747 -1.325 2.866 -4.056 10.561 35.250 4 LL_DA4DA5:DT24DT25_MM L 4 ? M 25 ? L 5 ? M 24 ? 1 C DA 5 1_555 D DT 24 1_555 C DT 6 1_555 D DA 23 1_555 -0.472 -0.788 3.467 3.343 -3.546 34.623 -0.742 1.324 3.469 -5.922 -5.583 34.954 5 LL_DA5DT6:DA23DT24_MM L 5 ? M 24 ? L 6 ? M 23 ? 1 C DT 6 1_555 D DA 23 1_555 C DA 7 1_555 D DT 22 1_555 -0.496 -0.320 3.387 0.943 10.637 30.081 -2.557 1.079 3.082 19.729 -1.749 31.879 6 LL_DT6DA7:DT22DA23_MM L 6 ? M 23 ? L 7 ? M 22 ? 1 C DA 7 1_555 D DT 22 1_555 C DG 8 1_555 D DC 21 1_555 0.609 -0.678 3.365 -4.200 10.547 33.995 -2.607 -1.590 2.938 17.446 6.947 35.787 7 LL_DA7DG8:DC21DT22_MM L 7 ? M 22 ? L 8 ? M 21 ? 1 C DG 8 1_555 D DC 21 1_555 C DT 9 1_555 D DA 20 1_555 -0.823 -0.992 3.331 -2.777 -2.964 31.684 -1.243 0.970 3.465 -5.401 5.061 31.937 8 LL_DG8DT9:DA20DC21_MM L 8 ? M 21 ? L 9 ? M 20 ? 1 C DT 9 1_555 D DA 20 1_555 C DT 10 1_555 D DA 19 1_555 0.330 -0.227 3.067 2.254 0.766 31.904 -0.543 -0.215 3.076 1.391 -4.093 31.991 9 LL_DT9DT10:DA19DA20_MM L 9 ? M 20 ? L 10 ? M 19 ? 1 C DT 10 1_555 D DA 19 1_555 C DC 11 1_555 D DG 18 1_555 -0.322 -0.414 3.401 -0.812 2.547 37.499 -0.986 0.391 3.373 3.955 1.261 37.591 10 LL_DT10DC11:DG18DA19_MM L 10 ? M 19 ? L 11 ? M 18 ? 1 C DC 11 1_555 D DG 18 1_555 C DT 12 1_555 D DA 17 1_555 0.282 -0.521 3.143 -1.622 8.660 28.902 -2.650 -0.851 2.851 16.862 3.158 30.187 11 LL_DC11DT12:DA17DG18_MM L 11 ? M 18 ? L 12 ? M 17 ? 1 C DT 12 1_555 D DA 17 1_555 C DC 13 1_555 D DG 16 1_555 1.023 -1.570 3.294 -1.116 3.594 30.008 -3.719 -2.182 3.050 6.908 2.145 30.237 12 LL_DT12DC13:DG16DA17_MM L 12 ? M 17 ? L 13 ? M 16 ? 1 C DC 13 1_555 D DG 16 1_555 C DA 14 1_555 D DT 15 1_555 -0.701 -0.966 3.625 6.431 15.288 35.892 -3.310 1.829 2.839 23.336 -9.816 39.424 13 LL_DC13DA14:DT15DG16_MM L 13 ? M 16 ? L 14 ? M 15 ? 1 C DA 14 1_555 D DT 15 1_555 C DC 15 1_555 D DG 14 1_555 0.317 -0.817 3.080 -2.766 2.003 25.038 -2.408 -1.471 2.954 4.593 6.343 25.267 14 LL_DA14DC15:DG14DT15_MM L 14 ? M 15 ? L 15 ? M 14 ? 1 C DC 15 1_555 D DG 14 1_555 C DG 16 1_555 D DC 13 1_555 0.343 -0.926 3.549 -4.747 13.360 35.787 -3.130 -1.133 2.963 20.765 7.378 38.408 15 LL_DC15DG16:DC13DG14_MM L 15 ? M 14 ? L 16 ? M 13 ? 1 C DG 16 1_555 D DC 13 1_555 C DA 17 1_555 D DT 12 1_555 -0.851 -1.589 3.223 0.414 3.632 29.935 -3.761 1.717 3.002 6.999 -0.797 30.152 16 LL_DG16DA17:DT12DC13_MM L 16 ? M 13 ? L 17 ? M 12 ? 1 C DA 17 1_555 D DT 12 1_555 C DT 18 1_555 D DA 11 1_555 -0.198 -0.881 2.894 1.198 6.529 29.863 -2.778 0.578 2.637 12.475 -2.289 30.575 17 LL_DA17DT18:DA11DT12_MM L 17 ? M 12 ? L 18 ? M 11 ? 1 C DT 18 1_555 D DA 11 1_555 C DA 19 1_555 D DT 10 1_555 0.300 -0.169 3.713 2.530 3.335 36.122 -0.799 -0.079 3.695 5.356 -4.063 36.355 18 LL_DT18DA19:DT10DA11_MM L 18 ? M 11 ? L 19 ? M 10 ? 1 C DA 19 1_555 D DT 10 1_555 C DA 20 1_555 D DT 9 1_555 -0.354 -0.248 2.979 -2.752 0.215 33.481 -0.461 0.201 2.996 0.372 4.766 33.591 19 LL_DA19DA20:DT9DT10_MM L 19 ? M 10 ? L 20 ? M 9 ? 1 C DA 20 1_555 D DT 9 1_555 C DC 21 1_555 D DG 8 1_555 0.907 -0.928 3.436 4.208 -1.190 33.494 -1.391 -0.830 3.550 -2.054 -7.263 33.771 20 LL_DA20DC21:DG8DT9_MM L 20 ? M 9 ? L 21 ? M 8 ? 1 C DC 21 1_555 D DG 8 1_555 C DT 22 1_555 D DA 7 1_555 -0.720 -0.710 3.373 1.423 7.763 29.617 -2.876 1.644 3.055 14.856 -2.723 30.628 21 LL_DC21DT22:DA7DG8_MM L 21 ? M 8 ? L 22 ? M 7 ? 1 C DT 22 1_555 D DA 7 1_555 C DA 23 1_555 D DT 6 1_555 0.639 -0.545 3.400 0.101 10.022 33.655 -2.435 -1.045 3.117 16.851 -0.169 35.075 22 LL_DT22DA23:DT6DA7_MM L 22 ? M 7 ? L 23 ? M 6 ? 1 C DA 23 1_555 D DT 6 1_555 C DT 24 1_555 D DA 5 1_555 0.208 -0.862 3.207 0.939 -0.022 32.020 -1.559 -0.211 3.212 -0.040 -1.703 32.034 23 LL_DA23DT24:DA5DT6_MM L 23 ? M 6 ? L 24 ? M 5 ? 1 C DT 24 1_555 D DA 5 1_555 C DT 25 1_555 D DA 4 1_555 0.843 -1.547 3.074 1.506 -2.718 82.917 -1.105 -0.602 3.127 -2.052 -1.137 82.965 24 LL_DT24DT25:DA4DA5_MM L 24 ? M 5 ? L 25 ? M 4 ? 1 C DT 25 1_555 D DA 4 1_555 C DA 26 1_555 D DT 3 1_555 0.452 1.828 3.260 1.870 -1.349 0.897 77.446 38.191 0.527 -40.221 -55.754 2.474 25 LL_DT25DA26:DT3DA4_MM L 25 ? M 4 ? L 26 ? M 3 ? 1 C DA 26 1_555 D DT 3 1_555 C DA 27 1_555 D DT 2 1_555 -0.961 -0.398 3.322 -2.578 1.792 34.191 -0.962 1.216 3.359 3.039 4.373 34.331 26 LL_DA26DA27:DT2DT3_MM L 26 ? M 3 ? L 27 ? M 2 ? 1 C DA 27 1_555 D DT 2 1_555 C DA 28 1_555 D DT 1 1_555 0.820 1.275 3.162 -0.924 -7.238 41.176 2.495 -1.240 2.889 -10.195 1.301 41.790 27 LL_DA27DA28:DT1DT2_MM L 27 ? M 2 ? L 28 ? M 1 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Japan Society for the Promotion of Science (JSPS)' Japan JP26220807 1 'Japan Society for the Promotion of Science (JSPS)' Japan JP18H02396 2 'Japan Society for the Promotion of Science (JSPS)' Japan JP18K05321 3 # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details 1 ? 'experimental model' PDB 7DVS '7DVS, 4LLN' 2 ? 'experimental model' PDB 4LLN '7DVS, 4LLN' # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details Dimer #