HEADER    OXIDOREDUCTASE                          23-JAN-21   7DYX              
TITLE     HUMAN JMJD5 IN COMPLEX WITH MN AND 5-((2-CYCLOPROPYLBENZYL)AMINO)     
TITLE    2 PYRIDINE-2,4-DICARBOXYLIC ACID.                                      
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: BIFUNCTIONAL PEPTIDASE AND ARGINYL-HYDROXYLASE JMJD5;      
COMPND   3 CHAIN: A;                                                            
COMPND   4 SYNONYM: JMJC DOMAIN-CONTAINING PROTEIN 5,JUMONJI C DOMAIN-CONTAINING
COMPND   5 PROTEIN 5,L-ARGININE (3R)-HYDROXYLASE KDM8;                          
COMPND   6 EC: 1.14.11.-,3.4.-.-;                                               
COMPND   7 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: KDM8, JMJD5;                                                   
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);                       
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 469008                                      
KEYWDS    JMJC DOMAIN-CONTAINING PROTEIN 5, JMJD5, DIOXYGENASE, OXIDOREDUCTASE  
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    Y.NAKASHIMA,L.BREWITZ,C.J.SCHOFIELD                                   
REVDAT   4   06-DEC-23 7DYX    1       JRNL                                     
REVDAT   3   29-NOV-23 7DYX    1       REMARK                                   
REVDAT   2   16-AUG-23 7DYX    1       JRNL                                     
REVDAT   1   02-FEB-22 7DYX    0                                                
JRNL        AUTH   L.BREWITZ,Y.NAKASHIMA,S.K.PIASECKA,E.SALAH,S.C.FLETCHER,     
JRNL        AUTH 2 A.TUMBER,T.P.CORNER,T.J.KENNEDY,G.FIORINI,A.THALHAMMER,      
JRNL        AUTH 3 K.E.CHRISTENSEN,M.L.COLEMAN,C.J.SCHOFIELD                    
JRNL        TITL   5-SUBSTITUTED PYRIDINE-2,4-DICARBOXYLATE DERIVATIVES HAVE    
JRNL        TITL 2 POTENTIAL FOR SELECTIVE INHIBITION OF HUMAN JUMONJI-C        
JRNL        TITL 3 DOMAIN-CONTAINING PROTEIN 5.                                 
JRNL        REF    J.MED.CHEM.                   V.  66 10849 2023              
JRNL        REFN                   ISSN 0022-2623                               
JRNL        PMID   37527664                                                     
JRNL        DOI    10.1021/ACS.JMEDCHEM.3C01114                                 
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.27 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX 1.17.1_3660                                   
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2           
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.27                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 41.54                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 0.970                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 97.1                           
REMARK   3   NUMBER OF REFLECTIONS             : 21662                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.244                           
REMARK   3   R VALUE            (WORKING SET) : 0.242                           
REMARK   3   FREE R VALUE                     : 0.280                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 4.920                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1066                            
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 41.5400 -  4.5400    0.96     2541   132  0.2062 0.2503        
REMARK   3     2  4.5400 -  3.6000    0.98     2617   130  0.1733 0.2550        
REMARK   3     3  3.6000 -  3.1500    0.98     2611   138  0.2298 0.2325        
REMARK   3     4  3.1500 -  2.8600    0.94     2502   128  0.2816 0.3308        
REMARK   3     5  2.8600 -  2.6500    0.96     2541   135  0.3112 0.3251        
REMARK   3     6  2.6500 -  2.5000    0.98     2592   133  0.3317 0.3397        
REMARK   3     7  2.5000 -  2.3700    0.98     2602   136  0.3472 0.3802        
REMARK   3     8  2.3700 -  2.2700    0.98     2590   134  0.3394 0.3244        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : FLAT BULK SOLVENT MODEL                       
REMARK   3   SOLVENT RADIUS     : 1.11                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : NULL                                          
REMARK   3   B_SOL              : NULL                                          
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.356            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.117           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 38.22                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 48.82                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.004           2106                                  
REMARK   3   ANGLE     :  0.583           2895                                  
REMARK   3   CHIRALITY :  0.047            300                                  
REMARK   3   PLANARITY :  0.003            384                                  
REMARK   3   DIHEDRAL  : 14.695            776                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : 2                                          
REMARK   3   TLS GROUP : 1                                                      
REMARK   3    SELECTION: CHAIN 'A' AND (RESID 182 THROUGH 248 )                 
REMARK   3    ORIGIN FOR THE GROUP (A): -13.1148  14.8209 -15.0764              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.2689 T22:   0.2617                                     
REMARK   3      T33:   0.3256 T12:   0.0032                                     
REMARK   3      T13:   0.0487 T23:  -0.0317                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   3.3000 L22:   2.9561                                     
REMARK   3      L33:   2.0664 L12:  -0.7612                                     
REMARK   3      L13:   1.6436 L23:  -1.5885                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:  -0.3794 S12:  -0.2296 S13:   0.3693                       
REMARK   3      S21:   0.2442 S22:   0.1627 S23:   0.1196                       
REMARK   3      S31:  -0.2652 S32:  -0.2525 S33:   0.0929                       
REMARK   3   TLS GROUP : 2                                                      
REMARK   3    SELECTION: CHAIN 'A' AND (RESID 249 THROUGH 416 )                 
REMARK   3    ORIGIN FOR THE GROUP (A):  -8.0713  12.9961 -23.0646              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.2153 T22:   0.1948                                     
REMARK   3      T33:   0.3645 T12:   0.0280                                     
REMARK   3      T13:   0.0348 T23:  -0.0293                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   1.1004 L22:   1.7579                                     
REMARK   3      L33:   2.6316 L12:   0.3019                                     
REMARK   3      L13:   0.4631 L23:  -0.8910                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:  -0.0047 S12:   0.0254 S13:  -0.0839                       
REMARK   3      S21:   0.0271 S22:  -0.0143 S23:   0.0733                       
REMARK   3      S31:   0.1074 S32:  -0.0070 S33:   0.0179                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 7DYX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-JAN-21.                  
REMARK 100 THE DEPOSITION ID IS D_1300020473.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 03-NOV-20                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 7.5                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : ESRF                               
REMARK 200  BEAMLINE                       : MASSIF-1                           
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.965459                           
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : PIXEL                              
REMARK 200  DETECTOR MANUFACTURER          : DECTRIS PILATUS3 2M                
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : XDS                                
REMARK 200  DATA SCALING SOFTWARE          : POINTLESS                          
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 21676                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.270                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 48.920                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 97.1                               
REMARK 200  DATA REDUNDANCY                : 2.320                              
REMARK 200  R MERGE                    (I) : 0.43500                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 2.6900                             
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.27                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.41                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 98.2                               
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : 2.96600                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 0.350                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: PHASER                                                
REMARK 200 STARTING MODEL: 6F4P                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 46.16                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM HEPES SODIUM, 200MM MAGNESIUM      
REMARK 280  CHLORIDE HEXAHYDRATE, 25% W/V PEG 3350, 1MM MANGANESE CHLORIDE,     
REMARK 280  PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K             
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21                       
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X+1/2,-Y,Z+1/2                                         
REMARK 290       3555   -X,Y+1/2,-Z+1/2                                         
REMARK 290       4555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000       24.46000            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       39.32450            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       32.37500            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000       39.32450            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000       24.46000            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000       32.37500            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 120 ANGSTROM**2                           
REMARK 350 SURFACE AREA OF THE COMPLEX: 11430 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     TYR A   243                                                      
REMARK 465     THR A   244                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     ARG A 196    CZ   NH1  NH2                                       
REMARK 470     GLN A 219    CD   OE1  NE2                                       
REMARK 470     SER A 241    OG                                                  
REMARK 470     GLU A 246    CG   CD   OE1  OE2                                  
REMARK 470     GLU A 247    CG   CD   OE1  OE2                                  
REMARK 470     ASN A 265    CG   OD1  ND2                                       
REMARK 470     GLU A 284    CD   OE1  OE2                                       
REMARK 470     LYS A 286    NZ                                                  
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   O    HOH A   631     O    HOH A   640              2.03            
REMARK 500   O    HOH A   609     O    HOH A   654              2.05            
REMARK 500   OE2  GLU A   224     O    HOH A   601              2.05            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    PHE A 199      -54.23   -137.24                                   
REMARK 500    VAL A 211      -64.92   -105.80                                   
REMARK 500    GLU A 246     -131.97   -111.29                                   
REMARK 500    GLU A 247      133.38   -170.97                                   
REMARK 500    TYR A 262       -0.59   -142.74                                   
REMARK 500    TYR A 262       -1.81   -142.74                                   
REMARK 500    ILE A 263      -51.84   -129.01                                   
REMARK 500    ILE A 263      -56.50   -125.09                                   
REMARK 500    GLU A 266       70.19     26.37                                   
REMARK 500    TYR A 350       70.65     48.11                                   
REMARK 500    ASN A 367       62.17   -164.22                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MN A 501  MN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 HIS A 321   NE2                                                    
REMARK 620 2 ASP A 323   OD2 117.2                                              
REMARK 620 3 HIS A 400   NE2  86.5  89.3                                        
REMARK 620 4 HRR A 502   O3  157.4  80.7  79.8                                  
REMARK 620 5 HRR A 502   N23  90.2 149.4 106.7  76.9                            
REMARK 620 6 HOH A 615   O    88.8  83.2 168.2 107.8  84.2                      
REMARK 620 N                    1     2     3     4     5                       
DBREF  7DYX A  183   416  UNP    Q8N371   KDM8_HUMAN     183    416             
SEQADV 7DYX SER A  182  UNP  Q8N371              EXPRESSION TAG                 
SEQRES   1 A  235  SER THR VAL PRO ARG LEU HIS ARG PRO SER LEU GLN HIS          
SEQRES   2 A  235  PHE ARG GLU GLN PHE LEU VAL PRO GLY ARG PRO VAL ILE          
SEQRES   3 A  235  LEU LYS GLY VAL ALA ASP HIS TRP PRO CYS MET GLN LYS          
SEQRES   4 A  235  TRP SER LEU GLU TYR ILE GLN GLU ILE ALA GLY CYS ARG          
SEQRES   5 A  235  THR VAL PRO VAL GLU VAL GLY SER ARG TYR THR ASP GLU          
SEQRES   6 A  235  GLU TRP SER GLN THR LEU MET THR VAL ASN GLU PHE ILE          
SEQRES   7 A  235  SER LYS TYR ILE VAL ASN GLU PRO ARG ASP VAL GLY TYR          
SEQRES   8 A  235  LEU ALA GLN HIS GLN LEU PHE ASP GLN ILE PRO GLU LEU          
SEQRES   9 A  235  LYS GLN ASP ILE SER ILE PRO ASP TYR CYS SER LEU GLY          
SEQRES  10 A  235  ASP GLY GLU GLU GLU GLU ILE THR ILE ASN ALA TRP PHE          
SEQRES  11 A  235  GLY PRO GLN GLY THR ILE SER PRO LEU HIS GLN ASP PRO          
SEQRES  12 A  235  GLN GLN ASN PHE LEU VAL GLN VAL MET GLY ARG LYS TYR          
SEQRES  13 A  235  ILE ARG LEU TYR SER PRO GLN GLU SER GLY ALA LEU TYR          
SEQRES  14 A  235  PRO HIS ASP THR HIS LEU LEU HIS ASN THR SER GLN VAL          
SEQRES  15 A  235  ASP VAL GLU ASN PRO ASP LEU GLU LYS PHE PRO LYS PHE          
SEQRES  16 A  235  ALA LYS ALA PRO PHE LEU SER CYS ILE LEU SER PRO GLY          
SEQRES  17 A  235  GLU ILE LEU PHE ILE PRO VAL LYS TYR TRP HIS TYR VAL          
SEQRES  18 A  235  ARG ALA LEU ASP LEU SER PHE SER VAL SER PHE TRP TRP          
SEQRES  19 A  235  SER                                                          
HET     MN  A 501       1                                                       
HET    HRR  A 502      37                                                       
HETNAM      MN MANGANESE (II) ION                                               
HETNAM     HRR 5-((2-CYCLOPROPYLBENZYL)AMINO)PYRIDINE-2,4-DICARBOXYLIC          
HETNAM   2 HRR  ACID                                                            
FORMUL   2   MN    MN 2+                                                        
FORMUL   3  HRR    C17 H16 N2 O4                                                
FORMUL   4  HOH   *57(H2 O)                                                     
HELIX    1 AA1 SER A  191  PHE A  199  1                                   9    
HELIX    2 AA2 PRO A  216  TRP A  221  1                                   6    
HELIX    3 AA3 SER A  222  GLY A  231  1                                  10    
HELIX    4 AA4 VAL A  255  ILE A  263  1                                   9    
HELIX    5 AA5 GLN A  277  ILE A  282  1                                   6    
HELIX    6 AA6 ILE A  282  GLN A  287  1                                   6    
HELIX    7 AA7 PRO A  292  GLY A  298  5                                   7    
HELIX    8 AA8 GLU A  301  ILE A  305  5                                   5    
HELIX    9 AA9 SER A  342  TYR A  350  5                                   9    
HELIX   10 AB1 THR A  354  HIS A  358  5                                   5    
HELIX   11 AB2 PHE A  373  ALA A  377  5                                   5    
SHEET    1 AA1 9 ARG A 186  HIS A 188  0                                        
SHEET    2 AA1 9 VAL A 206  LYS A 209  1  O  LYS A 209   N  LEU A 187           
SHEET    3 AA1 9 ILE A 391  ILE A 394 -1  O  PHE A 393   N  VAL A 206           
SHEET    4 AA1 9 GLN A 326  MET A 333 -1  N  LEU A 329   O  LEU A 392           
SHEET    5 AA1 9 SER A 408  TRP A 415 -1  O  VAL A 411   N  VAL A 330           
SHEET    6 AA1 9 THR A 306  GLY A 312 -1  N  TRP A 310   O  SER A 410           
SHEET    7 AA1 9 VAL A 270  HIS A 276 -1  N  HIS A 276   O  ALA A 309           
SHEET    8 AA1 9 THR A 234  GLY A 240 -1  N  GLU A 238   O  TYR A 272           
SHEET    9 AA1 9 SER A 249  THR A 254 -1  O  SER A 249   N  VAL A 239           
SHEET    1 AA2 3 LEU A 382  LEU A 386  0                                        
SHEET    2 AA2 3 LYS A 336  TYR A 341 -1  N  LEU A 340   O  LEU A 382           
SHEET    3 AA2 3 TRP A 399  ALA A 404 -1  O  ARG A 403   N  TYR A 337           
LINK         NE2 HIS A 321                MN    MN A 501     1555   1555  2.16  
LINK         OD2 ASP A 323                MN    MN A 501     1555   1555  2.18  
LINK         NE2 HIS A 400                MN    MN A 501     1555   1555  2.16  
LINK        MN    MN A 501                 O3  HRR A 502     1555   1555  2.25  
LINK        MN    MN A 501                 N23 HRR A 502     1555   1555  2.25  
LINK        MN    MN A 501                 O   HOH A 615     1555   1555  1.78  
CRYST1   48.920   64.750   78.649  90.00  90.00  90.00 P 21 21 21    4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.020442  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.015444  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.012715        0.00000