HEADER IMMUNE SYSTEM 25-JAN-21 7DZN TITLE CRYSTAL STRUCTURE OF THE CROSS-RESTRICTED T18A TCR AND HLAB4201 BOUND TITLE 2 TO HIV-1 GAG TL9 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MHC CLASS I ANTIGEN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: BETA-2-MICROGLOBULIN; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: GAG-POL POLYPROTEIN; COMPND 11 CHAIN: C; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: BETA CHAIN T18A TCR; COMPND 15 CHAIN: D; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 5; COMPND 18 MOLECULE: ALPHA CHAIN T18A TCR; COMPND 19 CHAIN: E; COMPND 20 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HLA-B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: B2M, CDABP0092, HDCMA22P; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; SOURCE 19 ORGANISM_TAXID: 11676; SOURCE 20 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 21 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 22 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 23 MOL_ID: 4; SOURCE 24 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 25 ORGANISM_COMMON: HUMAN; SOURCE 26 ORGANISM_TAXID: 9606; SOURCE 27 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 28 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 29 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 30 MOL_ID: 5; SOURCE 31 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 32 ORGANISM_COMMON: HUMAN; SOURCE 33 ORGANISM_TAXID: 9606; SOURCE 34 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 35 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 36 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS TCR AND P-MHC COMPLEX, HIV EPITOPE TL9, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR Y.LIU,L.YIN REVDAT 2 29-NOV-23 7DZN 1 JRNL REVDAT 1 26-JAN-22 7DZN 0 JRNL AUTH Y.LIU,D.SAN,L.YIN JRNL TITL CROSS-REACTIVE TCR WITH ALLOREACTIVITY FOR IMMUNODOMINANT JRNL TITL 2 HIV-1 EPITOPE GAG TL9 WITH ENHANCED CONTROL OF VIRAL JRNL TITL 3 INFECTION JRNL REF BIORXIV 2021 JRNL REFN ISSN 2692-8205 JRNL DOI 10.1101/2021.06.06.447276 REMARK 2 REMARK 2 RESOLUTION. 2.63 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.63 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.70 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 38425 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.7000 - 6.3300 1.00 2855 156 0.1745 0.2102 REMARK 3 2 6.3300 - 5.0300 1.00 2684 148 0.1787 0.2348 REMARK 3 3 5.0300 - 4.3900 1.00 2633 144 0.1548 0.2024 REMARK 3 4 4.3900 - 3.9900 1.00 2633 145 0.1685 0.2017 REMARK 3 5 3.9900 - 3.7000 1.00 2591 142 0.1946 0.2680 REMARK 3 6 3.7000 - 3.4900 1.00 2587 141 0.2254 0.2877 REMARK 3 7 3.4900 - 3.3100 1.00 2586 143 0.2499 0.2801 REMARK 3 8 3.3100 - 3.1700 1.00 2575 141 0.2342 0.2938 REMARK 3 9 3.1700 - 3.0400 1.00 2558 140 0.2419 0.3191 REMARK 3 10 3.0400 - 2.9400 1.00 2548 141 0.2630 0.3187 REMARK 3 11 2.9400 - 2.8500 1.00 2555 140 0.2895 0.3579 REMARK 3 12 2.8500 - 2.7700 1.00 2560 140 0.3033 0.3732 REMARK 3 13 2.7700 - 2.6900 1.00 2531 139 0.2710 0.3179 REMARK 3 14 2.6900 - 2.6300 1.00 2531 138 0.2996 0.4133 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.366 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.070 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 48.47 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 58.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 6869 REMARK 3 ANGLE : 0.675 9347 REMARK 3 CHIRALITY : 0.046 984 REMARK 3 PLANARITY : 0.005 1239 REMARK 3 DIHEDRAL : 5.481 925 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 45.6793 4.7105 4.8317 REMARK 3 T TENSOR REMARK 3 T11: 0.2732 T22: 0.3004 REMARK 3 T33: 0.3462 T12: 0.0109 REMARK 3 T13: -0.0180 T23: -0.0271 REMARK 3 L TENSOR REMARK 3 L11: 0.1095 L22: 0.2852 REMARK 3 L33: 0.9147 L12: -0.0698 REMARK 3 L13: -0.0466 L23: 0.3517 REMARK 3 S TENSOR REMARK 3 S11: -0.0074 S12: -0.0429 S13: -0.0026 REMARK 3 S21: 0.0202 S22: 0.0585 S23: -0.0368 REMARK 3 S31: 0.0410 S32: 0.0881 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7DZN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-JAN-21. REMARK 100 THE DEPOSITION ID IS D_1300020492. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-NOV-20 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9790 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38478 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.628 REMARK 200 RESOLUTION RANGE LOW (A) : 47.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.03554 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.7600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.63 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.72 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.29920 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4U1J, 4GG6, 4UDT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SPG PH 7.0, 25 % W/V PEG 1500, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 131.91950 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 48.49600 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 48.49600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 197.87925 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 48.49600 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 48.49600 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 65.95975 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 48.49600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.49600 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 197.87925 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 48.49600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.49600 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 65.95975 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 131.91950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 MET D 0 REMARK 465 GLY D 1 REMARK 465 ASP D 2 REMARK 465 MET E 1 REMARK 465 GLY E 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 335 O HOH A 338 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS B 48 O SER E 151 3544 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 4 108.22 67.84 REMARK 500 ARG A 19 26.23 -159.48 REMARK 500 ASP A 31 -113.90 53.30 REMARK 500 ASN A 116 93.79 -161.75 REMARK 500 SER A 197 -110.54 -144.80 REMARK 500 ASP A 222 -63.01 62.87 REMARK 500 ARG A 241 -6.61 81.75 REMARK 500 GLU A 255 51.99 -147.05 REMARK 500 PRO B 32 -168.00 -77.72 REMARK 500 LYS B 48 60.65 61.39 REMARK 500 THR B 73 -163.62 -112.05 REMARK 500 LEU D 44 106.82 164.05 REMARK 500 ARG D 65 -9.38 76.50 REMARK 500 ALA D 73 2.66 -68.99 REMARK 500 ALA D 89 -179.76 -176.50 REMARK 500 PRO D 151 -158.35 -78.43 REMARK 500 ALA D 242 35.71 -81.43 REMARK 500 LYS E 54 -42.88 -142.18 REMARK 500 ARG E 70 14.69 56.67 REMARK 500 SER E 131 78.19 54.43 REMARK 500 ALA E 188 27.81 -71.10 REMARK 500 ASN E 189 -75.09 -116.71 REMARK 500 ASN E 193 55.98 -106.15 REMARK 500 ASP E 199 35.68 -89.14 REMARK 500 PRO E 203 -154.95 -79.69 REMARK 500 REMARK 500 REMARK: NULL DBREF 7DZN A 3 279 UNP V6E0U6 V6E0U6_HUMAN 25 301 DBREF 7DZN B 1 99 UNP P61769 B2MG_HUMAN 21 119 DBREF 7DZN C 1 9 UNP P03367 POL_HV1BR 180 188 DBREF 7DZN D 0 243 PDB 7DZN 7DZN 0 243 DBREF 7DZN E 1 204 PDB 7DZN 7DZN 1 204 SEQADV 7DZN MET A 1 UNP V6E0U6 EXPRESSION TAG SEQADV 7DZN GLY A 2 UNP V6E0U6 EXPRESSION TAG SEQADV 7DZN MET B 0 UNP P61769 EXPRESSION TAG SEQRES 1 A 279 MET GLY GLY SER HIS SER MET ARG TYR PHE TYR THR SER SEQRES 2 A 279 VAL SER ARG PRO GLY ARG GLY GLU PRO ARG PHE ILE SER SEQRES 3 A 279 VAL GLY TYR VAL ASP ASP THR GLN PHE VAL ARG PHE ASP SEQRES 4 A 279 SER ASP ALA ALA SER PRO ARG GLU GLU PRO ARG ALA PRO SEQRES 5 A 279 TRP ILE GLU GLN GLU GLY PRO GLU TYR TRP ASP ARG ASN SEQRES 6 A 279 THR GLN ILE TYR LYS ALA GLN ALA GLN THR ASP ARG GLU SEQRES 7 A 279 SER LEU ARG ASN LEU ARG GLY TYR TYR ASN GLN SER GLU SEQRES 8 A 279 ALA GLY SER HIS THR LEU GLN SER MET TYR GLY CYS ASP SEQRES 9 A 279 VAL GLY PRO ASP GLY ARG LEU LEU ARG GLY HIS ASN GLN SEQRES 10 A 279 TYR ALA TYR ASP GLY LYS ASP TYR ILE ALA LEU ASN GLU SEQRES 11 A 279 ASP LEU ARG SER TRP THR ALA ALA ASP THR ALA ALA GLN SEQRES 12 A 279 ILE THR GLN ARG LYS TRP GLU ALA ALA ARG VAL ALA GLU SEQRES 13 A 279 GLN ASP ARG ALA TYR LEU GLU GLY THR CYS VAL GLU TRP SEQRES 14 A 279 LEU ARG ARG TYR LEU GLU ASN GLY LYS ASP THR LEU GLU SEQRES 15 A 279 ARG ALA ASP PRO PRO LYS THR HIS VAL THR HIS HIS PRO SEQRES 16 A 279 ILE SER ASP HIS GLU ALA THR LEU ARG CYS TRP ALA LEU SEQRES 17 A 279 GLY PHE TYR PRO ALA GLU ILE THR LEU THR TRP GLN ARG SEQRES 18 A 279 ASP GLY GLU ASP GLN THR GLN ASP THR GLU LEU VAL GLU SEQRES 19 A 279 THR ARG PRO ALA GLY ASP ARG THR PHE GLN LYS TRP ALA SEQRES 20 A 279 ALA VAL VAL VAL PRO SER GLY GLU GLU GLN ARG TYR THR SEQRES 21 A 279 CYS HIS VAL GLN HIS GLU GLY LEU PRO LYS PRO LEU THR SEQRES 22 A 279 LEU ARG TRP GLU PRO SER SEQRES 1 B 100 MET ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG SEQRES 2 B 100 HIS PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS SEQRES 3 B 100 TYR VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP SEQRES 4 B 100 LEU LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SEQRES 5 B 100 SER ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR LEU SEQRES 6 B 100 LEU TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP GLU SEQRES 7 B 100 TYR ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO SEQRES 8 B 100 LYS ILE VAL LYS TRP ASP ARG ASP MET SEQRES 1 C 9 THR PRO GLN ASP LEU ASN THR MET LEU SEQRES 1 D 244 MET GLY ASP ALA GLY VAL ILE GLN SER PRO ARG HIS GLU SEQRES 2 D 244 VAL THR GLU MET GLY GLN GLU VAL THR LEU ARG CYS LYS SEQRES 3 D 244 PRO ILE SER GLY HIS ASN SER LEU PHE TRP TYR ARG GLN SEQRES 4 D 244 THR MET MET ARG GLY LEU GLU LEU LEU ILE TYR PHE ASN SEQRES 5 D 244 ASN ASN VAL PRO ILE ASP ASP SER GLY MET PRO GLU ASP SEQRES 6 D 244 ARG PHE SER ALA LYS MET PRO ASN ALA SER PHE SER THR SEQRES 7 D 244 LEU LYS ILE GLN PRO SER GLU PRO ARG ASP SER ALA VAL SEQRES 8 D 244 TYR PHE CYS ALA SER SER LEU GLY ILE ASP ALA ILE TYR SEQRES 9 D 244 PHE GLY GLU GLY SER TRP LEU THR VAL VAL GLU ASP LEU SEQRES 10 D 244 LYS ASN VAL PHE PRO PRO GLU VAL ALA VAL PHE GLU PRO SEQRES 11 D 244 SER GLU ALA GLU ILE SER HIS THR GLN LYS ALA THR LEU SEQRES 12 D 244 VAL CYS LEU ALA THR GLY PHE TYR PRO ASP HIS VAL GLU SEQRES 13 D 244 LEU SER TRP TRP VAL ASN GLY LYS GLU VAL HIS SER GLY SEQRES 14 D 244 VAL CYS THR ASP PRO GLN PRO LEU LYS GLU GLN PRO ALA SEQRES 15 D 244 LEU ASN ASP SER ARG TYR ALA LEU SER SER ARG LEU ARG SEQRES 16 D 244 VAL SER ALA THR PHE TRP GLN ASN PRO ARG ASN HIS PHE SEQRES 17 D 244 ARG CYS GLN VAL GLN PHE TYR GLY LEU SER GLU ASN ASP SEQRES 18 D 244 GLU TRP THR GLN ASP ARG ALA LYS PRO VAL THR GLN ILE SEQRES 19 D 244 VAL SER ALA GLU ALA TRP GLY ARG ALA ASP SEQRES 1 E 204 MET GLY ASP ALA LYS THR THR GLN PRO PRO SER MET ASP SEQRES 2 E 204 CYS ALA GLU GLY ARG ALA ALA ASN LEU PRO CYS ASN HIS SEQRES 3 E 204 SER THR ILE SER GLY ASN GLU TYR VAL TYR TRP TYR ARG SEQRES 4 E 204 GLN ILE HIS SER GLN GLY PRO GLN TYR ILE ILE HIS GLY SEQRES 5 E 204 LEU LYS ASN ASN GLU THR ASN GLU MET ALA SER LEU ILE SEQRES 6 E 204 ILE THR GLU ASP ARG LYS SER SER THR LEU ILE LEU PRO SEQRES 7 E 204 HIS ALA THR LEU ARG ASP THR ALA VAL TYR TYR CYS ILE SEQRES 8 E 204 VAL ARG GLY LEU ASN ASN ALA GLY ASN MET LEU THR PHE SEQRES 9 E 204 GLY GLY GLY THR ARG LEU MET VAL LYS PRO ASP ILE GLN SEQRES 10 E 204 ASN PRO ASP PRO ALA VAL TYR GLN LEU ARG ASP SER LYS SEQRES 11 E 204 SER SER ASP LYS SER VAL CYS LEU PHE THR ASP PHE ASP SEQRES 12 E 204 SER GLN THR ASN VAL SER GLN SER LYS ASP SER ASP VAL SEQRES 13 E 204 TYR ILE THR ASP LYS CYS VAL LEU ASP MET ARG SER MET SEQRES 14 E 204 ASP PHE LYS SER ASN SER ALA VAL ALA TRP SER ASN LYS SEQRES 15 E 204 SER ASP PHE ALA CYS ALA ASN ALA PHE ASN ASN SER ILE SEQRES 16 E 204 ILE PRO GLU ASP THR PHE PHE PRO SER FORMUL 6 HOH *116(H2 O) HELIX 1 AA1 ALA A 51 GLU A 55 5 5 HELIX 2 AA2 GLY A 58 ASN A 88 1 31 HELIX 3 AA3 ASP A 139 ALA A 152 1 14 HELIX 4 AA4 ARG A 153 GLY A 164 1 12 HELIX 5 AA5 GLY A 164 GLY A 177 1 14 HELIX 6 AA6 GLY A 177 GLU A 182 1 6 HELIX 7 AA7 GLU D 84 SER D 88 5 5 HELIX 8 AA8 ASP D 115 VAL D 119 5 5 HELIX 9 AA9 SER D 130 GLN D 138 1 9 HELIX 10 AB1 ALA D 197 ASN D 202 1 6 HELIX 11 AB2 THR E 81 THR E 85 5 5 HELIX 12 AB3 ASN E 96 ASN E 100 5 5 HELIX 13 AB4 ALA E 186 PHE E 191 1 6 SHEET 1 AA1 8 GLU A 48 PRO A 49 0 SHEET 2 AA1 8 THR A 33 ASP A 39 -1 N ARG A 37 O GLU A 48 SHEET 3 AA1 8 ARG A 23 VAL A 30 -1 N VAL A 30 O THR A 33 SHEET 4 AA1 8 HIS A 5 VAL A 14 -1 N ARG A 8 O TYR A 29 SHEET 5 AA1 8 THR A 96 VAL A 105 -1 O TYR A 101 N TYR A 9 SHEET 6 AA1 8 LEU A 111 TYR A 120 -1 O LEU A 112 N ASP A 104 SHEET 7 AA1 8 LYS A 123 LEU A 128 -1 O LYS A 123 N TYR A 120 SHEET 8 AA1 8 TRP A 135 ALA A 137 -1 O THR A 136 N ALA A 127 SHEET 1 AA2 4 LYS A 188 PRO A 195 0 SHEET 2 AA2 4 GLU A 200 PHE A 210 -1 O TRP A 206 N HIS A 190 SHEET 3 AA2 4 PHE A 243 PRO A 252 -1 O ALA A 247 N CYS A 205 SHEET 4 AA2 4 THR A 230 LEU A 232 -1 N GLU A 231 O ALA A 248 SHEET 1 AA3 4 LYS A 188 PRO A 195 0 SHEET 2 AA3 4 GLU A 200 PHE A 210 -1 O TRP A 206 N HIS A 190 SHEET 3 AA3 4 PHE A 243 PRO A 252 -1 O ALA A 247 N CYS A 205 SHEET 4 AA3 4 ARG A 236 PRO A 237 -1 N ARG A 236 O GLN A 244 SHEET 1 AA4 4 GLU A 224 ASP A 225 0 SHEET 2 AA4 4 ILE A 215 ARG A 221 -1 O ARG A 221 N GLU A 224 SHEET 3 AA4 4 TYR A 259 HIS A 265 -1 O HIS A 262 N THR A 218 SHEET 4 AA4 4 LEU A 272 ARG A 275 -1 O LEU A 274 N CYS A 261 SHEET 1 AA5 4 LYS B 6 SER B 11 0 SHEET 2 AA5 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 AA5 4 PHE B 62 PHE B 70 -1 O TYR B 66 N CYS B 25 SHEET 4 AA5 4 GLU B 50 HIS B 51 -1 N GLU B 50 O TYR B 67 SHEET 1 AA6 4 LYS B 6 SER B 11 0 SHEET 2 AA6 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 AA6 4 PHE B 62 PHE B 70 -1 O TYR B 66 N CYS B 25 SHEET 4 AA6 4 SER B 55 PHE B 56 -1 N SER B 55 O TYR B 63 SHEET 1 AA7 4 GLU B 44 ARG B 45 0 SHEET 2 AA7 4 ILE B 35 LYS B 41 -1 N LYS B 41 O GLU B 44 SHEET 3 AA7 4 TYR B 78 HIS B 84 -1 O ALA B 79 N LEU B 40 SHEET 4 AA7 4 LYS B 91 LYS B 94 -1 O LYS B 91 N VAL B 82 SHEET 1 AA8 4 ILE D 6 SER D 8 0 SHEET 2 AA8 4 VAL D 20 LYS D 25 -1 O ARG D 23 N SER D 8 SHEET 3 AA8 4 PHE D 75 ILE D 80 -1 O LEU D 78 N LEU D 22 SHEET 4 AA8 4 PHE D 66 ASN D 72 -1 N SER D 67 O LYS D 79 SHEET 1 AA9 6 HIS D 11 GLU D 15 0 SHEET 2 AA9 6 SER D 108 VAL D 113 1 O THR D 111 N GLU D 12 SHEET 3 AA9 6 ALA D 89 SER D 96 -1 N TYR D 91 O SER D 108 SHEET 4 AA9 6 SER D 32 GLN D 38 -1 N TYR D 36 O PHE D 92 SHEET 5 AA9 6 GLU D 45 ASN D 51 -1 O LEU D 47 N TRP D 35 SHEET 6 AA9 6 VAL D 54 ASP D 57 -1 O ILE D 56 N TYR D 49 SHEET 1 AB1 4 HIS D 11 GLU D 15 0 SHEET 2 AB1 4 SER D 108 VAL D 113 1 O THR D 111 N GLU D 12 SHEET 3 AB1 4 ALA D 89 SER D 96 -1 N TYR D 91 O SER D 108 SHEET 4 AB1 4 TYR D 103 PHE D 104 -1 O TYR D 103 N SER D 95 SHEET 1 AB2 4 GLU D 123 PHE D 127 0 SHEET 2 AB2 4 LYS D 139 PHE D 149 -1 O VAL D 143 N PHE D 127 SHEET 3 AB2 4 TYR D 187 SER D 196 -1 O TYR D 187 N PHE D 149 SHEET 4 AB2 4 VAL D 169 THR D 171 -1 N CYS D 170 O ARG D 192 SHEET 1 AB3 4 GLU D 123 PHE D 127 0 SHEET 2 AB3 4 LYS D 139 PHE D 149 -1 O VAL D 143 N PHE D 127 SHEET 3 AB3 4 TYR D 187 SER D 196 -1 O TYR D 187 N PHE D 149 SHEET 4 AB3 4 LEU D 176 LYS D 177 -1 N LEU D 176 O ALA D 188 SHEET 1 AB4 4 LYS D 163 VAL D 165 0 SHEET 2 AB4 4 VAL D 154 VAL D 160 -1 N TRP D 158 O VAL D 165 SHEET 3 AB4 4 HIS D 206 PHE D 213 -1 O GLN D 212 N GLU D 155 SHEET 4 AB4 4 GLN D 232 TRP D 239 -1 O GLN D 232 N PHE D 213 SHEET 1 AB5 5 SER E 11 ALA E 15 0 SHEET 2 AB5 5 THR E 108 LYS E 113 1 O LYS E 113 N CYS E 14 SHEET 3 AB5 5 ALA E 86 ARG E 93 -1 N ALA E 86 O LEU E 110 SHEET 4 AB5 5 TYR E 34 GLN E 40 -1 N TYR E 36 O ILE E 91 SHEET 5 AB5 5 GLN E 47 GLY E 52 -1 O GLN E 47 N ARG E 39 SHEET 1 AB6 4 ALA E 20 ASN E 25 0 SHEET 2 AB6 4 SER E 72 LEU E 77 -1 O LEU E 75 N LEU E 22 SHEET 3 AB6 4 SER E 63 ILE E 66 -1 N SER E 63 O ILE E 76 SHEET 4 AB6 4 GLU E 57 THR E 58 -1 N GLU E 57 O LEU E 64 SHEET 1 AB7 4 ALA E 122 ARG E 127 0 SHEET 2 AB7 4 SER E 135 THR E 140 -1 O VAL E 136 N LEU E 126 SHEET 3 AB7 4 PHE E 171 SER E 180 -1 O ALA E 178 N CYS E 137 SHEET 4 AB7 4 VAL E 156 ILE E 158 -1 N TYR E 157 O TRP E 179 SHEET 1 AB8 4 ALA E 122 ARG E 127 0 SHEET 2 AB8 4 SER E 135 THR E 140 -1 O VAL E 136 N LEU E 126 SHEET 3 AB8 4 PHE E 171 SER E 180 -1 O ALA E 178 N CYS E 137 SHEET 4 AB8 4 CYS E 162 MET E 166 -1 N LEU E 164 O SER E 173 SSBOND 1 CYS A 103 CYS A 166 1555 1555 2.04 SSBOND 2 CYS A 205 CYS A 261 1555 1555 2.03 SSBOND 3 CYS B 25 CYS B 80 1555 1555 2.03 SSBOND 4 CYS D 24 CYS D 93 1555 1555 2.03 SSBOND 5 CYS D 144 CYS D 209 1555 1555 2.03 SSBOND 6 CYS D 170 CYS E 162 1555 1555 2.03 SSBOND 7 CYS E 24 CYS E 90 1555 1555 2.04 SSBOND 8 CYS E 137 CYS E 187 1555 1555 2.03 CISPEP 1 TYR A 211 PRO A 212 0 1.90 CISPEP 2 HIS B 31 PRO B 32 0 3.77 CISPEP 3 SER D 8 PRO D 9 0 -3.79 CISPEP 4 GLN D 81 PRO D 82 0 -3.38 CISPEP 5 TYR D 150 PRO D 151 0 -2.46 CRYST1 96.992 96.992 263.839 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010310 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010310 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003790 0.00000