HEADER MEMBRANE PROTEIN 25-JAN-21 7DZQ OBSLTE 22-SEP-21 7DZQ 7V6Y TITLE CRYO-EM STRUCTURE OF PATCHED IN LIPID NANODISC - THE WILDTYPE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN PATCHED HOMOLOG 1,PROTEIN PATCHED HOMOLOG 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PTC,PTC1,PTC,PTC1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: PTCH1, PTCH; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK EXPI93 KEYWDS CAVEOLAE, HEDGEHOG SIGNALING, LIPID NANODISC, PATCHED, PTC1 DIMER, KEYWDS 2 MEMBRANE PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR Y.LUO,X.ZHANG,G.WAN,Q.WANG,Y.ZHAO,Y.CONG,Q.QU,D.LI REVDAT 3 22-SEP-21 7DZQ 1 OBSLTE REVDAT 2 14-JUL-21 7DZQ 1 JRNL REVDAT 1 30-JUN-21 7DZQ 0 JRNL AUTH Y.LUO,G.WAN,X.ZHANG,X.ZHOU,Q.WANG,J.FAN,H.CAI,L.MA,H.WU, JRNL AUTH 2 Q.QU,Y.CONG,Y.ZHAO,D.LI JRNL TITL CRYO-EM STUDY OF PATCHED IN LIPID NANODISC SUGGESTS A JRNL TITL 2 STRUCTURAL BASIS FOR ITS CLUSTERING IN CAVEOLAE. JRNL REF STRUCTURE 2021 JRNL REFN ISSN 0969-2126 JRNL PMID 34174188 JRNL DOI 10.1016/J.STR.2021.06.004 REMARK 2 REMARK 2 RESOLUTION. 3.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : SERIALEM, GCTF, UCSF CHIMERA, RELION, REMARK 3 RELION, RELION, RELION, COOT, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : BACK PROJECTION REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 6MG8 REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : 57.040 REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.600 REMARK 3 NUMBER OF PARTICLES : 107850 REMARK 3 CTF CORRECTION METHOD : NONE REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 7DZQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 29-JAN-21. REMARK 100 THE DEPOSITION ID IS D_1300020075. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : PTC1 IN LIPID NANODISC REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 8.50 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1500.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2200.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 6000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 120000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -1 REMARK 465 GLY A 0 REMARK 465 SER A 1 REMARK 465 ALA A 2 REMARK 465 SER A 3 REMARK 465 ALA A 4 REMARK 465 GLY A 5 REMARK 465 ASN A 6 REMARK 465 ALA A 7 REMARK 465 ALA A 8 REMARK 465 GLY A 9 REMARK 465 ALA A 10 REMARK 465 LEU A 11 REMARK 465 GLY A 12 REMARK 465 ARG A 13 REMARK 465 GLN A 14 REMARK 465 ALA A 15 REMARK 465 GLY A 16 REMARK 465 GLY A 17 REMARK 465 GLY A 18 REMARK 465 ARG A 19 REMARK 465 ARG A 20 REMARK 465 ARG A 21 REMARK 465 ARG A 22 REMARK 465 THR A 23 REMARK 465 GLY A 24 REMARK 465 GLY A 25 REMARK 465 PRO A 26 REMARK 465 HIS A 27 REMARK 465 ARG A 28 REMARK 465 ALA A 29 REMARK 465 ALA A 30 REMARK 465 PRO A 31 REMARK 465 ASP A 32 REMARK 465 ARG A 33 REMARK 465 ASP A 34 REMARK 465 TYR A 35 REMARK 465 LEU A 36 REMARK 465 HIS A 37 REMARK 465 ARG A 38 REMARK 465 PRO A 39 REMARK 465 SER A 40 REMARK 465 TYR A 41 REMARK 465 CYS A 42 REMARK 465 ASP A 43 REMARK 465 ALA A 44 REMARK 465 ALA A 45 REMARK 465 PHE A 46 REMARK 465 ALA A 47 REMARK 465 LEU A 48 REMARK 465 GLU A 49 REMARK 465 GLN A 50 REMARK 465 ILE A 51 REMARK 465 SER A 52 REMARK 465 LYS A 53 REMARK 465 GLY A 54 REMARK 465 LYS A 55 REMARK 465 ALA A 56 REMARK 465 THR A 57 REMARK 465 GLY A 58 REMARK 465 ARG A 59 REMARK 465 LEU A 195 REMARK 465 ILE A 196 REMARK 465 THR A 197 REMARK 465 GLU A 198 REMARK 465 THR A 199 REMARK 465 GLY A 200 REMARK 465 CYS A 694 REMARK 465 PHE A 695 REMARK 465 THR A 696 REMARK 465 SER A 697 REMARK 465 PRO A 698 REMARK 465 CYS A 699 REMARK 465 VAL A 700 REMARK 465 SER A 701 REMARK 465 ARG A 702 REMARK 465 VAL A 703 REMARK 465 ILE A 704 REMARK 465 GLN A 705 REMARK 465 VAL A 706 REMARK 465 GLU A 707 REMARK 465 PRO A 708 REMARK 465 GLN A 709 REMARK 465 GLU A 710 REMARK 465 PRO A 711 REMARK 465 PRO A 712 REMARK 465 CYS A 713 REMARK 465 THR A 714 REMARK 465 PRO A 1168 REMARK 465 GLU A 1169 REMARK 465 VAL A 1170 REMARK 465 SER A 1171 REMARK 465 PRO A 1172 REMARK 465 ALA A 1173 REMARK 465 ASN A 1174 REMARK 465 GLY A 1175 REMARK 465 THR A 1176 REMARK 465 LEU A 1177 REMARK 465 GLU A 1178 REMARK 465 VAL A 1179 REMARK 465 LEU A 1180 REMARK 465 PHE A 1181 REMARK 465 GLN A 1182 REMARK 465 GLY A 1183 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 60 CG CD CE NZ REMARK 470 ARG A 66 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 73 CG CD1 CD2 REMARK 470 ASN A 83 CG OD1 ND2 REMARK 470 GLU A 112 CG CD OE1 OE2 REMARK 470 GLU A 113 CG CD OE1 OE2 REMARK 470 GLU A 135 CG CD OE1 OE2 REMARK 470 GLU A 136 CG CD OE1 OE2 REMARK 470 MET A 138 CG SD CE REMARK 470 GLU A 150 CG CD OE1 OE2 REMARK 470 GLU A 151 CG CD OE1 OE2 REMARK 470 GLU A 159 CG CD OE1 OE2 REMARK 470 GLU A 194 CG CD OE1 OE2 REMARK 470 ILE A 205 CG1 CG2 CD1 REMARK 470 ILE A 206 CG1 CG2 CD1 REMARK 470 GLU A 207 CG CD OE1 OE2 REMARK 470 ASP A 219 CG OD1 OD2 REMARK 470 GLU A 223 CG CD OE1 OE2 REMARK 470 TYR A 233 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU A 234 CG CD1 CD2 REMARK 470 LEU A 235 CG CD1 CD2 REMARK 470 LYS A 237 CG CD CE NZ REMARK 470 GLU A 252 CG CD OE1 OE2 REMARK 470 LEU A 254 CG CD1 CD2 REMARK 470 LYS A 255 CG CD CE NZ REMARK 470 LYS A 256 CG CD CE NZ REMARK 470 ASN A 258 CG OD1 ND2 REMARK 470 GLN A 260 CG CD OE1 NE2 REMARK 470 VAL A 261 CG1 CG2 REMARK 470 ASP A 262 CG OD1 OD2 REMARK 470 GLU A 265 CG CD OE1 OE2 REMARK 470 GLU A 266 CG CD OE1 OE2 REMARK 470 MET A 267 CG SD CE REMARK 470 ASP A 279 CG OD1 OD2 REMARK 470 ASP A 287 CG OD1 OD2 REMARK 470 ASP A 289 CG OD1 OD2 REMARK 470 THR A 293 OG1 CG2 REMARK 470 SER A 299 OG REMARK 470 THR A 300 OG1 CG2 REMARK 470 LYS A 301 CG CD CE NZ REMARK 470 ASP A 304 CG OD1 OD2 REMARK 470 LYS A 334 CG CD CE NZ REMARK 470 LYS A 339 CG CD CE NZ REMARK 470 SER A 342 OG REMARK 470 GLN A 357 CG CD OE1 NE2 REMARK 470 ASP A 366 CG OD1 OD2 REMARK 470 HIS A 370 CG ND1 CD2 CE1 NE2 REMARK 470 ASP A 376 CG OD1 OD2 REMARK 470 GLU A 383 CG CD OE1 OE2 REMARK 470 GLU A 391 CG CD OE1 OE2 REMARK 470 SER A 396 OG REMARK 470 ASP A 415 CG OD1 OD2 REMARK 470 LYS A 418 CG CD CE NZ REMARK 470 PHE A 420 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP A 422 CG OD1 OD2 REMARK 470 ARG A 445 CG CD NE CZ NH1 NH2 REMARK 470 SER A 449 OG REMARK 470 LYS A 450 CG CD CE NZ REMARK 470 SER A 480 OG REMARK 470 ASP A 499 CG OD1 OD2 REMARK 470 ASP A 500 CG OD1 OD2 REMARK 470 GLU A 510 CG CD OE1 OE2 REMARK 470 GLN A 513 CG CD OE1 NE2 REMARK 470 ASN A 514 CG OD1 ND2 REMARK 470 LYS A 515 CG CD CE NZ REMARK 470 ARG A 516 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 519 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 520 CG CD OE1 OE2 REMARK 470 ASP A 521 CG OD1 OD2 REMARK 470 ARG A 522 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 525 CG CD OE1 OE2 REMARK 470 LYS A 528 CG CD CE NZ REMARK 470 SER A 538 OG REMARK 470 ARG A 589 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 592 CG CD NE CZ NH1 NH2 REMARK 470 CYS A 598 SG REMARK 470 LYS A 715 CG CD CE NZ REMARK 470 TRP A 716 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 716 CZ3 CH2 REMARK 470 THR A 717 OG1 CG2 REMARK 470 LEU A 718 CG CD1 CD2 REMARK 470 SER A 720 OG REMARK 470 PHE A 721 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 723 CG CD OE1 OE2 REMARK 470 LEU A 731 CG CD1 CD2 REMARK 470 LYS A 732 CG CD CE NZ REMARK 470 LYS A 734 CG CD CE NZ REMARK 470 VAL A 737 CG1 CG2 REMARK 470 VAL A 738 CG1 CG2 REMARK 470 ASP A 762 CG OD1 OD2 REMARK 470 ASP A 765 CG OD1 OD2 REMARK 470 ARG A 769 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 807 CG OD1 OD2 REMARK 470 LYS A 810 CG CD CE NZ REMARK 470 LYS A 816 CG CD CE NZ REMARK 470 GLU A 822 CG CD OE1 OE2 REMARK 470 ASN A 823 CG OD1 ND2 REMARK 470 LYS A 824 CG CD CE NZ REMARK 470 ASP A 836 CG OD1 OD2 REMARK 470 GLN A 839 CG CD OE1 NE2 REMARK 470 GLN A 842 CG CD OE1 NE2 REMARK 470 ASP A 843 CG OD1 OD2 REMARK 470 ASP A 846 CG OD1 OD2 REMARK 470 ASP A 848 CG OD1 OD2 REMARK 470 GLU A 850 CG CD OE1 OE2 REMARK 470 ARG A 853 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 854 CG1 CG2 CD1 REMARK 470 MET A 855 CG SD CE REMARK 470 ASN A 857 CG OD1 ND2 REMARK 470 ASN A 858 CG OD1 ND2 REMARK 470 ASP A 864 CG OD1 OD2 REMARK 470 ASP A 865 CG OD1 OD2 REMARK 470 THR A 876 OG1 CG2 REMARK 470 SER A 878 OG REMARK 470 ARG A 879 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 880 CG OD1 OD2 REMARK 470 LYS A 881 CG CD CE NZ REMARK 470 ILE A 883 CG1 CG2 CD1 REMARK 470 ASP A 884 CG OD1 OD2 REMARK 470 ILE A 885 CG1 CG2 CD1 REMARK 470 LEU A 888 CG CD1 CD2 REMARK 470 THR A 889 OG1 CG2 REMARK 470 LYS A 890 CG CD CE NZ REMARK 470 GLN A 891 CG CD OE1 NE2 REMARK 470 ARG A 892 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 893 CG CD1 CD2 REMARK 470 VAL A 894 CG1 CG2 REMARK 470 ASP A 895 CG OD1 OD2 REMARK 470 ASP A 897 CG OD1 OD2 REMARK 470 GLU A 933 CG CD OE1 OE2 REMARK 470 ASP A 937 CG OD1 OD2 REMARK 470 LYS A 938 CG CD CE NZ REMARK 470 ASP A 940 CG OD1 OD2 REMARK 470 MET A 942 CG SD CE REMARK 470 GLU A 944 CG CD OE1 OE2 REMARK 470 THR A 945 OG1 CG2 REMARK 470 ARG A 948 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 969 CG OD1 OD2 REMARK 470 GLU A 975 CG CD OE1 OE2 REMARK 470 ASN A1035 CG OD1 ND2 REMARK 470 ILE A1094 CG1 CG2 CD1 REMARK 470 ASP A1096 CG OD1 OD2 REMARK 470 LYS A1097 CG CD CE NZ REMARK 470 MET A1102 CG SD CE REMARK 470 MET A1125 CG SD CE REMARK 470 ASP A1132 CG OD1 OD2 REMARK 470 PHE A1164 CG CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 137 -8.70 84.31 REMARK 500 MET A 144 118.70 -161.30 REMARK 500 LYS A 334 -141.62 -67.19 REMARK 500 LEU A 340 79.50 52.06 REMARK 500 HIS A 344 -169.58 -163.84 REMARK 500 ALA A 345 62.37 62.43 REMARK 500 MET A 358 56.36 -100.23 REMARK 500 HIS A 361 -1.56 84.69 REMARK 500 SER A 396 -2.24 80.61 REMARK 500 THR A 402 12.87 56.75 REMARK 500 SER A 449 -8.50 66.57 REMARK 500 LYS A 515 45.71 -107.53 REMARK 500 GLU A 590 -25.67 -144.21 REMARK 500 ASP A 595 -129.14 55.65 REMARK 500 TRP A 716 -134.11 55.38 REMARK 500 GLN A 887 -126.30 51.16 REMARK 500 LYS A 890 -128.44 57.42 REMARK 500 ALA A 896 -123.83 58.06 REMARK 500 PRO A 932 -7.66 -58.39 REMARK 500 ASP A 940 -127.32 54.36 REMARK 500 ILE A 949 74.79 53.06 REMARK 500 VAL A1155 -59.66 -123.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-30928 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF PATCHED IN LIPID NANODISC - THE WILDTYPE DBREF 7DZQ A 2 709 UNP Q61115 PTC1_MOUSE 2 614 DBREF 7DZQ A 710 1175 UNP Q61115 PTC1_MOUSE 710 1175 SEQADV 7DZQ MET A -1 UNP Q61115 INITIATING METHIONINE SEQADV 7DZQ GLY A 0 UNP Q61115 EXPRESSION TAG SEQADV 7DZQ SER A 1 UNP Q61115 EXPRESSION TAG SEQADV 7DZQ THR A 1176 UNP Q61115 EXPRESSION TAG SEQADV 7DZQ LEU A 1177 UNP Q61115 EXPRESSION TAG SEQADV 7DZQ GLU A 1178 UNP Q61115 EXPRESSION TAG SEQADV 7DZQ VAL A 1179 UNP Q61115 EXPRESSION TAG SEQADV 7DZQ LEU A 1180 UNP Q61115 EXPRESSION TAG SEQADV 7DZQ PHE A 1181 UNP Q61115 EXPRESSION TAG SEQADV 7DZQ GLN A 1182 UNP Q61115 EXPRESSION TAG SEQADV 7DZQ GLY A 1183 UNP Q61115 EXPRESSION TAG SEQRES 1 A 1090 MET GLY SER ALA SER ALA GLY ASN ALA ALA GLY ALA LEU SEQRES 2 A 1090 GLY ARG GLN ALA GLY GLY GLY ARG ARG ARG ARG THR GLY SEQRES 3 A 1090 GLY PRO HIS ARG ALA ALA PRO ASP ARG ASP TYR LEU HIS SEQRES 4 A 1090 ARG PRO SER TYR CYS ASP ALA ALA PHE ALA LEU GLU GLN SEQRES 5 A 1090 ILE SER LYS GLY LYS ALA THR GLY ARG LYS ALA PRO LEU SEQRES 6 A 1090 TRP LEU ARG ALA LYS PHE GLN ARG LEU LEU PHE LYS LEU SEQRES 7 A 1090 GLY CYS TYR ILE GLN LYS ASN CYS GLY LYS PHE LEU VAL SEQRES 8 A 1090 VAL GLY LEU LEU ILE PHE GLY ALA PHE ALA VAL GLY LEU SEQRES 9 A 1090 LYS ALA ALA ASN LEU GLU THR ASN VAL GLU GLU LEU TRP SEQRES 10 A 1090 VAL GLU VAL GLY GLY ARG VAL SER ARG GLU LEU ASN TYR SEQRES 11 A 1090 THR ARG GLN LYS ILE GLY GLU GLU ALA MET PHE ASN PRO SEQRES 12 A 1090 GLN LEU MET ILE GLN THR PRO LYS GLU GLU GLY ALA ASN SEQRES 13 A 1090 VAL LEU THR THR GLU ALA LEU LEU GLN HIS LEU ASP SER SEQRES 14 A 1090 ALA LEU GLN ALA SER ARG VAL HIS VAL TYR MET TYR ASN SEQRES 15 A 1090 ARG GLN TRP LYS LEU GLU HIS LEU CYS TYR LYS SER GLY SEQRES 16 A 1090 GLU LEU ILE THR GLU THR GLY TYR MET ASP GLN ILE ILE SEQRES 17 A 1090 GLU TYR LEU TYR PRO CYS LEU ILE ILE THR PRO LEU ASP SEQRES 18 A 1090 CYS PHE TRP GLU GLY ALA LYS LEU GLN SER GLY THR ALA SEQRES 19 A 1090 TYR LEU LEU GLY LYS PRO PRO LEU ARG TRP THR ASN PHE SEQRES 20 A 1090 ASP PRO LEU GLU PHE LEU GLU GLU LEU LYS LYS ILE ASN SEQRES 21 A 1090 TYR GLN VAL ASP SER TRP GLU GLU MET LEU ASN LYS ALA SEQRES 22 A 1090 GLU VAL GLY HIS GLY TYR MET ASP ARG PRO CYS LEU ASN SEQRES 23 A 1090 PRO ALA ASP PRO ASP CYS PRO ALA THR ALA PRO ASN LYS SEQRES 24 A 1090 ASN SER THR LYS PRO LEU ASP VAL ALA LEU VAL LEU ASN SEQRES 25 A 1090 GLY GLY CYS GLN GLY LEU SER ARG LYS TYR MET HIS TRP SEQRES 26 A 1090 GLN GLU GLU LEU ILE VAL GLY GLY THR VAL LYS ASN ALA SEQRES 27 A 1090 THR GLY LYS LEU VAL SER ALA HIS ALA LEU GLN THR MET SEQRES 28 A 1090 PHE GLN LEU MET THR PRO LYS GLN MET TYR GLU HIS PHE SEQRES 29 A 1090 ARG GLY TYR ASP TYR VAL SER HIS ILE ASN TRP ASN GLU SEQRES 30 A 1090 ASP ARG ALA ALA ALA ILE LEU GLU ALA TRP GLN ARG THR SEQRES 31 A 1090 TYR VAL GLU VAL VAL HIS GLN SER VAL ALA PRO ASN SER SEQRES 32 A 1090 THR GLN LYS VAL LEU PRO PHE THR THR THR THR LEU ASP SEQRES 33 A 1090 ASP ILE LEU LYS SER PHE SER ASP VAL SER VAL ILE ARG SEQRES 34 A 1090 VAL ALA SER GLY TYR LEU LEU MET LEU ALA TYR ALA CYS SEQRES 35 A 1090 LEU THR MET LEU ARG TRP ASP CYS SER LYS SER GLN GLY SEQRES 36 A 1090 ALA VAL GLY LEU ALA GLY VAL LEU LEU VAL ALA LEU SER SEQRES 37 A 1090 VAL ALA ALA GLY LEU GLY LEU CYS SER LEU ILE GLY ILE SEQRES 38 A 1090 SER PHE ASN ALA ALA THR THR GLN VAL LEU PRO PHE LEU SEQRES 39 A 1090 ALA LEU GLY VAL GLY VAL ASP ASP VAL PHE LEU LEU ALA SEQRES 40 A 1090 HIS ALA PHE SER GLU THR GLY GLN ASN LYS ARG ILE PRO SEQRES 41 A 1090 PHE GLU ASP ARG THR GLY GLU CYS LEU LYS ARG THR GLY SEQRES 42 A 1090 ALA SER VAL ALA LEU THR SER ILE SER ASN VAL THR ALA SEQRES 43 A 1090 PHE PHE MET ALA ALA LEU ILE PRO ILE PRO ALA LEU ARG SEQRES 44 A 1090 ALA PHE SER LEU GLN ALA ALA VAL VAL VAL VAL PHE ASN SEQRES 45 A 1090 PHE ALA MET VAL LEU LEU ILE PHE PRO ALA ILE LEU SER SEQRES 46 A 1090 MET ASP LEU TYR ARG ARG GLU ASP ARG ARG LEU ASP ILE SEQRES 47 A 1090 PHE CYS CYS PHE THR SER PRO CYS VAL SER ARG VAL ILE SEQRES 48 A 1090 GLN VAL GLU PRO GLN GLU PRO PRO CYS THR LYS TRP THR SEQRES 49 A 1090 LEU SER SER PHE ALA GLU LYS HIS TYR ALA PRO PHE LEU SEQRES 50 A 1090 LEU LYS PRO LYS ALA LYS VAL VAL VAL ILE LEU LEU PHE SEQRES 51 A 1090 LEU GLY LEU LEU GLY VAL SER LEU TYR GLY THR THR ARG SEQRES 52 A 1090 VAL ARG ASP GLY LEU ASP LEU THR ASP ILE VAL PRO ARG SEQRES 53 A 1090 GLU THR ARG GLU TYR ASP PHE ILE ALA ALA GLN PHE LYS SEQRES 54 A 1090 TYR PHE SER PHE TYR ASN MET TYR ILE VAL THR GLN LYS SEQRES 55 A 1090 ALA ASP TYR PRO ASN ILE GLN HIS LEU LEU TYR ASP LEU SEQRES 56 A 1090 HIS LYS SER PHE SER ASN VAL LYS TYR VAL MET LEU GLU SEQRES 57 A 1090 GLU ASN LYS GLN LEU PRO GLN MET TRP LEU HIS TYR PHE SEQRES 58 A 1090 ARG ASP TRP LEU GLN GLY LEU GLN ASP ALA PHE ASP SER SEQRES 59 A 1090 ASP TRP GLU THR GLY ARG ILE MET PRO ASN ASN TYR LYS SEQRES 60 A 1090 ASN GLY SER ASP ASP GLY VAL LEU ALA TYR LYS LEU LEU SEQRES 61 A 1090 VAL GLN THR GLY SER ARG ASP LYS PRO ILE ASP ILE SER SEQRES 62 A 1090 GLN LEU THR LYS GLN ARG LEU VAL ASP ALA ASP GLY ILE SEQRES 63 A 1090 ILE ASN PRO SER ALA PHE TYR ILE TYR LEU THR ALA TRP SEQRES 64 A 1090 VAL SER ASN ASP PRO VAL ALA TYR ALA ALA SER GLN ALA SEQRES 65 A 1090 ASN ILE ARG PRO HIS ARG PRO GLU TRP VAL HIS ASP LYS SEQRES 66 A 1090 ALA ASP TYR MET PRO GLU THR ARG LEU ARG ILE PRO ALA SEQRES 67 A 1090 ALA GLU PRO ILE GLU TYR ALA GLN PHE PRO PHE TYR LEU SEQRES 68 A 1090 ASN GLY LEU ARG ASP THR SER ASP PHE VAL GLU ALA ILE SEQRES 69 A 1090 GLU LYS VAL ARG VAL ILE CYS ASN ASN TYR THR SER LEU SEQRES 70 A 1090 GLY LEU SER SER TYR PRO ASN GLY TYR PRO PHE LEU PHE SEQRES 71 A 1090 TRP GLU GLN TYR ILE SER LEU ARG HIS TRP LEU LEU LEU SEQRES 72 A 1090 SER ILE SER VAL VAL LEU ALA CYS THR PHE LEU VAL CYS SEQRES 73 A 1090 ALA VAL PHE LEU LEU ASN PRO TRP THR ALA GLY ILE ILE SEQRES 74 A 1090 VAL MET VAL LEU ALA LEU MET THR VAL GLU LEU PHE GLY SEQRES 75 A 1090 MET MET GLY LEU ILE GLY ILE LYS LEU SER ALA VAL PRO SEQRES 76 A 1090 VAL VAL ILE LEU ILE ALA SER VAL GLY ILE GLY VAL GLU SEQRES 77 A 1090 PHE THR VAL HIS VAL ALA LEU ALA PHE LEU THR ALA ILE SEQRES 78 A 1090 GLY ASP LYS ASN HIS ARG ALA MET LEU ALA LEU GLU HIS SEQRES 79 A 1090 MET PHE ALA PRO VAL LEU ASP GLY ALA VAL SER THR LEU SEQRES 80 A 1090 LEU GLY VAL LEU MET LEU ALA GLY SER GLU PHE ASP PHE SEQRES 81 A 1090 ILE VAL ARG TYR PHE PHE ALA VAL LEU ALA ILE LEU THR SEQRES 82 A 1090 VAL LEU GLY VAL LEU ASN GLY LEU VAL LEU LEU PRO VAL SEQRES 83 A 1090 LEU LEU SER PHE PHE GLY PRO CYS PRO GLU VAL SER PRO SEQRES 84 A 1090 ALA ASN GLY THR LEU GLU VAL LEU PHE GLN GLY HET NAG B 1 14 HET NAG B 2 14 HET CLR A1201 28 HET NAG A1202 14 HET NAG A1203 14 HET NAG A1204 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CLR CHOLESTEROL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 2 NAG 5(C8 H15 N O6) FORMUL 3 CLR C27 H46 O HELIX 1 AA1 ALA A 61 ASN A 83 1 23 HELIX 2 AA2 GLY A 85 LEU A 102 1 18 HELIX 3 AA3 ASN A 110 VAL A 116 1 7 HELIX 4 AA4 GLY A 120 ILE A 133 1 14 HELIX 5 AA5 THR A 157 VAL A 174 1 18 HELIX 6 AA6 LYS A 184 CYS A 189 1 6 HELIX 7 AA7 MET A 202 LEU A 209 1 8 HELIX 8 AA8 PRO A 217 GLN A 228 5 12 HELIX 9 AA9 ARG A 241 PHE A 245 5 5 HELIX 10 AB1 ASP A 246 ASN A 258 1 13 HELIX 11 AB2 VAL A 261 ALA A 271 1 11 HELIX 12 AB3 ASP A 304 ASN A 310 1 7 HELIX 13 AB4 GLN A 324 ILE A 328 1 5 HELIX 14 AB5 TYR A 365 ILE A 371 1 7 HELIX 15 AB6 ASN A 374 GLN A 395 1 22 HELIX 16 AB7 THR A 409 ASP A 422 1 14 HELIX 17 AB8 SER A 424 LEU A 444 1 21 HELIX 18 AB9 GLY A 453 ALA A 458 1 6 HELIX 19 AC1 LEU A 462 ILE A 477 1 16 HELIX 20 AC2 ASN A 482 VAL A 488 1 7 HELIX 21 AC3 VAL A 488 GLN A 513 1 26 HELIX 22 AC4 ARG A 522 ILE A 551 1 30 HELIX 23 AC5 ILE A 553 ARG A 588 1 36 HELIX 24 AC6 LEU A 718 LYS A 732 1 15 HELIX 25 AC7 LYS A 732 ARG A 756 1 25 HELIX 26 AC8 ASP A 762 ILE A 766 5 5 HELIX 27 AC9 THR A 771 PHE A 784 1 14 HELIX 28 AD1 ASP A 797 ASN A 800 5 4 HELIX 29 AD2 ILE A 801 SER A 811 1 11 HELIX 30 AD3 MET A 829 GLY A 852 1 24 HELIX 31 AD4 SER A 863 GLN A 875 1 13 HELIX 32 AD5 ALA A 904 ASP A 916 1 13 HELIX 33 AD6 ASP A 916 GLN A 924 1 9 HELIX 34 AD7 GLU A 944 ILE A 949 1 6 HELIX 35 AD8 ASP A 969 SER A 989 1 21 HELIX 36 AD9 GLY A 998 TRP A 1004 1 7 HELIX 37 AE1 GLU A 1005 ILE A 1008 5 4 HELIX 38 AE2 SER A 1009 LEU A 1033 1 25 HELIX 39 AE3 ASN A 1035 GLY A 1061 1 27 HELIX 40 AE4 SER A 1065 ALA A 1093 1 29 HELIX 41 AE5 ASP A 1096 MET A 1125 1 30 HELIX 42 AE6 LEU A 1126 SER A 1129 5 4 HELIX 43 AE7 PHE A 1131 ARG A 1136 1 6 HELIX 44 AE8 TYR A 1137 LEU A 1154 1 18 HELIX 45 AE9 VAL A 1155 PHE A 1164 1 10 SHEET 1 AA1 3 ILE A 214 ILE A 215 0 SHEET 2 AA1 3 SER A 342 PHE A 350 -1 O MET A 349 N ILE A 215 SHEET 3 AA1 3 VAL A 329 VAL A 333 -1 N VAL A 333 O SER A 342 SHEET 1 AA2 4 ILE A 214 ILE A 215 0 SHEET 2 AA2 4 SER A 342 PHE A 350 -1 O MET A 349 N ILE A 215 SHEET 3 AA2 4 LEU A 143 PRO A 148 -1 N GLN A 146 O LEU A 346 SHEET 4 AA2 4 GLN A 403 PRO A 407 -1 O LEU A 406 N ILE A 145 SHEET 1 AA3 2 TYR A 177 MET A 178 0 SHEET 2 AA3 2 ARG A 181 GLN A 182 -1 O ARG A 181 N MET A 178 SHEET 1 AA4 2 CYS A 313 GLN A 314 0 SHEET 2 AA4 2 HIS A 322 TRP A 323 -1 O TRP A 323 N CYS A 313 SHEET 1 AA5 3 ALA A 958 ASN A 965 0 SHEET 2 AA5 3 PHE A 786 THR A 793 -1 N TYR A 787 O LEU A 964 SHEET 3 AA5 3 SER A 994 TYR A 995 -1 O TYR A 995 N VAL A 792 SSBOND 1 CYS A 189 CYS A 212 1555 1555 2.04 SSBOND 2 CYS A 220 CYS A 313 1555 1555 2.03 SSBOND 3 CYS A 282 CYS A 290 1555 1555 2.04 LINK ND2 ASN A 127 C1 NAG A1202 1555 1555 1.44 LINK ND2 ASN A 335 C1 NAG A1203 1555 1555 1.52 LINK ND2 ASN A 400 C1 NAG A1204 1555 1555 1.31 LINK ND2 ASN A 986 C1 NAG B 1 1555 1555 1.47 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.44 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000