HEADER OXIDOREDUCTASE 27-JAN-21 7E0D TITLE STRUCTURE OF L-GLUTAMATE OXIDASE R305E MUTANT IN COMPLEX WITH L- TITLE 2 ARGININE COMPND MOL_ID: 1; COMPND 2 MOLECULE: L-GLUTAMATE OXIDASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.4.3.11; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES SP. X-119-6; SOURCE 3 ORGANISM_TAXID: 196112; SOURCE 4 GENE: LGOX; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: JM109; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMAL-C2 KEYWDS L-GLUTAMIC ACID OXIDASE, L-AMINO ACID OXIDASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR N.ITO,S.MATSUO,K.INAGAKI,K.IMADA REVDAT 3 29-NOV-23 7E0D 1 REMARK REVDAT 2 21-APR-21 7E0D 1 JRNL REVDAT 1 07-APR-21 7E0D 0 JRNL AUTH Y.YANO,S.MATSUO,N.ITO,T.TAMURA,H.KUSAKABE,K.INAGAKI,K.IMADA JRNL TITL A NEW L-ARGININE OXIDASE ENGINEERED FROM L-GLUTAMATE JRNL TITL 2 OXIDASE. JRNL REF PROTEIN SCI. V. 30 1044 2021 JRNL REFN ESSN 1469-896X JRNL PMID 33764624 JRNL DOI 10.1002/PRO.4070 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.15.2_3472: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 54.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 3 NUMBER OF REFLECTIONS : 21093 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 1051 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 54.0230 - 5.3985 0.85 2390 148 0.1931 0.2113 REMARK 3 2 5.3985 - 4.2855 0.93 2480 126 0.1570 0.2093 REMARK 3 3 4.2855 - 3.7439 0.95 2504 134 0.1605 0.1977 REMARK 3 4 3.7439 - 3.4017 0.97 2524 122 0.1999 0.2699 REMARK 3 5 3.4017 - 3.1579 0.98 2535 133 0.2132 0.2831 REMARK 3 6 3.1579 - 2.9717 0.98 2543 116 0.2380 0.3388 REMARK 3 7 2.9717 - 2.8229 0.99 2528 150 0.2497 0.3396 REMARK 3 8 2.8229 - 2.7000 0.99 2538 122 0.2589 0.3540 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.930 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 5007 REMARK 3 ANGLE : 0.549 6832 REMARK 3 CHIRALITY : 0.040 714 REMARK 3 PLANARITY : 0.004 895 REMARK 3 DIHEDRAL : 6.800 4027 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7E0D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-FEB-21. REMARK 100 THE DEPOSITION ID IS D_1300020536. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-NOV-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : DOUBLE-CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21123 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 54.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.17800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : 0.69900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2E1M REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12% (W/V) PEG 8000, 0.1M TRIS-HCL REMARK 280 PH7.0, 75MM MGCL2, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.73367 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 113.46733 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 85.10050 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 141.83417 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 28.36683 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 56.73367 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 113.46733 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 141.83417 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 85.10050 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 28.36683 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 42370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 62.38000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -108.04533 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 28.36683 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1117 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1122 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1130 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 15 REMARK 465 ASN A 16 REMARK 465 GLU A 17 REMARK 465 ARG A 364 REMARK 465 ASP A 365 REMARK 465 GLY A 366 REMARK 465 HIS A 367 REMARK 465 HIS A 368 REMARK 465 GLY A 369 REMARK 465 GLU A 370 REMARK 465 LEU A 371 REMARK 465 GLU A 388 REMARK 465 PRO A 389 REMARK 465 TYR A 390 REMARK 465 LEU A 481 REMARK 465 ALA A 482 REMARK 465 LEU A 483 REMARK 465 PRO A 484 REMARK 465 GLN A 485 REMARK 465 SER A 486 REMARK 465 VAL A 487 REMARK 465 ARG A 488 REMARK 465 ASN A 489 REMARK 465 LEU A 490 REMARK 465 PRO A 491 REMARK 465 THR A 492 REMARK 465 GLY A 493 REMARK 465 LEU A 494 REMARK 465 LEU A 495 REMARK 465 GLY A 496 REMARK 465 ALA A 497 REMARK 465 HIS A 498 REMARK 465 PRO A 499 REMARK 465 SER A 500 REMARK 465 VAL A 501 REMARK 465 ASP A 502 REMARK 465 GLU A 503 REMARK 465 SER A 504 REMARK 465 ARG A 505 REMARK 465 ILE A 506 REMARK 465 GLY A 507 REMARK 465 GLU A 508 REMARK 465 GLU A 509 REMARK 465 GLN A 510 REMARK 465 VAL A 511 REMARK 465 GLU A 512 REMARK 465 TYR A 513 REMARK 465 TYR A 514 REMARK 465 ARG A 515 REMARK 465 ASN A 516 REMARK 465 SER A 517 REMARK 465 GLU A 518 REMARK 465 LEU A 519 REMARK 465 ARG A 520 REMARK 465 VAL A 673 REMARK 465 GLY A 674 REMARK 465 ASP A 675 REMARK 465 THR A 676 REMARK 465 GLY A 677 REMARK 465 VAL A 678 REMARK 465 THR A 679 REMARK 465 ALA A 680 REMARK 465 ALA A 681 REMARK 465 ALA A 682 REMARK 465 GLY A 683 REMARK 465 ARG A 684 REMARK 465 ARG A 685 REMARK 465 GLY A 686 REMARK 465 ALA A 687 REMARK 465 ALA A 688 REMARK 465 ALA A 689 REMARK 465 ALA A 690 REMARK 465 THR A 691 REMARK 465 GLU A 692 REMARK 465 PRO A 693 REMARK 465 MET A 694 REMARK 465 ARG A 695 REMARK 465 GLU A 696 REMARK 465 GLU A 697 REMARK 465 ALA A 698 REMARK 465 LEU A 699 REMARK 465 THR A 700 REMARK 465 SER A 701 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1108 O HOH A 1133 1.85 REMARK 500 O HOH A 1089 O HOH A 1109 1.87 REMARK 500 O GLU A 338 O HOH A 1001 1.88 REMARK 500 OD1 ASP A 399 O HOH A 1002 1.97 REMARK 500 O PRO A 108 O HOH A 1003 1.97 REMARK 500 OE1 GLU A 284 O HOH A 1004 2.02 REMARK 500 OE1 GLU A 448 O HOH A 1005 2.02 REMARK 500 OD1 ASP A 38 O HOH A 1006 2.03 REMARK 500 O HOH A 1170 O HOH A 1176 2.05 REMARK 500 OD1 ASP A 459 O HOH A 1007 2.06 REMARK 500 OE2 GLU A 294 O HOH A 1008 2.06 REMARK 500 O HOH A 1110 O HOH A 1175 2.08 REMARK 500 O HOH A 1143 O HOH A 1169 2.08 REMARK 500 OD2 ASP A 49 O HOH A 1009 2.09 REMARK 500 O HOH A 1050 O HOH A 1165 2.10 REMARK 500 O2A FAD A 900 O HOH A 1010 2.11 REMARK 500 O GLY A 522 O HOH A 1011 2.11 REMARK 500 OE1 GLU A 457 O HOH A 1012 2.12 REMARK 500 O HOH A 1080 O HOH A 1138 2.12 REMARK 500 OE2 GLU A 474 O HOH A 1013 2.12 REMARK 500 NH2 ARG A 445 O HOH A 1005 2.13 REMARK 500 O ALA A 480 O HOH A 1014 2.17 REMARK 500 O HOH A 1145 O HOH A 1188 2.18 REMARK 500 O HOH A 1075 O HOH A 1136 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 107 151.89 -44.75 REMARK 500 ASP A 172 -120.06 54.18 REMARK 500 ASN A 301 41.84 73.93 REMARK 500 PRO A 322 23.91 -74.06 REMARK 500 ALA A 324 -162.86 -79.00 REMARK 500 ARG A 541 -62.63 66.21 REMARK 500 SER A 565 -123.33 47.70 REMARK 500 ASP A 572 31.21 -84.80 REMARK 500 HIS A 624 -12.59 73.21 REMARK 500 PHE A 629 10.82 -143.82 REMARK 500 LYS A 650 60.42 -100.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FAD A 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ARG A 901 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2E1M RELATED DB: PDB REMARK 900 RELATED ID: 7E0C RELATED DB: PDB DBREF 7E0D A 16 701 UNP Q8L3C7 Q8L3C7_9ACTN 16 701 SEQADV 7E0D MET A 15 UNP Q8L3C7 EXPRESSION TAG SEQADV 7E0D GLU A 305 UNP Q8L3C7 ARG 305 ENGINEERED MUTATION SEQRES 1 A 687 MET ASN GLU MET THR TYR GLU GLN LEU ALA ARG GLU LEU SEQRES 2 A 687 LEU LEU VAL GLY PRO ALA PRO THR ASN GLU ASP LEU LYS SEQRES 3 A 687 LEU ARG TYR LEU ASP VAL LEU ILE ASP ASN GLY LEU ASN SEQRES 4 A 687 PRO PRO GLY PRO PRO LYS ARG ILE LEU ILE VAL GLY ALA SEQRES 5 A 687 GLY ILE ALA GLY LEU VAL ALA GLY ASP LEU LEU THR ARG SEQRES 6 A 687 ALA GLY HIS ASP VAL THR ILE LEU GLU ALA ASN ALA ASN SEQRES 7 A 687 ARG VAL GLY GLY ARG ILE LYS THR PHE HIS ALA LYS LYS SEQRES 8 A 687 GLY GLU PRO SER PRO PHE ALA ASP PRO ALA GLN TYR ALA SEQRES 9 A 687 GLU ALA GLY ALA MET ARG LEU PRO SER PHE HIS PRO LEU SEQRES 10 A 687 THR LEU ALA LEU ILE ASP LYS LEU GLY LEU LYS ARG ARG SEQRES 11 A 687 LEU PHE PHE ASN VAL ASP ILE ASP PRO GLN THR GLY ASN SEQRES 12 A 687 GLN ASP ALA PRO VAL PRO PRO VAL PHE TYR LYS SER PHE SEQRES 13 A 687 LYS ASP GLY LYS THR TRP THR ASN GLY ALA PRO SER PRO SEQRES 14 A 687 GLU PHE LYS GLU PRO ASP LYS ARG ASN HIS THR TRP ILE SEQRES 15 A 687 ARG THR ASN ARG GLU GLN VAL ARG ARG ALA GLN TYR ALA SEQRES 16 A 687 THR ASP PRO SER SER ILE ASN GLU GLY PHE HIS LEU THR SEQRES 17 A 687 GLY CYS GLU THR ARG LEU THR VAL SER ASP MET VAL ASN SEQRES 18 A 687 GLN ALA LEU GLU PRO VAL ARG ASP TYR TYR SER VAL LYS SEQRES 19 A 687 GLN ASP ASP GLY THR ARG VAL ASN LYS PRO PHE LYS GLU SEQRES 20 A 687 TRP LEU ALA GLY TRP ALA ASP VAL VAL ARG ASP PHE ASP SEQRES 21 A 687 GLY TYR SER MET GLY ARG PHE LEU ARG GLU TYR ALA GLU SEQRES 22 A 687 PHE SER ASP GLU ALA VAL GLU ALA ILE GLY THR ILE GLU SEQRES 23 A 687 ASN MET THR SER GLU LEU HIS LEU ALA PHE PHE HIS SER SEQRES 24 A 687 PHE LEU GLY ARG SER ASP ILE ASP PRO ARG ALA THR TYR SEQRES 25 A 687 TRP GLU ILE GLU GLY GLY SER ARG MET LEU PRO GLU THR SEQRES 26 A 687 LEU ALA LYS ASP LEU ARG ASP GLN ILE VAL MET GLY GLN SEQRES 27 A 687 ARG MET VAL ARG LEU GLU TYR TYR ASP PRO GLY ARG ASP SEQRES 28 A 687 GLY HIS HIS GLY GLU LEU THR GLY PRO GLY GLY PRO ALA SEQRES 29 A 687 VAL ALA ILE GLN THR VAL PRO GLU GLY GLU PRO TYR ALA SEQRES 30 A 687 ALA THR GLN THR TRP THR GLY ASP LEU ALA ILE VAL THR SEQRES 31 A 687 ILE PRO PHE SER SER LEU ARG PHE VAL LYS VAL THR PRO SEQRES 32 A 687 PRO PHE SER TYR LYS LYS ARG ARG ALA VAL ILE GLU THR SEQRES 33 A 687 HIS TYR ASP GLN ALA THR LYS VAL LEU LEU GLU PHE SER SEQRES 34 A 687 ARG ARG TRP TRP GLU PHE THR GLU ALA ASP TRP LYS ARG SEQRES 35 A 687 GLU LEU ASP ALA ILE ALA PRO GLY LEU TYR ASP TYR TYR SEQRES 36 A 687 GLN GLN TRP GLY GLU ASP ASP ALA GLU ALA ALA LEU ALA SEQRES 37 A 687 LEU PRO GLN SER VAL ARG ASN LEU PRO THR GLY LEU LEU SEQRES 38 A 687 GLY ALA HIS PRO SER VAL ASP GLU SER ARG ILE GLY GLU SEQRES 39 A 687 GLU GLN VAL GLU TYR TYR ARG ASN SER GLU LEU ARG GLY SEQRES 40 A 687 GLY VAL ARG PRO ALA THR ASN ALA TYR GLY GLY GLY SER SEQRES 41 A 687 THR THR ASP ASN PRO ASN ARG PHE MET TYR TYR PRO SER SEQRES 42 A 687 HIS PRO VAL PRO GLY THR GLN GLY GLY VAL VAL LEU ALA SEQRES 43 A 687 ALA TYR SER TRP SER ASP ASP ALA ALA ARG TRP ASP SER SEQRES 44 A 687 PHE ASP ASP ALA GLU ARG TYR GLY TYR ALA LEU GLU ASN SEQRES 45 A 687 LEU GLN SER VAL HIS GLY ARG ARG ILE GLU VAL PHE TYR SEQRES 46 A 687 THR GLY ALA GLY GLN THR GLN SER TRP LEU ARG ASP PRO SEQRES 47 A 687 TYR ALA CYS GLY GLU ALA ALA VAL TYR THR PRO HIS GLN SEQRES 48 A 687 MET THR ALA PHE HIS LEU ASP VAL VAL ARG PRO GLU GLY SEQRES 49 A 687 PRO VAL TYR PHE ALA GLY GLU HIS VAL SER LEU LYS HIS SEQRES 50 A 687 ALA TRP ILE GLU GLY ALA VAL GLU THR ALA VAL ARG ALA SEQRES 51 A 687 ALA ILE ALA VAL ASN GLU ALA PRO VAL GLY ASP THR GLY SEQRES 52 A 687 VAL THR ALA ALA ALA GLY ARG ARG GLY ALA ALA ALA ALA SEQRES 53 A 687 THR GLU PRO MET ARG GLU GLU ALA LEU THR SER HET FAD A 900 53 HET ARG A 901 12 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM ARG ARGININE FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 ARG C6 H15 N4 O2 1+ FORMUL 4 HOH *190(H2 O) HELIX 1 AA1 THR A 19 LEU A 29 1 11 HELIX 2 AA2 ASP A 38 ILE A 48 1 11 HELIX 3 AA3 GLY A 67 ALA A 80 1 14 HELIX 4 AA4 HIS A 129 LEU A 139 1 11 HELIX 5 AA5 ARG A 205 ASP A 211 1 7 HELIX 6 AA6 PRO A 212 PHE A 219 1 8 HELIX 7 AA7 THR A 222 LEU A 228 5 7 HELIX 8 AA8 THR A 229 ASP A 243 1 15 HELIX 9 AA9 PRO A 258 ASP A 274 1 17 HELIX 10 AB1 SER A 277 TYR A 285 1 9 HELIX 11 AB2 SER A 289 GLU A 300 1 12 HELIX 12 AB3 MET A 302 LEU A 306 5 5 HELIX 13 AB4 ALA A 309 SER A 318 1 10 HELIX 14 AB5 ARG A 334 ASP A 343 1 10 HELIX 15 AB6 PRO A 406 ARG A 411 1 6 HELIX 16 AB7 SER A 420 THR A 430 1 11 HELIX 17 AB8 ARG A 445 PHE A 449 5 5 HELIX 18 AB9 THR A 450 ALA A 462 1 13 HELIX 19 AC1 GLY A 464 GLY A 473 1 10 HELIX 20 AC2 SER A 565 ASP A 572 1 8 HELIX 21 AC3 GLU A 578 GLY A 592 1 15 HELIX 22 AC4 ARG A 593 VAL A 597 5 5 HELIX 23 AC5 HIS A 624 VAL A 634 1 11 HELIX 24 AC6 GLY A 644 SER A 648 5 5 HELIX 25 AC7 TRP A 653 GLU A 670 1 18 SHEET 1 AA1 5 ILE A 348 VAL A 349 0 SHEET 2 AA1 5 ASP A 83 LEU A 87 1 N ILE A 86 O VAL A 349 SHEET 3 AA1 5 ARG A 60 VAL A 64 1 N ILE A 63 O LEU A 87 SHEET 4 AA1 5 LEU A 400 VAL A 403 1 O ILE A 402 N LEU A 62 SHEET 5 AA1 5 VAL A 640 PHE A 642 1 O TYR A 641 N ALA A 401 SHEET 1 AA2 2 THR A 100 PHE A 101 0 SHEET 2 AA2 2 ALA A 118 GLU A 119 -1 O ALA A 118 N PHE A 101 SHEET 1 AA3 3 LEU A 125 PRO A 126 0 SHEET 2 AA3 3 TYR A 326 ILE A 329 -1 O TRP A 327 N LEU A 125 SHEET 3 AA3 3 ARG A 143 PHE A 146 -1 N ARG A 144 O GLU A 328 SHEET 1 AA4 2 PHE A 166 LYS A 168 0 SHEET 2 AA4 2 THR A 175 THR A 177 -1 O TRP A 176 N TYR A 167 SHEET 1 AA5 4 GLU A 201 ARG A 204 0 SHEET 2 AA5 4 TRP A 195 THR A 198 -1 N ILE A 196 O VAL A 203 SHEET 3 AA5 4 GLY A 533 THR A 536 1 O THR A 535 N ARG A 197 SHEET 4 AA5 4 PHE A 542 TYR A 544 -1 O MET A 543 N SER A 534 SHEET 1 AA6 2 SER A 246 LYS A 248 0 SHEET 2 AA6 2 ARG A 254 ASN A 256 -1 O VAL A 255 N VAL A 247 SHEET 1 AA7 4 GLN A 394 GLY A 398 0 SHEET 2 AA7 4 VAL A 379 PRO A 385 -1 N ILE A 381 O TRP A 396 SHEET 3 AA7 4 GLN A 352 TYR A 359 -1 N GLU A 358 O ALA A 380 SHEET 4 AA7 4 LYS A 414 THR A 416 1 O LYS A 414 N LEU A 357 SHEET 1 AA8 3 GLY A 556 TRP A 564 0 SHEET 2 AA8 3 ALA A 435 PHE A 442 -1 N LEU A 440 O VAL A 558 SHEET 3 AA8 3 TYR A 599 SER A 607 -1 O GLN A 604 N LEU A 439 CISPEP 1 MET A 18 THR A 19 0 -4.03 CISPEP 2 ALA A 33 PRO A 34 0 2.28 CISPEP 3 ASN A 53 PRO A 54 0 -4.17 CISPEP 4 GLU A 386 GLY A 387 0 -0.23 CISPEP 5 THR A 416 PRO A 417 0 -7.60 SITE 1 AC1 34 VAL A 64 GLY A 65 GLY A 67 ILE A 68 SITE 2 AC1 34 ALA A 69 GLU A 88 ALA A 89 GLY A 95 SITE 3 AC1 34 GLY A 96 ARG A 97 ILE A 98 GLY A 121 SITE 4 AC1 34 ALA A 122 MET A 123 ARG A 124 ARG A 353 SITE 5 AC1 34 MET A 354 ILE A 405 SER A 409 TYR A 562 SITE 6 AC1 34 TRP A 608 TYR A 613 GLU A 617 GLY A 644 SITE 7 AC1 34 GLU A 645 ALA A 652 TRP A 653 ILE A 654 SITE 8 AC1 34 ALA A 657 ARG A 901 HOH A1010 HOH A1067 SITE 9 AC1 34 HOH A1087 HOH A1098 SITE 1 AC2 9 ARG A 124 GLU A 305 HIS A 312 ASP A 433 SITE 2 AC2 9 TRP A 564 GLU A 617 ALA A 652 TRP A 653 SITE 3 AC2 9 FAD A 900 CRYST1 124.760 124.760 170.201 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008015 0.004628 0.000000 0.00000 SCALE2 0.000000 0.009255 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005875 0.00000