HEADER HYDROLASE 08-FEB-21 7E3E TITLE CRYSTAL STRUCTURE OF TRYPANOSOMA BRUCEI CATHEPSIN B R91C/T223C MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYSTEINE PEPTIDASE C (CPC); COMPND 3 CHAIN: A; COMPND 4 EC: 3.4.22.-; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRYPANOSOMA BRUCEI BRUCEI (STRAIN 927/4 SOURCE 3 GUTAT10.1); SOURCE 4 ORGANISM_TAXID: 185431; SOURCE 5 STRAIN: 927/4 GUTAT10.1; SOURCE 6 GENE: TB927.6.560; SOURCE 7 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS IN CELL CRYSTAL, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.ABE,T.T.PHAM,H.NEGISHI,K.YAMASHITA,K.HIRATA,T.UENO REVDAT 2 29-NOV-23 7E3E 1 REMARK REVDAT 1 15-DEC-21 7E3E 0 JRNL AUTH S.ABE,T.T.PHAM,H.NEGISHI,K.YAMASHITA,K.HIRATA,T.UENO JRNL TITL DESIGN OF AN IN-CELL PROTEIN CRYSTAL FOR THE ENVIRONMENTALLY JRNL TITL 2 RESPONSIVE CONSTRUCTION OF A SUPRAMOLECULAR FILAMENT. JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 60 12341 2021 JRNL REFN ESSN 1521-3773 JRNL PMID 33759310 JRNL DOI 10.1002/ANIE.202102039 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.76 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 19956 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.041 REMARK 3 FREE R VALUE TEST SET COUNT : 1006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1374 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3820 REMARK 3 BIN FREE R VALUE SET COUNT : 69 REMARK 3 BIN FREE R VALUE : 0.4570 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2379 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 67 REMARK 3 SOLVENT ATOMS : 68 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.75500 REMARK 3 B22 (A**2) : 0.75500 REMARK 3 B33 (A**2) : -1.51000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.275 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.233 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.189 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.498 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.930 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.887 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2530 ; 0.008 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 2141 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3453 ; 1.685 ; 1.680 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4994 ; 1.233 ; 1.613 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 306 ; 7.268 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 133 ;31.187 ;22.105 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 351 ;16.350 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;20.087 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 325 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2872 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 567 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 394 ; 0.184 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 20 ; 0.238 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1184 ; 0.165 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 54 ; 0.133 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1230 ; 2.247 ; 3.315 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1229 ; 2.239 ; 3.312 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1534 ; 3.528 ; 4.953 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1535 ; 3.527 ; 4.956 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1299 ; 2.858 ; 3.722 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1299 ; 2.856 ; 3.722 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1919 ; 4.571 ; 5.462 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1920 ; 4.570 ; 5.464 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7E3E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-FEB-21. REMARK 100 THE DEPOSITION ID IS D_1300020697. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-DEC-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL32XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : M REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20010 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 558.0 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.32 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 4HWY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: IN CELL CRYSTALLIZATION, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 62.55000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 62.55000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 27.51000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 62.55000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 62.55000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 27.51000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 62.55000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 62.55000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 27.51000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 62.55000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 62.55000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 27.51000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 465 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 466 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 HIS A 2 REMARK 465 LEU A 3 REMARK 465 MET A 4 REMARK 465 ARG A 5 REMARK 465 ALA A 6 REMARK 465 CYS A 7 REMARK 465 ILE A 8 REMARK 465 THR A 9 REMARK 465 PHE A 10 REMARK 465 CYS A 11 REMARK 465 ILE A 12 REMARK 465 ALA A 13 REMARK 465 SER A 14 REMARK 465 THR A 15 REMARK 465 ALA A 16 REMARK 465 VAL A 17 REMARK 465 VAL A 18 REMARK 465 ALA A 19 REMARK 465 VAL A 20 REMARK 465 ASN A 21 REMARK 465 ALA A 22 REMARK 465 ALA A 23 REMARK 465 LEU A 24 REMARK 465 VAL A 25 REMARK 465 LYS A 73 REMARK 465 ASN A 74 REMARK 465 ASN A 75 REMARK 465 ASN A 76 REMARK 465 ALA A 77 REMARK 465 THR A 339 REMARK 465 ALA A 340 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 119 CB - CA - C ANGL. DEV. = -19.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 117 -153.58 69.26 REMARK 500 ASN A 305 179.24 65.65 REMARK 500 REMARK 500 REMARK: NULL DBREF 7E3E A 1 340 UNP D6XHE1 D6XHE1_TRYB2 1 340 SEQADV 7E3E CYS A 91 UNP D6XHE1 ARG 91 ENGINEERED MUTATION SEQADV 7E3E CYS A 223 UNP D6XHE1 THR 223 ENGINEERED MUTATION SEQRES 1 A 340 MET HIS LEU MET ARG ALA CYS ILE THR PHE CYS ILE ALA SEQRES 2 A 340 SER THR ALA VAL VAL ALA VAL ASN ALA ALA LEU VAL ALA SEQRES 3 A 340 GLU ASP ALA PRO VAL LEU SER LYS ALA PHE VAL ASP ARG SEQRES 4 A 340 VAL ASN ARG LEU ASN ARG GLY ILE TRP LYS ALA LYS TYR SEQRES 5 A 340 ASP GLY VAL MET GLN ASN ILE THR LEU ARG GLU ALA LYS SEQRES 6 A 340 ARG LEU ASN GLY VAL ILE LYS LYS ASN ASN ASN ALA SER SEQRES 7 A 340 ILE LEU PRO LYS ARG ARG PHE THR GLU GLU GLU ALA CYS SEQRES 8 A 340 ALA PRO LEU PRO SER SER PHE ASP SER ALA GLU ALA TRP SEQRES 9 A 340 PRO ASN CYS PRO THR ILE PRO GLN ILE ALA ASP GLN SER SEQRES 10 A 340 ALA CYS GLY SER CYS TRP ALA VAL ALA ALA ALA SER ALA SEQRES 11 A 340 MET SER ASP ARG PHE CYS THR MET GLY GLY VAL GLN ASP SEQRES 12 A 340 VAL HIS ILE SER ALA GLY ASP LEU LEU ALA CYS CYS SER SEQRES 13 A 340 ASP CYS GLY ASP GLY CYS ASN GLY GLY ASP PRO ASP ARG SEQRES 14 A 340 ALA TRP ALA TYR PHE SER SER THR GLY LEU VAL SER ASP SEQRES 15 A 340 TYR CYS GLN PRO TYR PRO PHE PRO HIS CYS SER HIS HIS SEQRES 16 A 340 SER LYS SER LYS ASN GLY TYR PRO PRO CYS SER GLN PHE SEQRES 17 A 340 ASN PHE ASP THR PRO LYS CYS ASN TYR THR CYS ASP ASP SEQRES 18 A 340 PRO CYS ILE PRO VAL VAL ASN TYR ARG SER TRP THR SER SEQRES 19 A 340 TYR ALA LEU GLN GLY GLU ASP ASP TYR MET ARG GLU LEU SEQRES 20 A 340 PHE PHE ARG GLY PRO PHE GLU VAL ALA PHE ASP VAL TYR SEQRES 21 A 340 GLU ASP PHE ILE ALA TYR ASN SER GLY VAL TYR HIS HIS SEQRES 22 A 340 VAL SER GLY GLN TYR LEU GLY GLY HIS ALA VAL ARG LEU SEQRES 23 A 340 VAL GLY TRP GLY THR SER ASN GLY VAL PRO TYR TRP LYS SEQRES 24 A 340 ILE ALA ASN SER TRP ASN THR GLU TRP GLY MET ASP GLY SEQRES 25 A 340 TYR PHE LEU ILE ARG ARG GLY SER SER GLU CYS GLY ILE SEQRES 26 A 340 GLU ASP GLY GLY SER ALA GLY ILE PRO LEU ALA PRO ASN SEQRES 27 A 340 THR ALA HET NAG B 1 14 HET NAG B 2 14 HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 2 NAG 4(C8 H15 N O6) FORMUL 3 BMA C6 H12 O6 FORMUL 4 HOH *68(H2 O) HELIX 1 AA1 SER A 33 ASN A 44 1 12 HELIX 2 AA2 THR A 60 LEU A 67 1 8 HELIX 3 AA3 THR A 86 CYS A 91 1 6 HELIX 4 AA4 SER A 100 TRP A 104 1 5 HELIX 5 AA5 SER A 121 MET A 138 1 18 HELIX 6 AA6 SER A 147 CYS A 155 1 9 HELIX 7 AA7 ASP A 160 GLY A 164 5 5 HELIX 8 AA8 ASP A 166 THR A 177 1 12 HELIX 9 AA9 GLY A 239 GLY A 251 1 13 HELIX 10 AB1 GLU A 261 ALA A 265 1 5 HELIX 11 AB2 SER A 321 ILE A 325 5 5 SHEET 1 AA1 6 TRP A 48 ALA A 50 0 SHEET 2 AA1 6 TYR A 266 TYR A 271 -1 O ASN A 267 N LYS A 49 SHEET 3 AA1 6 TYR A 313 ARG A 317 1 O LEU A 315 N TYR A 271 SHEET 4 AA1 6 VAL A 295 ALA A 301 -1 N TRP A 298 O ILE A 316 SHEET 5 AA1 6 TYR A 278 SER A 292 -1 N ARG A 285 O ALA A 301 SHEET 6 AA1 6 PHE A 98 ASP A 99 -1 N PHE A 98 O TRP A 289 SHEET 1 AA2 8 TRP A 48 ALA A 50 0 SHEET 2 AA2 8 TYR A 266 TYR A 271 -1 O ASN A 267 N LYS A 49 SHEET 3 AA2 8 TYR A 313 ARG A 317 1 O LEU A 315 N TYR A 271 SHEET 4 AA2 8 VAL A 295 ALA A 301 -1 N TRP A 298 O ILE A 316 SHEET 5 AA2 8 TYR A 278 SER A 292 -1 N ARG A 285 O ALA A 301 SHEET 6 AA2 8 PHE A 253 TYR A 260 -1 N VAL A 259 O LEU A 279 SHEET 7 AA2 8 GLY A 329 PRO A 334 -1 O SER A 330 N GLU A 254 SHEET 8 AA2 8 SER A 231 LEU A 237 -1 N LEU A 237 O GLY A 329 SSBOND 1 CYS A 91 CYS A 223 1555 1554 2.07 SSBOND 2 CYS A 107 CYS A 136 1555 1555 2.06 SSBOND 3 CYS A 119 CYS A 162 1555 1555 2.06 SSBOND 4 CYS A 154 CYS A 215 1555 1555 2.09 SSBOND 5 CYS A 155 CYS A 158 1555 1555 2.11 SSBOND 6 CYS A 184 CYS A 219 1555 1555 2.09 SSBOND 7 CYS A 192 CYS A 205 1555 1555 2.10 LINK ND2 ASN A 58 C1 NAG B 1 1555 1555 1.45 LINK ND2 ASN A 216 C1 NAG C 1 1555 1555 1.43 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.46 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.46 CRYST1 125.100 125.100 55.020 90.00 90.00 90.00 P 42 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007994 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007994 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018175 0.00000