HEADER ISOMERASE 11-FEB-21 7E49 TITLE CRYSTAL STRUCTURE OF MIF BOUND TO COMPOUND10 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MACROPHAGE MIGRATION INHIBITORY FACTOR; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: MIF,GLYCOSYLATION-INHIBITING FACTOR,GIF,L-DOPACHROME COMPND 5 ISOMERASE,L-DOPACHROME TAUTOMERASE,PHENYLPYRUVATE TAUTOMERASE; COMPND 6 EC: 5.3.2.1,5.3.3.12; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MIF, GLIF, MMIF; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TAUTOMERASE AND CYTOKINE, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR C.P.FAN,D.Y.GUO,L.YANG REVDAT 2 29-NOV-23 7E49 1 REMARK REVDAT 1 15-FEB-23 7E49 0 JRNL AUTH L.YANG,D.GUO,C.FAN JRNL TITL IDENTIFICATION AND STRUCTURE-ACTIVITY RELATIONSHIPS OF JRNL TITL 2 DIETARY FLAVONOIDS AS HUMAN MACROPHAGE MIGRATION INHIBITORY JRNL TITL 3 FACTOR (MIF) INHIBITORS. JRNL REF J.AGRIC.FOOD CHEM. V. 69 10138 2021 JRNL REFN ESSN 1520-5118 JRNL PMID 34459191 JRNL DOI 10.1021/ACS.JAFC.1C03367 REMARK 2 REMARK 2 RESOLUTION. 1.57 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : TWIN_LSQ_F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.57 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 57062 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.221 REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.520 REMARK 3 FREE R VALUE TEST SET COUNT : 2008 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 20.9974 - 3.7896 0.96 4165 154 0.1655 0.1720 REMARK 3 2 3.7896 - 3.0107 0.97 4006 144 0.1754 0.2133 REMARK 3 3 3.0107 - 2.6310 0.97 3985 144 0.2067 0.2411 REMARK 3 4 2.6310 - 2.3908 0.97 3939 141 0.2235 0.2248 REMARK 3 5 2.3908 - 2.2196 0.96 3929 145 0.2143 0.2161 REMARK 3 6 2.2196 - 2.0889 0.96 3921 143 0.2172 0.2461 REMARK 3 7 2.0889 - 1.9844 0.96 3907 142 0.2261 0.2364 REMARK 3 8 1.9844 - 1.8980 0.96 3901 143 0.2356 0.2458 REMARK 3 9 1.8980 - 1.8250 0.96 3894 142 0.2594 0.2886 REMARK 3 10 1.8250 - 1.7621 0.97 3883 140 0.3034 0.3116 REMARK 3 11 1.7621 - 1.7070 0.96 3883 142 0.3410 0.4316 REMARK 3 12 1.7070 - 1.6582 0.96 3874 141 0.3719 0.3889 REMARK 3 13 1.6582 - 1.6146 0.97 3880 140 0.3890 0.3406 REMARK 3 14 1.6146 - 1.5752 0.95 3845 141 0.4774 0.4749 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.840 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: 0.1000 REMARK 3 OPERATOR: -K,-H,-L REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 2702 REMARK 3 ANGLE : 0.717 3688 REMARK 3 CHIRALITY : 0.054 403 REMARK 3 PLANARITY : 0.006 479 REMARK 3 DIHEDRAL : 8.248 1827 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -22.2851 7.1768 -12.0661 REMARK 3 T TENSOR REMARK 3 T11: 0.1030 T22: 0.1028 REMARK 3 T33: 0.2171 T12: -0.0012 REMARK 3 T13: 0.0040 T23: -0.0127 REMARK 3 L TENSOR REMARK 3 L11: 0.7128 L22: 1.0660 REMARK 3 L33: 1.4902 L12: 0.1396 REMARK 3 L13: -0.0755 L23: -0.5691 REMARK 3 S TENSOR REMARK 3 S11: -0.0431 S12: 0.0317 S13: -0.0493 REMARK 3 S21: 0.0206 S22: 0.0006 S23: -0.1072 REMARK 3 S31: 0.0135 S32: 0.0211 S33: 0.0235 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 1 THROUGH 12 OR RESID REMARK 3 14 THROUGH 27 OR (RESID 28 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB OR REMARK 3 NAME CG )) OR RESID 29 THROUGH 34 OR REMARK 3 RESID 37 THROUGH 76 OR (RESID 77 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB OR NAME CG OR NAME CD )) OR RESID REMARK 3 78 THROUGH 84 OR (RESID 85 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 86 THROUGH 114)) REMARK 3 SELECTION : (CHAIN B AND (RESID 1 THROUGH 12 OR RESID REMARK 3 14 THROUGH 23 OR (RESID 24 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB OR REMARK 3 NAME CG )) OR RESID 25 THROUGH 34 OR REMARK 3 RESID 37 THROUGH 76 OR (RESID 77 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB OR NAME CG OR NAME CD )) OR RESID REMARK 3 78 THROUGH 114)) REMARK 3 ATOM PAIRS NUMBER : 1515 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 1 THROUGH 12 OR RESID REMARK 3 14 THROUGH 27 OR (RESID 28 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB OR REMARK 3 NAME CG )) OR RESID 29 THROUGH 34 OR REMARK 3 RESID 37 THROUGH 76 OR (RESID 77 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB OR NAME CG OR NAME CD )) OR RESID REMARK 3 78 THROUGH 84 OR (RESID 85 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 86 THROUGH 114)) REMARK 3 SELECTION : (CHAIN C AND (RESID 1 THROUGH 12 OR RESID REMARK 3 14 THROUGH 23 OR (RESID 24 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB OR REMARK 3 NAME CG )) OR RESID 25 THROUGH 27 OR REMARK 3 (RESID 28 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB OR NAME CG )) OR REMARK 3 RESID 29 THROUGH 34 OR RESID 37 THROUGH REMARK 3 84 OR (RESID 85 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 86 THROUGH 114)) REMARK 3 ATOM PAIRS NUMBER : 1515 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7E49 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-FEB-21. REMARK 100 THE DEPOSITION ID IS D_1300020738. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-APR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57131 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.570 REMARK 200 RESOLUTION RANGE LOW (A) : 48.002 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 9.800 REMARK 200 R MERGE (I) : 0.09400 REMARK 200 R SYM (I) : 0.09400 REMARK 200 FOR THE DATA SET : 16.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.57 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.2 REMARK 200 DATA REDUNDANCY IN SHELL : 8.90 REMARK 200 R MERGE FOR SHELL (I) : 1.70300 REMARK 200 R SYM FOR SHELL (I) : 1.70300 REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1MIF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0M AMMONIUM SULFATE, 3% ISOPROPANOL, REMARK 280 PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 33.87800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.14700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.00800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 44.14700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.87800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.00800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -124.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 24 CD OE1 NE2 REMARK 470 TYR A 36 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLN B 28 CD OE1 NE2 REMARK 470 GLU B 85 CG CD OE1 OE2 REMARK 470 LYS C 77 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 360 O HOH B 395 2.11 REMARK 500 O HOH B 355 O HOH B 375 2.12 REMARK 500 O HOH A 361 O HOH A 395 2.14 REMARK 500 O HOH A 307 O HOH A 338 2.16 REMARK 500 O HOH B 352 O HOH B 388 2.16 REMARK 500 O HOH A 308 O HOH A 366 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 111 -158.31 -150.68 REMARK 500 SER B 111 -159.97 -149.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 400 DISTANCE = 6.00 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MYC A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MYC B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL C 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL C 204 DBREF 7E49 A 1 114 UNP P14174 MIF_HUMAN 2 115 DBREF 7E49 B 1 114 UNP P14174 MIF_HUMAN 2 115 DBREF 7E49 C 1 114 UNP P14174 MIF_HUMAN 2 115 SEQRES 1 A 114 PRO MET PHE ILE VAL ASN THR ASN VAL PRO ARG ALA SER SEQRES 2 A 114 VAL PRO ASP GLY PHE LEU SER GLU LEU THR GLN GLN LEU SEQRES 3 A 114 ALA GLN ALA THR GLY LYS PRO PRO GLN TYR ILE ALA VAL SEQRES 4 A 114 HIS VAL VAL PRO ASP GLN LEU MET ALA PHE GLY GLY SER SEQRES 5 A 114 SER GLU PRO CYS ALA LEU CYS SER LEU HIS SER ILE GLY SEQRES 6 A 114 LYS ILE GLY GLY ALA GLN ASN ARG SER TYR SER LYS LEU SEQRES 7 A 114 LEU CYS GLY LEU LEU ALA GLU ARG LEU ARG ILE SER PRO SEQRES 8 A 114 ASP ARG VAL TYR ILE ASN TYR TYR ASP MET ASN ALA ALA SEQRES 9 A 114 ASN VAL GLY TRP ASN ASN SER THR PHE ALA SEQRES 1 B 114 PRO MET PHE ILE VAL ASN THR ASN VAL PRO ARG ALA SER SEQRES 2 B 114 VAL PRO ASP GLY PHE LEU SER GLU LEU THR GLN GLN LEU SEQRES 3 B 114 ALA GLN ALA THR GLY LYS PRO PRO GLN TYR ILE ALA VAL SEQRES 4 B 114 HIS VAL VAL PRO ASP GLN LEU MET ALA PHE GLY GLY SER SEQRES 5 B 114 SER GLU PRO CYS ALA LEU CYS SER LEU HIS SER ILE GLY SEQRES 6 B 114 LYS ILE GLY GLY ALA GLN ASN ARG SER TYR SER LYS LEU SEQRES 7 B 114 LEU CYS GLY LEU LEU ALA GLU ARG LEU ARG ILE SER PRO SEQRES 8 B 114 ASP ARG VAL TYR ILE ASN TYR TYR ASP MET ASN ALA ALA SEQRES 9 B 114 ASN VAL GLY TRP ASN ASN SER THR PHE ALA SEQRES 1 C 114 PRO MET PHE ILE VAL ASN THR ASN VAL PRO ARG ALA SER SEQRES 2 C 114 VAL PRO ASP GLY PHE LEU SER GLU LEU THR GLN GLN LEU SEQRES 3 C 114 ALA GLN ALA THR GLY LYS PRO PRO GLN TYR ILE ALA VAL SEQRES 4 C 114 HIS VAL VAL PRO ASP GLN LEU MET ALA PHE GLY GLY SER SEQRES 5 C 114 SER GLU PRO CYS ALA LEU CYS SER LEU HIS SER ILE GLY SEQRES 6 C 114 LYS ILE GLY GLY ALA GLN ASN ARG SER TYR SER LYS LEU SEQRES 7 C 114 LEU CYS GLY LEU LEU ALA GLU ARG LEU ARG ILE SER PRO SEQRES 8 C 114 ASP ARG VAL TYR ILE ASN TYR TYR ASP MET ASN ALA ALA SEQRES 9 C 114 ASN VAL GLY TRP ASN ASN SER THR PHE ALA HET CL A 201 1 HET CL A 202 1 HET MYC A 203 23 HET CL B 201 1 HET CL B 202 1 HET MYC B 203 23 HET CL C 201 1 HET CL C 202 1 HET CL C 203 1 HET CL C 204 1 HETNAM CL CHLORIDE ION HETNAM MYC 3,5,7-TRIHYDROXY-2-(3,4,5-TRIHYDROXYPHENYL)-4H-CHROMEN- HETNAM 2 MYC 4-ONE HETSYN MYC 2-(3,4,5-TRIHYDROXYPHENYL)-3,5,7-TRIHYDROXY-4H-1- HETSYN 2 MYC BENZOPYRAN-4-ONE; 3,3',4',5,5',7-HEXAHYDROXYFLAVONE; HETSYN 3 MYC MYRICETIN; CANNABISCETIN FORMUL 4 CL 8(CL 1-) FORMUL 6 MYC 2(C15 H10 O8) FORMUL 14 HOH *305(H2 O) HELIX 1 AA1 PRO A 10 VAL A 14 5 5 HELIX 2 AA2 GLY A 17 GLY A 31 1 15 HELIX 3 AA3 PRO A 33 TYR A 36 5 4 HELIX 4 AA4 GLY A 68 ARG A 88 1 21 HELIX 5 AA5 SER A 90 ASP A 92 5 3 HELIX 6 AA6 ASN A 102 ALA A 104 5 3 HELIX 7 AA7 PRO B 10 VAL B 14 5 5 HELIX 8 AA8 GLY B 17 GLY B 31 1 15 HELIX 9 AA9 PRO B 33 TYR B 36 5 4 HELIX 10 AB1 GLY B 68 ARG B 88 1 21 HELIX 11 AB2 SER B 90 ASP B 92 5 3 HELIX 12 AB3 ASN B 102 ALA B 104 5 3 HELIX 13 AB4 PRO C 10 VAL C 14 5 5 HELIX 14 AB5 GLY C 17 GLY C 31 1 15 HELIX 15 AB6 PRO C 33 TYR C 36 5 4 HELIX 16 AB7 GLY C 68 ARG C 88 1 21 HELIX 17 AB8 SER C 90 ASP C 92 5 3 HELIX 18 AB9 ASN C 102 ALA C 104 5 3 SHEET 1 AA1 7 SER B 111 THR B 112 0 SHEET 2 AA1 7 VAL B 106 TRP B 108 -1 N TRP B 108 O SER B 111 SHEET 3 AA1 7 VAL A 94 ASP A 100 -1 N ILE A 96 O GLY B 107 SHEET 4 AA1 7 ALA A 57 SER A 63 1 N CYS A 59 O TYR A 95 SHEET 5 AA1 7 MET A 2 THR A 7 -1 N ASN A 6 O LEU A 58 SHEET 6 AA1 7 ALA A 38 VAL A 42 1 O VAL A 42 N VAL A 5 SHEET 7 AA1 7 LEU C 46 PHE C 49 -1 O ALA C 48 N VAL A 39 SHEET 1 AA2 7 LEU A 46 PHE A 49 0 SHEET 2 AA2 7 ALA B 38 VAL B 42 -1 O VAL B 41 N LEU A 46 SHEET 3 AA2 7 MET B 2 THR B 7 1 N VAL B 5 O VAL B 42 SHEET 4 AA2 7 ALA B 57 SER B 63 -1 O LEU B 58 N ASN B 6 SHEET 5 AA2 7 VAL B 94 ASP B 100 1 O TYR B 95 N CYS B 59 SHEET 6 AA2 7 VAL C 106 TRP C 108 -1 O GLY C 107 N ILE B 96 SHEET 7 AA2 7 SER C 111 THR C 112 -1 O SER C 111 N TRP C 108 SHEET 1 AA3 7 SER A 111 THR A 112 0 SHEET 2 AA3 7 VAL A 106 TRP A 108 -1 N TRP A 108 O SER A 111 SHEET 3 AA3 7 VAL C 94 ASP C 100 -1 O ILE C 96 N GLY A 107 SHEET 4 AA3 7 ALA C 57 SER C 63 1 N CYS C 59 O TYR C 95 SHEET 5 AA3 7 MET C 2 THR C 7 -1 N ASN C 6 O LEU C 58 SHEET 6 AA3 7 ALA C 38 VAL C 42 1 O VAL C 42 N VAL C 5 SHEET 7 AA3 7 LEU B 46 PHE B 49 -1 N LEU B 46 O VAL C 41 SITE 1 AC1 3 GLY A 68 ALA A 70 GLN A 71 SITE 1 AC2 3 ASN A 102 ASN A 105 HOH C 345 SITE 1 AC3 16 LYS A 32 TYR A 36 ILE A 64 ALA A 103 SITE 2 AC3 16 PHE A 113 HOH A 360 HOH B 341 GLY C 17 SITE 3 AC3 16 SER C 20 GLU C 21 THR C 23 GLN C 24 SITE 4 AC3 16 PRO C 34 TYR C 95 HOH C 359 HOH C 373 SITE 1 AC4 3 HOH A 335 ASN B 102 ASN B 105 SITE 1 AC5 3 PRO B 1 ILE B 64 MYC B 203 SITE 1 AC6 15 GLY A 17 SER A 20 GLU A 21 GLN A 24 SITE 2 AC6 15 TYR A 95 HOH A 302 LYS B 32 TYR B 36 SITE 3 AC6 15 ILE B 64 ALA B 103 PHE B 113 CL B 202 SITE 4 AC6 15 HOH B 320 GLY C 50 GLY C 51 SITE 1 AC7 2 PRO C 1 ILE C 64 SITE 1 AC8 3 GLY C 68 ALA C 70 GLN C 71 SITE 1 AC9 2 ASN A 102 ALA A 103 SITE 1 AD1 3 HOH B 343 ASN C 102 ASN C 105 CRYST1 67.756 68.016 88.294 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014759 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014702 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011326 0.00000