data_7E4J # _entry.id 7E4J # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.354 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7E4J pdb_00007e4j 10.2210/pdb7e4j/pdb WWPDB D_1300020332 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7E4J _pdbx_database_status.recvd_initial_deposition_date 2021-02-13 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Pratap, S.' 1 ? 'Megta, A.K.' 2 ? 'Talwar, S.' 3 ? 'Chandresh, S.' 4 ? 'Pandey, A.K.' 5 ? 'Krishnan, V.' 6 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To be published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'X-ray crystal structure of VapB12 antitoxin from mycobacterium tuberculosis in space group P41.' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pratap, S.' 1 ? primary 'Megta, A.K.' 2 ? primary 'Talwar, S.' 3 ? primary 'Sharma, C.' 4 ? primary 'Pandey, A.K.' 5 ? primary 'Krishnan, V.' 6 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 7E4J _cell.details ? _cell.formula_units_Z ? _cell.length_a 34.660 _cell.length_a_esd ? _cell.length_b 34.660 _cell.length_b_esd ? _cell.length_c 162.227 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7E4J _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Antitoxin 4941.749 4 ? ? ? ? 2 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 3 water nat water 18.015 121 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Antitoxin VapB12,Conserved protein of uncharacterized function,possible antitoxin VapB12' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MSAMVQIRNVPDELLHELKARAAAQRMSLSDFLLARLAEIAEEP _entity_poly.pdbx_seq_one_letter_code_can MSAMVQIRNVPDELLHELKARAAAQRMSLSDFLLARLAEIAEEP _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 ALA n 1 4 MET n 1 5 VAL n 1 6 GLN n 1 7 ILE n 1 8 ARG n 1 9 ASN n 1 10 VAL n 1 11 PRO n 1 12 ASP n 1 13 GLU n 1 14 LEU n 1 15 LEU n 1 16 HIS n 1 17 GLU n 1 18 LEU n 1 19 LYS n 1 20 ALA n 1 21 ARG n 1 22 ALA n 1 23 ALA n 1 24 ALA n 1 25 GLN n 1 26 ARG n 1 27 MET n 1 28 SER n 1 29 LEU n 1 30 SER n 1 31 ASP n 1 32 PHE n 1 33 LEU n 1 34 LEU n 1 35 ALA n 1 36 ARG n 1 37 LEU n 1 38 ALA n 1 39 GLU n 1 40 ILE n 1 41 ALA n 1 42 GLU n 1 43 GLU n 1 44 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 44 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ;vapB12, AYJ03_009075, DSI38_08650, E5M52_14165, E5M78_13900, ERS007663_00684, ERS007665_03495, ERS007703_02236, ERS007720_02286, ERS007722_03650, ERS007741_00752, ERS013471_00074, ERS023446_02694, ERS027646_03040, ERS027659_01239, ERS027661_00782, ERS094182_03044, F6W99_00284, FRD82_02990, SAMEA2683035_01359 ; _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mycobacterium tuberculosis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1773 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ;Escherichia coli 'BL21-Gold(DE3)pLysS AG' ; _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 866768 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0A045KH53_MYCTX _struct_ref.pdbx_db_accession A0A045KH53 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code MSAMVQIRNVPDELLHELKARAAAQRMSLSDFLLARLAEIAEEP _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7E4J A 1 ? 44 ? A0A045KH53 1 ? 44 ? 1 44 2 1 7E4J B 1 ? 44 ? A0A045KH53 1 ? 44 ? 1 44 3 1 7E4J C 1 ? 44 ? A0A045KH53 1 ? 44 ? 1 44 4 1 7E4J D 1 ? 44 ? A0A045KH53 1 ? 44 ? 1 44 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7E4J _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.46 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 50.10 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.3 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2 M Ammonium Chloride:NaOH pH 6.3, 20% (w/v) PEG3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-07-10 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97951 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE ID29' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97951 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ID29 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 7E4J _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.63 _reflns.d_resolution_low 40.56 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 23505 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.0 _reflns.pdbx_Rmerge_I_obs 0.067 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 12.6 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.635 _reflns_shell.d_res_low 1.663 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.0 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1174 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.723 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 6.3 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.806 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -21.21 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] -0.00 _refine.aniso_B[2][2] -21.21 _refine.aniso_B[2][3] -0.00 _refine.aniso_B[3][3] 42.41 _refine.B_iso_max ? _refine.B_iso_mean 38.852 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.969 _refine.correlation_coeff_Fo_to_Fc_free 0.947 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7E4J _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.63 _refine.ls_d_res_low 40.56 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 22398 _refine.ls_number_reflns_R_free 1106 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.89 _refine.ls_percent_reflns_R_free 4.7 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.17400 _refine.ls_R_factor_R_free 0.21794 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.17177 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'AB INITIO PHASING' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.025 _refine.pdbx_overall_ESU_R_Free 0.020 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 3.816 _refine.overall_SU_ML 0.062 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.details ? _refine_hist.d_res_high 1.63 _refine_hist.d_res_low 40.56 _refine_hist.number_atoms_solvent 121 _refine_hist.number_atoms_total 1482 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1360 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.011 0.013 1382 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.017 1405 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.568 1.633 1857 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.273 1.578 3219 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.130 5.000 172 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 23.897 20.886 79 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 13.890 15.000 266 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 16.282 15.000 16 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.064 0.200 184 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 0.020 1524 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 296 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 2.518 3.041 700 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 2.512 3.034 699 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 3.190 4.541 868 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 3.189 4.550 869 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 2.909 3.571 682 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 2.907 3.578 683 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 3.800 5.202 990 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 4.879 37.496 1508 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 4.738 37.339 1497 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? 4.025 3.000 2786 ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # loop_ _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight _refine_ls_restr_ncs.pdbx_ens_id 'X-RAY DIFFRACTION' 1 ? ? 0.06 ? 0.05 1 'interatomic distance' ? A 1183 ? ? 1 'X-RAY DIFFRACTION' 2 ? ? 0.06 ? 0.05 2 'interatomic distance' ? B 1183 ? ? 1 'X-RAY DIFFRACTION' 1 ? ? 0.14 ? 0.05 3 'interatomic distance' ? A 1114 ? ? 2 'X-RAY DIFFRACTION' 2 ? ? 0.14 ? 0.05 4 'interatomic distance' ? C 1114 ? ? 2 'X-RAY DIFFRACTION' 1 ? ? 0.13 ? 0.05 5 'interatomic distance' ? A 1110 ? ? 3 'X-RAY DIFFRACTION' 2 ? ? 0.13 ? 0.05 6 'interatomic distance' ? D 1110 ? ? 3 'X-RAY DIFFRACTION' 1 ? ? 0.13 ? 0.05 7 'interatomic distance' ? B 1110 ? ? 4 'X-RAY DIFFRACTION' 2 ? ? 0.13 ? 0.05 8 'interatomic distance' ? C 1110 ? ? 4 'X-RAY DIFFRACTION' 1 ? ? 0.13 ? 0.05 9 'interatomic distance' ? B 1113 ? ? 5 'X-RAY DIFFRACTION' 2 ? ? 0.13 ? 0.05 10 'interatomic distance' ? D 1113 ? ? 5 'X-RAY DIFFRACTION' 1 ? ? 0.07 ? 0.05 11 'interatomic distance' ? C 1163 ? ? 6 'X-RAY DIFFRACTION' 2 ? ? 0.07 ? 0.05 12 'interatomic distance' ? D 1163 ? ? 6 # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.635 _refine_ls_shell.d_res_low 1.677 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 91 _refine_ls_shell.number_reflns_R_work 1612 _refine_ls_shell.percent_reflns_obs 99.59 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.286 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.190 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # loop_ _struct_ncs_dom.id _struct_ncs_dom.details _struct_ncs_dom.pdbx_ens_id 1 A 1 2 B 1 1 A 2 2 C 2 1 A 3 2 D 3 1 B 4 2 C 4 1 B 5 2 D 5 1 C 6 2 D 6 # loop_ _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.selection_details 1 A 1 A 44 0 0 ? ? ? ? ? ? ? ? 1 ? 2 B 1 B 44 0 0 ? ? ? ? ? ? ? ? 1 ? 1 A 1 A 44 0 0 ? ? ? ? ? ? ? ? 2 ? 2 C 1 C 44 0 0 ? ? ? ? ? ? ? ? 2 ? 1 A 1 A 44 0 0 ? ? ? ? ? ? ? ? 3 ? 2 D 1 D 44 0 0 ? ? ? ? ? ? ? ? 3 ? 1 B 1 B 44 0 0 ? ? ? ? ? ? ? ? 4 ? 2 C 1 C 44 0 0 ? ? ? ? ? ? ? ? 4 ? 1 B 1 B 44 0 0 ? ? ? ? ? ? ? ? 5 ? 2 D 1 D 44 0 0 ? ? ? ? ? ? ? ? 5 ? 1 C 1 C 44 0 0 ? ? ? ? ? ? ? ? 6 ? 2 D 1 D 44 0 0 ? ? ? ? ? ? ? ? 6 ? # loop_ _struct_ncs_ens.id _struct_ncs_ens.details 1 ? 2 ? 3 ? 4 ? 5 ? 6 ? # _struct.entry_id 7E4J _struct.title 'X-ray crystal structure of VapB12 antitoxin from mycobacterium tuberculosis in space group P41.' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7E4J _struct_keywords.text 'VapBC12, Toxin-antitoxin, Cholesterol, ANTITOXIN' _struct_keywords.pdbx_keywords ANTITOXIN # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 12 ? GLN A 25 ? ASP A 12 GLN A 25 1 ? 14 HELX_P HELX_P2 AA2 SER A 28 ? GLU A 43 ? SER A 28 GLU A 43 1 ? 16 HELX_P HELX_P3 AA3 ASP B 12 ? GLN B 25 ? ASP B 12 GLN B 25 1 ? 14 HELX_P HELX_P4 AA4 SER B 28 ? GLU B 43 ? SER B 28 GLU B 43 1 ? 16 HELX_P HELX_P5 AA5 ASP C 12 ? GLN C 25 ? ASP C 12 GLN C 25 1 ? 14 HELX_P HELX_P6 AA6 SER C 28 ? GLU C 43 ? SER C 28 GLU C 43 1 ? 16 HELX_P HELX_P7 AA7 ASP D 12 ? GLN D 25 ? ASP D 12 GLN D 25 1 ? 14 HELX_P HELX_P8 AA8 SER D 28 ? GLU D 43 ? SER D 28 GLU D 43 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASP 12 OD1 ? ? ? 1_555 E ZN . ZN ? ? A ASP 12 B ZN 101 4_564 ? ? ? ? ? ? ? 2.201 ? ? metalc2 metalc ? ? A ASP 12 OD2 ? ? ? 1_555 E ZN . ZN ? ? A ASP 12 B ZN 101 4_564 ? ? ? ? ? ? ? 1.983 ? ? metalc3 metalc ? ? A HIS 16 NE2 ? ? ? 1_555 E ZN . ZN ? ? A HIS 16 B ZN 101 4_564 ? ? ? ? ? ? ? 2.260 ? ? metalc4 metalc ? ? B ASP 12 OD1 ? ? ? 1_555 E ZN . ZN ? ? B ASP 12 B ZN 101 1_555 ? ? ? ? ? ? ? 1.883 ? ? metalc5 metalc ? ? B HIS 16 NE2 ? ? ? 1_555 E ZN . ZN ? ? B HIS 16 B ZN 101 1_555 ? ? ? ? ? ? ? 2.028 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER A 2 ? PRO A 11 ? SER A 2 PRO A 11 AA1 2 SER C 2 ? PRO C 11 ? SER C 2 PRO C 11 AA2 1 SER B 2 ? PRO B 11 ? SER B 2 PRO B 11 AA2 2 SER D 2 ? PRO D 11 ? SER D 2 PRO D 11 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 5 ? N VAL A 5 O ILE C 7 ? O ILE C 7 AA2 1 2 N ILE B 7 ? N ILE B 7 O VAL D 5 ? O VAL D 5 # _atom_sites.entry_id 7E4J _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.028852 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.028852 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006164 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 ALA 3 3 3 ALA ALA A . n A 1 4 MET 4 4 4 MET MET A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 GLN 6 6 6 GLN GLN A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 ASN 9 9 9 ASN ASN A . n A 1 10 VAL 10 10 10 VAL VAL A . n A 1 11 PRO 11 11 11 PRO PRO A . n A 1 12 ASP 12 12 12 ASP ASP A . n A 1 13 GLU 13 13 13 GLU GLU A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 HIS 16 16 16 HIS HIS A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 GLN 25 25 25 GLN GLN A . n A 1 26 ARG 26 26 26 ARG ARG A . n A 1 27 MET 27 27 27 MET MET A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 ASP 31 31 31 ASP ASP A . n A 1 32 PHE 32 32 32 PHE PHE A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 ARG 36 36 36 ARG ARG A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 ILE 40 40 40 ILE ILE A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 GLU 42 42 42 GLU GLU A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 PRO 44 44 44 PRO PRO A . n B 1 1 MET 1 1 1 MET MET B . n B 1 2 SER 2 2 2 SER SER B . n B 1 3 ALA 3 3 3 ALA ALA B . n B 1 4 MET 4 4 4 MET MET B . n B 1 5 VAL 5 5 5 VAL VAL B . n B 1 6 GLN 6 6 6 GLN GLN B . n B 1 7 ILE 7 7 7 ILE ILE B . n B 1 8 ARG 8 8 8 ARG ARG B . n B 1 9 ASN 9 9 9 ASN ASN B . n B 1 10 VAL 10 10 10 VAL VAL B . n B 1 11 PRO 11 11 11 PRO PRO B . n B 1 12 ASP 12 12 12 ASP ASP B . n B 1 13 GLU 13 13 13 GLU GLU B . n B 1 14 LEU 14 14 14 LEU LEU B . n B 1 15 LEU 15 15 15 LEU LEU B . n B 1 16 HIS 16 16 16 HIS HIS B . n B 1 17 GLU 17 17 17 GLU GLU B . n B 1 18 LEU 18 18 18 LEU LEU B . n B 1 19 LYS 19 19 19 LYS LYS B . n B 1 20 ALA 20 20 20 ALA ALA B . n B 1 21 ARG 21 21 21 ARG ARG B . n B 1 22 ALA 22 22 22 ALA ALA B . n B 1 23 ALA 23 23 23 ALA ALA B . n B 1 24 ALA 24 24 24 ALA ALA B . n B 1 25 GLN 25 25 25 GLN GLN B . n B 1 26 ARG 26 26 26 ARG ARG B . n B 1 27 MET 27 27 27 MET MET B . n B 1 28 SER 28 28 28 SER SER B . n B 1 29 LEU 29 29 29 LEU LEU B . n B 1 30 SER 30 30 30 SER SER B . n B 1 31 ASP 31 31 31 ASP ASP B . n B 1 32 PHE 32 32 32 PHE PHE B . n B 1 33 LEU 33 33 33 LEU LEU B . n B 1 34 LEU 34 34 34 LEU LEU B . n B 1 35 ALA 35 35 35 ALA ALA B . n B 1 36 ARG 36 36 36 ARG ARG B . n B 1 37 LEU 37 37 37 LEU LEU B . n B 1 38 ALA 38 38 38 ALA ALA B . n B 1 39 GLU 39 39 39 GLU GLU B . n B 1 40 ILE 40 40 40 ILE ILE B . n B 1 41 ALA 41 41 41 ALA ALA B . n B 1 42 GLU 42 42 42 GLU GLU B . n B 1 43 GLU 43 43 43 GLU GLU B . n B 1 44 PRO 44 44 44 PRO PRO B . n C 1 1 MET 1 1 1 MET MET C . n C 1 2 SER 2 2 2 SER SER C . n C 1 3 ALA 3 3 3 ALA ALA C . n C 1 4 MET 4 4 4 MET MET C . n C 1 5 VAL 5 5 5 VAL VAL C . n C 1 6 GLN 6 6 6 GLN GLN C . n C 1 7 ILE 7 7 7 ILE ILE C . n C 1 8 ARG 8 8 8 ARG ARG C . n C 1 9 ASN 9 9 9 ASN ASN C . n C 1 10 VAL 10 10 10 VAL VAL C . n C 1 11 PRO 11 11 11 PRO PRO C . n C 1 12 ASP 12 12 12 ASP ASP C . n C 1 13 GLU 13 13 13 GLU GLU C . n C 1 14 LEU 14 14 14 LEU LEU C . n C 1 15 LEU 15 15 15 LEU LEU C . n C 1 16 HIS 16 16 16 HIS HIS C . n C 1 17 GLU 17 17 17 GLU GLU C . n C 1 18 LEU 18 18 18 LEU LEU C . n C 1 19 LYS 19 19 19 LYS LYS C . n C 1 20 ALA 20 20 20 ALA ALA C . n C 1 21 ARG 21 21 21 ARG ARG C . n C 1 22 ALA 22 22 22 ALA ALA C . n C 1 23 ALA 23 23 23 ALA ALA C . n C 1 24 ALA 24 24 24 ALA ALA C . n C 1 25 GLN 25 25 25 GLN GLN C . n C 1 26 ARG 26 26 26 ARG ARG C . n C 1 27 MET 27 27 27 MET MET C . n C 1 28 SER 28 28 28 SER SER C . n C 1 29 LEU 29 29 29 LEU LEU C . n C 1 30 SER 30 30 30 SER SER C . n C 1 31 ASP 31 31 31 ASP ASP C . n C 1 32 PHE 32 32 32 PHE PHE C . n C 1 33 LEU 33 33 33 LEU LEU C . n C 1 34 LEU 34 34 34 LEU LEU C . n C 1 35 ALA 35 35 35 ALA ALA C . n C 1 36 ARG 36 36 36 ARG ARG C . n C 1 37 LEU 37 37 37 LEU LEU C . n C 1 38 ALA 38 38 38 ALA ALA C . n C 1 39 GLU 39 39 39 GLU GLU C . n C 1 40 ILE 40 40 40 ILE ILE C . n C 1 41 ALA 41 41 41 ALA ALA C . n C 1 42 GLU 42 42 42 GLU GLU C . n C 1 43 GLU 43 43 43 GLU GLU C . n C 1 44 PRO 44 44 44 PRO PRO C . n D 1 1 MET 1 1 1 MET MET D . n D 1 2 SER 2 2 2 SER SER D . n D 1 3 ALA 3 3 3 ALA ALA D . n D 1 4 MET 4 4 4 MET MET D . n D 1 5 VAL 5 5 5 VAL VAL D . n D 1 6 GLN 6 6 6 GLN GLN D . n D 1 7 ILE 7 7 7 ILE ILE D . n D 1 8 ARG 8 8 8 ARG ARG D . n D 1 9 ASN 9 9 9 ASN ASN D . n D 1 10 VAL 10 10 10 VAL VAL D . n D 1 11 PRO 11 11 11 PRO PRO D . n D 1 12 ASP 12 12 12 ASP ASP D . n D 1 13 GLU 13 13 13 GLU GLU D . n D 1 14 LEU 14 14 14 LEU LEU D . n D 1 15 LEU 15 15 15 LEU LEU D . n D 1 16 HIS 16 16 16 HIS HIS D . n D 1 17 GLU 17 17 17 GLU GLU D . n D 1 18 LEU 18 18 18 LEU LEU D . n D 1 19 LYS 19 19 19 LYS LYS D . n D 1 20 ALA 20 20 20 ALA ALA D . n D 1 21 ARG 21 21 21 ARG ARG D . n D 1 22 ALA 22 22 22 ALA ALA D . n D 1 23 ALA 23 23 23 ALA ALA D . n D 1 24 ALA 24 24 24 ALA ALA D . n D 1 25 GLN 25 25 25 GLN GLN D . n D 1 26 ARG 26 26 26 ARG ARG D . n D 1 27 MET 27 27 27 MET MET D . n D 1 28 SER 28 28 28 SER SER D . n D 1 29 LEU 29 29 29 LEU LEU D . n D 1 30 SER 30 30 30 SER SER D . n D 1 31 ASP 31 31 31 ASP ASP D . n D 1 32 PHE 32 32 32 PHE PHE D . n D 1 33 LEU 33 33 33 LEU LEU D . n D 1 34 LEU 34 34 34 LEU LEU D . n D 1 35 ALA 35 35 35 ALA ALA D . n D 1 36 ARG 36 36 36 ARG ARG D . n D 1 37 LEU 37 37 37 LEU LEU D . n D 1 38 ALA 38 38 38 ALA ALA D . n D 1 39 GLU 39 39 39 GLU GLU D . n D 1 40 ILE 40 40 40 ILE ILE D . n D 1 41 ALA 41 41 41 ALA ALA D . n D 1 42 GLU 42 42 42 GLU GLU D . n D 1 43 GLU 43 43 43 GLU GLU D . n D 1 44 PRO 44 44 44 PRO PRO D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ZN 1 101 101 ZN ZN B . F 3 HOH 1 101 121 HOH HOH A . F 3 HOH 2 102 120 HOH HOH A . F 3 HOH 3 103 7 HOH HOH A . F 3 HOH 4 104 49 HOH HOH A . F 3 HOH 5 105 26 HOH HOH A . F 3 HOH 6 106 131 HOH HOH A . F 3 HOH 7 107 6 HOH HOH A . F 3 HOH 8 108 38 HOH HOH A . F 3 HOH 9 109 94 HOH HOH A . F 3 HOH 10 110 40 HOH HOH A . F 3 HOH 11 111 30 HOH HOH A . F 3 HOH 12 112 21 HOH HOH A . F 3 HOH 13 113 31 HOH HOH A . F 3 HOH 14 114 36 HOH HOH A . F 3 HOH 15 115 12 HOH HOH A . F 3 HOH 16 116 117 HOH HOH A . F 3 HOH 17 117 39 HOH HOH A . F 3 HOH 18 118 44 HOH HOH A . F 3 HOH 19 119 10 HOH HOH A . F 3 HOH 20 120 25 HOH HOH A . F 3 HOH 21 121 114 HOH HOH A . F 3 HOH 22 122 82 HOH HOH A . F 3 HOH 23 123 62 HOH HOH A . F 3 HOH 24 124 4 HOH HOH A . F 3 HOH 25 125 5 HOH HOH A . F 3 HOH 26 126 9 HOH HOH A . F 3 HOH 27 127 24 HOH HOH A . F 3 HOH 28 128 123 HOH HOH A . F 3 HOH 29 129 80 HOH HOH A . F 3 HOH 30 130 102 HOH HOH A . F 3 HOH 31 131 91 HOH HOH A . F 3 HOH 32 132 101 HOH HOH A . F 3 HOH 33 133 72 HOH HOH A . F 3 HOH 34 134 46 HOH HOH A . G 3 HOH 1 201 95 HOH HOH B . G 3 HOH 2 202 41 HOH HOH B . G 3 HOH 3 203 58 HOH HOH B . G 3 HOH 4 204 113 HOH HOH B . G 3 HOH 5 205 29 HOH HOH B . G 3 HOH 6 206 86 HOH HOH B . G 3 HOH 7 207 45 HOH HOH B . G 3 HOH 8 208 64 HOH HOH B . G 3 HOH 9 209 20 HOH HOH B . G 3 HOH 10 210 11 HOH HOH B . G 3 HOH 11 211 23 HOH HOH B . G 3 HOH 12 212 54 HOH HOH B . G 3 HOH 13 213 2 HOH HOH B . G 3 HOH 14 214 8 HOH HOH B . G 3 HOH 15 215 32 HOH HOH B . G 3 HOH 16 216 1 HOH HOH B . G 3 HOH 17 217 18 HOH HOH B . G 3 HOH 18 218 99 HOH HOH B . G 3 HOH 19 219 112 HOH HOH B . G 3 HOH 20 220 132 HOH HOH B . G 3 HOH 21 221 125 HOH HOH B . G 3 HOH 22 222 3 HOH HOH B . G 3 HOH 23 223 77 HOH HOH B . G 3 HOH 24 224 109 HOH HOH B . G 3 HOH 25 225 67 HOH HOH B . G 3 HOH 26 226 55 HOH HOH B . G 3 HOH 27 227 130 HOH HOH B . G 3 HOH 28 228 75 HOH HOH B . G 3 HOH 29 229 108 HOH HOH B . G 3 HOH 30 230 76 HOH HOH B . H 3 HOH 1 101 118 HOH HOH C . H 3 HOH 2 102 35 HOH HOH C . H 3 HOH 3 103 122 HOH HOH C . H 3 HOH 4 104 68 HOH HOH C . H 3 HOH 5 105 61 HOH HOH C . H 3 HOH 6 106 60 HOH HOH C . H 3 HOH 7 107 92 HOH HOH C . H 3 HOH 8 108 126 HOH HOH C . H 3 HOH 9 109 134 HOH HOH C . H 3 HOH 10 110 28 HOH HOH C . H 3 HOH 11 111 74 HOH HOH C . H 3 HOH 12 112 98 HOH HOH C . H 3 HOH 13 113 15 HOH HOH C . H 3 HOH 14 114 129 HOH HOH C . H 3 HOH 15 115 119 HOH HOH C . H 3 HOH 16 116 19 HOH HOH C . H 3 HOH 17 117 128 HOH HOH C . H 3 HOH 18 118 27 HOH HOH C . H 3 HOH 19 119 93 HOH HOH C . H 3 HOH 20 120 133 HOH HOH C . H 3 HOH 21 121 63 HOH HOH C . H 3 HOH 22 122 81 HOH HOH C . H 3 HOH 23 123 57 HOH HOH C . H 3 HOH 24 124 53 HOH HOH C . H 3 HOH 25 125 97 HOH HOH C . H 3 HOH 26 126 65 HOH HOH C . H 3 HOH 27 127 100 HOH HOH C . H 3 HOH 28 128 84 HOH HOH C . I 3 HOH 1 101 16 HOH HOH D . I 3 HOH 2 102 69 HOH HOH D . I 3 HOH 3 103 87 HOH HOH D . I 3 HOH 4 104 52 HOH HOH D . I 3 HOH 5 105 111 HOH HOH D . I 3 HOH 6 106 85 HOH HOH D . I 3 HOH 7 107 47 HOH HOH D . I 3 HOH 8 108 33 HOH HOH D . I 3 HOH 9 109 13 HOH HOH D . I 3 HOH 10 110 124 HOH HOH D . I 3 HOH 11 111 14 HOH HOH D . I 3 HOH 12 112 42 HOH HOH D . I 3 HOH 13 113 70 HOH HOH D . I 3 HOH 14 114 43 HOH HOH D . I 3 HOH 15 115 83 HOH HOH D . I 3 HOH 16 116 48 HOH HOH D . I 3 HOH 17 117 59 HOH HOH D . I 3 HOH 18 118 127 HOH HOH D . I 3 HOH 19 119 116 HOH HOH D . I 3 HOH 20 120 110 HOH HOH D . I 3 HOH 21 121 34 HOH HOH D . I 3 HOH 22 122 135 HOH HOH D . I 3 HOH 23 123 73 HOH HOH D . I 3 HOH 24 124 66 HOH HOH D . I 3 HOH 25 125 103 HOH HOH D . I 3 HOH 26 126 22 HOH HOH D . I 3 HOH 27 127 105 HOH HOH D . I 3 HOH 28 128 107 HOH HOH D . I 3 HOH 29 129 104 HOH HOH D . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,F,H 2 1 B,D,E,G,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3020 ? 1 MORE -23 ? 1 'SSA (A^2)' 5700 ? 2 'ABSA (A^2)' 2960 ? 2 MORE -23 ? 2 'SSA (A^2)' 5620 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 12 ? A ASP 12 ? 1_555 ZN ? E ZN . ? B ZN 101 ? 4_564 OD2 ? A ASP 12 ? A ASP 12 ? 1_555 65.1 ? 2 OD1 ? A ASP 12 ? A ASP 12 ? 1_555 ZN ? E ZN . ? B ZN 101 ? 4_564 NE2 ? A HIS 16 ? A HIS 16 ? 1_555 105.2 ? 3 OD2 ? A ASP 12 ? A ASP 12 ? 1_555 ZN ? E ZN . ? B ZN 101 ? 4_564 NE2 ? A HIS 16 ? A HIS 16 ? 1_555 104.7 ? 4 OD1 ? A ASP 12 ? A ASP 12 ? 1_555 ZN ? E ZN . ? B ZN 101 ? 4_564 OD1 ? B ASP 12 ? B ASP 12 ? 1_555 102.5 ? 5 OD2 ? A ASP 12 ? A ASP 12 ? 1_555 ZN ? E ZN . ? B ZN 101 ? 4_564 OD1 ? B ASP 12 ? B ASP 12 ? 1_555 82.6 ? 6 NE2 ? A HIS 16 ? A HIS 16 ? 1_555 ZN ? E ZN . ? B ZN 101 ? 4_564 OD1 ? B ASP 12 ? B ASP 12 ? 1_555 23.2 ? 7 OD1 ? A ASP 12 ? A ASP 12 ? 1_555 ZN ? E ZN . ? B ZN 101 ? 4_564 NE2 ? B HIS 16 ? B HIS 16 ? 1_555 98.9 ? 8 OD2 ? A ASP 12 ? A ASP 12 ? 1_555 ZN ? E ZN . ? B ZN 101 ? 4_564 NE2 ? B HIS 16 ? B HIS 16 ? 1_555 80.4 ? 9 NE2 ? A HIS 16 ? A HIS 16 ? 1_555 ZN ? E ZN . ? B ZN 101 ? 4_564 NE2 ? B HIS 16 ? B HIS 16 ? 1_555 24.8 ? 10 OD1 ? B ASP 12 ? B ASP 12 ? 1_555 ZN ? E ZN . ? B ZN 101 ? 4_564 NE2 ? B HIS 16 ? B HIS 16 ? 1_555 3.6 ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2022-02-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 16.2503 19.9356 11.0760 0.1135 ? -0.0062 ? -0.0523 ? 0.1814 ? 0.0098 ? 0.0513 ? 1.2849 ? 0.2416 ? 1.9067 ? 0.2151 ? 0.5128 ? 3.4560 ? -0.2000 ? 0.1707 ? 0.2434 ? 0.0001 ? -0.1198 ? 0.0579 ? -0.0614 ? 0.2492 ? 0.3199 ? 2 'X-RAY DIFFRACTION' ? refined 3.3109 10.8772 8.1223 0.0563 ? -0.0002 ? 0.0057 ? 0.0579 ? 0.0011 ? 0.0161 ? 0.0132 ? 0.1001 ? 0.0004 ? 0.8149 ? -0.0013 ? 0.0006 ? -0.0062 ? -0.0016 ? -0.0020 ? -0.0403 ? 0.0027 ? -0.0414 ? 0.0017 ? -0.0014 ? 0.0035 ? 3 'X-RAY DIFFRACTION' ? refined 13.5469 7.5041 15.3337 0.0668 ? 0.0117 ? -0.0087 ? 0.0632 ? -0.0086 ? 0.0437 ? 1.1572 ? 0.3394 ? 0.3600 ? 0.2844 ? 0.3614 ? 0.4783 ? 0.0247 ? 0.0270 ? -0.0866 ? 0.0229 ? 0.0370 ? -0.0346 ? 0.0418 ? 0.0618 ? -0.0616 ? 4 'X-RAY DIFFRACTION' ? refined 1.1757 2.6444 29.0761 0.0630 ? 0.0055 ? -0.0049 ? 0.0616 ? -0.0162 ? 0.0254 ? 0.8995 ? -0.3666 ? 1.6610 ? 0.2850 ? -0.9285 ? 4.0355 ? -0.1049 ? -0.1082 ? 0.1064 ? 0.0551 ? 0.0110 ? -0.0197 ? -0.1862 ? -0.1853 ? 0.0940 ? 5 'X-RAY DIFFRACTION' ? refined 14.0914 -6.5244 31.9057 0.0810 ? -0.0004 ? -0.0218 ? 0.0602 ? -0.0063 ? 0.0570 ? 0.5355 ? -0.1694 ? -0.2870 ? 0.1100 ? 0.0967 ? 0.1568 ? 0.0052 ? 0.0189 ? 0.0093 ? 0.0367 ? 0.0019 ? -0.0575 ? 0.0110 ? -0.0176 ? -0.0072 ? 6 'X-RAY DIFFRACTION' ? refined 3.8059 -9.7877 24.8382 0.0632 ? -0.0066 ? 0.0023 ? 0.0607 ? -0.0014 ? 0.0070 ? 0.5330 ? -0.4985 ? 0.2497 ? 0.5135 ? -0.3138 ? 0.2537 ? -0.0164 ? 0.0135 ? -0.0276 ? 0.0006 ? 0.0179 ? 0.0181 ? 0.0175 ? -0.0450 ? -0.0015 ? 7 'X-RAY DIFFRACTION' ? refined 11.8679 19.4031 11.5873 0.0597 ? -0.0097 ? -0.0019 ? 0.0715 ? 0.0019 ? 0.0006 ? 1.8577 ? -0.8062 ? 2.0612 ? 0.5390 ? -0.4593 ? 3.3026 ? 0.0239 ? 0.0870 ? 0.0127 ? -0.0290 ? -0.0584 ? 0.0037 ? -0.0041 ? 0.0190 ? 0.0346 ? 8 'X-RAY DIFFRACTION' ? refined 25.8361 11.7276 12.9184 0.0392 ? 0.0025 ? 0.0073 ? 0.0548 ? 0.0027 ? 0.0316 ? 0.8030 ? 0.0430 ? -0.8820 ? 0.5096 ? -0.0192 ? 0.9722 ? -0.0207 ? 0.0110 ? -0.0443 ? 0.0197 ? -0.0249 ? -0.0036 ? 0.0215 ? -0.0046 ? 0.0456 ? 9 'X-RAY DIFFRACTION' ? refined 15.7256 8.8567 5.9822 0.0790 ? -0.0022 ? -0.0041 ? 0.0585 ? -0.0026 ? 0.0101 ? 3.2183 ? 0.0150 ? -0.4902 ? 1.9531 ? -0.5171 ? 0.2110 ? -0.0264 ? 0.0562 ? -0.1753 ? -0.0606 ? 0.0028 ? 0.0176 ? 0.0142 ? -0.0063 ? 0.0236 ? 10 'X-RAY DIFFRACTION' ? refined 5.6894 2.1127 28.5260 0.0644 ? 0.0232 ? -0.0171 ? 0.0529 ? -0.0090 ? 0.0516 ? 2.1683 ? 0.4414 ? 1.4552 ? 0.4242 ? -0.3887 ? 2.3850 ? -0.1319 ? -0.1547 ? 0.1570 ? 0.0305 ? -0.0481 ? -0.0010 ? -0.2225 ? -0.0734 ? 0.1800 ? 11 'X-RAY DIFFRACTION' ? refined -8.4689 -5.6530 27.4934 0.0907 ? 0.0025 ? -0.0117 ? 0.0549 ? -0.0000 ? 0.0194 ? 0.6722 ? 0.2885 ? -0.6085 ? 0.1249 ? -0.2596 ? 0.5532 ? 0.0496 ? 0.0079 ? 0.0532 ? 0.0304 ? 0.0041 ? 0.0196 ? -0.0332 ? -0.0094 ? -0.0537 ? 12 'X-RAY DIFFRACTION' ? refined 1.5181 -8.4056 34.3229 0.0579 ? -0.0017 ? -0.0056 ? 0.0610 ? -0.0088 ? 0.0187 ? 2.6536 ? 0.4694 ? 0.7460 ? 0.0833 ? 0.1468 ? 1.1321 ? 0.0291 ? 0.0073 ? -0.1938 ? 0.0049 ? -0.0013 ? -0.0334 ? -0.0045 ? 0.0433 ? -0.0277 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 1 ? ? ? A 11 ? ? ? 2 'X-RAY DIFFRACTION' 2 ? ? A 12 ? ? ? A 28 ? ? ? 3 'X-RAY DIFFRACTION' 3 ? ? A 29 ? ? ? A 44 ? ? ? 4 'X-RAY DIFFRACTION' 4 ? ? B 1 ? ? ? B 11 ? ? ? 5 'X-RAY DIFFRACTION' 5 ? ? B 12 ? ? ? B 28 ? ? ? 6 'X-RAY DIFFRACTION' 6 ? ? B 29 ? ? ? B 44 ? ? ? 7 'X-RAY DIFFRACTION' 7 ? ? C 1 ? ? ? C 11 ? ? ? 8 'X-RAY DIFFRACTION' 8 ? ? C 12 ? ? ? C 28 ? ? ? 9 'X-RAY DIFFRACTION' 9 ? ? C 29 ? ? ? C 44 ? ? ? 10 'X-RAY DIFFRACTION' 10 ? ? D 1 ? ? ? D 11 ? ? ? 11 'X-RAY DIFFRACTION' 11 ? ? D 12 ? ? ? D 28 ? ? ? 12 'X-RAY DIFFRACTION' 12 ? ? D 29 ? ? ? D 44 ? ? ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0267 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELXDE ? ? ? . 4 # _pdbx_entry_details.entry_id 7E4J _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? B HOH 229 ? 6.04 . 2 1 O ? B HOH 230 ? 6.78 . 3 1 O ? D HOH 128 ? 5.92 . 4 1 O ? D HOH 129 ? 5.98 . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B GLU 43 ? CG ? B GLU 43 CG 2 1 Y 1 B GLU 43 ? CD ? B GLU 43 CD 3 1 Y 1 B GLU 43 ? OE1 ? B GLU 43 OE1 4 1 Y 1 B GLU 43 ? OE2 ? B GLU 43 OE2 5 1 Y 1 D GLU 13 ? CG ? D GLU 13 CG 6 1 Y 1 D GLU 13 ? CD ? D GLU 13 CD 7 1 Y 1 D GLU 13 ? OE1 ? D GLU 13 OE1 8 1 Y 1 D GLU 13 ? OE2 ? D GLU 13 OE2 9 1 Y 1 D GLU 42 ? CG ? D GLU 42 CG 10 1 Y 1 D GLU 42 ? CD ? D GLU 42 CD 11 1 Y 1 D GLU 42 ? OE1 ? D GLU 42 OE1 12 1 Y 1 D GLU 42 ? OE2 ? D GLU 42 OE2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 water HOH # loop_ _pdbx_reflns_twin.domain_id _pdbx_reflns_twin.crystal_id _pdbx_reflns_twin.diffrn_id _pdbx_reflns_twin.type _pdbx_reflns_twin.operator _pdbx_reflns_twin.fraction 1 1 1 ? 'H, K, L' 0.514 2 1 1 ? '-K, -H, -L' 0.486 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support homology _pdbx_struct_assembly_auth_evidence.details ? #