HEADER TRANSFERASE 14-FEB-21 7E4L TITLE CONVERSION OF PYROPHOSPHATE-DEPENDENT MYO-INOSITOL-1 KINASE INTO MYO- TITLE 2 INOSITOL-3 KINASE BY N78L/S89L MUTATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PFKB DOMAIN-CONTAINING PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PYROPHOSPHATE-DEPENDENT MYO-INOSITOL-1 KINASE; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA (STRAIN ATCC 43589 / MSB8 / SOURCE 3 DSM 3109 / JCM 10099); SOURCE 4 ORGANISM_TAXID: 243274; SOURCE 5 GENE: TMARI_0412; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-15B KEYWDS PYROPHOSPHATE-DEPENDENT KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR R.TASHIRO,K.MIKI,M.FUJIHASHI REVDAT 3 29-NOV-23 7E4L 1 REMARK REVDAT 2 02-JUN-21 7E4L 1 JRNL REVDAT 1 05-MAY-21 7E4L 0 JRNL AUTH R.TASHIRO,T.SATO,H.ATOMI,K.MIKI,M.FUJIHASHI JRNL TITL ALTERING THE PHOSPHORYLATION POSITION OF JRNL TITL 2 PYROPHOSPHATE-DEPENDENT MYO -INOSITOL-1-KINASE BASED ON ITS JRNL TITL 3 CRYSTAL STRUCTURE. JRNL REF ACS CHEM.BIOL. V. 16 794 2021 JRNL REFN ESSN 1554-8937 JRNL PMID 33877806 JRNL DOI 10.1021/ACSCHEMBIO.0C00733 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.65 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 65.4 REMARK 3 NUMBER OF REFLECTIONS : 41534 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2173 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4459 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.47 REMARK 3 BIN R VALUE (WORKING SET) : 0.2180 REMARK 3 BIN FREE R VALUE SET COUNT : 218 REMARK 3 BIN FREE R VALUE : 0.2630 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4266 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 193 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.56 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.27000 REMARK 3 B22 (A**2) : -0.33000 REMARK 3 B33 (A**2) : 0.87000 REMARK 3 B12 (A**2) : 0.21000 REMARK 3 B13 (A**2) : 0.15000 REMARK 3 B23 (A**2) : 0.32000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.158 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.133 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4399 ; 0.005 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 4176 ; 0.036 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5958 ; 1.304 ; 1.642 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9582 ; 2.307 ; 1.578 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 559 ; 6.864 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 210 ;30.024 ;20.952 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 728 ;11.658 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 31 ;11.990 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 584 ; 0.057 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4939 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1027 ; 0.007 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2233 ; 0.894 ; 1.607 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2232 ; 0.893 ; 1.606 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2790 ; 1.513 ; 2.407 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2791 ; 1.513 ; 2.407 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2166 ; 1.047 ; 1.723 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2164 ; 1.048 ; 1.724 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3168 ; 1.689 ; 2.537 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4755 ; 3.233 ;18.568 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4744 ; 3.218 ;18.527 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 7E4L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-FEB-21. REMARK 100 THE DEPOSITION ID IS D_1300020734. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-NOV-19 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : AR-NE3A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43707 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 62.5 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.58 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 9.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: 5YSP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 26% (W/V) POLY(ETHYLENE GLYCOL) 4000, REMARK 280 2MM AMMONIUM SULFATE, 100MM SODIUM ACETATE BUFFER (PH 5.4), REMARK 280 VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 90 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 79 REMARK 465 TYR A 80 REMARK 465 GLY A 81 REMARK 465 SER A 82 REMARK 465 ASP A 83 REMARK 465 PRO A 84 REMARK 465 ASP A 85 REMARK 465 THR A 86 REMARK 465 ARG B 79 REMARK 465 TYR B 80 REMARK 465 GLY B 81 REMARK 465 SER B 82 REMARK 465 ASP B 83 REMARK 465 PRO B 84 REMARK 465 ASP B 85 REMARK 465 THR B 86 REMARK 465 ARG B 87 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 49 CD NE CZ NH1 NH2 REMARK 470 LYS A 54 CD CE NZ REMARK 470 ARG A 72 NE CZ NH1 NH2 REMARK 470 LEU A 78 CG CD1 CD2 REMARK 470 ARG A 87 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 88 CG CD OE1 OE2 REMARK 470 PHE A 105 CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 107 CG CD OE1 OE2 REMARK 470 ARG A 131 CZ NH1 NH2 REMARK 470 GLU A 150 CG CD OE1 OE2 REMARK 470 LYS A 151 CG CD CE NZ REMARK 470 ARG A 175 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 248 CG CD CE NZ REMARK 470 LYS B 18 CD CE NZ REMARK 470 GLU B 20 CG CD OE1 OE2 REMARK 470 LYS B 54 CE NZ REMARK 470 LEU B 78 CG CD1 CD2 REMARK 470 GLU B 88 CG CD OE1 OE2 REMARK 470 PHE B 105 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU B 107 CG CD OE1 OE2 REMARK 470 GLU B 109 CG CD OE1 OE2 REMARK 470 ARG B 131 CZ NH1 NH2 REMARK 470 GLU B 150 CG CD OE1 OE2 REMARK 470 LYS B 151 CG CD CE NZ REMARK 470 GLU B 158 CG CD OE1 OE2 REMARK 470 LYS B 165 CG CD CE NZ REMARK 470 ARG B 175 CG CD NE CZ NH1 NH2 REMARK 470 SER B 207 CB OG REMARK 470 ILE B 210 CD1 REMARK 470 GLU B 227 CG CD OE1 OE2 REMARK 470 LYS B 248 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 105 40.25 -102.39 REMARK 500 GLU A 150 -50.00 82.31 REMARK 500 GLN A 284 -53.51 -125.59 REMARK 500 GLN B 284 -56.44 -130.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MDN A 301 O2 REMARK 620 2 MDN A 301 O8 89.2 REMARK 620 3 HOH A 404 O 96.0 98.0 REMARK 620 4 HOH A 437 O 173.7 95.7 87.4 REMARK 620 5 HOH A 444 O 92.7 92.1 166.8 83.1 REMARK 620 6 HOH A 480 O 91.4 175.6 86.4 83.5 83.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MDN B 301 O1 REMARK 620 2 MDN B 301 O6 85.8 REMARK 620 3 HOH B 413 O 95.9 95.7 REMARK 620 4 HOH B 424 O 172.3 100.1 88.3 REMARK 620 5 HOH B 465 O 90.1 90.7 171.5 85.0 REMARK 620 6 HOH B 483 O 93.9 170.6 93.6 79.4 79.9 REMARK 620 N 1 2 3 4 5 DBREF 7E4L A 1 286 UNP R4NYE9 R4NYE9_THEMA 1 286 DBREF 7E4L B 1 286 UNP R4NYE9 R4NYE9_THEMA 1 286 SEQADV 7E4L LEU A 78 UNP R4NYE9 ASN 78 ENGINEERED MUTATION SEQADV 7E4L LEU A 89 UNP R4NYE9 SER 89 ENGINEERED MUTATION SEQADV 7E4L LEU B 78 UNP R4NYE9 ASN 78 ENGINEERED MUTATION SEQADV 7E4L LEU B 89 UNP R4NYE9 SER 89 ENGINEERED MUTATION SEQRES 1 A 286 MET ILE THR PHE ILE GLY HIS VAL SER LYS ASP VAL ASN SEQRES 2 A 286 VAL VAL ASP GLY LYS ARG GLU ILE ALA TYR GLY GLY GLY SEQRES 3 A 286 VAL VAL MET GLY ALA ILE THR SER SER LEU LEU GLY VAL SEQRES 4 A 286 LYS THR LYS VAL ILE THR LYS CYS THR ARG GLU ASP VAL SEQRES 5 A 286 SER LYS PHE SER PHE LEU ARG ASP ASN GLY VAL GLU VAL SEQRES 6 A 286 VAL PHE LEU LYS SER PRO ARG THR THR SER ILE GLU LEU SEQRES 7 A 286 ARG TYR GLY SER ASP PRO ASP THR ARG GLU LEU PHE LEU SEQRES 8 A 286 ILE SER ALA ALA ASP PRO PHE THR GLU SER ASP LEU ALA SEQRES 9 A 286 PHE ILE GLU GLY GLU ALA VAL HIS ILE ASN PRO LEU TRP SEQRES 10 A 286 TYR GLY GLU PHE PRO GLU ASP LEU ILE PRO VAL LEU ARG SEQRES 11 A 286 ARG LYS VAL MET PHE LEU SER ALA ASP ALA GLN GLY PHE SEQRES 12 A 286 VAL ARG VAL PRO GLU ASN GLU LYS LEU VAL TYR ARG ASP SEQRES 13 A 286 TRP GLU MET LYS GLU LYS TYR LEU LYS TYR LEU ASP LEU SEQRES 14 A 286 PHE LYS VAL ASP SER ARG GLU ALA GLU THR LEU THR GLY SEQRES 15 A 286 THR ASN ASP LEU ARG GLU SER CYS ARG ILE ILE ARG SER SEQRES 16 A 286 PHE GLY ALA LYS ILE ILE LEU ALA THR HIS ALA SER GLY SEQRES 17 A 286 VAL ILE VAL PHE ASP GLY ASN PHE TYR GLU ALA SER PHE SEQRES 18 A 286 ARG SER TRP SER LEU GLU GLY ARG THR GLY ARG GLY ASP SEQRES 19 A 286 THR CYS THR ALA ALA PHE LEU VAL GLY PHE VAL PHE LYS SEQRES 20 A 286 LYS MET SER ILE GLU LYS ALA THR LYS PHE ALA ALA ALA SEQRES 21 A 286 VAL THR SER VAL LYS MET ARG HIS PRO GLY PRO LEU ARG SEQRES 22 A 286 ARG GLU ASP LEU GLU ALA ILE SER GLY ASP GLN TYR PHE SEQRES 1 B 286 MET ILE THR PHE ILE GLY HIS VAL SER LYS ASP VAL ASN SEQRES 2 B 286 VAL VAL ASP GLY LYS ARG GLU ILE ALA TYR GLY GLY GLY SEQRES 3 B 286 VAL VAL MET GLY ALA ILE THR SER SER LEU LEU GLY VAL SEQRES 4 B 286 LYS THR LYS VAL ILE THR LYS CYS THR ARG GLU ASP VAL SEQRES 5 B 286 SER LYS PHE SER PHE LEU ARG ASP ASN GLY VAL GLU VAL SEQRES 6 B 286 VAL PHE LEU LYS SER PRO ARG THR THR SER ILE GLU LEU SEQRES 7 B 286 ARG TYR GLY SER ASP PRO ASP THR ARG GLU LEU PHE LEU SEQRES 8 B 286 ILE SER ALA ALA ASP PRO PHE THR GLU SER ASP LEU ALA SEQRES 9 B 286 PHE ILE GLU GLY GLU ALA VAL HIS ILE ASN PRO LEU TRP SEQRES 10 B 286 TYR GLY GLU PHE PRO GLU ASP LEU ILE PRO VAL LEU ARG SEQRES 11 B 286 ARG LYS VAL MET PHE LEU SER ALA ASP ALA GLN GLY PHE SEQRES 12 B 286 VAL ARG VAL PRO GLU ASN GLU LYS LEU VAL TYR ARG ASP SEQRES 13 B 286 TRP GLU MET LYS GLU LYS TYR LEU LYS TYR LEU ASP LEU SEQRES 14 B 286 PHE LYS VAL ASP SER ARG GLU ALA GLU THR LEU THR GLY SEQRES 15 B 286 THR ASN ASP LEU ARG GLU SER CYS ARG ILE ILE ARG SER SEQRES 16 B 286 PHE GLY ALA LYS ILE ILE LEU ALA THR HIS ALA SER GLY SEQRES 17 B 286 VAL ILE VAL PHE ASP GLY ASN PHE TYR GLU ALA SER PHE SEQRES 18 B 286 ARG SER TRP SER LEU GLU GLY ARG THR GLY ARG GLY ASP SEQRES 19 B 286 THR CYS THR ALA ALA PHE LEU VAL GLY PHE VAL PHE LYS SEQRES 20 B 286 LYS MET SER ILE GLU LYS ALA THR LYS PHE ALA ALA ALA SEQRES 21 B 286 VAL THR SER VAL LYS MET ARG HIS PRO GLY PRO LEU ARG SEQRES 22 B 286 ARG GLU ASP LEU GLU ALA ILE SER GLY ASP GLN TYR PHE HET MDN A 301 9 HET MG A 302 1 HET MDN B 301 9 HET MG B 302 1 HETNAM MDN METHYLENEDIPHOSPHONIC ACID HETNAM MG MAGNESIUM ION FORMUL 3 MDN 2(C H6 O6 P2) FORMUL 4 MG 2(MG 2+) FORMUL 7 HOH *193(H2 O) HELIX 1 AA1 GLY A 25 LEU A 37 1 13 HELIX 2 AA2 THR A 48 PHE A 55 5 8 HELIX 3 AA3 SER A 56 ASN A 61 1 6 HELIX 4 AA4 THR A 99 ALA A 104 5 6 HELIX 5 AA5 PRO A 122 ASP A 124 5 3 HELIX 6 AA6 LEU A 125 VAL A 133 1 9 HELIX 7 AA7 ALA A 140 VAL A 144 1 5 HELIX 8 AA8 MET A 159 LEU A 164 1 6 HELIX 9 AA9 LYS A 165 LEU A 167 5 3 HELIX 10 AB1 SER A 174 GLY A 182 1 9 HELIX 11 AB2 ASP A 185 PHE A 196 1 12 HELIX 12 AB3 GLY A 231 PHE A 246 1 16 HELIX 13 AB4 SER A 250 MET A 266 1 17 HELIX 14 AB5 ARG A 273 GLU A 275 5 3 HELIX 15 AB6 ASP A 276 GLY A 282 1 7 HELIX 16 AB7 GLY B 25 LEU B 37 1 13 HELIX 17 AB8 THR B 48 GLU B 50 5 3 HELIX 18 AB9 ASP B 51 SER B 56 1 6 HELIX 19 AC1 PHE B 57 GLY B 62 5 6 HELIX 20 AC2 THR B 99 ALA B 104 5 6 HELIX 21 AC3 PRO B 122 ASP B 124 5 3 HELIX 22 AC4 LEU B 125 ARG B 131 1 7 HELIX 23 AC5 ALA B 140 VAL B 144 1 5 HELIX 24 AC6 MET B 159 LEU B 164 1 6 HELIX 25 AC7 LYS B 165 LEU B 167 5 3 HELIX 26 AC8 ASP B 173 GLY B 182 1 10 HELIX 27 AC9 ASP B 185 PHE B 196 1 12 HELIX 28 AD1 GLY B 231 PHE B 246 1 16 HELIX 29 AD2 SER B 250 MET B 266 1 17 HELIX 30 AD3 GLU B 275 GLY B 282 1 8 SHEET 1 AA1 9 GLU A 64 LYS A 69 0 SHEET 2 AA1 9 THR A 41 CYS A 47 1 N VAL A 43 O VAL A 66 SHEET 3 AA1 9 ILE A 2 ILE A 5 1 N PHE A 4 O LYS A 42 SHEET 4 AA1 9 ALA A 110 ILE A 113 1 O HIS A 112 N ILE A 5 SHEET 5 AA1 9 PHE A 135 ASP A 139 1 O SER A 137 N ILE A 113 SHEET 6 AA1 9 LEU A 169 ASP A 173 1 O LYS A 171 N ALA A 138 SHEET 7 AA1 9 ILE A 201 HIS A 205 1 O LEU A 202 N VAL A 172 SHEET 8 AA1 9 GLY A 208 PHE A 212 -1 O ILE A 210 N ALA A 203 SHEET 9 AA1 9 PHE A 216 SER A 220 -1 O TYR A 217 N VAL A 211 SHEET 1 AA2 6 LYS A 18 GLY A 24 0 SHEET 2 AA2 6 SER A 9 VAL A 15 -1 N ASN A 13 O GLU A 20 SHEET 3 AA2 6 THR A 74 LEU A 78 1 O ILE A 76 N VAL A 12 SHEET 4 AA2 6 LEU A 89 SER A 93 -1 O SER A 93 N SER A 75 SHEET 5 AA2 6 LYS A 151 TYR A 154 -1 O LEU A 152 N LEU A 89 SHEET 6 AA2 6 ARG A 145 GLU A 148 -1 N GLU A 148 O LYS A 151 SHEET 1 AA3 9 GLU B 64 LYS B 69 0 SHEET 2 AA3 9 THR B 41 CYS B 47 1 N VAL B 43 O VAL B 66 SHEET 3 AA3 9 ILE B 2 ILE B 5 1 N PHE B 4 O LYS B 42 SHEET 4 AA3 9 ALA B 110 ILE B 113 1 O HIS B 112 N ILE B 5 SHEET 5 AA3 9 PHE B 135 ASP B 139 1 O SER B 137 N ILE B 113 SHEET 6 AA3 9 LEU B 169 VAL B 172 1 O LYS B 171 N ALA B 138 SHEET 7 AA3 9 ILE B 200 HIS B 205 1 O ILE B 200 N PHE B 170 SHEET 8 AA3 9 GLY B 208 PHE B 212 -1 O ILE B 210 N ALA B 203 SHEET 9 AA3 9 PHE B 216 SER B 220 -1 O TYR B 217 N VAL B 211 SHEET 1 AA4 4 LYS B 18 GLY B 24 0 SHEET 2 AA4 4 SER B 9 VAL B 15 -1 N ASN B 13 O GLU B 20 SHEET 3 AA4 4 THR B 74 LEU B 78 1 O ILE B 76 N VAL B 12 SHEET 4 AA4 4 PHE B 90 SER B 93 -1 O SER B 93 N SER B 75 SHEET 1 AA5 2 ARG B 145 PRO B 147 0 SHEET 2 AA5 2 LEU B 152 TYR B 154 -1 O VAL B 153 N VAL B 146 LINK O2 MDN A 301 MG MG A 302 1555 1555 2.14 LINK O8 MDN A 301 MG MG A 302 1555 1555 2.15 LINK MG MG A 302 O HOH A 404 1555 1555 2.06 LINK MG MG A 302 O HOH A 437 1555 1555 2.25 LINK MG MG A 302 O HOH A 444 1555 1555 2.20 LINK MG MG A 302 O HOH A 480 1555 1555 2.13 LINK O1 MDN B 301 MG MG B 302 1555 1555 2.19 LINK O6 MDN B 301 MG MG B 302 1555 1555 2.19 LINK MG MG B 302 O HOH B 413 1555 1555 1.99 LINK MG MG B 302 O HOH B 424 1555 1555 2.31 LINK MG MG B 302 O HOH B 465 1555 1555 2.25 LINK MG MG B 302 O HOH B 483 1555 1555 2.02 CRYST1 46.205 46.398 66.544 83.53 80.43 68.57 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021643 -0.008496 -0.003174 0.00000 SCALE2 0.000000 0.023154 -0.001313 0.00000 SCALE3 0.000000 0.000000 0.015264 0.00000