HEADER HYDROLASE 18-FEB-21 7E5A TITLE INTERFERON-INDUCIBLE ANTI-VIRAL PROTEIN R356A COMPND MOL_ID: 1; COMPND 2 MOLECULE: GUANYLATE-BINDING PROTEIN 5; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: INTERFERON-INDUCED ANTI-HIV PROTEIN,GBP-TA ANTIGEN,GTP- COMPND 5 BINDING PROTEIN 5,GBP-5,GUANINE NUCLEOTIDE-BINDING PROTEIN 5; COMPND 6 EC: 3.6.5.-; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GBP5, UNQ2427/PRO4987; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS INTERFERON-INDUCED, GTPASE, ANTI-HIV, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR W.CUI,W.WANG,C.CHEN,B.SLATER,Y.XIONG,X.Y.JI,H.T.YANG REVDAT 2 29-NOV-23 7E5A 1 REMARK REVDAT 1 05-MAY-21 7E5A 0 JRNL AUTH W.CUI,E.BRAUN,W.WANG,J.TANG,Y.ZHENG,B.SLATER,N.LI,C.CHEN, JRNL AUTH 2 Q.LIU,B.WANG,X.LI,Y.DUAN,Y.XIAO,R.TI,D.HOTTER,X.JI,L.ZHANG, JRNL AUTH 3 J.CUI,Y.XIONG,D.SAUTER,Z.WANG,F.KIRCHHOFF,H.YANG JRNL TITL STRUCTURAL BASIS FOR GTP-INDUCED DIMERIZATION AND ANTIVIRAL JRNL TITL 2 FUNCTION OF GUANYLATE-BINDING PROTEINS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 118 2021 JRNL REFN ESSN 1091-6490 JRNL PMID 33876762 JRNL DOI 10.1073/PNAS.2022269118 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.48 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 44175 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.180 REMARK 3 FREE R VALUE TEST SET COUNT : 2288 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.4800 - 6.2900 0.95 2703 153 0.1729 0.2195 REMARK 3 2 6.2900 - 4.9900 0.98 2689 122 0.1955 0.2369 REMARK 3 3 4.9900 - 4.3600 0.97 2598 130 0.1678 0.1872 REMARK 3 4 4.3600 - 3.9600 0.97 2580 151 0.1827 0.2271 REMARK 3 5 3.9600 - 3.6800 0.99 2578 169 0.2075 0.2322 REMARK 3 6 3.6800 - 3.4600 0.99 2609 146 0.2236 0.2999 REMARK 3 7 3.4600 - 3.2900 0.99 2615 162 0.2303 0.2499 REMARK 3 8 3.2900 - 3.1500 0.99 2651 125 0.2492 0.2993 REMARK 3 9 3.1500 - 3.0300 0.99 2641 120 0.2529 0.3108 REMARK 3 10 3.0300 - 2.9200 0.99 2588 147 0.2704 0.3222 REMARK 3 11 2.9200 - 2.8300 0.99 2601 144 0.2698 0.3176 REMARK 3 12 2.8300 - 2.7500 1.00 2626 146 0.2695 0.2958 REMARK 3 13 2.7500 - 2.6800 1.00 2620 129 0.2732 0.2711 REMARK 3 14 2.6800 - 2.6100 1.00 2600 169 0.2899 0.3356 REMARK 3 15 2.6100 - 2.5500 1.00 2622 141 0.2970 0.3338 REMARK 3 16 2.5500 - 2.5000 0.97 2566 134 0.3376 0.3575 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.290 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 84.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 5 THROUGH 312 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.1666 1.1026 9.5270 REMARK 3 T TENSOR REMARK 3 T11: 0.5272 T22: 0.4126 REMARK 3 T33: 0.4165 T12: -0.0298 REMARK 3 T13: -0.0042 T23: -0.0068 REMARK 3 L TENSOR REMARK 3 L11: 1.1950 L22: 0.9537 REMARK 3 L33: 0.9621 L12: 0.0356 REMARK 3 L13: -0.1813 L23: 0.0207 REMARK 3 S TENSOR REMARK 3 S11: -0.0929 S12: 0.0139 S13: -0.0276 REMARK 3 S21: -0.0123 S22: 0.0662 S23: 0.0243 REMARK 3 S31: -0.1038 S32: -0.1875 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 313 THROUGH 412 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.5696 51.0057 1.4690 REMARK 3 T TENSOR REMARK 3 T11: 1.1153 T22: 0.5445 REMARK 3 T33: 0.9657 T12: -0.1969 REMARK 3 T13: 0.1632 T23: 0.0879 REMARK 3 L TENSOR REMARK 3 L11: 0.3688 L22: 0.1662 REMARK 3 L33: 0.1683 L12: -0.2113 REMARK 3 L13: 0.5605 L23: 0.1679 REMARK 3 S TENSOR REMARK 3 S11: 0.0294 S12: 0.0722 S13: -0.1032 REMARK 3 S21: 0.3396 S22: 0.0056 S23: -0.2923 REMARK 3 S31: -0.4069 S32: 0.2641 S33: -0.0002 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 413 THROUGH 483 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.0499 91.5068 10.5443 REMARK 3 T TENSOR REMARK 3 T11: 1.4008 T22: 0.7993 REMARK 3 T33: 1.3775 T12: -0.2198 REMARK 3 T13: -0.2529 T23: 0.1318 REMARK 3 L TENSOR REMARK 3 L11: 0.1177 L22: 0.0107 REMARK 3 L33: 0.3082 L12: -0.1125 REMARK 3 L13: -0.2919 L23: 0.0782 REMARK 3 S TENSOR REMARK 3 S11: -0.4793 S12: 0.1153 S13: -0.0273 REMARK 3 S21: 0.5669 S22: 0.5431 S23: -0.2112 REMARK 3 S31: 0.3885 S32: -0.2263 S33: -0.0003 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 5 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): 74.2416 5.8408 -3.1855 REMARK 3 T TENSOR REMARK 3 T11: 0.6463 T22: 0.5881 REMARK 3 T33: 0.7171 T12: -0.1346 REMARK 3 T13: 0.0261 T23: -0.0563 REMARK 3 L TENSOR REMARK 3 L11: 0.3419 L22: 0.0206 REMARK 3 L33: 0.1514 L12: -0.0697 REMARK 3 L13: 0.1726 L23: -0.0752 REMARK 3 S TENSOR REMARK 3 S11: 0.0425 S12: -0.0368 S13: -0.1235 REMARK 3 S21: 0.1829 S22: 0.2593 S23: -0.5272 REMARK 3 S31: 0.3983 S32: 0.3236 S33: 0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 37 THROUGH 108 ) REMARK 3 ORIGIN FOR THE GROUP (A): 62.8613 -0.7112 -6.3189 REMARK 3 T TENSOR REMARK 3 T11: 0.5766 T22: 0.3950 REMARK 3 T33: 0.5231 T12: -0.1246 REMARK 3 T13: 0.0658 T23: -0.0469 REMARK 3 L TENSOR REMARK 3 L11: 0.3662 L22: 0.4839 REMARK 3 L33: 0.2358 L12: 0.0245 REMARK 3 L13: 0.1771 L23: -0.1749 REMARK 3 S TENSOR REMARK 3 S11: -0.0478 S12: -0.0613 S13: -0.0221 REMARK 3 S21: 0.1091 S22: 0.1905 S23: -0.2104 REMARK 3 S31: 0.1148 S32: 0.1382 S33: 0.0001 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 109 THROUGH 211 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.4636 10.6322 -11.0317 REMARK 3 T TENSOR REMARK 3 T11: 0.6377 T22: 0.4415 REMARK 3 T33: 0.4821 T12: -0.1057 REMARK 3 T13: 0.0217 T23: 0.0386 REMARK 3 L TENSOR REMARK 3 L11: 0.8278 L22: 0.3488 REMARK 3 L33: 0.7044 L12: 0.0651 REMARK 3 L13: -0.0761 L23: 0.3365 REMARK 3 S TENSOR REMARK 3 S11: -0.0894 S12: 0.0704 S13: 0.1413 REMARK 3 S21: -0.1842 S22: 0.1160 S23: -0.1528 REMARK 3 S31: -0.1976 S32: -0.0827 S33: 0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 212 THROUGH 312 ) REMARK 3 ORIGIN FOR THE GROUP (A): 55.8660 4.9452 -11.3782 REMARK 3 T TENSOR REMARK 3 T11: 0.5847 T22: 0.4074 REMARK 3 T33: 0.5130 T12: -0.1339 REMARK 3 T13: 0.0260 T23: -0.0085 REMARK 3 L TENSOR REMARK 3 L11: 1.4349 L22: 0.2830 REMARK 3 L33: 1.0394 L12: 0.1544 REMARK 3 L13: -0.2594 L23: 0.2177 REMARK 3 S TENSOR REMARK 3 S11: -0.1076 S12: 0.2219 S13: 0.0924 REMARK 3 S21: -0.1283 S22: 0.1334 S23: 0.0459 REMARK 3 S31: -0.0627 S32: -0.0225 S33: 0.0000 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 313 THROUGH 373 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.5641 40.2634 18.2020 REMARK 3 T TENSOR REMARK 3 T11: 0.9814 T22: 0.5358 REMARK 3 T33: 0.6455 T12: 0.0992 REMARK 3 T13: -0.0245 T23: -0.0627 REMARK 3 L TENSOR REMARK 3 L11: 0.0233 L22: 0.3134 REMARK 3 L33: 0.2319 L12: 0.0865 REMARK 3 L13: 0.0246 L23: -0.2267 REMARK 3 S TENSOR REMARK 3 S11: 0.0844 S12: 0.1333 S13: -0.2756 REMARK 3 S21: -0.3553 S22: -0.1017 S23: 0.0289 REMARK 3 S31: -0.4336 S32: -0.2690 S33: -0.0002 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 374 THROUGH 484 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.0647 75.4215 19.0849 REMARK 3 T TENSOR REMARK 3 T11: 1.4174 T22: 0.5962 REMARK 3 T33: 0.7618 T12: 0.1612 REMARK 3 T13: -0.0919 T23: -0.0358 REMARK 3 L TENSOR REMARK 3 L11: 0.4641 L22: 0.5091 REMARK 3 L33: -0.2902 L12: 0.6384 REMARK 3 L13: 0.5543 L23: 0.2279 REMARK 3 S TENSOR REMARK 3 S11: -0.3640 S12: -0.0262 S13: -0.0075 REMARK 3 S21: -0.2797 S22: 0.2564 S23: 0.7105 REMARK 3 S31: -0.1560 S32: -0.0602 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 5 THROUGH 158 OR REMARK 3 RESID 165 THROUGH 483 OR RESID 593 REMARK 3 THROUGH 595)) REMARK 3 SELECTION : (CHAIN B AND (RESID 5 THROUGH 332 OR REMARK 3 (RESID 333 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 334 REMARK 3 THROUGH 336 OR (RESID 337 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 338 OR RESID 343 THROUGH 344 OR REMARK 3 (RESID 345 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 346 REMARK 3 THROUGH 354 OR (RESID 355 THROUGH 356 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 357 THROUGH 389 OR REMARK 3 (RESID 390 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 391 REMARK 3 THROUGH 426 OR RESID 432 THROUGH 436 OR REMARK 3 (RESID 437 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 438 REMARK 3 THROUGH 439 OR (RESID 440 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 441 THROUGH 446 OR (RESID 447 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 448 THROUGH 456 REMARK 3 OR (RESID 457 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 458 THROUGH 460 OR (RESID 461 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESID 462 THROUGH 483 OR RESID 593 REMARK 3 THROUGH 595)) REMARK 3 ATOM PAIRS NUMBER : 4319 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7E5A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-FEB-21. REMARK 100 THE DEPOSITION ID IS D_1300019854. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-JAN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44229 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 9.100 REMARK 200 R MERGE (I) : 0.12300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 5.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 7.90 REMARK 200 R MERGE FOR SHELL (I) : 1.29400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1F5N REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, HEPES PH 7.5, REMARK 280 POLYETHYLENE GLYCOL 3350, MICROBATCH, TEMPERATURE 289.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 112.32667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 56.16333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 56.16333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 112.32667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 43700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 LEU A 3 REMARK 465 GLU A 4 REMARK 465 ASP A 159 REMARK 465 LEU A 160 REMARK 465 ASP A 161 REMARK 465 ARG A 162 REMARK 465 VAL A 163 REMARK 465 GLN A 339 REMARK 465 LYS A 340 REMARK 465 VAL A 341 REMARK 465 GLN A 342 REMARK 465 LYS A 427 REMARK 465 PRO A 428 REMARK 465 GLY A 429 REMARK 465 GLY A 430 REMARK 465 HIS A 431 REMARK 465 GLU A 484 REMARK 465 LYS A 485 REMARK 465 LYS A 486 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 LEU B 3 REMARK 465 GLU B 4 REMARK 465 ASP B 159 REMARK 465 LEU B 160 REMARK 465 ASP B 161 REMARK 465 ARG B 162 REMARK 465 VAL B 163 REMARK 465 GLU B 164 REMARK 465 GLY B 429 REMARK 465 GLY B 430 REMARK 465 HIS B 431 REMARK 465 LYS B 485 REMARK 465 LYS B 486 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A 333 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 MET A 337 CG SD CE REMARK 470 MET A 345 CG SD CE REMARK 470 HIS A 355 CG ND1 CD2 CE1 NE2 REMARK 470 GLN A 390 CG CD OE1 NE2 REMARK 470 LYS A 437 CG CD CE NZ REMARK 470 GLU A 440 CG CD OE1 OE2 REMARK 470 ARG A 447 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 457 CG CD OE1 OE2 REMARK 470 LYS A 461 CG CD CE NZ REMARK 470 VAL B 341 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 18 -101.47 53.21 REMARK 500 HIS A 74 -69.56 -122.91 REMARK 500 ASN A 87 -32.90 -131.60 REMARK 500 ASN A 132 -48.28 71.18 REMARK 500 ASP A 165 74.52 57.51 REMARK 500 ASN A 287 -167.35 -115.07 REMARK 500 MET A 337 42.86 -83.54 REMARK 500 ARG A 450 65.14 65.05 REMARK 500 ASN B 18 -101.29 54.22 REMARK 500 HIS B 74 -70.46 -122.46 REMARK 500 ASN B 132 -48.63 70.81 REMARK 500 ASN B 287 -168.34 -114.43 REMARK 500 MET B 337 40.58 -86.10 REMARK 500 ARG B 450 66.06 60.47 REMARK 500 THR B 483 -39.69 -39.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 503 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 52 OG REMARK 620 2 THR A 75 OG1 72.0 REMARK 620 3 GDP A 501 O2B 69.4 100.0 REMARK 620 4 GDP A 501 O1A 119.7 164.9 77.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 503 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 52 OG REMARK 620 2 THR B 75 OG1 83.8 REMARK 620 3 GDP B 501 O2B 83.1 131.8 REMARK 620 N 1 2 DBREF 7E5A A 1 486 UNP Q96PP8 GBP5_HUMAN 1 486 DBREF 7E5A B 1 486 UNP Q96PP8 GBP5_HUMAN 1 486 SEQADV 7E5A SER A 0 UNP Q96PP8 EXPRESSION TAG SEQADV 7E5A ALA A 356 UNP Q96PP8 ARG 356 ENGINEERED MUTATION SEQADV 7E5A SER B 0 UNP Q96PP8 EXPRESSION TAG SEQADV 7E5A ALA B 356 UNP Q96PP8 ARG 356 ENGINEERED MUTATION SEQRES 1 A 487 SER MET ALA LEU GLU ILE HIS MET SER ASP PRO MET CYS SEQRES 2 A 487 LEU ILE GLU ASN PHE ASN GLU GLN LEU LYS VAL ASN GLN SEQRES 3 A 487 GLU ALA LEU GLU ILE LEU SER ALA ILE THR GLN PRO VAL SEQRES 4 A 487 VAL VAL VAL ALA ILE VAL GLY LEU TYR ARG THR GLY LYS SEQRES 5 A 487 SER TYR LEU MET ASN LYS LEU ALA GLY LYS ASN LYS GLY SEQRES 6 A 487 PHE SER VAL ALA SER THR VAL GLN SER HIS THR LYS GLY SEQRES 7 A 487 ILE TRP ILE TRP CYS VAL PRO HIS PRO ASN TRP PRO ASN SEQRES 8 A 487 HIS THR LEU VAL LEU LEU ASP THR GLU GLY LEU GLY ASP SEQRES 9 A 487 VAL GLU LYS ALA ASP ASN LYS ASN ASP ILE GLN ILE PHE SEQRES 10 A 487 ALA LEU ALA LEU LEU LEU SER SER THR PHE VAL TYR ASN SEQRES 11 A 487 THR VAL ASN LYS ILE ASP GLN GLY ALA ILE ASP LEU LEU SEQRES 12 A 487 HIS ASN VAL THR GLU LEU THR ASP LEU LEU LYS ALA ARG SEQRES 13 A 487 ASN SER PRO ASP LEU ASP ARG VAL GLU ASP PRO ALA ASP SEQRES 14 A 487 SER ALA SER PHE PHE PRO ASP LEU VAL TRP THR LEU ARG SEQRES 15 A 487 ASP PHE CYS LEU GLY LEU GLU ILE ASP GLY GLN LEU VAL SEQRES 16 A 487 THR PRO ASP GLU TYR LEU GLU ASN SER LEU ARG PRO LYS SEQRES 17 A 487 GLN GLY SER ASP GLN ARG VAL GLN ASN PHE ASN LEU PRO SEQRES 18 A 487 ARG LEU CYS ILE GLN LYS PHE PHE PRO LYS LYS LYS CYS SEQRES 19 A 487 PHE ILE PHE ASP LEU PRO ALA HIS GLN LYS LYS LEU ALA SEQRES 20 A 487 GLN LEU GLU THR LEU PRO ASP ASP GLU LEU GLU PRO GLU SEQRES 21 A 487 PHE VAL GLN GLN VAL THR GLU PHE CYS SER TYR ILE PHE SEQRES 22 A 487 SER HIS SER MET THR LYS THR LEU PRO GLY GLY ILE MET SEQRES 23 A 487 VAL ASN GLY SER ARG LEU LYS ASN LEU VAL LEU THR TYR SEQRES 24 A 487 VAL ASN ALA ILE SER SER GLY ASP LEU PRO CYS ILE GLU SEQRES 25 A 487 ASN ALA VAL LEU ALA LEU ALA GLN ARG GLU ASN SER ALA SEQRES 26 A 487 ALA VAL GLN LYS ALA ILE ALA HIS TYR ASP GLN GLN MET SEQRES 27 A 487 GLY GLN LYS VAL GLN LEU PRO MET GLU THR LEU GLN GLU SEQRES 28 A 487 LEU LEU ASP LEU HIS ALA THR SER GLU ARG GLU ALA ILE SEQRES 29 A 487 GLU VAL PHE MET LYS ASN SER PHE LYS ASP VAL ASP GLN SEQRES 30 A 487 SER PHE GLN LYS GLU LEU GLU THR LEU LEU ASP ALA LYS SEQRES 31 A 487 GLN ASN ASP ILE CYS LYS ARG ASN LEU GLU ALA SER SER SEQRES 32 A 487 ASP TYR CYS SER ALA LEU LEU LYS ASP ILE PHE GLY PRO SEQRES 33 A 487 LEU GLU GLU ALA VAL LYS GLN GLY ILE TYR SER LYS PRO SEQRES 34 A 487 GLY GLY HIS ASN LEU PHE ILE GLN LYS THR GLU GLU LEU SEQRES 35 A 487 LYS ALA LYS TYR TYR ARG GLU PRO ARG LYS GLY ILE GLN SEQRES 36 A 487 ALA GLU GLU VAL LEU GLN LYS TYR LEU LYS SER LYS GLU SEQRES 37 A 487 SER VAL SER HIS ALA ILE LEU GLN THR ASP GLN ALA LEU SEQRES 38 A 487 THR GLU THR GLU LYS LYS SEQRES 1 B 487 SER MET ALA LEU GLU ILE HIS MET SER ASP PRO MET CYS SEQRES 2 B 487 LEU ILE GLU ASN PHE ASN GLU GLN LEU LYS VAL ASN GLN SEQRES 3 B 487 GLU ALA LEU GLU ILE LEU SER ALA ILE THR GLN PRO VAL SEQRES 4 B 487 VAL VAL VAL ALA ILE VAL GLY LEU TYR ARG THR GLY LYS SEQRES 5 B 487 SER TYR LEU MET ASN LYS LEU ALA GLY LYS ASN LYS GLY SEQRES 6 B 487 PHE SER VAL ALA SER THR VAL GLN SER HIS THR LYS GLY SEQRES 7 B 487 ILE TRP ILE TRP CYS VAL PRO HIS PRO ASN TRP PRO ASN SEQRES 8 B 487 HIS THR LEU VAL LEU LEU ASP THR GLU GLY LEU GLY ASP SEQRES 9 B 487 VAL GLU LYS ALA ASP ASN LYS ASN ASP ILE GLN ILE PHE SEQRES 10 B 487 ALA LEU ALA LEU LEU LEU SER SER THR PHE VAL TYR ASN SEQRES 11 B 487 THR VAL ASN LYS ILE ASP GLN GLY ALA ILE ASP LEU LEU SEQRES 12 B 487 HIS ASN VAL THR GLU LEU THR ASP LEU LEU LYS ALA ARG SEQRES 13 B 487 ASN SER PRO ASP LEU ASP ARG VAL GLU ASP PRO ALA ASP SEQRES 14 B 487 SER ALA SER PHE PHE PRO ASP LEU VAL TRP THR LEU ARG SEQRES 15 B 487 ASP PHE CYS LEU GLY LEU GLU ILE ASP GLY GLN LEU VAL SEQRES 16 B 487 THR PRO ASP GLU TYR LEU GLU ASN SER LEU ARG PRO LYS SEQRES 17 B 487 GLN GLY SER ASP GLN ARG VAL GLN ASN PHE ASN LEU PRO SEQRES 18 B 487 ARG LEU CYS ILE GLN LYS PHE PHE PRO LYS LYS LYS CYS SEQRES 19 B 487 PHE ILE PHE ASP LEU PRO ALA HIS GLN LYS LYS LEU ALA SEQRES 20 B 487 GLN LEU GLU THR LEU PRO ASP ASP GLU LEU GLU PRO GLU SEQRES 21 B 487 PHE VAL GLN GLN VAL THR GLU PHE CYS SER TYR ILE PHE SEQRES 22 B 487 SER HIS SER MET THR LYS THR LEU PRO GLY GLY ILE MET SEQRES 23 B 487 VAL ASN GLY SER ARG LEU LYS ASN LEU VAL LEU THR TYR SEQRES 24 B 487 VAL ASN ALA ILE SER SER GLY ASP LEU PRO CYS ILE GLU SEQRES 25 B 487 ASN ALA VAL LEU ALA LEU ALA GLN ARG GLU ASN SER ALA SEQRES 26 B 487 ALA VAL GLN LYS ALA ILE ALA HIS TYR ASP GLN GLN MET SEQRES 27 B 487 GLY GLN LYS VAL GLN LEU PRO MET GLU THR LEU GLN GLU SEQRES 28 B 487 LEU LEU ASP LEU HIS ALA THR SER GLU ARG GLU ALA ILE SEQRES 29 B 487 GLU VAL PHE MET LYS ASN SER PHE LYS ASP VAL ASP GLN SEQRES 30 B 487 SER PHE GLN LYS GLU LEU GLU THR LEU LEU ASP ALA LYS SEQRES 31 B 487 GLN ASN ASP ILE CYS LYS ARG ASN LEU GLU ALA SER SER SEQRES 32 B 487 ASP TYR CYS SER ALA LEU LEU LYS ASP ILE PHE GLY PRO SEQRES 33 B 487 LEU GLU GLU ALA VAL LYS GLN GLY ILE TYR SER LYS PRO SEQRES 34 B 487 GLY GLY HIS ASN LEU PHE ILE GLN LYS THR GLU GLU LEU SEQRES 35 B 487 LYS ALA LYS TYR TYR ARG GLU PRO ARG LYS GLY ILE GLN SEQRES 36 B 487 ALA GLU GLU VAL LEU GLN LYS TYR LEU LYS SER LYS GLU SEQRES 37 B 487 SER VAL SER HIS ALA ILE LEU GLN THR ASP GLN ALA LEU SEQRES 38 B 487 THR GLU THR GLU LYS LYS HET GDP A 501 28 HET AF3 A 502 4 HET MG A 503 1 HET GDP B 501 28 HET AF3 B 502 4 HET MG B 503 1 HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM AF3 ALUMINUM FLUORIDE HETNAM MG MAGNESIUM ION FORMUL 3 GDP 2(C10 H15 N5 O11 P2) FORMUL 4 AF3 2(AL F3) FORMUL 5 MG 2(MG 2+) FORMUL 9 HOH *110(H2 O) HELIX 1 AA1 ASN A 24 ALA A 33 1 10 HELIX 2 AA2 GLY A 50 ALA A 59 1 10 HELIX 3 AA3 ASN A 109 SER A 123 1 15 HELIX 4 AA4 ASP A 135 ARG A 155 1 21 HELIX 5 AA5 SER A 169 PHE A 173 5 5 HELIX 6 AA6 THR A 195 ARG A 205 1 11 HELIX 7 AA7 ASP A 211 PHE A 228 1 18 HELIX 8 AA8 HIS A 241 LEU A 251 5 11 HELIX 9 AA9 PRO A 252 LEU A 256 5 5 HELIX 10 AB1 GLU A 257 SER A 275 1 19 HELIX 11 AB2 ASN A 287 SER A 304 1 18 HELIX 12 AB3 ASN A 312 GLN A 336 1 25 HELIX 13 AB4 LEU A 348 SER A 370 1 23 HELIX 14 AB5 ASP A 373 ASP A 375 5 3 HELIX 15 AB6 GLN A 376 PHE A 413 1 38 HELIX 16 AB7 PHE A 413 GLY A 423 1 11 HELIX 17 AB8 LEU A 433 GLU A 448 1 16 HELIX 18 AB9 GLN A 454 LYS A 466 1 13 HELIX 19 AC1 SER A 468 THR A 483 1 16 HELIX 20 AC2 ASN B 24 ALA B 33 1 10 HELIX 21 AC3 GLY B 50 ALA B 59 1 10 HELIX 22 AC4 ASN B 109 SER B 123 1 15 HELIX 23 AC5 ASP B 135 ARG B 155 1 21 HELIX 24 AC6 ASP B 168 PHE B 173 5 6 HELIX 25 AC7 THR B 195 ARG B 205 1 11 HELIX 26 AC8 ASP B 211 PHE B 228 1 18 HELIX 27 AC9 HIS B 241 LEU B 245 5 5 HELIX 28 AD1 GLN B 247 LEU B 251 5 5 HELIX 29 AD2 PRO B 252 LEU B 256 5 5 HELIX 30 AD3 GLU B 257 SER B 275 1 19 HELIX 31 AD4 ASN B 287 SER B 304 1 18 HELIX 32 AD5 ASN B 312 GLN B 336 1 25 HELIX 33 AD6 THR B 347 SER B 370 1 24 HELIX 34 AD7 ASP B 373 ASP B 375 5 3 HELIX 35 AD8 GLN B 376 PHE B 413 1 38 HELIX 36 AD9 PHE B 413 GLY B 423 1 11 HELIX 37 AE1 LEU B 433 GLU B 448 1 16 HELIX 38 AE2 GLN B 454 LYS B 466 1 13 HELIX 39 AE3 LYS B 466 GLU B 484 1 19 SHEET 1 AA1 8 GLN A 20 VAL A 23 0 SHEET 2 AA1 8 MET A 11 PHE A 17 -1 N GLU A 15 O LYS A 22 SHEET 3 AA1 8 ILE A 78 PRO A 84 -1 O ILE A 80 N MET A 11 SHEET 4 AA1 8 THR A 92 THR A 98 -1 O LEU A 93 N VAL A 83 SHEET 5 AA1 8 VAL A 38 GLY A 45 1 N VAL A 41 O VAL A 94 SHEET 6 AA1 8 THR A 125 VAL A 131 1 O VAL A 127 N ALA A 42 SHEET 7 AA1 8 ASP A 175 ARG A 181 1 O ASP A 175 N PHE A 126 SHEET 8 AA1 8 LYS A 231 ILE A 235 1 O LYS A 232 N TRP A 178 SHEET 1 AA2 2 GLU A 188 ILE A 189 0 SHEET 2 AA2 2 GLN A 192 LEU A 193 -1 O GLN A 192 N ILE A 189 SHEET 1 AA3 2 THR A 279 LEU A 280 0 SHEET 2 AA3 2 ILE A 284 MET A 285 -1 O ILE A 284 N LEU A 280 SHEET 1 AA4 8 GLN B 20 VAL B 23 0 SHEET 2 AA4 8 MET B 11 PHE B 17 -1 N GLU B 15 O LYS B 22 SHEET 3 AA4 8 ILE B 78 PRO B 84 -1 O ILE B 80 N MET B 11 SHEET 4 AA4 8 THR B 92 THR B 98 -1 O ASP B 97 N TRP B 79 SHEET 5 AA4 8 VAL B 38 GLY B 45 1 N VAL B 39 O VAL B 94 SHEET 6 AA4 8 THR B 125 VAL B 131 1 O VAL B 127 N ALA B 42 SHEET 7 AA4 8 ASP B 175 ARG B 181 1 O ASP B 175 N PHE B 126 SHEET 8 AA4 8 LYS B 231 ILE B 235 1 O LYS B 232 N TRP B 178 SHEET 1 AA5 2 GLU B 188 ILE B 189 0 SHEET 2 AA5 2 GLN B 192 LEU B 193 -1 O GLN B 192 N ILE B 189 SHEET 1 AA6 2 THR B 279 LEU B 280 0 SHEET 2 AA6 2 ILE B 284 MET B 285 -1 O ILE B 284 N LEU B 280 LINK OG SER A 52 MG MG A 503 1555 1555 2.36 LINK OG1 THR A 75 MG MG A 503 1555 1555 2.60 LINK O2B GDP A 501 MG MG A 503 1555 1555 2.54 LINK O1A GDP A 501 MG MG A 503 1555 1555 2.80 LINK OG SER B 52 MG MG B 503 1555 1555 2.02 LINK OG1 THR B 75 MG MG B 503 1555 1555 2.27 LINK O2B GDP B 501 MG MG B 503 1555 1555 2.18 CRYST1 114.260 114.260 168.490 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008752 0.005053 0.000000 0.00000 SCALE2 0.000000 0.010106 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005935 0.00000