HEADER FLUORESCENT PROTEIN 05-MAR-21 7E9Y TITLE CRYSTAL STRUCTURE OF ELACCO1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LACTATE-BINDING PERIPLASMIC PROTEIN TTHA0766,LACTATE- COMPND 3 BINDING PERIPLASMIC PROTEIN TTHA0766; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: ABC TRANSPORTER,SOLUTE-BINDING PROTEIN,EXTRACYTOPLASMIC COMPND 6 SOLUTE RECEPTOR PROTEIN TTHA0766,TRAP TRANSPORTER LACTATE-BINDING COMPND 7 SUBUNIT P; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS HB8, THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 300852, 274; SOURCE 4 STRAIN: HB8; SOURCE 5 GENE: TTHA0766; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BIOSENSOR, GENETICALLY ENCODED FLUORESCENT BIOSENSOR, EXTRACELLULAR, KEYWDS 2 L-LACTATE, FLUORESCENT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.WEN,R.E.CAMPBELL,M.J.LEMIEUX,Y.NASU REVDAT 3 29-NOV-23 7E9Y 1 REMARK REVDAT 2 15-NOV-23 7E9Y 1 ATOM REVDAT 1 22-DEC-21 7E9Y 0 JRNL AUTH Y.NASU,C.MURPHY-ROYAL,Y.WEN,J.N.HAIDEY,R.S.MOLINA, JRNL AUTH 2 A.AGGARWAL,S.ZHANG,Y.KAMIJO,M.E.PAQUET,K.PODGORSKI, JRNL AUTH 3 M.DROBIZHEV,J.S.BAINS,M.J.LEMIEUX,G.R.GORDON,R.E.CAMPBELL JRNL TITL A GENETICALLY ENCODED FLUORESCENT BIOSENSOR FOR JRNL TITL 2 EXTRACELLULAR L-LACTATE. JRNL REF NAT COMMUN V. 12 7058 2021 JRNL REFN ESSN 2041-1723 JRNL PMID 34873165 JRNL DOI 10.1038/S41467-021-27332-2 REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 52.49 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 35740 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.149 REMARK 3 R VALUE (WORKING SET) : 0.147 REMARK 3 FREE R VALUE : 0.185 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.610 REMARK 3 FREE R VALUE TEST SET COUNT : 2005 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 50.0000 - 5.4211 1.00 2543 156 0.1748 0.1796 REMARK 3 2 5.4211 - 4.3035 1.00 2441 151 0.1180 0.1420 REMARK 3 3 4.3035 - 3.7597 1.00 2439 142 0.1259 0.1615 REMARK 3 4 3.7597 - 3.4160 1.00 2418 140 0.1428 0.1749 REMARK 3 5 3.4160 - 3.1712 1.00 2407 137 0.1522 0.1788 REMARK 3 6 3.1712 - 2.9843 1.00 2408 149 0.1517 0.1860 REMARK 3 7 2.9843 - 2.8348 1.00 2381 140 0.1584 0.2251 REMARK 3 8 2.8348 - 2.7114 1.00 2379 142 0.1571 0.1974 REMARK 3 9 2.7114 - 2.6070 1.00 2391 137 0.1514 0.2010 REMARK 3 10 2.6070 - 2.5171 1.00 2408 145 0.1489 0.2295 REMARK 3 11 2.5171 - 2.4384 1.00 2357 147 0.1559 0.2117 REMARK 3 12 2.4384 - 2.3687 1.00 2397 134 0.1499 0.2111 REMARK 3 13 2.3687 - 2.3063 1.00 2385 145 0.1531 0.2154 REMARK 3 14 2.3063 - 2.2500 1.00 2381 140 0.1536 0.2021 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.400 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7E9Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-MAR-21. REMARK 100 THE DEPOSITION ID IS D_1300021035. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-AUG-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35740 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 52.492 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.7500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2ZZV, 3SG6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM CITRATE DIBASIC 20% W/V REMARK 280 PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.37400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 69.37400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 51.10850 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 52.49150 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 51.10850 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 52.49150 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 69.37400 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 51.10850 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 52.49150 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 69.37400 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 51.10850 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 52.49150 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 806 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1198 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -31 REMARK 465 HIS A -30 REMARK 465 HIS A -29 REMARK 465 HIS A -28 REMARK 465 HIS A -27 REMARK 465 HIS A -26 REMARK 465 GLY A -25 REMARK 465 MET A -24 REMARK 465 ALA A -23 REMARK 465 SER A -22 REMARK 465 MET A -21 REMARK 465 THR A -20 REMARK 465 GLY A -19 REMARK 465 GLY A -18 REMARK 465 GLN A -17 REMARK 465 GLN A -16 REMARK 465 MET A -15 REMARK 465 GLY A -14 REMARK 465 ARG A -13 REMARK 465 ASP A -12 REMARK 465 LEU A -11 REMARK 465 TYR A -10 REMARK 465 ASP A -9 REMARK 465 ASP A -8 REMARK 465 ASP A -7 REMARK 465 ASP A -6 REMARK 465 LYS A -5 REMARK 465 ASP A -4 REMARK 465 PRO A -3 REMARK 465 SER A -2 REMARK 465 SER A -1 REMARK 465 ARG A 0 REMARK 465 MET A 1 REMARK 465 PHE A 2 REMARK 465 SER A 3 REMARK 465 PRO A 4 REMARK 465 LEU A 5 REMARK 465 ALA A 6 REMARK 465 VAL A 7 REMARK 465 ALA A 8 REMARK 465 GLN A 9 REMARK 465 ALA A 10 REMARK 465 GLU A 282 REMARK 465 LEU A 283 REMARK 465 TYR A 284 REMARK 465 LYS A 285 REMARK 465 GLY A 286 REMARK 465 GLY A 287 REMARK 465 THR A 288 REMARK 465 GLY A 289 REMARK 465 GLY A 290 REMARK 465 ARG A 291 REMARK 465 MET A 292 REMARK 465 VAL A 293 REMARK 465 SER A 294 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 11 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 12 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 425 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE ARG A 215 O HOH A 715 1.50 REMARK 500 HG1 THR A 580 O HOH A 718 1.51 REMARK 500 HZ1 LYS A 203 O HOH A 702 1.55 REMARK 500 OD2 ASP A 421 O HOH A 701 1.81 REMARK 500 O HOH A 1085 O HOH A 1130 1.93 REMARK 500 O HOH A 1085 O HOH A 1102 1.97 REMARK 500 O HOH A 1128 O HOH A 1159 2.02 REMARK 500 O HOH A 997 O HOH A 1177 2.03 REMARK 500 O HOH A 1181 O HOH A 1205 2.04 REMARK 500 NZ LYS A 203 O HOH A 702 2.10 REMARK 500 O HOH A 891 O HOH A 1039 2.11 REMARK 500 O HOH A 837 O HOH A 1096 2.11 REMARK 500 O HOH A 1105 O HOH A 1178 2.12 REMARK 500 N LYS A 295 O HOH A 703 2.16 REMARK 500 NZ LYS A 525 O HOH A 704 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 HH21 ARG A 14 OH TYR A 229 4555 1.37 REMARK 500 NH2 ARG A 14 OH TYR A 229 4555 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 444 CB - CG - OD1 ANGL. DEV. = 6.9 DEGREES REMARK 500 ASP A 444 CB - CG - OD2 ANGL. DEV. = -6.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 134 -78.79 -155.90 REMARK 500 ASP A 135 166.22 179.49 REMARK 500 PRO A 144 99.03 -68.85 REMARK 500 PRO A 159 37.66 -93.06 REMARK 500 VAL A 190 -51.96 64.34 REMARK 500 ASP A 192 -55.93 75.69 REMARK 500 PHE A 437 95.53 -163.28 REMARK 500 PHE A 445 -97.56 -142.86 REMARK 500 VAL A 446 -141.09 -115.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1210 DISTANCE = 5.93 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 601 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 137 OD1 REMARK 620 2 ASP A 444 OD1 79.3 REMARK 620 3 ASP A 444 OD2 127.5 48.9 REMARK 620 4 PHE A 445 O 84.3 77.4 91.2 REMARK 620 5 GLN A 475 OE1 77.7 94.3 95.8 161.3 REMARK 620 6 2OP A 602 O 145.7 132.3 86.3 90.1 107.6 REMARK 620 7 2OP A 602 OHN 77.2 153.3 155.1 87.9 92.8 68.8 REMARK 620 N 1 2 3 4 5 6 DBREF 7E9Y A 2 192 UNP Q5SK82 TLBP_THET8 23 213 DBREF 7E9Y A 0 0 PDB 7E9Y 7E9Y 0 0 DBREF 7E9Y A 442 589 UNP Q5SK82 TLBP_THET8 214 361 SEQADV 7E9Y HIS A -31 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y HIS A -30 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y HIS A -29 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y HIS A -28 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y HIS A -27 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y HIS A -26 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y GLY A -25 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y MET A -24 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y ALA A -23 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y SER A -22 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y MET A -21 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y THR A -20 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y GLY A -19 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y GLY A -18 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y GLN A -17 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y GLN A -16 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y MET A -15 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y GLY A -14 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y ARG A -13 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y ASP A -12 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y LEU A -11 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y TYR A -10 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y ASP A -9 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y ASP A -8 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y ASP A -7 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y ASP A -6 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y LYS A -5 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y ASP A -4 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y PRO A -3 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y SER A -2 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y SER A -1 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y ARG A 0 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y MET A 1 UNP Q5SK82 EXPRESSION TAG SEQADV 7E9Y ASN A 116 UNP Q5SK82 ILE 137 ENGINEERED MUTATION SEQADV 7E9Y THR A 138 UNP Q5SK82 ILE 159 ENGINEERED MUTATION SEQADV 7E9Y ARG A 142 UNP Q5SK82 LYS 163 ENGINEERED MUTATION SEQRES 1 A 619 HIS HIS HIS HIS HIS HIS GLY MET ALA SER MET THR GLY SEQRES 2 A 619 GLY GLN GLN MET GLY ARG ASP LEU TYR ASP ASP ASP ASP SEQRES 3 A 619 LYS ASP PRO SER SER ARG MET PHE SER PRO LEU ALA VAL SEQRES 4 A 619 ALA GLN ALA ARG ARG TYR ARG TRP ARG ILE GLN THR ALA SEQRES 5 A 619 TRP ASP ALA GLY THR VAL GLY TYR SER LEU PHE GLN LYS SEQRES 6 A 619 PHE THR GLU ARG VAL LYS GLU LEU THR ASP GLY GLN LEU SEQRES 7 A 619 GLU VAL GLN PRO PHE PRO ALA GLY ALA VAL VAL GLY THR SEQRES 8 A 619 PHE ASP MET PHE ASP ALA VAL LYS THR GLY VAL LEU ASP SEQRES 9 A 619 GLY MET ASN PRO PHE THR LEU TYR TRP ALA GLY ARG MET SEQRES 10 A 619 PRO VAL THR ALA PHE LEU SER SER TYR ALA LEU GLY LEU SEQRES 11 A 619 ASP ARG PRO ASP GLN TRP GLU THR TRP PHE TYR SER LEU SEQRES 12 A 619 GLY GLY LEU ASP ASN ALA ARG ARG ALA PHE ALA GLU GLN SEQRES 13 A 619 GLY LEU PHE TYR VAL GLY PRO VAL GLN HIS ASP LEU ASN SEQRES 14 A 619 THR ILE HIS SER ARG LYS PRO ILE ARG ARG PHE GLU ASP SEQRES 15 A 619 PHE LYS GLY VAL LYS LEU ARG VAL PRO GLY GLY MET ILE SEQRES 16 A 619 ALA GLU VAL PHE ALA ALA ALA GLY ALA SER THR VAL LEU SEQRES 17 A 619 LEU PRO GLY GLY GLU VAL TYR PRO ALA LEU GLU ARG GLY SEQRES 18 A 619 VAL ILE ASP TRP SER HIS ASN VAL TYR ILE MET ALA ASP SEQRES 19 A 619 LYS GLN ARG ASN GLY ILE LYS ALA ASN PHE GLU ILE ARG SEQRES 20 A 619 HIS ASN ILE GLU ASP GLY GLY VAL GLN LEU ALA TYR HIS SEQRES 21 A 619 TYR GLN GLN ASN THR PRO ILE GLY ASP GLY PRO VAL LEU SEQRES 22 A 619 LEU PRO ASP ASN HIS TYR LEU SER THR GLN THR LYS LEU SEQRES 23 A 619 SER LYS ASP PRO ASN GLU LYS ARG ASP HIS MET VAL LEU SEQRES 24 A 619 LEU GLU PHE VAL THR ALA ALA GLY ILE THR LEU GLY MET SEQRES 25 A 619 ASP GLU LEU TYR LYS GLY GLY THR GLY GLY ARG MET VAL SEQRES 26 A 619 SER LYS GLY GLU GLU LEU PHE THR GLY VAL VAL PRO ILE SEQRES 27 A 619 LEU VAL GLU LEU ASP GLY ASP VAL ASN GLY HIS LYS PHE SEQRES 28 A 619 SER VAL SER GLY GLU GLY GLU GLY ASP ALA THR SER GLY SEQRES 29 A 619 LYS LEU THR LEU LYS PHE ILE CYS THR THR GLY LYS LEU SEQRES 30 A 619 PRO VAL PRO TRP PRO THR LEU VAL THR THR LEU CRO VAL SEQRES 31 A 619 GLN CYS PHE SER ARG TYR PRO ASP HIS MET LYS GLN HIS SEQRES 32 A 619 ASP PHE PHE LYS SER ALA MET PRO GLU GLY TYR ILE GLN SEQRES 33 A 619 GLU ARG THR ILE PHE PHE LYS ASP ASP GLY ASN TYR LYS SEQRES 34 A 619 THR ARG ALA GLU VAL LYS PHE GLU GLY ASP THR LEU VAL SEQRES 35 A 619 ASN ARG ILE GLU LEU LYS GLY ILE ASP PHE LYS GLU ASP SEQRES 36 A 619 GLY ASN ILE LEU GLY HIS LYS LEU GLU TYR SER PHE ASN SEQRES 37 A 619 ASP GLY GLY ALA ALA ASP PHE VAL GLY PRO ALA VAL ASN SEQRES 38 A 619 TYR ASN LEU GLY PHE HIS GLN VAL ALA LYS TYR ILE ILE SEQRES 39 A 619 MET GLY PRO PRO GLU THR PRO ALA ILE HIS GLN PRO VAL SEQRES 40 A 619 ASP LEU MET ASP PHE THR ILE ASN LEU ASN ARG TRP ARG SEQRES 41 A 619 SER LEU PRO LYS PRO LEU GLN GLU ARG PHE ILE ALA ALA SEQRES 42 A 619 VAL HIS GLU TYR SER TRP ILE HIS TYR ALA GLY ILE GLN SEQRES 43 A 619 LYS ALA ASN LEU GLU ALA TRP PRO LYS TYR ARG GLN ALA SEQRES 44 A 619 GLY VAL GLU VAL ILE ARG LEU SER ASN GLU ASP VAL ARG SEQRES 45 A 619 LYS PHE ARG ARG LEU ALA ILE PRO ILE TRP PHE LYS TRP SEQRES 46 A 619 ALA LYS MET ASP LYS TYR SER ARG GLU ALA PHE ALA SER SEQRES 47 A 619 GLN LEU GLU TYR MET LYS GLY ILE GLY TYR VAL THR ASP SEQRES 48 A 619 GLU GLU LEU LYS GLY LEU SER LEU HET CRO A 358 34 HET CA A 601 1 HET 2OP A 602 11 HETNAM CRO {2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(4- HETNAM 2 CRO HYDROXYBENZYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1- HETNAM 3 CRO YL}ACETIC ACID HETNAM CA CALCIUM ION HETNAM 2OP (2S)-2-HYDROXYPROPANOIC ACID HETSYN CRO PEPTIDE DERIVED CHROMOPHORE FORMUL 1 CRO C15 H17 N3 O5 FORMUL 2 CA CA 2+ FORMUL 3 2OP C3 H6 O3 FORMUL 4 HOH *510(H2 O) HELIX 1 AA1 THR A 25 THR A 42 1 18 HELIX 2 AA2 GLY A 58 PHE A 60 5 3 HELIX 3 AA3 ASP A 61 THR A 68 1 8 HELIX 4 AA4 PHE A 77 ALA A 82 5 6 HELIX 5 AA5 MET A 85 LEU A 91 5 7 HELIX 6 AA6 ARG A 100 LEU A 111 1 12 HELIX 7 AA7 GLY A 112 GLU A 123 1 12 HELIX 8 AA8 ARG A 147 LYS A 152 5 6 HELIX 9 AA9 GLY A 160 ALA A 170 1 11 HELIX 10 AB1 PRO A 178 GLY A 180 5 3 HELIX 11 AB2 GLU A 181 ARG A 188 1 8 HELIX 12 AB3 LYS A 203 ASN A 206 5 4 HELIX 13 AB4 LYS A 295 THR A 301 5 7 HELIX 14 AB5 PRO A 348 VAL A 353 5 6 HELIX 15 AB6 VAL A 360 SER A 364 5 5 HELIX 16 AB7 PRO A 367 HIS A 373 5 7 HELIX 17 AB8 ASP A 374 ALA A 379 1 6 HELIX 18 AB9 GLY A 447 LEU A 454 1 8 HELIX 19 AC1 GLY A 455 ALA A 460 1 6 HELIX 20 AC2 LEU A 486 LEU A 492 1 7 HELIX 21 AC3 PRO A 493 ALA A 529 1 37 HELIX 22 AC4 SER A 537 LYS A 557 1 21 HELIX 23 AC5 ASP A 559 ILE A 576 1 18 HELIX 24 AC6 ASP A 581 LYS A 585 5 5 SHEET 1 AA1 5 LEU A 46 PHE A 51 0 SHEET 2 AA1 5 TYR A 13 THR A 19 1 N TYR A 13 O GLU A 47 SHEET 3 AA1 5 GLY A 73 ASN A 75 1 O ASN A 75 N GLN A 18 SHEET 4 AA1 5 MET A 480 ASN A 485 -1 O THR A 483 N MET A 74 SHEET 5 AA1 5 LEU A 126 VAL A 132 -1 N PHE A 127 O ILE A 484 SHEET 1 AA2 6 SER A 173 VAL A 175 0 SHEET 2 AA2 6 LYS A 155 ARG A 157 1 N LEU A 156 O SER A 173 SHEET 3 AA2 6 GLY A 441 ASP A 444 1 O ALA A 442 N LYS A 155 SHEET 4 AA2 6 ILE A 139 SER A 141 -1 N HIS A 140 O ALA A 443 SHEET 5 AA2 6 TYR A 462 MET A 465 -1 O TYR A 462 N SER A 141 SHEET 6 AA2 6 GLU A 532 ARG A 535 1 O ILE A 534 N ILE A 463 SHEET 1 AA312 VAL A 197 ASP A 202 0 SHEET 2 AA312 GLY A 207 ASN A 217 -1 O GLY A 207 N ASP A 202 SHEET 3 AA312 VAL A 223 PRO A 234 -1 O HIS A 228 N PHE A 212 SHEET 4 AA312 TYR A 384 PHE A 392 -1 O PHE A 391 N TYR A 227 SHEET 5 AA312 ASN A 397 GLU A 407 -1 O TYR A 398 N ILE A 390 SHEET 6 AA312 THR A 410 ILE A 420 -1 O VAL A 412 N LYS A 405 SHEET 7 AA312 VAL A 304 VAL A 314 1 N ASP A 313 O GLY A 419 SHEET 8 AA312 HIS A 317 ASP A 328 -1 O PHE A 319 N GLY A 312 SHEET 9 AA312 LYS A 333 CYS A 340 -1 O LYS A 333 N ASP A 328 SHEET 10 AA312 HIS A 264 ALA A 274 -1 N LEU A 267 O LEU A 336 SHEET 11 AA312 HIS A 246 SER A 255 -1 N LYS A 253 O LEU A 268 SHEET 12 AA312 VAL A 197 ASP A 202 -1 N ILE A 199 O HIS A 246 LINK C LEU A 356 N1 CRO A 358 1555 1555 1.34 LINK C3 CRO A 358 N VAL A 360 1555 1555 1.33 LINK OD1 ASN A 137 CA CA A 601 1555 1555 2.44 LINK OD1 ASP A 444 CA CA A 601 1555 1555 2.90 LINK OD2 ASP A 444 CA CA A 601 1555 1555 2.13 LINK O PHE A 445 CA CA A 601 1555 1555 2.31 LINK OE1 GLN A 475 CA CA A 601 1555 1555 2.42 LINK CA CA A 601 O 2OP A 602 1555 1555 2.42 LINK CA CA A 601 OHN 2OP A 602 1555 1555 2.30 CISPEP 1 GLY A 221 GLY A 222 0 -5.49 CISPEP 2 MET A 380 PRO A 381 0 6.41 CRYST1 102.217 104.983 138.748 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009783 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009525 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007207 0.00000